BLASTX nr result
ID: Akebia26_contig00038280
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia26_contig00038280
(472 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse tr... 64 2e-19
gb|EXC17267.1| DNA-directed RNA polymerase II subunit [Morus not... 72 3e-18
gb|EMS56299.1| Polycomb group protein EMBRYONIC FLOWER 2 [Tritic... 63 7e-18
gb|EMS59319.1| V-type proton ATPase subunit B 2 [Triticum urartu] 62 1e-17
gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptas... 65 2e-17
gb|EMT14674.1| Methyltransferase-like protein 13 [Aegilops tausc... 60 4e-17
gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea] 64 3e-16
emb|CCH50954.1| T1.2 [Malus x robusta] 61 4e-16
gb|EMT12744.1| Exostosin-1 [Aegilops tauschii] 60 3e-15
gb|ABB00038.1| reverse transcriptase family member [Glycine max] 76 6e-14
gb|EMT31975.1| Retrovirus-related Pol polyprotein LINE-1 [Aegilo... 59 2e-12
ref|XP_006010506.1| PREDICTED: uncharacterized protein LOC102366... 52 2e-12
emb|CCH50976.1| T4.15 [Malus x robusta] 57 5e-12
ref|XP_003590997.1| Myosin XI [Medicago truncatula] gi|355480045... 51 1e-11
gb|EMS61456.1| Protein HASTY 1 [Triticum urartu] 53 1e-11
emb|CDJ90320.1| RNA-directed DNA polymerase (reverse transcripta... 52 5e-11
gb|EXC31207.1| DNA ligase 4 [Morus notabilis] 72 6e-11
emb|CBA11992.1| endonuclease-reverse transcriptase HmRTE-e01 [He... 56 8e-11
emb|CDJ80644.1| Endonuclease exonuclease phosphatase and RNA-dir... 53 2e-10
emb|CDJ92648.1| RNA-directed DNA polymerase (reverse transcripta... 52 4e-10
>emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse transcriptase) [Malus
domestica]
Length = 622
Score = 64.3 bits (155), Expect(2) = 2e-19
Identities = 30/74 (40%), Positives = 47/74 (63%)
Frame = -1
Query: 322 VYIIFIDLEKAYRKVPKELNW*VLGKKGILNGYIDTIKGMYERVVNSVSENGEKKNMIPV 143
++++FIDLEKAY +V +++ W +L KKG+ YI IK MYE +V + P+
Sbjct: 302 LHMVFIDLEKAYDRVSRDIIWRILEKKGVRVAYIQAIKDMYEGAKTAVRTYEGQTESFPI 361
Query: 142 TIGLHLRATLSLYV 101
T+GLH ++LS Y+
Sbjct: 362 TVGLHQGSSLSPYL 375
Score = 56.6 bits (135), Expect(2) = 2e-19
Identities = 26/39 (66%), Positives = 32/39 (82%)
Frame = -2
Query: 471 KLWERAIEKMLRQKTDISNNQFYLMPGRSTMKAIFLLTK 355
KLWER IE LRQ+T +S+NQF MPGRSTM+AI+LL +
