BLASTX nr result

ID: Akebia26_contig00039961 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia26_contig00039961
         (320 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD95408.1| hypothetical protein [Arabidopsis thaliana]            60   3e-07
gb|ABW81051.1| tn7 reverse transcriptase [Arabidopsis lyrata sub...    59   5e-07
gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thal...    56   1e-06
dbj|BAB08692.1| non-LTR retroelement reverse transcriptase-like ...    57   2e-06
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...    52   4e-06
gb|AAD24652.1| putative non-LTR retroelement reverse transcripta...    55   5e-06
gb|AAF79288.1|AC068602_11 F14D16.18 [Arabidopsis thaliana]             54   5e-06
dbj|BAB01344.1| reverse transcriptase-like protein [Arabidopsis ...    53   8e-06

>dbj|BAD95408.1| hypothetical protein [Arabidopsis thaliana]
          Length = 478

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
 Frame = -1

Query: 281 KTEGGLGIKTLSEVHKTGLMKTCWKLTTEKGLWVDHLKKKYVKDGNWWFPS--NTRGSKL 108
           K EGGLGI++L E +K  L+K  W++ +   LWV  L+   ++ G++W  S   T GS +
Sbjct: 125 KDEGGLGIRSLKEANKVSLLKLIWRMLSSTSLWVQWLRLYLLRKGSFWSISGNTTLGSWM 184

Query: 107 WRTIRSFLKPTINLTKRLIGDGATSSLF*LNW 12
           W+ I           K  I +G+ +S +  NW
Sbjct: 185 WKKILKHRALASGFVKHDIHNGSNTSFWFDNW 216


>gb|ABW81051.1| tn7 reverse transcriptase [Arabidopsis lyrata subsp. lyrata]
          Length = 441

 Score = 58.9 bits (141), Expect(2) = 5e-07
 Identities = 29/92 (31%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
 Frame = -1

Query: 281 KTEGGLGIKTLSEVHKTGLMKTCWKLTTEKGLWVDHLKKKYVKDGNWWF--PSNTRGSKL 108
           K EGGLG+++L+E +K   +K  W+L +   LWV  L++  ++ G++W    ++T GS +
Sbjct: 89  KEEGGLGLRSLTEANKVCCLKLIWRLLSSSSLWVQWLRQYVIRKGSFWSLRDTSTLGSWM 148

Query: 107 WRTIRSFLKPTINLTKRLIGDGATSSLF*LNW 12
           WR +  +       T+  I +G   S +  NW
Sbjct: 149 WRKLLKYRHLASGFTQYEIRNGKGVSFWHDNW 180



 Score = 20.4 bits (41), Expect(2) = 5e-07
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -2

Query: 319 KNHLVVWHKVCKPKQK 272
           K   V W+ VC PK++
Sbjct: 76  KKAKVSWNDVCMPKEE 91


>gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thaliana]
          Length = 629

 Score = 55.8 bits (133), Expect(2) = 1e-06
 Identities = 27/95 (28%), Positives = 55/95 (57%), Gaps = 3/95 (3%)
 Frame = -1

Query: 281 KTEGGLGIKTLSEVHKTGLMKTCWKLTT-EKGLWVDHLKKKYVKDGNWW--FPSNTRGSK 111
           K EGGLG+++L+E +   ++K  W++T+ +  LWV   K   +K  ++W   P+++ GS 
Sbjct: 274 KQEGGLGLRSLTEANVVSVLKLIWRVTSNDDSLWVKWSKMNLLKQESFWSLTPNSSLGSW 333

Query: 110 LWRTIRSFLKPTINLTKRLIGDGATSSLF*LNWRG 6
           +W+ +  + +     ++  + +GA +S +  NW G
Sbjct: 334 MWKKMLKYRETAKPFSRVEVNNGARTSFWFDNWSG 368



 Score = 22.3 bits (46), Expect(2) = 1e-06
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -2

Query: 307 VVWHKVCKPKQK 272
           V W  +CKPKQ+
Sbjct: 265 VSWDDICKPKQE 276


>dbj|BAB08692.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana] gi|93007380|gb|ABE97193.1|
           hypothetical protein At5g13655 [Arabidopsis thaliana]
          Length = 385

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 29/93 (31%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
 Frame = -1

Query: 281 KTEGGLGIKTLSEVHKTGLMKTCWKLTTEKG-LWVDHLKKKYVKDGNWWFPSNT--RGSK 111
           K+EGGLG++ + E +K  ++K  W++ + KG LWVD +KK  ++ G+ W    T  RGS 
Sbjct: 28  KSEGGLGLRAVEETNKVCMLKLIWRILSAKGSLWVDWVKKHLLRGGSLWAVKETSSRGSW 87

