BLASTX nr result

ID: Akebia26_contig00040052 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia26_contig00040052
         (279 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_005645032.1| hypothetical protein COCSUDRAFT_43923 [Cocco...    69   9e-10
ref|XP_005643692.1| hypothetical protein COCSUDRAFT_59631 [Cocco...    62   1e-07
ref|XP_007137414.1| hypothetical protein PHAVU_009G125100g [Phas...    59   9e-07
ref|XP_004970722.1| PREDICTED: photosystem II 22 kDa protein, ch...    58   2e-06
ref|NP_001276237.1| photosystem II 22 kDa protein, chloroplastic...    58   2e-06
ref|XP_002456704.1| hypothetical protein SORBIDRAFT_03g041100 [S...    57   3e-06
tpg|DAA05917.1| TPA_inf: chloroplast photosystem II 22 kDa PsbS ...    57   3e-06
tpg|DAA05916.1| TPA_inf: chloroplast photosystem II 22 kDa PsbS ...    57   3e-06
ref|XP_003523444.1| PREDICTED: photosystem II 22 kDa protein, ch...    56   5e-06
gb|ACU23291.1| unknown [Glycine max]                                   56   5e-06
gb|EXC10209.1| hypothetical protein L484_004387 [Morus notabilis]      56   6e-06
ref|XP_002953446.1| hypothetical protein VOLCADRAFT_94261 [Volvo...    56   6e-06
ref|XP_002955730.1| hypothetical protein VOLCADRAFT_83375 [Volvo...    56   6e-06
tpg|DAA56631.1| TPA: photosystem II protein [Zea mays]                 55   8e-06
ref|XP_003564708.1| PREDICTED: photosystem II 22 kDa protein, ch...    55   8e-06
gb|ABK20973.1| unknown [Picea sitchensis]                              55   8e-06
ref|XP_001689923.1| chloroplast photosystem II-associated 22 kDa...    55   8e-06
ref|XP_001689476.1| chloroplast photosystem II-associated 22 kDa...    55   8e-06
ref|NP_001105228.1| photosystem II subunit PsbS1 [Zea mays] gi|3...    55   8e-06

>ref|XP_005645032.1| hypothetical protein COCSUDRAFT_43923 [Coccomyxa subellipsoidea
           C-169] gi|384247000|gb|EIE20488.1| hypothetical protein
           COCSUDRAFT_43923 [Coccomyxa subellipsoidea C-169]
          Length = 221

 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 39/77 (50%), Positives = 49/77 (63%), Gaps = 6/77 (7%)
 Frame = -3

Query: 214 ALFTKQKSGKTG------YDKSAKEVDPSQPAFTRRRELFVGRLAMVGFASALIGEVATG 53
           +L  K + GK G      YD  AKE +P Q AFTRRRE++VGR AM GF SA+IGE+ TG
Sbjct: 6   SLKPKNQKGKLGNIAKVQYD-DAKETNPLQSAFTRRREIWVGRTAMTGFLSAVIGELLTG 64

Query: 52  KGVIGQLAQELSVSPTV 2
           +G +GQL  E  +   V
Sbjct: 65  RGALGQLQLETRLPQNV 81



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 37/78 (47%), Positives = 48/78 (61%), Gaps = 11/78 (14%)
 Frame = -3

Query: 217 QALFTKQKSGKTGYDKSAKEVDPSQPA----------FTRRRELFVGRLAMVGFASALIG 68
           QA   K+ +G T      K +DPS+PA          FT++ ELFVGR+AM+GFAS LIG
Sbjct: 110 QADVRKRPAGPT-----QKAMDPSKPAEYFGTSKGFGFTKKNELFVGRVAMLGFASELIG 164

Query: 67  EVAT-GKGVIGQLAQELS 17
           EV T GKG +GQ+   L+
Sbjct: 165 EVLTKGKGPLGQIGIPLN 182


>ref|XP_005643692.1| hypothetical protein COCSUDRAFT_59631 [Coccomyxa subellipsoidea
           C-169] gi|384245655|gb|EIE19148.1| hypothetical protein
           COCSUDRAFT_59631 [Coccomyxa subellipsoidea C-169]
          Length = 248

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 38/76 (50%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
 Frame = -3

Query: 232 RCLKVQALFTKQKSGK---TGYDKSAKEVDPSQPAFTRRRELFVGRLAMVGFASALIGEV 62
           R +  QALFT+ K  K   TGYDK A EVDP QPAFTRRRELFV               +
Sbjct: 45  RQITPQALFTRNKEDKGRKTGYDKGAFEVDPIQPAFTRRRELFV---------------I 89