Sbjct: 252 KLWERVIEHRLRQETRVSDNQFGFMPGRSTMEAIYLLRR 290
>gb|EXC17267.1| DNA-directed RNA polymerase II subunit [Morus notabilis]
Length = 588
Score = 72.0 bits (175), Expect(2) = 3e-18
Identities = 38/78 (48%), Positives = 48/78 (61%)
Frame = -1
Query: 337 EKGGSVYIIFIDLEKAYRKVPKELNW*VLGKKGILNGYIDTIKGMYERVVNSVSENGEKK 158
E +YI+FIDLEKAY +VP+E+ W VL KKG+ YI IK MY+ VV SV G
Sbjct: 301 ETNTDLYIVFIDLEKAYDRVPREVLWWVLEKKGVHVRYIKVIKDMYDGVVTSVRTVGGYT 360
Query: 157 NMIPVTIGLHLRATLSLY 104
P+ + LH R+ LS Y
Sbjct: 361 AKFPIWVDLHQRSALSPY 378
Score = 45.4 bits (106), Expect(2) = 3e-18
Identities = 23/37 (62%), Positives = 26/37 (70%)
Frame = -2
Query: 471 KLWERAIEKMLRQKTDISNNQFYLMPGRSTMKAIFLL 361
KL ER IE+ LR IS NQF MPG+ST +AIFLL
Sbjct: 256 KLLERVIERRLRATATISGNQFGFMPGKSTTEAIFLL 292
>gb|EMS56299.1| Polycomb group protein EMBRYONIC FLOWER 2 [Triticum urartu]
Length = 974
Score = 62.8 bits (151), Expect(2) = 7e-18
Identities = 32/79 (40%), Positives = 47/79 (59%)
Frame = -1
Query: 337 EKGGSVYIIFIDLEKAYRKVPKELNW*VLGKKGILNGYIDTIKGMYERVVNSVSENGEKK 158
E+ ++++FIDLEKAY K+P+ + W L K + YI IK MY+ VV SV +
Sbjct: 82 EQKKDLHMVFIDLEKAYDKIPRNVMWWALEKHKVPTKYITLIKDMYDNVVTSVRTSDVDI 141
Query: 157 NMIPVTIGLHLRATLSLYV 101
+ P+ IGLH + LS Y+
Sbjct: 142 DDFPIKIGLHQGSALSPYL 160
Score = 53.1 bits (126), Expect(2) = 7e-18
Identities = 24/37 (64%), Positives = 29/37 (78%)
Frame = -2
Query: 471 KLWERAIEKMLRQKTDISNNQFYLMPGRSTMKAIFLL 361
KLWER IE LR+ T ++ NQF MPGRSTM+AIFL+
Sbjct: 37 KLWERVIEHRLRRMTSVTKNQFGFMPGRSTMEAIFLV 73
>gb|EMS59319.1| V-type proton ATPase subunit B 2 [Triticum urartu]
Length = 605
Score = 62.0 bits (149), Expect(2) = 1e-17
Identities = 37/104 (35%), Positives = 56/104 (53%), Gaps = 6/104 (5%)
Frame = -1
Query: 337 EKGGSVYIIFIDLEKAYRKVPKELNW*VLGKKGILNGYIDTIKGMYERVVNSVSENGEKK 158
E+ ++++FIDLEK+Y K+P+ + W L K + YI IK MY+ VV SV +
Sbjct: 116 EQKKDLHMVFIDLEKSYDKIPRNVMWWALKKHKVPAKYITLIKDMYDNVVTSVRTSDVDT 175
Query: 157 NMIPVTIGLHLRATLSLYVL------I*LQIK**LSWE*SFADD 44
+ P+ IGLH + LS Y+ + I+ + W FADD
Sbjct: 176 DDFPIKIGLHQGSALSPYLFALVMDEVTRDIQGDIPWCMLFADD 219
Score = 53.1 bits (126), Expect(2) = 1e-17
Identities = 24/37 (64%), Positives = 29/37 (78%)
Frame = -2
Query: 471 KLWERAIEKMLRQKTDISNNQFYLMPGRSTMKAIFLL 361