Query: 110 LWRTIRSFLKPTINLTKRLIGDGATSSLF*LNW 12
           +W+ +  +        K  + +G ++S +  +W
Sbjct: 88  IWKKLLKYRDKAKCFHKVDVRNGESTSFWYDSW 120


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score = 52.4 bits (124), Expect(2) = 4e-06
 Identities = 26/93 (27%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
 Frame = -1

Query: 281  KTEGGLGIKTLSEVHKTGLMKTCWKLTT-EKGLWVDHLKKKYVKDGNWWFPSNT--RGSK 111
            K EGGLG+++L E +    +K  WK+ +    LWV  + +  +++ ++W    T  +GS 
Sbjct: 869  KDEGGLGLRSLKEANDVCCLKLVWKIVSHSNSLWVKWVDQHLLRNASFWEVKQTVSQGSW 928

Query: 110  LWRTIRSFLKPTINLTKRLIGDGATSSLF*LNW 12
            +W+ +  + +    L+K  +G+G  +S +  NW
Sbjct: 929  IWKKLLKYREVAKTLSKVEVGNGKQTSFWYDNW 961



 Score = 23.9 bits (50), Expect(2) = 4e-06
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -2

Query: 307 VVWHKVCKPKQK 272
           + WH VCKPK +
Sbjct: 860 ISWHMVCKPKDE 871


>gb|AAD24652.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 977

 Score = 54.7 bits (130), Expect(2) = 5e-06
 Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
 Frame = -1

Query: 281  KTEGGLGIKTLSEVHKTGLMKTCWKLTTE-KGLWVDHLKKKYVKDGNWWF--PSNTRGSK 111
            K EGGLG+++L E +    +K  WK+ +    LWV  ++K  +K+  +WF   + T GS 
Sbjct: 826  KKEGGLGLRSLKEANDVCCLKVVWKIVSHGNSLWVKWIEKFLLKNETFWFVKENTTLGSW 885

Query: 110  LWRTIRSFLKPTINLTKRLIGDGATSSLF*LNW 12
            +WR +  F +   N  K  +  G  +S +  +W
Sbjct: 886  MWRKLIKFREKAKNFCKVEVNKGNCTSFWYDDW 918



 Score = 21.2 bits (43), Expect(2) = 5e-06
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -2

Query: 307 VVWHKVCKPKQK 272
           V W  VCKPK++
Sbjct: 817 VSWDDVCKPKKE 828


>gb|AAF79288.1|AC068602_11 F14D16.18 [Arabidopsis thaliana]
          Length = 582

 Score = 53.5 bits (127), Expect(2) = 5e-06
 Identities = 26/87 (29%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
 Frame = -1

Query: 281 KTEGGLGIKTLSEVHKTGLMKTCWK-LTTEKGLWVDHLKKKYVKDGNWWF--PSNTRGSK 111
           K EGGLG+++++E +K  ++K  W+ L+  + LWV+ +KK  ++ G++W    + T GS 
Sbjct: 213 KQEGGLGLRSIAEANKVCVLKLIWRILSARRSLWVELVKKYLIRRGSFWLVKENTTCGSW 272

Query: 110 LWRTIRSFLKPTINLTKRLIGDGATSS 30
           +W+ I  +     +  +  + +G  SS
Sbjct: 273 IWKKILKYRDTAKSFYRVEVRNGEASS 299



 Score = 22.3 bits (46), Expect(2) = 5e-06
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -2

Query: 307 VVWHKVCKPKQK 272
           V W +VC PKQ+
Sbjct: 204 VAWSEVCSPKQE 215


>dbj|BAB01344.1| reverse transcriptase-like protein [Arabidopsis thaliana]
          Length = 1115

 Score = 53.1 bits (126), Expect(2) = 8e-06
 Identities = 25/93 (26%), Positives = 54/93 (58%), Gaps = 3/93 (3%)
 Frame = -1

Query: 275  EGGLGIKTLSEVHKTGLMKTCWKLTT-EKGLWVDHLKKKYVKDGNWWF--PSNTRGSKLW 105
            +GGLG+++L+E +   ++K  W++T+ +  LWV   K   +K  ++W   P+++ GS +W
Sbjct: 787  QGGLGLRSLTEANVVSVLKLIWRVTSNDDSLWVKWSKMNLLKQESFWSLKPNSSLGSWMW 846

Query: 104  RTIRSFLKPTINLTKRLIGDGATSSLF*LNWRG 6
            + +  + +     ++  + +GA +S +  NW G
Sbjct: 847  KKMLKYRETAKPFSRVEVNNGARTSFWFDNWSG 879



 Score = 21.9 bits (45), Expect(2) = 8e-06
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -2

Query: 307 VVWHKVCKPKQ 275
           V W  +CKPKQ
Sbjct: 777 VSWDDICKPKQ 787


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