BLASTX nr result
ID: Akebia26_contig00038056
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia26_contig00038056
(940 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI28010.3| unnamed protein product [Vitis vinifera] 438 e-120
ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polyme... 438 e-120
ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polyme... 412 e-113
ref|XP_006380470.1| hypothetical protein POPTR_0007s06560g [Popu... 406 e-111
ref|XP_006380469.1| hypothetical protein POPTR_0007s06560g [Popu... 406 e-111
ref|XP_006381765.1| hypothetical protein POPTR_0006s17780g [Popu... 402 e-109
ref|XP_002883963.1| RNA-dependent RNA polymerase family protein ... 383 e-104
ref|XP_006451272.1| hypothetical protein CICLE_v10007331mg [Citr... 381 e-103
ref|XP_006451271.1| hypothetical protein CICLE_v10007331mg [Citr... 381 e-103
ref|NP_179583.3| probable RNA-dependent RNA polymerase 5 [Arabid... 378 e-102
ref|XP_006853665.1| hypothetical protein AMTR_s00056p00110240 [A... 372 e-101
ref|XP_006408908.1| hypothetical protein EUTSA_v10001897mg [Eutr... 371 e-100
ref|NP_179581.2| probable RNA-dependent RNA polymerase 3 [Arabid... 369 1e-99
gb|AAC62125.1| hypothetical protein [Arabidopsis thaliana] 369 1e-99
ref|XP_006296898.1| hypothetical protein CARUB_v10012890mg [Caps... 366 8e-99
gb|EEE54052.1| hypothetical protein OsJ_00745 [Oryza sativa Japo... 366 8e-99
gb|EEC70113.1| hypothetical protein OsI_00772 [Oryza sativa Indi... 366 8e-99
sp|Q5QMN5.2|RDR3_ORYSJ RecName: Full=Probable RNA-dependent RNA ... 365 2e-98
ref|XP_006296906.1| hypothetical protein CARUB_v10012898mg [Caps... 363 7e-98
ref|XP_004288888.1| PREDICTED: probable RNA-dependent RNA polyme... 362 2e-97
>emb|CBI28010.3| unnamed protein product [Vitis vinifera]
Length = 929
Score = 438 bits (1126), Expect = e-120
Identities = 218/301 (72%), Positives = 252/301 (83%)
Frame = -3
Query: 905 PLLIQFRLFNNGRAVKGTFLVNKKLPPKTIQIRPSMIKVDTDPKHLDTQTANSLEIVSTS 726
PLLIQ RLFNNG AVKGT L+N+KLPP+TIQIRPSMIKV+TDPK DTQT NS+EI TS
Sbjct: 388 PLLIQCRLFNNGCAVKGTLLLNRKLPPRTIQIRPSMIKVETDPKLSDTQTVNSVEINGTS 447
Query: 725 NRPRKTSYLSRFLIAHLNYGGVPREYFMELLMNALEAAQSVHYNKSEALTVSLRYGEMDD 546
N+PR+ SYLS++LIA L+YGGVP EYFM LL +ALE A SV +K AL VSLR+GEMDD
Sbjct: 448 NQPRR-SYLSKYLIALLSYGGVPNEYFMNLLKDALEDAPSVQSSKRAALRVSLRFGEMDD 506
Query: 545 FLVPRMILCGIPLNEPYLQYRMSVLLKEERNGLKVGKLPVSECYYLMGTADPTGMLNSDQ 366
+V RMIL GIP++EP+L + +S ++ EER GL+VGKLPV++C+YLMGTADPTG L SD+
Sbjct: 507 SIVTRMILSGIPIDEPFLHHCLSFMVNEERKGLRVGKLPVNDCFYLMGTADPTGTLKSDE 566
Query: 365 VCIILDSGQISGKVLVYKHPGLHFGDIHVLTATYVKDLELIVGNAKYAIFFPTKGPRSLA 186
VCIILD GQ+ G+VLVYKHPGLHFGDIHVL ATYV+ LE VGNAKYAIFFP KGPRSLA
Sbjct: 567 VCIILDHGQVQGRVLVYKHPGLHFGDIHVLNATYVEALEEFVGNAKYAIFFPIKGPRSLA 626
Query: 185 DEMANSDFDGDMYWVSRNPQLLQYFQPSEPWKRPHSAKCVCHQKPTDFSTDELENVLFQQ 6
DEMANSDFDGDMYWVSRN QLLQYF+ SEPW R S + V ++PTDFS DELE+ LFQ
Sbjct: 627 DEMANSDFDGDMYWVSRNQQLLQYFRASEPWMRKRSTRHVPSKRPTDFSPDELEHELFQL 686
Query: 5 F 3
F
Sbjct: 687 F 687
>ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Vitis
vinifera]
Length = 943
Score = 438 bits (1126), Expect = e-120
Identities = 218/301 (72%), Positives = 252/301 (83%)
Frame = -3
Query: 905 PLLIQFRLFNNGRAVKGTFLVNKKLPPKTIQIRPSMIKVDTDPKHLDTQTANSLEIVSTS 726
PLLIQ RLFNNG AVKGT L+N+KLPP+TIQIRPSMIKV+TDPK DTQT NS+EI TS
Sbjct: 402 PLLIQCRLFNNGCAVKGTLLLNRKLPPRTIQIRPSMIKVETDPKLSDTQTVNSVEINGTS 461
Query: 725 NRPRKTSYLSRFLIAHLNYGGVPREYFMELLMNALEAAQSVHYNKSEALTVSLRYGEMDD 546
N+PR+ SYLS++LIA L+YGGVP EYFM LL +ALE A SV +K AL VSLR+GEMDD
Sbjct: 462 NQPRR-SYLSKYLIALLSYGGVPNEYFMNLLKDALEDAPSVQSSKRAALRVSLRFGEMDD 520
Query: 545 FLVPRMILCGIPLNEPYLQYRMSVLLKEERNGLKVGKLPVSECYYLMGTADPTGMLNSDQ 366
+V RMIL GIP++EP+L + +S ++ EER GL+VGKLPV++C+YLMGTADPTG L SD+