Query: 61  ATGKGVIGQLAQELSV 14
           +TG G +GQL  EL +
Sbjct: 90  STGLGPLGQLQLELGL 105


>ref|XP_007137414.1| hypothetical protein PHAVU_009G125100g [Phaseolus vulgaris]
           gi|561010501|gb|ESW09408.1| hypothetical protein
           PHAVU_009G125100g [Phaseolus vulgaris]
          Length = 269

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 35/83 (42%), Positives = 47/83 (56%), Gaps = 9/83 (10%)
 Frame = -3

Query: 235 PRCLKVQALF---TKQKSGKTGYDKSAKEVDPSQPA------FTRRRELFVGRLAMVGFA 83
           PR     ALF   TK    KT   KS  +V+           FT++ ELFVGR+AM+GFA
Sbjct: 49  PRTFTTLALFKSKTKAPPAKTKVTKSKPKVEDGVFGTSGGFGFTKQNELFVGRVAMLGFA 108

Query: 82  SALIGEVATGKGVIGQLAQELSV 14
           ++L+GE  TGKG++ QL  E  +
Sbjct: 109 ASLLGEAVTGKGILSQLNLETGI 131


>ref|XP_004970722.1| PREDICTED: photosystem II 22 kDa protein, chloroplastic-like
           [Setaria italica]
          Length = 265

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 34/84 (40%), Positives = 47/84 (55%), Gaps = 13/84 (15%)
 Frame = -3

Query: 226 LKVQALFTKQKSGKTGYDKSAKEVDPSQP-------------AFTRRRELFVGRLAMVGF 86
           +K  ALF K K+ K      AK+V   +P              FT+  ELFVGR+AM+GF
Sbjct: 46  VKTLALFGKSKAAKAA---PAKKVAAPKPKVEDGIFGTSGGIGFTKENELFVGRVAMLGF 102

Query: 85  ASALIGEVATGKGVIGQLAQELSV 14
           A++L+GE  TGKG++ QL  E  +
Sbjct: 103 AASLLGEAITGKGILAQLNLETGI 126


>ref|NP_001276237.1| photosystem II 22 kDa protein, chloroplastic-like [Glycine max]
           gi|255638809|gb|ACU19708.1| unknown [Glycine max]
          Length = 273

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 37/97 (38%), Positives = 51/97 (52%), Gaps = 9/97 (9%)
 Frame = -3

Query: 277 SIVPSSPRRLAGPQPRCLKVQALF---TKQKSGKTGYDKSAKEVDPS------QPAFTRR 125
           S  P  P   +   PR     ALF   TK    KT   K  ++V+           FT++
Sbjct: 40  SFNPLPPSTSSFSSPRTFTTLALFKSKTKAAPAKTKVTKPKQKVEDGIFGTSGGFGFTKQ 99

Query: 124 RELFVGRLAMVGFASALIGEVATGKGVIGQLAQELSV 14
            ELFVGR+AM+GFA++L+GE  TGKG++ QL  E  +
Sbjct: 100 NELFVGRVAMLGFAASLLGEGITGKGILAQLNLETGI 136


>ref|XP_002456704.1| hypothetical protein SORBIDRAFT_03g041100 [Sorghum bicolor]
           gi|241928679|gb|EES01824.1| hypothetical protein
           SORBIDRAFT_03g041100 [Sorghum bicolor]
          Length = 268

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 37/98 (37%), Positives = 49/98 (50%), Gaps = 12/98 (12%)
 Frame = -3

Query: 271 VPSSPRRLAGPQPRCLKVQALFTKQKSGKTGYDKSAKEVDPSQPA------------FTR 128
           +PSS       +   +K  ALF K K  KT   K A    P                FT+
Sbjct: 33  LPSSSSGYRHSKSVSVKTLALFGKSKV-KTAPSKKAAAPKPKPKVEDGIFGTSGGIGFTK 91

Query: 127 RRELFVGRLAMVGFASALIGEVATGKGVIGQLAQELSV 14
             ELFVGR+AM+GFA++L+GE  TGKG++ QL  E  +
Sbjct: 92  ENELFVGRVAMLGFAASLLGEAITGKGILAQLNLETGI 129


>tpg|DAA05917.1| TPA_inf: chloroplast photosystem II 22 kDa PsbS protein precursor
           psbS [Acetabularia acetabulum]
          Length = 243

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 27/49 (55%), Positives = 33/49 (67%)
 Frame = -3

Query: 151 PSQPAFTRRRELFVGRLAMVGFASALIGEVATGKGVIGQLAQELSVSPT 5
           P    FT+  ELFVGRLAM+GFASA+IGE+ TGKG + Q   E  +  T
Sbjct: 62  PVTLGFTKSNELFVGRLAMIGFASAIIGELLTGKGALAQFGLETGIPIT 110


>tpg|DAA05916.1| TPA_inf: chloroplast photosystem II 22 kDa PsbS protein precursor
           psbS [Acetabularia acetabulum]
          Length = 242

