BLASTX nr result
ID: Akebia26_contig00034276
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia26_contig00034276
(424 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAP43919.1| integrase [Gossypium hirsutum] 205 2e-57
emb|CAN78587.1| hypothetical protein VITISV_043910 [Vitis vinifera] 198 8e-56
ref|XP_006596896.1| PREDICTED: uncharacterized protein LOC102664... 196 2e-55
gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana] 193 8e-55
ref|XP_006575965.1| PREDICTED: uncharacterized protein LOC102669... 190 5e-54
emb|CAN74973.1| hypothetical protein VITISV_001042 [Vitis vinifera] 191 9e-54
gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum ... 188 2e-53
emb|CAN81775.1| hypothetical protein VITISV_020071 [Vitis vinifera] 190 3e-53
gb|AAD17351.1| contains similarity to retrovirus-related polypro... 188 3e-53
emb|CAN81776.1| hypothetical protein VITISV_020072 [Vitis vinifera] 190 3e-53
gb|AAP43914.1| integrase [Gossypium raimondii] 187 3e-53
gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum ... 187 4e-53
gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japoni... 188 1e-52
gb|ABF97027.1| retrotransposon protein, putative, Ty3-gypsy subc... 188 1e-52
gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group] 187 3e-52
ref|NP_001063540.1| Os09g0491900 [Oryza sativa Japonica Group] g... 187 3e-52
gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group] gi|... 187 3e-52
gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sa... 186 5e-52
gb|AAQ56407.1| putative gag-pol polyprotein [Oryza sativa Japoni... 186 5e-52
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja... 184 1e-51
>gb|AAP43919.1| integrase [Gossypium hirsutum]
Length = 334
Score = 205 bits (521), Expect(2) = 2e-57
Identities = 87/116 (75%), Positives = 106/116 (91%)
Frame = +2
Query: 8 HMKRDGGLMGHFGVAKTLAILQEHFYWPHMKRDVERICGRCVTCRQAKSRVPPHGLYTPL 187
H GGLMGHFGVAKTL ILQEHF+WPHMK+DVE++C +C+TC+QAKS+V HGLYTPL
Sbjct: 168 HEAHSGGLMGHFGVAKTLDILQEHFHWPHMKKDVEKVCSKCITCKQAKSKVMLHGLYTPL 227
Query: 188 PIPSTPWIDISMDFMLGLPRSKRGRDSVFVVVDRFSKMAHFIPCHNMNDASHVADL 355
PIP++PW+D+SMDF+LGLPR+K+GRDS+FVVVDRFSKM+HFIPCH +DA+HVADL
Sbjct: 228 PIPTSPWVDLSMDFILGLPRTKKGRDSIFVVVDRFSKMSHFIPCHKTDDATHVADL 283
Score = 43.5 bits (101), Expect(2) = 2e-57
Identities = 18/24 (75%), Positives = 22/24 (91%)
Frame = +1
Query: 352 FVREIVRLHGMPRTIVSDRDAKFL 423
F +E+VRLHG+P+TIVSDRD KFL
Sbjct: 284 FFKEVVRLHGIPKTIVSDRDVKFL 307
>emb|CAN78587.1| hypothetical protein VITISV_043910 [Vitis vinifera]
Length = 565
Score = 198 bits (504), Expect(2) = 8e-56
Identities = 92/113 (81%), Positives = 98/113 (86%)
Frame = +2
Query: 26 GLMGHFGVAKTLAILQEHFYWPHMKRDVERICGRCVTCRQAKSRVPPHGLYTPLPIPSTP 205