Sbjct: 521 SIVTRMILSGIPIDEPFLHHCLSFMVNEERKGLRVGKLPVNDCFYLMGTADPTGTLKSDE 580
Query: 365 VCIILDSGQISGKVLVYKHPGLHFGDIHVLTATYVKDLELIVGNAKYAIFFPTKGPRSLA 186
VCIILD GQ+ G+VLVYKHPGLHFGDIHVL ATYV+ LE VGNAKYAIFFP KGPRSLA
Sbjct: 581 VCIILDHGQVQGRVLVYKHPGLHFGDIHVLNATYVEALEEFVGNAKYAIFFPIKGPRSLA 640
Query: 185 DEMANSDFDGDMYWVSRNPQLLQYFQPSEPWKRPHSAKCVCHQKPTDFSTDELENVLFQQ 6
DEMANSDFDGDMYWVSRN QLLQYF+ SEPW R S + V ++PTDFS DELE+ LFQ
Sbjct: 641 DEMANSDFDGDMYWVSRNQQLLQYFRASEPWMRKRSTRHVPSKRPTDFSPDELEHELFQL 700
Query: 5 F 3
F
Sbjct: 701 F 701
>ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Cucumis
sativus]
Length = 1056
Score = 412 bits (1060), Expect = e-113
Identities = 209/312 (66%), Positives = 249/312 (79%)
Frame = -3
Query: 938 LTKSTSHIREPPLLIQFRLFNNGRAVKGTFLVNKKLPPKTIQIRPSMIKVDTDPKHLDTQ 759
LT +REPPLLIQFRLF NG AVKGTFL+NK+LPP+TIQIR SMIKV+ DP + +
Sbjct: 505 LTLPGLELREPPLLIQFRLFYNGLAVKGTFLLNKQLPPRTIQIRDSMIKVEIDPDLENFE 564
Query: 758 TANSLEIVSTSNRPRKTSYLSRFLIAHLNYGGVPREYFMELLMNALEAAQSVHYNKSEAL 579
T NSLE+V TSN P++T +LSR LIA LNYGGVPREYFM +L++AL+ Q V +K AL
Sbjct: 565 TENSLELVGTSNPPKRT-FLSRNLIALLNYGGVPREYFMNILVDALKDVQGVFSSKRAAL 623
Query: 578 TVSLRYGEMDDFLVPRMILCGIPLNEPYLQYRMSVLLKEERNGLKVGKLPVSECYYLMGT 399
VS+ GEMDDFLV RMIL GIPL+E YLQYR+SVLLKEE+ LK G+L V ECYYLMGT
Sbjct: 624 RVSINNGEMDDFLVARMILAGIPLDESYLQYRLSVLLKEEKKSLKSGRLHVPECYYLMGT 683
Query: 398 ADPTGMLNSDQVCIILDSGQISGKVLVYKHPGLHFGDIHVLTATYVKDLELIVGNAKYAI 219
DPT L S +VC+IL +GQI+GKVLVY++PGLHFGDIHVLTA YV+ L +VGNAKYAI
Sbjct: 684 VDPTFTLESGEVCVILYNGQINGKVLVYRNPGLHFGDIHVLTAKYVEKLVPVVGNAKYAI 743
Query: 218 FFPTKGPRSLADEMANSDFDGDMYWVSRNPQLLQYFQPSEPWKRPHSAKCVCHQKPTDFS 39
FF +KGPRS+ADE+A DFDGDMYWVSRN QLL+YF+P EPW+ S + V ++KP +FS
Sbjct: 744 FFSSKGPRSVADEIAGGDFDGDMYWVSRNSQLLEYFRPCEPWRPSPSTEVVTNKKPKEFS 803
Query: 38 TDELENVLFQQF 3
DELEN LF+ F
Sbjct: 804 ADELENELFKLF 815
>ref|XP_006380470.1| hypothetical protein POPTR_0007s06560g [Populus trichocarpa]
gi|550334280|gb|ERP58267.1| hypothetical protein
POPTR_0007s06560g [Populus trichocarpa]
Length = 877
Score = 406 bits (1043), Expect = e-111
Identities = 203/303 (66%), Positives = 247/303 (81%)
Frame = -3
Query: 911 EPPLLIQFRLFNNGRAVKGTFLVNKKLPPKTIQIRPSMIKVDTDPKHLDTQTANSLEIVS 732
+PPLLIQFRLFNNGRAVKGTFLVNKKL +T+ IRPSMIKV+TDPK T + NSLEIV
Sbjct: 333 DPPLLIQFRLFNNGRAVKGTFLVNKKLTHQTLHIRPSMIKVETDPKLSSTFSKNSLEIVG 392
Query: 731 TSNRPRKTSYLSRFLIAHLNYGGVPREYFMELLMNALEAAQSVHYNKSEALTVSLRYGEM 552
TS+RP+KT +LS+ LIA L+YGGVP E+FM ++ NALE A + NK+ AL V+L YG+M
Sbjct: 393 TSSRPKKT-FLSKNLIALLSYGGVPEEFFMGIVNNALEDAHGILSNKNAALRVALNYGDM 451
Query: 551 DDFLVPRMILCGIPLNEPYLQYRMSVLLKEERNGLKVGKLPVSECYYLMGTADPTGMLNS 372
DD +V MI CGIPL EPYLQ R+S+L+KEE+ LK GK+PV E YYLMGTADPTG+L S
Sbjct: 452 DDNIVATMIGCGIPLEEPYLQCRLSILMKEEKKSLKGGKIPVPESYYLMGTADPTGLLES 511
Query: 371 DQVCIILDSGQISGKVLVYKHPGLHFGDIHVLTATYVKDLELIVGNAKYAIFFPTKGPRS 192
D+VCIILD GQISG+VL+Y++PGLHFGDIH+L ATYV++LE VGNAKYAIFFP KGPRS
Sbjct: 512 DEVCIILDCGQISGEVLIYRNPGLHFGDIHILKATYVRELEDFVGNAKYAIFFPCKGPRS 571
Query: 191 LADEMANSDFDGDMYWVSRNPQLLQYFQPSEPWKRPHSAKCVCHQKPTDFSTDELENVLF 12
LADEM+ DFDGDM++VSRNPQLL+ F+ +EPW S V ++KP++FS +ELE LF
Sbjct: 572 LADEMSGGDFDGDMFFVSRNPQLLETFKQTEPWTPSTSTPNVPNRKPSEFSDEELEVELF 631
Query: 11 QQF 3
+ F
Sbjct: 632 KLF 634
>ref|XP_006380469.1| hypothetical protein POPTR_0007s06560g [Populus trichocarpa]
gi|550334279|gb|ERP58266.1| hypothetical protein
POPTR_0007s06560g [Populus trichocarpa]
Length = 899
Score = 406 bits (1043), Expect = e-111
Identities = 203/303 (66%), Positives = 247/303 (81%)
Frame = -3
Query: 911 EPPLLIQFRLFNNGRAVKGTFLVNKKLPPKTIQIRPSMIKVDTDPKHLDTQTANSLEIVS 732
+PPLLIQFRLFNNGRAVKGTFLVNKKL +T+ IRPSMIKV+TDPK T + NSLEIV