KLWER IE LR+ T ++ NQF MPGRSTM+AIFL+
Sbjct: 71 KLWERVIEHRLRRMTSVTKNQFGFMPGRSTMEAIFLV 107
>gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
truncatula]
Length = 517
Score = 65.5 bits (158), Expect(2) = 2e-17
Identities = 32/74 (43%), Positives = 44/74 (59%)
Frame = -1
Query: 322 VYIIFIDLEKAYRKVPKELNW*VLGKKGILNGYIDTIKGMYERVVNSVSENGEKKNMIPV 143
++++F DLEK Y +VP+E+ W L KK + YI IK MYER SV P+
Sbjct: 280 LHLVFFDLEKGYDRVPREILWKALEKKRVRIAYIRAIKDMYERASTSVKTQDGTTEDFPI 339
Query: 142 TIGLHLRATLSLYV 101
TIGLH +TL+ Y+
Sbjct: 340 TIGLHQGSTLTPYL 353
Score = 48.9 bits (115), Expect(2) = 2e-17
Identities = 22/39 (56%), Positives = 32/39 (82%)
Frame = -2
Query: 471 KLWERAIEKMLRQKTDISNNQFYLMPGRSTMKAIFLLTK 355
KLWER I++ LR++T +++NQF M GRSTM+AI+LL +
Sbjct: 230 KLWERVIKRRLRKETLVTDNQFGFMLGRSTMEAIYLLQR 268
>gb|EMT14674.1| Methyltransferase-like protein 13 [Aegilops tauschii]
Length = 1134
Score = 60.5 bits (145), Expect(2) = 4e-17
Identities = 39/104 (37%), Positives = 55/104 (52%), Gaps = 6/104 (5%)
Frame = -1
Query: 337 EKGGSVYIIFIDLEKAYRKVPKELNW*VLGKKGILNGYIDTIKGMYERVVNSVSENGEKK 158
E+ ++++FIDLEKAY K+P+ L W L K + YI IK MY+ V SV +
Sbjct: 446 EQKKDLHMVFIDLEKAYNKIPRNLWW-ALDKHKVPAKYITLIKDMYDNAVTSVRTSDIDT 504
Query: 157 NMIPVTIGLHLRATLSLYVLI*L------QIK**LSWE*SFADD 44
+ P+ IGLH + LS Y+ L I+ + W FADD
Sbjct: 505 DDFPIKIGLHQGSALSPYLFALLMDEVTRDIQGDIPWCMLFADD 548
Score = 53.1 bits (126), Expect(2) = 4e-17
Identities = 24/37 (64%), Positives = 29/37 (78%)
Frame = -2
Query: 471 KLWERAIEKMLRQKTDISNNQFYLMPGRSTMKAIFLL 361
KLWER IE LR+ T ++ NQF MPGRSTM+AIFL+
Sbjct: 401 KLWERVIEHRLRRMTSVTKNQFGFMPGRSTMEAIFLV 437
>gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea]
Length = 562
Score = 63.5 bits (153), Expect(2) = 3e-16
Identities = 32/74 (43%), Positives = 45/74 (60%)
Frame = -1
Query: 322 VYIIFIDLEKAYRKVPKELNW*VLGKKGILNGYIDTIKGMYERVVNSVSENGEKKNMIPV 143
++++FIDLEKAY +VP+E+ W VL K + YI IK MY+ SV G P+
Sbjct: 192 LHMVFIDLEKAYDRVPREVLWKVLEKMRVRIAYIRAIKDMYDGATTSVKTQGGVTEEFPI 251
Query: 142 TIGLHLRATLSLYV 101
IGLH ++LS Y+
Sbjct: 252 GIGLHQGSSLSPYL 265
Score = 47.0 bits (110), Expect(2) = 3e-16
Identities = 21/39 (53%), Positives = 29/39 (74%)
Frame = -2
Query: 471 KLWERAIEKMLRQKTDISNNQFYLMPGRSTMKAIFLLTK 355
KLWER IE+ LR++T ++ NQF M GRS +AI+LL +