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 27/49 (55%), Positives = 33/49 (67%)
 Frame = -3

Query: 151 PSQPAFTRRRELFVGRLAMVGFASALIGEVATGKGVIGQLAQELSVSPT 5
           P    FT+  ELFVGRLAM+GFASA+IGE+ TGKG + Q   E  +  T
Sbjct: 62  PVTLGFTKSNELFVGRLAMIGFASAIIGELLTGKGALAQFGLETGIPIT 110


>ref|XP_003523444.1| PREDICTED: photosystem II 22 kDa protein, chloroplastic-like
           [Glycine max]
          Length = 273

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 37/95 (38%), Positives = 52/95 (54%), Gaps = 9/95 (9%)
 Frame = -3

Query: 271 VPSSPRRLAGPQPRCLKVQALF---TKQKSGKTGYDKSAKEVDPS------QPAFTRRRE 119
           +PSS    + P  R     ALF   TK    KT   K  ++V+           FT++ E
Sbjct: 44  LPSSTSSFSSP--RTFTTLALFKSKTKAAPAKTKVTKPKQKVEDGIFGTSGGFGFTKQNE 101

Query: 118 LFVGRLAMVGFASALIGEVATGKGVIGQLAQELSV 14
           LFVGR+AM+GFA++L+GE  TGKG++ QL  E  +
Sbjct: 102 LFVGRVAMLGFAASLLGEGITGKGILAQLNLETGI 136


>gb|ACU23291.1| unknown [Glycine max]
          Length = 273

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 37/95 (38%), Positives = 52/95 (54%), Gaps = 9/95 (9%)
 Frame = -3

Query: 271 VPSSPRRLAGPQPRCLKVQALF---TKQKSGKTGYDKSAKEVDPS------QPAFTRRRE 119
           +PSS    + P  R     ALF   TK    KT   K  ++V+           FT++ E
Sbjct: 44  LPSSTSSFSSP--RTFTTLALFKSKTKAAPAKTKVTKPKQKVEDGIFGTSGGFGFTKQNE 101

Query: 118 LFVGRLAMVGFASALIGEVATGKGVIGQLAQELSV 14
           LFVGR+AM+GFA++L+GE  TGKG++ QL  E  +
Sbjct: 102 LFVGRVAMLGFAASLLGEGITGKGILAQLNLETGI 136


>gb|EXC10209.1| hypothetical protein L484_004387 [Morus notabilis]
          Length = 280

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 24/41 (58%), Positives = 33/41 (80%)
 Frame = -3

Query: 136 FTRRRELFVGRLAMVGFASALIGEVATGKGVIGQLAQELSV 14
           FT++ ELFVGR+AM+GFA+AL+GE  TGKG++ QL  E  +
Sbjct: 100 FTKQNELFVGRVAMIGFAAALLGEAITGKGILSQLNLETGI 140


>ref|XP_002953446.1| hypothetical protein VOLCADRAFT_94261 [Volvox carteri f.
           nagariensis] gi|300261205|gb|EFJ45419.1| hypothetical
           protein VOLCADRAFT_94261 [Volvox carteri f. nagariensis]
          Length = 316

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 25/43 (58%), Positives = 34/43 (79%)
 Frame = -3

Query: 136 FTRRRELFVGRLAMVGFASALIGEVATGKGVIGQLAQELSVSP 8
           FT+R ELF GRLAM+GFA+A++GE+ TG+G + QLA  L + P
Sbjct: 233 FTKRNELFHGRLAMLGFAAAVVGELKTGRGALSQLAGYLGIIP 275


>ref|XP_002955730.1| hypothetical protein VOLCADRAFT_83375 [Volvox carteri f.
           nagariensis] gi|300258923|gb|EFJ43155.1| hypothetical
           protein VOLCADRAFT_83375 [Volvox carteri f. nagariensis]
          Length = 241

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 26/47 (55%), Positives = 34/47 (72%)
 Frame = -3

Query: 151 PSQPAFTRRRELFVGRLAMVGFASALIGEVATGKGVIGQLAQELSVS 11
           P +  FT+  ELFVGRLAM+GFAS+LIGE+ TGKG + Q   E  ++
Sbjct: 59  PIKLGFTKTNELFVGRLAMLGFASSLIGEILTGKGPLAQFGYETGLN 105


>tpg|DAA56631.1| TPA: photosystem II protein [Zea mays]
          Length = 272

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 39/101 (38%), Positives = 51/101 (50%), Gaps = 15/101 (14%)
 Frame = -3

Query: 271 VPSSPRRLAG---PQPRCLKVQALFTKQKSGKTGYDKSAKEVDPSQPA------------ 137
           +PSS    AG    +   +K  ALF K K  KT   K A    P                
Sbjct: 34  LPSSSSSSAGYRHSKSVSVKTLALFGKSKV-KTAPAKKAAAPKPKPKVEDGIFGTSGGIG 92