Sbjct: 355 DPPLLIQFRLFNNGRAVKGTFLVNKKLTHQTLHIRPSMIKVETDPKLSSTFSKNSLEIVG 414
Query: 731 TSNRPRKTSYLSRFLIAHLNYGGVPREYFMELLMNALEAAQSVHYNKSEALTVSLRYGEM 552
TS+RP+KT +LS+ LIA L+YGGVP E+FM ++ NALE A + NK+ AL V+L YG+M
Sbjct: 415 TSSRPKKT-FLSKNLIALLSYGGVPEEFFMGIVNNALEDAHGILSNKNAALRVALNYGDM 473
Query: 551 DDFLVPRMILCGIPLNEPYLQYRMSVLLKEERNGLKVGKLPVSECYYLMGTADPTGMLNS 372
DD +V MI CGIPL EPYLQ R+S+L+KEE+ LK GK+PV E YYLMGTADPTG+L S
Sbjct: 474 DDNIVATMIGCGIPLEEPYLQCRLSILMKEEKKSLKGGKIPVPESYYLMGTADPTGLLES 533
Query: 371 DQVCIILDSGQISGKVLVYKHPGLHFGDIHVLTATYVKDLELIVGNAKYAIFFPTKGPRS 192
D+VCIILD GQISG+VL+Y++PGLHFGDIH+L ATYV++LE VGNAKYAIFFP KGPRS
Sbjct: 534 DEVCIILDCGQISGEVLIYRNPGLHFGDIHILKATYVRELEDFVGNAKYAIFFPCKGPRS 593
Query: 191 LADEMANSDFDGDMYWVSRNPQLLQYFQPSEPWKRPHSAKCVCHQKPTDFSTDELENVLF 12
LADEM+ DFDGDM++VSRNPQLL+ F+ +EPW S V ++KP++FS +ELE LF
Sbjct: 594 LADEMSGGDFDGDMFFVSRNPQLLETFKQTEPWTPSTSTPNVPNRKPSEFSDEELEVELF 653
Query: 11 QQF 3
+ F
Sbjct: 654 KLF 656
>ref|XP_006381765.1| hypothetical protein POPTR_0006s17780g [Populus trichocarpa]
gi|550336519|gb|ERP59562.1| hypothetical protein
POPTR_0006s17780g [Populus trichocarpa]
Length = 866
Score = 402 bits (1032), Expect = e-109
Identities = 201/303 (66%), Positives = 245/303 (80%)
Frame = -3
Query: 911 EPPLLIQFRLFNNGRAVKGTFLVNKKLPPKTIQIRPSMIKVDTDPKHLDTQTANSLEIVS 732
+PPLLIQFRLFNNGRAVKGTFLVNKKL +T+ +RPSMIKV+TDPK +T + NSLEIV
Sbjct: 333 DPPLLIQFRLFNNGRAVKGTFLVNKKLNHRTLHVRPSMIKVETDPKLSNTFSKNSLEIVG 392
Query: 731 TSNRPRKTSYLSRFLIAHLNYGGVPREYFMELLMNALEAAQSVHYNKSEALTVSLRYGEM 552
TS RP+KT +LS+ LIA L+YGGVP E+FM +L NALE A + NK AL V+L YG+M
Sbjct: 393 TSCRPKKT-FLSKNLIALLSYGGVPEEFFMGILNNALEDAHGILSNKKAALRVALNYGDM 451
Query: 551 DDFLVPRMILCGIPLNEPYLQYRMSVLLKEERNGLKVGKLPVSECYYLMGTADPTGMLNS 372
DD +V MI CGIPL EPYLQ+ +S+L KEE+ LK GK+PV E YYLMGTADPTG+L S
Sbjct: 452 DDNIVATMIGCGIPLEEPYLQHHLSILKKEEKKSLKGGKIPVPESYYLMGTADPTGLLES 511
Query: 371 DQVCIILDSGQISGKVLVYKHPGLHFGDIHVLTATYVKDLELIVGNAKYAIFFPTKGPRS 192
D+VCIILD GQ+SG+VLVY++PGLHFGDIH+L ATYV++LE VGNAKYAIFFP KGPRS
Sbjct: 512 DEVCIILDCGQVSGEVLVYRNPGLHFGDIHILKATYVRELEDFVGNAKYAIFFPCKGPRS 571
Query: 191 LADEMANSDFDGDMYWVSRNPQLLQYFQPSEPWKRPHSAKCVCHQKPTDFSTDELENVLF 12
LADEM+ DFDGDM++VSRNP+LL+ F+ +EPW S V ++KP++FS +ELE LF
Sbjct: 572 LADEMSGGDFDGDMFFVSRNPRLLENFKQTEPWTPSTSTPNVPNRKPSEFSDEELEVELF 631
Query: 11 QQF 3
+ F
Sbjct: 632 KLF 634
>ref|XP_002883963.1| RNA-dependent RNA polymerase family protein [Arabidopsis lyrata
subsp. lyrata] gi|297329803|gb|EFH60222.1| RNA-dependent
RNA polymerase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 981
Score = 383 bits (983), Expect = e-104
Identities = 185/305 (60%), Positives = 241/305 (79%), Gaps = 1/305 (0%)
Frame = -3
Query: 914 REPPLLIQFRLFNNGRAVKGTFLVNKKLPPKTIQIRPSMIKVDTDPKHLDTQTANSLEIV 735
++PPLLIQFR+F +G AVKGTFL+NKKL P+T+Q+RPSMIKV DP + T N+LE+V
Sbjct: 438 QDPPLLIQFRMFYDGYAVKGTFLLNKKLCPRTVQVRPSMIKVSKDPSLSNFSTFNALEVV 497
Query: 734 STSNRPRKTSYLSRFLIAHLNYGGVPREYFMELLMNALEAAQSVHYNKSEALTVSLRYGE 555
+TSN PR+T LS+ L+A L+YGG+P E+F+++L+N LE ++S+ YNK AL V+L YGE
Sbjct: 498 TTSNPPRRTK-LSKNLVALLSYGGIPNEFFLDILLNTLEESKSIFYNKHAALNVALNYGE 556
Query: 554 MDDFLVPRMILCGIPLNEPYLQYRMSVLLKEERNGLKVGKLPVSECYYLMGTADPTGMLN 375
MDD +MIL GIPL+EP+L+ +S+LLK E+N LK G+LPV+E YYLMGT DPTG L
Sbjct: 557 MDDQNAAQMILVGIPLDEPHLKNHLSILLKTEKNDLKAGRLPVTESYYLMGTVDPTGELK 616
Query: 374 SDQVCIILDSGQISGKVLVYKHPGLHFGDIHVLTATYVKDLELIVGNAKYAIFFPTKGPR 195
D+VC+IL+SGQISG+VLVY++PGLHFGDIH+L ATYVK LE VGN+KYA+FFP KGPR
Sbjct: 617 EDEVCVILESGQISGEVLVYRNPGLHFGDIHILKATYVKALEEYVGNSKYAVFFPQKGPR 676
Query: 194 SLADEMANSDFDGDMYWVSRNPQLLQYFQPSEPW-KRPHSAKCVCHQKPTDFSTDELENV 18
SL DE+A DFDGDMY++SRNP+LL++F+PSEPW +K + P+ S +ELE
Sbjct: 677 SLGDEIAGGDFDGDMYFISRNPELLEHFKPSEPWVSLTPPSKSNSGRAPSQLSPEELEEE 736
Query: 17 LFQQF 3