Sbjct: 142 KLWERVIERGLRKETQVTENQFGFMSGRSITEAIYLLRR 180
>emb|CCH50954.1| T1.2 [Malus x robusta]
Length = 554
Score = 60.8 bits (146), Expect(2) = 4e-16
Identities = 28/74 (37%), Positives = 46/74 (62%)
Frame = -1
Query: 322 VYIIFIDLEKAYRKVPKELNW*VLGKKGILNGYIDTIKGMYERVVNSVSENGEKKNMIPV 143
++++FIDLEK Y +VP+++ W +L KKG+ YI IK MY+ +V + P+
Sbjct: 321 LHMVFIDLEKVYDRVPRDILWRILEKKGVRVAYIQAIKDMYDGAKTAVRTYEGQIESFPI 380
Query: 142 TIGLHLRATLSLYV 101
T+ LH ++LS Y+
Sbjct: 381 TVRLHQGSSLSPYL 394
Score = 49.3 bits (116), Expect(2) = 4e-16
Identities = 25/39 (64%), Positives = 29/39 (74%)
Frame = -2
Query: 471 KLWERAIEKMLRQKTDISNNQFYLMPGRSTMKAIFLLTK 355
KL R IE LRQKT +S+NQF MPG STM+AI+LL K
Sbjct: 271 KLLARVIEHRLRQKTRVSDNQFKFMPGCSTMEAIYLLRK 309
>gb|EMT12744.1| Exostosin-1 [Aegilops tauschii]
Length = 549
Score = 60.1 bits (144), Expect(2) = 3e-15
Identities = 28/75 (37%), Positives = 46/75 (61%)
Frame = -1
Query: 325 SVYIIFIDLEKAYRKVPKELNW*VLGKKGILNGYIDTIKGMYERVVNSVSENGEKKNMIP 146
+++++FIDLEKAY K+P+ + W L K + YI I+ M++ +V SV + + P
Sbjct: 469 ALHMVFIDLEKAYNKIPRNVMWWALEKHKVPAKYITLIRNMHDNIVTSVRTSDGDTDDFP 528
Query: 145 VTIGLHLRATLSLYV 101
+ IGLH + LS Y+
Sbjct: 529 IKIGLHQGSALSPYL 543
Score = 47.0 bits (110), Expect(2) = 3e-15
Identities = 21/37 (56%), Positives = 26/37 (70%)
Frame = -2
Query: 471 KLWERAIEKMLRQKTDISNNQFYLMPGRSTMKAIFLL 361
KLWER IE LR T ++ NQF +PGRS M+ IFL+
Sbjct: 421 KLWERVIEHRLRSMTSMTKNQFGFVPGRSIMEVIFLI 457
>gb|ABB00038.1| reverse transcriptase family member [Glycine max]
Length = 377
Score = 75.9 bits (185), Expect(2) = 6e-14
Identities = 37/74 (50%), Positives = 51/74 (68%)
Frame = -1
Query: 322 VYIIFIDLEKAYRKVPKELNW*VLGKKGILNGYIDTIKGMYERVVNSVSENGEKKNMIPV 143
+++IFIDLEKAY +VP+E+ W L KKG+ YI I+ MY+RV SV G + + P+
Sbjct: 27 LHLIFIDLEKAYDRVPREILWKALEKKGVRVAYIRAIQDMYDRVSTSVRTQGGESDDFPI 86
Query: 142 TIGLHLRATLSLYV 101
TIGLH +TLS Y+
Sbjct: 87 TIGLHQGSTLSPYL 100
Score = 26.9 bits (58), Expect(2) = 6e-14
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -2
Query: 399 MPGRSTMKAIFLLTK 355
MPGRSTM+AI+LL +
Sbjct: 1 MPGRSTMEAIYLLRR 15
>gb|EMT31975.1| Retrovirus-related Pol polyprotein LINE-1 [Aegilops tauschii]
Length = 1186
Score = 58.5 bits (140), Expect(2) = 2e-12