Query: 136 FTRRRELFVGRLAMVGFASALIGEVATGKGVIGQLAQELSV 14
           FT+  ELFVGR+AM+GFA++L+GE  TGKG++ QL  E  +
Sbjct: 93  FTKENELFVGRVAMLGFAASLLGEAITGKGILAQLNLETGI 133


>ref|XP_003564708.1| PREDICTED: photosystem II 22 kDa protein, chloroplastic-like
           [Brachypodium distachyon]
          Length = 269

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 9/95 (9%)
 Frame = -3

Query: 271 VPSSPRRLAGPQPRCLKVQALFTKQKSGKTGYDKSAKEVDPSQPA---------FTRRRE 119
           +P+SP          ++  A+F K K+      K A     ++           FT+  E
Sbjct: 36  LPASPSYYKHMPSLSVRTMAIFGKSKAKAAPAKKVAAPKPKTEDGIFGTSGGIGFTKENE 95

Query: 118 LFVGRLAMVGFASALIGEVATGKGVIGQLAQELSV 14
           LFVGR+AM+GFA++++GE  TGKG++ QL  E  +
Sbjct: 96  LFVGRVAMIGFAASILGEAITGKGILSQLNLETGI 130


>gb|ABK20973.1| unknown [Picea sitchensis]
          Length = 297

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 34/94 (36%), Positives = 49/94 (52%), Gaps = 16/94 (17%)
 Frame = -3

Query: 247 AGPQPRCLKVQALFTKQ-------KSGKTGYDKSAKEVDPSQPA---------FTRRREL 116
           AG   R  + +ALF  +       K G+TG     +E    +           FT+  EL
Sbjct: 62  AGLNARIARTEALFRPKEKAAAPPKKGRTGRVALPEEKPKVEDGIFGTSGGIGFTKANEL 121

Query: 115 FVGRLAMVGFASALIGEVATGKGVIGQLAQELSV 14
           FVGR+AM+GFA++L+GE  TGKG++ QL  E  +
Sbjct: 122 FVGRVAMIGFAASLLGEAITGKGILSQLNLETGI 155


>ref|XP_001689923.1| chloroplast photosystem II-associated 22 kDa protein [Chlamydomonas
           reinhardtii] gi|158283911|gb|EDP09661.1| chloroplast
           photosystem II-associated 22 kDa protein [Chlamydomonas
           reinhardtii]
          Length = 245

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 25/47 (53%), Positives = 34/47 (72%)
 Frame = -3

Query: 151 PSQPAFTRRRELFVGRLAMVGFASALIGEVATGKGVIGQLAQELSVS 11
           P +  FT+  ELFVGRLAMVGF+++LIGE+ TGKG + Q   E  ++
Sbjct: 61  PLKLGFTKTNELFVGRLAMVGFSASLIGEILTGKGALAQFGYETGLN 107


>ref|XP_001689476.1| chloroplast photosystem II-associated 22 kDa protein [Chlamydomonas
           reinhardtii] gi|158283464|gb|EDP09214.1| chloroplast
           photosystem II-associated 22 kDa protein [Chlamydomonas
           reinhardtii]
          Length = 245

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 25/47 (53%), Positives = 34/47 (72%)
 Frame = -3

Query: 151 PSQPAFTRRRELFVGRLAMVGFASALIGEVATGKGVIGQLAQELSVS 11
           P +  FT+  ELFVGRLAMVGF+++LIGE+ TGKG + Q   E  ++
Sbjct: 61  PLKLGFTKTNELFVGRLAMVGFSASLIGEILTGKGALAQFGYETGLN 107


>ref|NP_001105228.1| photosystem II subunit PsbS1 [Zea mays] gi|33867383|gb|AAQ55066.1|
           photosystem II subunit PsbS precursor [Zea mays]
          Length = 265

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 39/101 (38%), Positives = 51/101 (50%), Gaps = 15/101 (14%)
 Frame = -3

Query: 271 VPSSPRRLAG---PQPRCLKVQALFTKQKSGKTGYDKSAKEVDPSQPA------------ 137
           +PSS    AG    +   +K  ALF K K  KT   K A    P                
Sbjct: 27  LPSSSSSSAGYRHSKSVSVKTLALFGKSKV-KTAPAKKAAAPKPKPKVEDGIFGTSGGIG 85

Query: 136 FTRRRELFVGRLAMVGFASALIGEVATGKGVIGQLAQELSV 14
           FT+  ELFVGR+AM+GFA++L+GE  TGKG++ QL  E  +
Sbjct: 86  FTKENELFVGRVAMLGFAASLLGEAITGKGILAQLNLETGI 126


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