LF+ F
Sbjct: 737 LFEMF 741
>ref|XP_006451272.1| hypothetical protein CICLE_v10007331mg [Citrus clementina]
gi|568843311|ref|XP_006475557.1| PREDICTED: probable
RNA-dependent RNA polymerase 3-like isoform X2 [Citrus
sinensis] gi|557554498|gb|ESR64512.1| hypothetical
protein CICLE_v10007331mg [Citrus clementina]
Length = 1013
Score = 381 bits (978), Expect = e-103
Identities = 199/314 (63%), Positives = 242/314 (77%), Gaps = 2/314 (0%)
Frame = -3
Query: 938 LTKSTSHIREPPLLIQFRLFNNGRAVKGTFLVNKKLPPKTIQIRPSMIKVDTDPKHLDTQ 759
+ ++ SH EPPLL+Q RLF NG AVKGT L+NKKLPP+TIQIRPSMIKV D D Q
Sbjct: 458 VARTESHYGEPPLLMQVRLFYNGTAVKGTLLLNKKLPPQTIQIRPSMIKVKADRDLSDGQ 517
Query: 758 TANSLEIVSTSNRPRKTSYLSRFLIAHLNYGGVPREYFMELLMNALEAAQSVHYNKSEAL 579
T NSLE+V TSN+PRKT YLSR LIA L+YGGVP +F+++L NAL+ A+ V NK AL
Sbjct: 518 TFNSLEVVKTSNQPRKT-YLSRNLIALLSYGGVPEIFFLDILRNALDDARGVFSNKRNAL 576
Query: 578 TVSLRYGEMD-DFLVPRMILCGIPLNEPYLQYRMSVLLKEERNGLKVGKLPVSECYYLMG 402
VS YG MD DF RMIL GI L+EPYLQ+R+S+L+KEE+ L+ GKLPV+E YYLMG
Sbjct: 577 KVSFNYGGMDYDFTSARMILSGISLDEPYLQHRLSILMKEEKKSLQAGKLPVTESYYLMG 636
Query: 401 TADPTGMLNSDQVCIILDSGQISG-KVLVYKHPGLHFGDIHVLTATYVKDLELIVGNAKY 225
T DPTG+L S++VCIIL GQ+S KVLVY++PGLHFGDIHVL ATYVK+LE VG +KY
Sbjct: 637 TVDPTGILKSNEVCIILKDGQVSWEKVLVYRNPGLHFGDIHVLKATYVKELEDFVGTSKY 696
Query: 224 AIFFPTKGPRSLADEMANSDFDGDMYWVSRNPQLLQYFQPSEPWKRPHSAKCVCHQKPTD 45
AIFFP GPRSLADE+A DFDGDMY+VSRNP+LL++F+ SE W S +++P D
Sbjct: 697 AIFFPCNGPRSLADEIAGGDFDGDMYFVSRNPELLKHFKESERWMST-SKNLSANKRPID 755
Query: 44 FSTDELENVLFQQF 3
FS +ELE+ LF+ F
Sbjct: 756 FSLEELESELFKLF 769
>ref|XP_006451271.1| hypothetical protein CICLE_v10007331mg [Citrus clementina]
gi|568843309|ref|XP_006475556.1| PREDICTED: probable
RNA-dependent RNA polymerase 3-like isoform X1 [Citrus
sinensis] gi|557554497|gb|ESR64511.1| hypothetical
protein CICLE_v10007331mg [Citrus clementina]
Length = 1015
Score = 381 bits (978), Expect = e-103
Identities = 199/314 (63%), Positives = 242/314 (77%), Gaps = 2/314 (0%)
Frame = -3
Query: 938 LTKSTSHIREPPLLIQFRLFNNGRAVKGTFLVNKKLPPKTIQIRPSMIKVDTDPKHLDTQ 759
+ ++ SH EPPLL+Q RLF NG AVKGT L+NKKLPP+TIQIRPSMIKV D D Q
Sbjct: 460 VARTESHYGEPPLLMQVRLFYNGTAVKGTLLLNKKLPPQTIQIRPSMIKVKADRDLSDGQ 519
Query: 758 TANSLEIVSTSNRPRKTSYLSRFLIAHLNYGGVPREYFMELLMNALEAAQSVHYNKSEAL 579
T NSLE+V TSN+PRKT YLSR LIA L+YGGVP +F+++L NAL+ A+ V NK AL
Sbjct: 520 TFNSLEVVKTSNQPRKT-YLSRNLIALLSYGGVPEIFFLDILRNALDDARGVFSNKRNAL 578
Query: 578 TVSLRYGEMD-DFLVPRMILCGIPLNEPYLQYRMSVLLKEERNGLKVGKLPVSECYYLMG 402
VS YG MD DF RMIL GI L+EPYLQ+R+S+L+KEE+ L+ GKLPV+E YYLMG
Sbjct: 579 KVSFNYGGMDYDFTSARMILSGISLDEPYLQHRLSILMKEEKKSLQAGKLPVTESYYLMG 638
Query: 401 TADPTGMLNSDQVCIILDSGQISG-KVLVYKHPGLHFGDIHVLTATYVKDLELIVGNAKY 225
T DPTG+L S++VCIIL GQ+S KVLVY++PGLHFGDIHVL ATYVK+LE VG +KY
Sbjct: 639 TVDPTGILKSNEVCIILKDGQVSWEKVLVYRNPGLHFGDIHVLKATYVKELEDFVGTSKY 698
Query: 224 AIFFPTKGPRSLADEMANSDFDGDMYWVSRNPQLLQYFQPSEPWKRPHSAKCVCHQKPTD 45
AIFFP GPRSLADE+A DFDGDMY+VSRNP+LL++F+ SE W S +++P D
Sbjct: 699 AIFFPCNGPRSLADEIAGGDFDGDMYFVSRNPELLKHFKESERWMST-SKNLSANKRPID 757
Query: 44 FSTDELENVLFQQF 3
FS +ELE+ LF+ F
Sbjct: 758 FSLEELESELFKLF 771
>ref|NP_179583.3| probable RNA-dependent RNA polymerase 5 [Arabidopsis thaliana]
gi|322967572|sp|O82188.2|RDR5_ARATH RecName:
Full=Probable RNA-dependent RNA polymerase 5;
Short=AtRDRP5; AltName: Full=RNA-directed RNA polymerase
5 gi|330251850|gb|AEC06944.1| probable RNA-dependent RNA
polymerase 5 [Arabidopsis thaliana]
Length = 977
Score = 378 bits (970), Expect = e-102
Identities = 183/305 (60%), Positives = 239/305 (78%), Gaps = 1/305 (0%)
Frame = -3
Query: 914 REPPLLIQFRLFNNGRAVKGTFLVNKKLPPKTIQIRPSMIKVDTDPKHLDTQTANSLEIV 735
++PPLLIQFR+F +G AVKGTFL+NKKL P+T+Q+RPSMIKV DP + T N+LE+V