Identities = 29/73 (39%), Positives = 43/73 (58%)
Frame = -1
Query: 322 VYIIFIDLEKAYRKVPKELNW*VLGKKGILNGYIDTIKGMYERVVNSVSENGEKKNMIPV 143
++++FIDLEKAY K+P + W L K + YI IKG+Y+ V+ SV + + + +
Sbjct: 159 LHMVFIDLEKAYDKIPWNVMWWALEKHKVPTKYISLIKGIYDNVLTSVQTSDDDTDDFLI 218
Query: 142 TIGLHLRATLSLY 104
IGLH LS Y
Sbjct: 219 KIGLHQALALSPY 231
Score = 39.3 bits (90), Expect(2) = 2e-12
Identities = 21/34 (61%), Positives = 26/34 (76%)
Frame = -2
Query: 462 ERAIEKMLRQKTDISNNQFYLMPGRSTMKAIFLL 361
ERAIE LR T ++N QF MPGRST++AIFL+
Sbjct: 114 ERAIEHHLRGMTSVTN-QFGFMPGRSTIEAIFLV 146
>ref|XP_006010506.1| PREDICTED: uncharacterized protein LOC102366231 [Latimeria
chalumnae]
Length = 1500
Score = 51.6 bits (122), Expect(2) = 2e-12
Identities = 28/81 (34%), Positives = 44/81 (54%)
Frame = -1
Query: 337 EKGGSVYIIFIDLEKAYRKVPKELNW*VLGKKGILNGYIDTIKGMYERVVNSVSENGEKK 158
EK ++++F+DLEKAY +VP+ L W + K+GI YI +K MY+ V
Sbjct: 494 EKRKDLHMVFVDLEKAYDRVPRGLIWWCMRKRGIPEVYIRLVKDMYQGSKIWVRSACGTT 553
Query: 157 NMIPVTIGLHLRATLSLYVLI 95
PV +G+ + LS ++ I
Sbjct: 554 TSFPVKVGVRQGSALSPFLFI 574
Score = 45.8 bits (107), Expect(2) = 2e-12
Identities = 23/37 (62%), Positives = 25/37 (67%)
Frame = -2
Query: 471 KLWERAIEKMLRQKTDISNNQFYLMPGRSTMKAIFLL 361
KLWER IEK LR+ IS NQF GRST+ AIF L
Sbjct: 449 KLWERIIEKRLRKLVQISENQFGFCQGRSTIDAIFAL 485
>emb|CCH50976.1| T4.15 [Malus x robusta]
Length = 986
Score = 56.6 bits (135), Expect(2) = 5e-12
Identities = 26/39 (66%), Positives = 32/39 (82%)
Frame = -2
Query: 471 KLWERAIEKMLRQKTDISNNQFYLMPGRSTMKAIFLLTK 355
KLWER IE LRQ+T +S+NQF MPGRSTM+AI+LL +
Sbjct: 648 KLWERVIEHRLRQETRVSDNQFGFMPGRSTMEAIYLLRR 686
Score = 39.7 bits (91), Expect(2) = 5e-12
Identities = 15/30 (50%), Positives = 25/30 (83%)
Frame = -1
Query: 322 VYIIFIDLEKAYRKVPKELNW*VLGKKGIL 233
++++FIDLEKAY +VP+++ W +L KKG +
Sbjct: 698 LHMVFIDLEKAYDRVPRDILWRILEKKGCM 727
>ref|XP_003590997.1| Myosin XI [Medicago truncatula] gi|355480045|gb|AES61248.1| Myosin
XI [Medicago truncatula]
Length = 1400
Score = 51.2 bits (121), Expect(2) = 1e-11
Identities = 22/39 (56%), Positives = 30/39 (76%)
Frame = -2
Query: 471 KLWERAIEKMLRQKTDISNNQFYLMPGRSTMKAIFLLTK 355
KLWER IE+ +R+ T ++ NQF MPGRSTM+ I+LL +
Sbjct: 514 KLWERVIERRVRKNTRVTYNQFRFMPGRSTMEVIYLLRR 552
