BLASTX nr result

ID: Akebia26_contig00035424 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia26_contig00035424
         (282 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006428285.1| hypothetical protein CICLE_v10013389mg, part...    69   7e-10
gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 proteas...    57   3e-06
gb|AAF70842.1|AC003113_9 F24O1.21 [Arabidopsis thaliana]               55   4e-06

>ref|XP_006428285.1| hypothetical protein CICLE_v10013389mg, partial [Citrus clementina]
           gi|557530342|gb|ESR41525.1| hypothetical protein
           CICLE_v10013389mg, partial [Citrus clementina]
          Length = 127

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 32/57 (56%), Positives = 44/57 (77%)
 Frame = +2

Query: 95  SKKNSATMAIEIPSKYPYPSTLNVGNFVTIKLTHSNFLLWKTQILGLIESQDMMGFI 265
           S K ++T++      +PYPSTLN+ NFV++KLT +N++LWKTQI GLIESQDM  F+
Sbjct: 5   SSKTTSTVS------FPYPSTLNISNFVSLKLTQNNYMLWKTQISGLIESQDMGEFV 55


>gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 protease homolog from
           Arabidopsis thaliana BAC gb|AF080119 and is a member of
           the reverse transcriptase family PF|00078 [Arabidopsis
           thaliana]
          Length = 1415

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 23/46 (50%), Positives = 35/46 (76%)
 Frame = +2

Query: 134 SKYPYPSTLNVGNFVTIKLTHSNFLLWKTQILGLIESQDMMGFIDG 271
           + YP+P  ++V + VT+KLT SN+LLWKTQ   L+ SQ ++GF++G
Sbjct: 3   TSYPFPDNVHVTSSVTLKLTDSNYLLWKTQFESLLSSQKLIGFVNG 48


>gb|AAF70842.1|AC003113_9 F24O1.21 [Arabidopsis thaliana]
          Length = 361

 Score = 55.1 bits (131), Expect(2) = 4e-06
 Identities = 22/44 (50%), Positives = 33/44 (75%)
 Frame = +2

Query: 140 YPYPSTLNVGNFVTIKLTHSNFLLWKTQILGLIESQDMMGFIDG 271
           YP+P  ++V + VT+KL  SN+LLWKTQ   L+ SQ ++GF++G
Sbjct: 70  YPFPDNVHVSSSVTLKLNDSNYLLWKTQFESLLSSQKLIGFVNG 113



 Score = 21.2 bits (43), Expect(2) = 4e-06
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +3

Query: 69  KVKTVS*IHQKKILQQWPLKSLQSILIHQH 158
           K KTV+   +K I  +   K LQS+ +H +
Sbjct: 30  KQKTVTNTEKKTITLENKFKPLQSLPLHYY 59


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