Sbjct: 434 QDPPLLIQFRMFYDGYAVKGTFLLNKKLCPRTVQVRPSMIKVSKDPSLSNFSTFNALEVV 493
Query: 734 STSNRPRKTSYLSRFLIAHLNYGGVPREYFMELLMNALEAAQSVHYNKSEALTVSLRYGE 555
+TSN P++T LS+ L+A L+YGG+P E+F+++L+N LE ++S+ YNK AL +L YGE
Sbjct: 494 TTSNPPKRTK-LSKNLVALLSYGGIPNEFFLDILLNTLEESKSIFYNKRAALNAALNYGE 552
Query: 554 MDDFLVPRMILCGIPLNEPYLQYRMSVLLKEERNGLKVGKLPVSECYYLMGTADPTGMLN 375
MDD +MIL GIPL+EP+L+ +S+LLK E+N LK GKLPV+E YYLMGT DPTG L
Sbjct: 553 MDDQNAAQMILVGIPLDEPHLKNYLSILLKTEKNDLKAGKLPVTESYYLMGTVDPTGALK 612
Query: 374 SDQVCIILDSGQISGKVLVYKHPGLHFGDIHVLTATYVKDLELIVGNAKYAIFFPTKGPR 195
D+VC+IL+SGQISG+VLVY++PGLHFGDIH+L ATYVK LE VGN+K+A+FFP KGPR
Sbjct: 613 EDEVCVILESGQISGEVLVYRNPGLHFGDIHILKATYVKALEEYVGNSKFAVFFPQKGPR 672
Query: 194 SLADEMANSDFDGDMYWVSRNPQLLQYFQPSEPW-KRPHSAKCVCHQKPTDFSTDELENV 18
SL DE+A DFDGDMY++SRNP+LL+ F+PSEPW +K + P+ S +ELE
Sbjct: 673 SLGDEIAGGDFDGDMYFISRNPELLENFKPSEPWVSLTPPSKSNSGRAPSQLSPEELEEE 732
Query: 17 LFQQF 3
LF+ F
Sbjct: 733 LFEMF 737
>ref|XP_006853665.1| hypothetical protein AMTR_s00056p00110240 [Amborella trichopoda]
gi|548857326|gb|ERN15132.1| hypothetical protein
AMTR_s00056p00110240 [Amborella trichopoda]
Length = 988
Score = 372 bits (956), Expect = e-101
Identities = 187/301 (62%), Positives = 229/301 (76%), Gaps = 1/301 (0%)
Frame = -3
Query: 902 LLIQFRLFNNGRAVKGTFLVNKKLPPKTIQIRPSMIKVDTDPKHLDTQTANSLEIVSTSN 723
LLIQFRLF +G AVKGT LVNK LPP TIQ+RPSM+KV+ D + NS E+V TSN
Sbjct: 450 LLIQFRLFYDGCAVKGTVLVNKLLPPNTIQVRPSMVKVERDTDFSRLPSFNSFEMVGTSN 509
Query: 722 RPRKTSYLSRFLIAHLNYGGVPREYFMELLMNALEAAQSVHYNKSEALTVSLRYGEM-DD 546
RPR + LSR+LI L++GGVP+ FM L+ AL+ Q+V Y+K ALT +++Y E+ D+
Sbjct: 510 RPRGAA-LSRYLITLLSHGGVPKSCFMFLIQAALDDVQNVRYSKKLALTAAVKYQEISDN 568
Query: 545 FLVPRMILCGIPLNEPYLQYRMSVLLKEERNGLKVGKLPVSECYYLMGTADPTGMLNSDQ 366
LV RMI CG+PL EPYLQ+R+S+L+KEER GLK GK+ + YYLMGTADPTG L ++
Sbjct: 569 LLVARMIFCGLPLEEPYLQHRLSILMKEERKGLKEGKVLLPNSYYLMGTADPTGKLKGNE 628
Query: 365 VCIILDSGQISGKVLVYKHPGLHFGDIHVLTATYVKDLELIVGNAKYAIFFPTKGPRSLA 186
VCIILD GQISGKVLVY+HPGLHFGDIHV TATY++DL IVGNAK+AIFF T+GPRS A
Sbjct: 629 VCIILDHGQISGKVLVYRHPGLHFGDIHVFTATYIEDLVEIVGNAKFAIFFSTQGPRSAA 688
Query: 185 DEMANSDFDGDMYWVSRNPQLLQYFQPSEPWKRPHSAKCVCHQKPTDFSTDELENVLFQQ 6
DE+AN DFDGDMYW+S NP+LL YF+ PW+R S K +KP ++S DELE LF
Sbjct: 689 DEIANGDFDGDMYWISTNPELLHYFKAGPPWERSSSEKPPPQRKPIEYSPDELETELFDL 748
Query: 5 F 3
F
Sbjct: 749 F 749
>ref|XP_006408908.1| hypothetical protein EUTSA_v10001897mg [Eutrema salsugineum]
gi|557110064|gb|ESQ50361.1| hypothetical protein
EUTSA_v10001897mg [Eutrema salsugineum]
Length = 988
Score = 371 bits (953), Expect = e-100
Identities = 183/305 (60%), Positives = 235/305 (77%), Gaps = 1/305 (0%)
Frame = -3
Query: 914 REPPLLIQFRLFNNGRAVKGTFLVNKKLPPKTIQIRPSMIKVDTDPKHLDTQTANSLEIV 735
++PPLLIQFR+F +G AVKGTFL+NKKLP +T+Q+RPSMIKV D + T NSLE+V
Sbjct: 446 QDPPLLIQFRMFYDGNAVKGTFLLNKKLPDRTVQVRPSMIKVSKDRALSNFSTFNSLEVV 505
Query: 734 STSNRPRKTSYLSRFLIAHLNYGGVPREYFMELLMNALEAAQSVHYNKSEALTVSLRYGE 555
+TSN P++T LSR L+A L+YGGVP E+F++LL+N +E +++ NK AL +L +G+
Sbjct: 506 TTSNPPKRTK-LSRNLVALLSYGGVPNEFFLDLLLNTMEETKTIFNNKRAALKAALNHGD 564
Query: 554 MDDFLVPRMILCGIPLNEPYLQYRMSVLLKEERNGLKVGKLPVSECYYLMGTADPTGMLN 375
MDD +MIL GIPL+EP+L+ R+S+L E+N LK G+LPV+E YYLMGT DPTG L
Sbjct: 565 MDDQNAAQMILVGIPLDEPHLKDRLSILSNIEKNDLKAGRLPVTESYYLMGTVDPTGELK 624
Query: 374 SDQVCIILDSGQISGKVLVYKHPGLHFGDIHVLTATYVKDLELIVGNAKYAIFFPTKGPR 195
D+VC+IL+SGQISG VLVY++PG+HFGDIHVL ATYVK LE VGN+KYA+FFP KGPR
Sbjct: 625 EDEVCVILESGQISGDVLVYRNPGVHFGDIHVLKATYVKALEEYVGNSKYAVFFPQKGPR 684
Query: 194 SLADEMANSDFDGDMYWVSRNPQLLQYFQPSEPW-KRPHSAKCVCHQKPTDFSTDELENV 18
SL DE+A DFDGDMY++SRNP+LL+ F+PSEPW +K +KP DFS +ELE
Sbjct: 685 SLGDEIAGGDFDGDMYFISRNPELLEQFKPSEPWVSLSPPSKSNSTRKPIDFSPEELEEE 744