Score = 43.9 bits (102), Expect(2) = 1e-11
Identities = 26/74 (35%), Positives = 37/74 (50%)
Frame = -1
Query: 322 VYIIFIDLEKAYRKVPKELNW*VLGKKGILNGYIDTIKGMYERVVNSVSENGEKKNMIPV 143
++++FIDLEKAY I+ Y+ IK M+E SVS + P+
Sbjct: 564 IHLVFIDLEKAYN---------------IMIAYVRAIKYMHEGTSTSVSTQDGVADDFPI 608
Query: 142 TIGLHLRATLSLYV 101
TIGLH + LS Y+
Sbjct: 609 TIGLHQGSNLSPYI 622
>gb|EMS61456.1| Protein HASTY 1 [Triticum urartu]
Length = 955
Score = 53.1 bits (126), Expect(2) = 1e-11
Identities = 24/37 (64%), Positives = 29/37 (78%)
Frame = -2
Query: 471 KLWERAIEKMLRQKTDISNNQFYLMPGRSTMKAIFLL 361
KLWER IE LR+ T ++ NQF MPGRSTM+AIFL+
Sbjct: 714 KLWERVIEHRLRRMTSVTKNQFGFMPGRSTMEAIFLV 750
Score = 41.6 bits (96), Expect(2) = 1e-11
Identities = 20/48 (41%), Positives = 29/48 (60%)
Frame = -1
Query: 337 EKGGSVYIIFIDLEKAYRKVPKELNW*VLGKKGILNGYIDTIKGMYER 194
E+ ++++FIDLEKAY K+P+ + W L K +L YI IK R
Sbjct: 759 EQKKDLHMLFIDLEKAYDKIPRNVMWWALEKHKVLAKYITLIKDTSSR 806
>emb|CDJ90320.1| RNA-directed DNA polymerase (reverse transcriptase) domain
containing protein [Haemonchus contortus]
Length = 1526
Score = 52.0 bits (123), Expect(2) = 5e-11
Identities = 25/81 (30%), Positives = 45/81 (55%)
Frame = -1
Query: 337 EKGGSVYIIFIDLEKAYRKVPKELNW*VLGKKGILNGYIDTIKGMYERVVNSVSENGEKK 158
EK YI F+DLEKA+ ++P+++ W L K+ + I +K MY+ ++ +
Sbjct: 664 EKRRPCYIAFLDLEKAFDRLPRQVLWRALRKRKVPEHLISLVKDMYDGSTTTIRTPHGQT 723
Query: 157 NMIPVTIGLHLRATLSLYVLI 95
I VT+G+H + LS ++ +
Sbjct: 724 GAIDVTVGVHQGSALSPFLFL 744
Score = 40.8 bits (94), Expect(2) = 5e-11
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = -2
Query: 471 KLWERAIEKMLRQKTDISNNQFYLMPGRSTMKAIFL 364
KL+ER ++ LR+ IS QF MPGRST AIF+
Sbjct: 619 KLYERLVDSRLRELVPISEKQFGFMPGRSTTDAIFI 654
>gb|EXC31207.1| DNA ligase 4 [Morus notabilis]
Length = 627
Score = 72.4 bits (176), Expect = 6e-11
Identities = 37/73 (50%), Positives = 48/73 (65%)
Frame = -1
Query: 322 VYIIFIDLEKAYRKVPKELNW*VLGKKGILNGYIDTIKGMYERVVNSVSENGEKKNMIPV 143
++I+FIDLEKAY +VP+E+ W VL K+G+ YI IK MY+ VV SV G P+
Sbjct: 544 LHIVFIDLEKAYDRVPREVLWWVLEKRGVRVRYIKVIKDMYDGVVTSVRTVGGYTTEFPI 603
Query: 142 TIGLHLRATLSLY 104
IGLH R+ LS Y
Sbjct: 604 RIGLHQRSALSPY 616
>emb|CBA11992.1| endonuclease-reverse transcriptase HmRTE-e01 [Heliconius melpomene]
