BLASTX nr result

ID: Akebia26_contig00034436 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia26_contig00034436
         (364 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37206.3| unnamed protein product [Vitis vinifera]               62   1e-07
ref|XP_002269187.1| PREDICTED: pentatricopeptide repeat-containi...    62   1e-07

>emb|CBI37206.3| unnamed protein product [Vitis vinifera]
          Length = 664

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 41/106 (38%), Positives = 57/106 (53%), Gaps = 1/106 (0%)
 Frame = -3

Query: 317 MPSCRVQNLYFILPSTFKQLY-RYLHIKRSKPQFPLAAVHHLKSNAHDSEXXXXXXXXXX 141
           MP+   +   F L S    LY R  H+ R KPQ PL+  H+ K    DS+          
Sbjct: 1   MPAFNFRAFIFSLSSN---LYCRRFHVHRFKPQIPLSGTHYSKLRFDDSQILECLSQQRL 57

Query: 140 XXXQARDLLDKMPQRANDGSCVVLWTSILSKYARDGHIEESRALFD 3
               AR +LD+MP R      VV WTS+LSK++++G I+E+RALF+
Sbjct: 58  RE--ARHMLDEMPNRGVLDR-VVCWTSLLSKFSKNGFIDEARALFE 100


>ref|XP_002269187.1| PREDICTED: pentatricopeptide repeat-containing protein At1g32415,
           mitochondrial-like [Vitis vinifera]
          Length = 743

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 41/106 (38%), Positives = 57/106 (53%), Gaps = 1/106 (0%)
 Frame = -3

Query: 317 MPSCRVQNLYFILPSTFKQLY-RYLHIKRSKPQFPLAAVHHLKSNAHDSEXXXXXXXXXX 141
           MP+   +   F L S    LY R  H+ R KPQ PL+  H+ K    DS+          
Sbjct: 1   MPAFNFRAFIFSLSSN---LYCRRFHVHRFKPQIPLSGTHYSKLRFDDSQILECLSQQRL 57

Query: 140 XXXQARDLLDKMPQRANDGSCVVLWTSILSKYARDGHIEESRALFD 3
               AR +LD+MP R      VV WTS+LSK++++G I+E+RALF+
Sbjct: 58  RE--ARHMLDEMPNRGVLDR-VVCWTSLLSKFSKNGFIDEARALFE 100


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