Query: 17 LFQQF 3
LF F
Sbjct: 745 LFDMF 749
>ref|NP_179581.2| probable RNA-dependent RNA polymerase 3 [Arabidopsis thaliana]
gi|322967566|sp|O82190.2|RDR3_ARATH RecName:
Full=Probable RNA-dependent RNA polymerase 3;
Short=AtRDRP3; AltName: Full=RNA-directed RNA polymerase
3 gi|330251848|gb|AEC06942.1| probable RNA-dependent RNA
polymerase 3 [Arabidopsis thaliana]
Length = 992
Score = 369 bits (946), Expect = 1e-99
Identities = 182/305 (59%), Positives = 231/305 (75%), Gaps = 1/305 (0%)
Frame = -3
Query: 914 REPPLLIQFRLFNNGRAVKGTFLVNKKLPPKTIQIRPSMIKVDTDPKHLDTQTANSLEIV 735
+EPPLLIQFR+F NG AVKGTFL NKKLPP+T+Q+RPSMIKV D + T NSLE+V
Sbjct: 447 QEPPLLIQFRIFYNGYAVKGTFLTNKKLPPRTVQVRPSMIKVYEDRTLSNLSTFNSLEVV 506
Query: 734 STSNRPRKTSYLSRFLIAHLNYGGVPREYFMELLMNALEAAQSVHYNKSEALTVSLRYGE 555
+TSN PRK LSR L+A L+YGGVP ++F+ +L N LE ++++ Y++ A ++ YG
Sbjct: 507 TTSNPPRKAR-LSRNLVALLSYGGVPNDFFLNILRNTLEESKTIFYSERAAFKAAINYG- 564
Query: 554 MDDFLVPRMILCGIPLNEPYLQYRMSVLLKEERNGLKVGKLPVSECYYLMGTADPTGMLN 375
DD MIL GIPL+EPYL+ R+S LLK ERN LK G+ P+ E YY+MGT DPTG L
Sbjct: 565 -DDQYTADMILVGIPLDEPYLKDRLSYLLKTERNALKAGRFPIDESYYIMGTVDPTGELK 623
Query: 374 SDQVCIILDSGQISGKVLVYKHPGLHFGDIHVLTATYVKDLELIVGNAKYAIFFPTKGPR 195
+++C+IL SGQISG VLVY++PGLHFGDIHVL ATYVK LE VGNAK+A+FFP KGPR
Sbjct: 624 ENEICVILHSGQISGDVLVYRNPGLHFGDIHVLKATYVKALEDYVGNAKFAVFFPQKGPR 683
Query: 194 SLADEMANSDFDGDMYWVSRNPQLLQYFQPSEPW-KRPHSAKCVCHQKPTDFSTDELENV 18
SL DE+A DFDGDMY++SRNP+LL++F+PSEPW +K C +KP++ S +ELE
Sbjct: 684 SLGDEIAGGDFDGDMYFISRNPKLLEHFKPSEPWVSSSKPSKIYCGRKPSELSEEELEEE 743
Query: 17 LFQQF 3
LF+ F
Sbjct: 744 LFKMF 748
>gb|AAC62125.1| hypothetical protein [Arabidopsis thaliana]
Length = 966
Score = 369 bits (946), Expect = 1e-99
Identities = 182/305 (59%), Positives = 231/305 (75%), Gaps = 1/305 (0%)
Frame = -3
Query: 914 REPPLLIQFRLFNNGRAVKGTFLVNKKLPPKTIQIRPSMIKVDTDPKHLDTQTANSLEIV 735
+EPPLLIQFR+F NG AVKGTFL NKKLPP+T+Q+RPSMIKV D + T NSLE+V
Sbjct: 421 QEPPLLIQFRIFYNGYAVKGTFLTNKKLPPRTVQVRPSMIKVYEDRTLSNLSTFNSLEVV 480
Query: 734 STSNRPRKTSYLSRFLIAHLNYGGVPREYFMELLMNALEAAQSVHYNKSEALTVSLRYGE 555
+TSN PRK LSR L+A L+YGGVP ++F+ +L N LE ++++ Y++ A ++ YG
Sbjct: 481 TTSNPPRKAR-LSRNLVALLSYGGVPNDFFLNILRNTLEESKTIFYSERAAFKAAINYG- 538
Query: 554 MDDFLVPRMILCGIPLNEPYLQYRMSVLLKEERNGLKVGKLPVSECYYLMGTADPTGMLN 375
DD MIL GIPL+EPYL+ R+S LLK ERN LK G+ P+ E YY+MGT DPTG L
Sbjct: 539 -DDQYTADMILVGIPLDEPYLKDRLSYLLKTERNALKAGRFPIDESYYIMGTVDPTGELK 597
Query: 374 SDQVCIILDSGQISGKVLVYKHPGLHFGDIHVLTATYVKDLELIVGNAKYAIFFPTKGPR 195
+++C+IL SGQISG VLVY++PGLHFGDIHVL ATYVK LE VGNAK+A+FFP KGPR
Sbjct: 598 ENEICVILHSGQISGDVLVYRNPGLHFGDIHVLKATYVKALEDYVGNAKFAVFFPQKGPR 657
Query: 194 SLADEMANSDFDGDMYWVSRNPQLLQYFQPSEPW-KRPHSAKCVCHQKPTDFSTDELENV 18
SL DE+A DFDGDMY++SRNP+LL++F+PSEPW +K C +KP++ S +ELE
Sbjct: 658 SLGDEIAGGDFDGDMYFISRNPKLLEHFKPSEPWVSSSKPSKIYCGRKPSELSEEELEEE 717
Query: 17 LFQQF 3
LF+ F
Sbjct: 718 LFKMF 722
>ref|XP_006296898.1| hypothetical protein CARUB_v10012890mg [Capsella rubella]
gi|482565607|gb|EOA29796.1| hypothetical protein
CARUB_v10012890mg [Capsella rubella]
Length = 998
Score = 366 bits (939), Expect = 8e-99
Identities = 180/304 (59%), Positives = 233/304 (76%), Gaps = 1/304 (0%)
Frame = -3
Query: 911 EPPLLIQFRLFNNGRAVKGTFLVNKKLPPKTIQIRPSMIKVDTDPKHLDTQTANSLEIVS 732
+PPLLIQFR+F G AVKGTFL NKKLPP+T+Q+RPSMIKV D L+ T NSLE+V+
Sbjct: 452 DPPLLIQFRMFYKGYAVKGTFLSNKKLPPQTVQVRPSMIKVYEDQALLNFSTFNSLEVVN 511
Query: 731 TSNRPRKTSYLSRFLIAHLNYGGVPREYFMELLMNALEAAQSVHYNKSEALTVSLRYGEM 552
TSN P+ T LSR LIA L+YGGVP ++F+ +L LE ++++ Y++ A+ ++ YG+M
Sbjct: 512 TSNPPKMTR-LSRNLIALLSYGGVPNDFFLNILRKTLEESKTIFYSERAAIKAAINYGDM 570
Query: 551 DDFLVPRMILCGIPLNEPYLQYRMSVLLKEERNGLKVGKLPVSECYYLMGTADPTGMLNS 372
DD MIL IPL+EP+L+ R+S+LLK E+N LK G+LP+ E YYLMGT DPTG L