Length = 990
Score = 55.8 bits (133), Expect(2) = 8e-11
Identities = 27/79 (34%), Positives = 45/79 (56%)
Frame = -1
Query: 337 EKGGSVYIIFIDLEKAYRKVPKELNW*VLGKKGILNGYIDTIKGMYERVVNSVSENGEKK 158
EK ++++ F+DL+KA+ VP++ W L KGI YI+ I+GMY + V
Sbjct: 636 EKRRALHVAFLDLQKAFDCVPRQCIWWALRSKGIPEAYIEIIRGMYHDSASMVRTAVGDT 695
Query: 157 NMIPVTIGLHLRATLSLYV 101
P+T+G+H + LS ++
Sbjct: 696 RPFPITVGVHQGSALSPFL 714
Score = 36.2 bits (82), Expect(2) = 8e-11
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = -2
Query: 471 KLWERAIEKMLRQKTDISNNQFYLMPGRSTMKAIFLL 361
KL+ER I+ LR++ +S +Q+ PG TM AIF L
Sbjct: 591 KLFERMIDLRLRRECTVSESQYGFQPGSGTMDAIFAL 627
>emb|CDJ80644.1| Endonuclease exonuclease phosphatase and RNA-directed DNA
polymerase (reverse transcriptase) domain containing
protein [Haemonchus contortus]
Length = 816
Score = 53.1 bits (126), Expect(2) = 2e-10
Identities = 25/81 (30%), Positives = 45/81 (55%)
Frame = -1
Query: 337 EKGGSVYIIFIDLEKAYRKVPKELNW*VLGKKGILNGYIDTIKGMYERVVNSVSENGEKK 158
EK Y+ F+DLEKA+ ++P+E+ W L K+ + I +K MY+ ++ +
Sbjct: 601 EKRRPCYLAFLDLEKAFDRLPREVLWSALRKRNVPEHLISLVKDMYDGSTTTIRTAHGQT 660
Query: 157 NMIPVTIGLHLRATLSLYVLI 95
I VT+G+H + LS ++ +
Sbjct: 661 GAIDVTVGVHQGSALSPFLFL 681
Score = 37.7 bits (86), Expect(2) = 2e-10
Identities = 18/36 (50%), Positives = 23/36 (63%)
Frame = -2
Query: 471 KLWERAIEKMLRQKTDISNNQFYLMPGRSTMKAIFL 364
KL+ER ++ LR+ IS QF MP RST AIF+
Sbjct: 556 KLYERLVDSRLRELVPISEGQFGFMPERSTTDAIFI 591
>emb|CDJ92648.1| RNA-directed DNA polymerase (reverse transcriptase) domain
containing protein [Haemonchus contortus]
Length = 479
Score = 52.0 bits (123), Expect(2) = 4e-10
Identities = 25/81 (30%), Positives = 45/81 (55%)
Frame = -1
Query: 337 EKGGSVYIIFIDLEKAYRKVPKELNW*VLGKKGILNGYIDTIKGMYERVVNSVSENGEKK 158
EK YI F+DLEKA+ ++P+++ W L K+ + I +K MY+ ++ +
Sbjct: 125 EKRRPCYIAFLDLEKAFDRLPRQVLWRALRKRKVPEHLISLVKDMYDGSTTTIRTPHGQT 184
Query: 157 NMIPVTIGLHLRATLSLYVLI 95
I VT+G+H + LS ++ +
Sbjct: 185 GAIDVTVGVHQGSALSPFLFL 205
Score = 37.7 bits (86), Expect(2) = 4e-10
Identities = 18/36 (50%), Positives = 23/36 (63%)
Frame = -2
Query: 471 KLWERAIEKMLRQKTDISNNQFYLMPGRSTMKAIFL 364
KL+ER ++ LR+ IS QF MP RST AIF+
Sbjct: 80 KLYERLVDSRLRELVPISQKQFGFMPERSTTDAIFI 115