Sbjct: 571 DDQNTAEMILVDIPLDEPHLKDRLSILLKTEKNALKEGRLPIGESYYLMGTVDPTGELKE 630
Query: 371 DQVCIILDSGQISGKVLVYKHPGLHFGDIHVLTATYVKDLELIVGNAKYAIFFPTKGPRS 192
++VC+IL++GQISG VLVY++PGLHFGDIHVL ATYVK LE VGN+KYA+FFP KGPRS
Sbjct: 631 NEVCVILETGQISGNVLVYRNPGLHFGDIHVLKATYVKALEDYVGNSKYAVFFPQKGPRS 690
Query: 191 LADEMANSDFDGDMYWVSRNPQLLQYFQPSEPW-KRPHSAKCVCHQKPTDFSTDELENVL 15
L DE+A DFDGDMY++SRNPQLL++F+PSEPW +K +KP++ S +ELE L
Sbjct: 691 LGDEIAGGDFDGDMYFISRNPQLLEHFKPSEPWVSSSKPSKVYSGRKPSELSHEELEEEL 750
Query: 14 FQQF 3
F+ F
Sbjct: 751 FKLF 754
>gb|EEE54052.1| hypothetical protein OsJ_00745 [Oryza sativa Japonica Group]
Length = 1243
Score = 366 bits (939), Expect = 8e-99
Identities = 187/334 (55%), Positives = 236/334 (70%), Gaps = 22/334 (6%)
Frame = -3
Query: 938 LTKSTSHIREPPLLIQFRLFNNGRAVKGTFLVNKKLPPKTIQIRPSMIKVDTDP------ 777
L + S E PLL+QFRLF NG AVKGT LV+++LPP TI IRPSM+K++T P
Sbjct: 660 LKRHRSLTAEHPLLMQFRLFYNGSAVKGTVLVDRRLPPATILIRPSMVKIETHPELSGVR 719
Query: 776 --------------KHLD-TQTANSLEIVSTSNRPRKTSYLSRFLIAHLNYGGVPREYFM 642
K L Q+ NS EIVSTSNRPR+T SRFLI L YGGVP EYF+
Sbjct: 720 SVNSSEIVSARNAKKSLSGVQSVNSFEIVSTSNRPRRT-LTSRFLITLLCYGGVPEEYFL 778
Query: 641 ELLMNALEAAQSVHYNKSEALTVSLRYGEMDDFLVPRMILCGIPLNEPYLQYRMSVLLKE 462
ELL +A+E A++ Y+ +AL ++ Y +M+D + RMIL GIPL E YLQ+R+ + ++
Sbjct: 779 ELLQSAIEGAENACYDYEDALRIAFSYADMEDSMSARMILSGIPLEESYLQHRLDFMAQQ 838
Query: 461 ERNGLKVGKLPVSECYYLMGTADPTGMLNSDQVCIILDSGQISGKVLVYKHPGLHFGDIH 282
ER G+K GK+P+ ECYYLM T DPTG L ++VC+IL++GQ SG VLVYKHPGLHFGDIH
Sbjct: 839 ERKGIKQGKIPIDECYYLMDTTDPTGTLRPNEVCVILENGQFSGDVLVYKHPGLHFGDIH 898
Query: 281 VLTATYVKDLEL-IVGNAKYAIFFPTKGPRSLADEMANSDFDGDMYWVSRNPQLLQYFQP 105
VL ATY++DLE VG AKYAI FP GPRSLADEMANSDFDGD+YWVS+NP+LL++F+P
Sbjct: 899 VLKATYIRDLEKEYVGYAKYAILFPISGPRSLADEMANSDFDGDIYWVSKNPKLLEHFKP 958
Query: 104 SEPWKRPHSAKCVCHQKPTDFSTDELENVLFQQF 3
SEPW + K +KP D + +LE +LF +F
Sbjct: 959 SEPWVQAIKPKKTKQKKPQDCNESKLERLLFHEF 992
>gb|EEC70113.1| hypothetical protein OsI_00772 [Oryza sativa Indica Group]
Length = 1155
Score = 366 bits (939), Expect = 8e-99
Identities = 187/334 (55%), Positives = 236/334 (70%), Gaps = 22/334 (6%)
Frame = -3
Query: 938 LTKSTSHIREPPLLIQFRLFNNGRAVKGTFLVNKKLPPKTIQIRPSMIKVDTDP------ 777
L + S E PLL+QFRLF NG AVKGT LV+++LPP TI IRPSM+K++T P
Sbjct: 599 LKRHRSLTAEHPLLMQFRLFYNGSAVKGTVLVDRRLPPATILIRPSMVKIETHPELSGVR 658
Query: 776 --------------KHLD-TQTANSLEIVSTSNRPRKTSYLSRFLIAHLNYGGVPREYFM 642
K L Q+ NS EIVSTSNRPR+T SRFLI L YGGVP EYF+
Sbjct: 659 SVNSSEIVSARNAKKSLSGVQSVNSFEIVSTSNRPRRT-LTSRFLITLLCYGGVPEEYFL 717
Query: 641 ELLMNALEAAQSVHYNKSEALTVSLRYGEMDDFLVPRMILCGIPLNEPYLQYRMSVLLKE 462
ELL +A+E A++ Y+ +AL ++ Y +M+D + RMIL GIPL E YLQ+R+ + ++
Sbjct: 718 ELLQSAIEGAENACYDYEDALRIAFSYADMEDSMSARMILSGIPLEESYLQHRLDFMAQQ 777
Query: 461 ERNGLKVGKLPVSECYYLMGTADPTGMLNSDQVCIILDSGQISGKVLVYKHPGLHFGDIH 282
ER G+K GK+P+ ECYYLM T DPTG L ++VC+IL++GQ SG VLVYKHPGLHFGDIH
Sbjct: 778 ERKGIKQGKIPIDECYYLMDTTDPTGTLRPNEVCVILENGQFSGDVLVYKHPGLHFGDIH 837
Query: 281 VLTATYVKDLEL-IVGNAKYAIFFPTKGPRSLADEMANSDFDGDMYWVSRNPQLLQYFQP 105
VL ATY++DLE VG AKYAI FP GPRSLADEMANSDFDGD+YWVS+NP+LL++F+P
Sbjct: 838 VLKATYIRDLEKEYVGYAKYAILFPISGPRSLADEMANSDFDGDIYWVSKNPKLLEHFKP 897
Query: 104 SEPWKRPHSAKCVCHQKPTDFSTDELENVLFQQF 3
SEPW + K +KP D + +LE +LF +F
Sbjct: 898 SEPWVQAIKPKKTKQKKPQDCNESKLERLLFHEF 931
>sp|Q5QMN5.2|RDR3_ORYSJ RecName: Full=Probable RNA-dependent RNA polymerase 3; Short=OsRDR3
Length = 1153
Score = 365 bits (936), Expect = 2e-98
Identities = 184/327 (56%), Positives = 234/327 (71%), Gaps = 22/327 (6%)
Frame = -3
Query: 917 IREPPLLIQFRLFNNGRAVKGTFLVNKKLPPKTIQIRPSMIKVDTDP------------- 777
++ PLL+QFRLF NG AVKGT LV+++LPP TI IRPSM+K++T P
Sbjct: 586 LKPQPLLMQFRLFYNGSAVKGTVLVDRRLPPATILIRPSMVKIETHPELSGVRSVNSSEI 645
Query: 776 -------KHLD-TQTANSLEIVSTSNRPRKTSYLSRFLIAHLNYGGVPREYFMELLMNAL 621
K L Q+ NS EIVSTSNRPR+T SRFLI L YGGVP EYF+ELL +A+
Sbjct: 646 VSARNAKKSLSGVQSVNSFEIVSTSNRPRRT-LTSRFLITLLCYGGVPEEYFLELLQSAI 704
Query: 620 EAAQSVHYNKSEALTVSLRYGEMDDFLVPRMILCGIPLNEPYLQYRMSVLLKEERNGLKV 441
E A++ Y+ +AL ++ Y +M+D + RMIL GIPL E YLQ+R+ + ++ER G+K
Sbjct: 705 EGAENACYDYEDALRIAFSYADMEDSMSARMILSGIPLEESYLQHRLDFMAQQERKGIKQ 764
Query: 440 GKLPVSECYYLMGTADPTGMLNSDQVCIILDSGQISGKVLVYKHPGLHFGDIHVLTATYV 261
GK+P+ ECYYLM T DPTG L ++VC+IL++GQ SG VLVYKHPGLHFGDIHVL ATY+
Sbjct: 765 GKIPIDECYYLMDTTDPTGTLRPNEVCVILENGQFSGDVLVYKHPGLHFGDIHVLKATYI 824
Query: 260 KDLEL-IVGNAKYAIFFPTKGPRSLADEMANSDFDGDMYWVSRNPQLLQYFQPSEPWKRP 84
+DLE VG AKYAI FP GPRSLADEMANSDFDGD+YWVS+NP+LL++F+PSEPW +
Sbjct: 825 RDLEKEYVGYAKYAILFPISGPRSLADEMANSDFDGDIYWVSKNPKLLEHFKPSEPWVQA 884
Query: 83 HSAKCVCHQKPTDFSTDELENVLFQQF 3
K +KP D + +LE +LF +F
Sbjct: 885 IKPKKTKQKKPQDCNESKLERLLFHEF 911
>ref|XP_006296906.1| hypothetical protein CARUB_v10012898mg [Capsella rubella]
gi|482565615|gb|EOA29804.1| hypothetical protein
CARUB_v10012898mg [Capsella rubella]
Length = 982
Score = 363 bits (931), Expect = 7e-98
Identities = 180/305 (59%), Positives = 235/305 (77%), Gaps = 1/305 (0%)
Frame = -3
Query: 914 REPPLLIQFRLFNNGRAVKGTFLVNKKLPPKTIQIRPSMIKVDTDPKHLDTQTANSLEIV 735
+EPPLLIQFR+F NG A+KGTFL+NKK+P +T+Q+RPSMIKV D + T N+LE+V
Sbjct: 442 QEPPLLIQFRMFYNGYAIKGTFLLNKKIPSRTVQVRPSMIKVLPDSLP-NISTFNTLEVV 500
Query: 734 STSNRPRKTSYLSRFLIAHLNYGGVPREYFMELLMNALEAAQSVHYNKSEALTVSLRYGE 555
+TS P++T LSR L+A L+YGG+P E+F+++L N LE ++++ YNK AL +L YGE
Sbjct: 501 NTSFPPKRTK-LSRNLVALLSYGGIPDEFFLDILHNTLEESKAIFYNKRAALNAALSYGE 559
Query: 554 MDDFLVPRMILCGIPLNEPYLQYRMSVLLKEERNGLKVGKLPVSECYYLMGTADPTGMLN 375
MDD +MIL GIPL+EP+L+ +S LK E+N LK G+LPV+E YYLMGT DPTG L
Sbjct: 560 MDDQNAAQMILAGIPLDEPHLKTCLSSFLKREKNDLKAGRLPVTESYYLMGTVDPTGELK 619
Query: 374 SDQVCIILDSGQISGKVLVYKHPGLHFGDIHVLTATYVKDLELIVGNAKYAIFFPTKGPR 195
D+VC+IL+SGQISG+VLVY++PGLHFGDIHVL ATYVK LE VGN+K+A+FFP KGPR
Sbjct: 620 EDEVCVILESGQISGEVLVYRNPGLHFGDIHVLKATYVKALEEYVGNSKFAVFFPQKGPR 679
Query: 194 SLADEMANSDFDGDMYWVSRNPQLLQYFQPSEPW-KRPHSAKCVCHQKPTDFSTDELENV 18
SL DE+A DFDGD+Y++SRNP+LL++F+PSEPW +K + P FS +ELE
Sbjct: 680 SLGDEIAGGDFDGDIYFISRNPELLEHFKPSEPWVSLTPPSKSNSARGPCQFSPEELEEE 739
Query: 17 LFQQF 3
LF+ F
Sbjct: 740 LFEMF 744
>ref|XP_004288888.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Fragaria
vesca subsp. vesca]
Length = 1068
Score = 362 bits (928), Expect = 2e-97
Identities = 186/314 (59%), Positives = 234/314 (74%), Gaps = 2/314 (0%)
Frame = -3
Query: 938 LTKSTSHIREPPLLIQFRLFNNGRAVKGTFLVNKKLPPKTIQIRPSMIKVDTDPKHLDTQ 759
+TKS +E PLLIQ RLF+ G A KGTF VNK LPPKT+QIRPSMIKV+ DPK DT
Sbjct: 506 MTKSDFRTQEAPLLIQCRLFHEGTAAKGTFTVNKLLPPKTLQIRPSMIKVEKDPKFSDTN 565
Query: 758 TANSLEIVSTSNRPRKTSYLSRFLIAHLNYGGVPREYFMELLMNALEAAQSVHYNKSEAL 579
T NSLEIV TS P K +YLSR +IA L YGGVP++ FM++L NA+E A V AL
Sbjct: 566 TINSLEIVCTSAPPMK-AYLSRTIIALLVYGGVPKDLFMKILENAVEDAHHVISKTRAAL 624
Query: 578 TVSLRYGEMDDFLVPRMILCGIPLNEPYLQYRMSVLLK-EERNGLKVGKLPVSECYYLMG 402
V+ +YG +DDFLV MI GIP+ E YLQYR+S LL+ +E GL+ G+LP+ + + LMG
Sbjct: 625 KVAEKYGGIDDFLVETMIRLGIPIEESYLQYRLSCLLRLQEGTGLRKGRLPIPDTFMLMG 684
Query: 401 TADPTGMLNSDQVCIILDSGQISGKVLVYKHPGLHFGDIHVLTATYVKDLELIVGNAKYA 222
TADPTG L D+VC+IL GQ+SG VLVY+HPG HFGDI VL ATYVK+LE +VG+A+YA
Sbjct: 685 TADPTGTLERDEVCVILKDGQLSGTVLVYRHPGQHFGDIKVLKATYVKELESVVGDARYA 744
Query: 221 IFFPTKGPRSLADEMANSDFDGDMYWVSRNPQLLQYFQPSEPWKRPHSA-KCVCHQKPTD 45
IFF KGPR++ADE+A DFDGD+YWVSRNPQLL++++PSEPW A + V ++PT+
Sbjct: 745 IFFSCKGPRNVADEIAGGDFDGDLYWVSRNPQLLKWYKPSEPWNEGEVATQKVDSKRPTE 804
Query: 44 FSTDELENVLFQQF 3
S +EL+ +F+ F
Sbjct: 805 LSDEELQAEMFRLF 818