GLMG FGV+KTLAILQEHFYW HMKRDVERICGRCVTCRQAKSRV PHGLY PL IPS P
Sbjct: 409 GLMGDFGVSKTLAILQEHFYWSHMKRDVERICGRCVTCRQAKSRVQPHGLYXPLXIPSEP 468
Query: 206 WIDISMDFMLGLPRSKRGRDSVFVVVDRFSKMAHFIPCHNMNDASHVADLLGR 364
WIDIS+DF+LGLPRSK GRDS+FVVVDRFS M HFIPCH ++ SHV DL R
Sbjct: 469 WIDISIDFVLGLPRSKCGRDSIFVVVDRFSMMTHFIPCHKXDNVSHVVDLFFR 521
Score = 44.7 bits (104), Expect(2) = 8e-56
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = +1
Query: 352 FVREIVRLHGMPRTIVSDRDAKFL 423
F REI+RLHGMPRTIVS+RDAK L
Sbjct: 519 FFREIIRLHGMPRTIVSNRDAKLL 542
>ref|XP_006596896.1| PREDICTED: uncharacterized protein LOC102664455 [Glycine max]
Length = 1176
Score = 196 bits (497), Expect(2) = 2e-55
Identities = 84/112 (75%), Positives = 98/112 (87%)
Frame = +2
Query: 20 DGGLMGHFGVAKTLAILQEHFYWPHMKRDVERICGRCVTCRQAKSRVPPHGLYTPLPIPS 199
+GGLMGHFGV KTL ILQEHF+WPHM+RDV + CG C+ C+QAKS+V PHGLYTPLP+P
Sbjct: 799 EGGLMGHFGVQKTLEILQEHFFWPHMRRDVHKFCGHCIVCKQAKSKVKPHGLYTPLPVPE 858
Query: 200 TPWIDISMDFMLGLPRSKRGRDSVFVVVDRFSKMAHFIPCHNMNDASHVADL 355
PW DISMDF+LGLP++K G+DSVFVVVDRFSKMAHFIPC ++DA HVADL
Sbjct: 859 YPWTDISMDFVLGLPKTKNGKDSVFVVVDRFSKMAHFIPCKKVDDACHVADL 910
Score = 45.8 bits (107), Expect(2) = 2e-55
Identities = 21/30 (70%), Positives = 24/30 (80%)
Frame = +1
Query: 334 CFTCC*FVREIVRLHGMPRTIVSDRDAKFL 423
C F +EIVRLHG+PR+IVSDRDAKFL
Sbjct: 905 CHVADLFFKEIVRLHGLPRSIVSDRDAKFL 934
>gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]
Length = 1887
Score = 193 bits (491), Expect(2) = 8e-55
Identities = 83/114 (72%), Positives = 101/114 (88%)
Frame = +2
Query: 23 GGLMGHFGVAKTLAILQEHFYWPHMKRDVERICGRCVTCRQAKSRVPPHGLYTPLPIPST 202
GGLMGHFGV+KT+ ++Q+HF+WPHMKRDVERIC RC TC+QAK++ PHGLYTPLPIPS
Sbjct: 1394 GGLMGHFGVSKTIKVMQDHFHWPHMKRDVERICERCPTCKQAKAKSQPHGLYTPLPIPSH 1453
Query: 203 PWIDISMDFMLGLPRSKRGRDSVFVVVDRFSKMAHFIPCHNMNDASHVADLLGR 364
PW DISMDF++GLPR++ G+DS+FVVVDRFSKMAHFIPCH +DA H+A+L R
Sbjct: 1454 PWNDISMDFVVGLPRTRTGKDSIFVVVDRFSKMAHFIPCHKTDDAIHIANLFFR 1507
Score = 46.2 bits (108), Expect(2) = 8e-55
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = +1
Query: 352 FVREIVRLHGMPRTIVSDRDAKFL 423
F RE+VRLHGMP+TIVSDRD KFL
Sbjct: 1505 FFREVVRLHGMPKTIVSDRDTKFL 1528
>ref|XP_006575965.1| PREDICTED: uncharacterized protein LOC102669237, partial [Glycine
max]
Length = 1520
Score = 190 bits (483), Expect(2) = 5e-54
Identities = 83/112 (74%), Positives = 98/112 (87%)
Frame = +2
Query: 20 DGGLMGHFGVAKTLAILQEHFYWPHMKRDVERICGRCVTCRQAKSRVPPHGLYTPLPIPS 199
+GGLMGHFG+ KTL +L+E FYWPHMK+DV + C RCV C QAKSRV PHGLY PLPIPS
Sbjct: 1249 EGGLMGHFGIDKTLVLLKEKFYWPHMKKDVHKHCTRCVACLQAKSRVMPHGLYIPLPIPS 1308
Query: 200 TPWIDISMDFMLGLPRSKRGRDSVFVVVDRFSKMAHFIPCHNMNDASHVADL 355
TPW+DISMDF+LGLPR++RG DS+FVVVDRFSKMAHFIPCH ++DA H++ L
Sbjct: 1309 TPWVDISMDFVLGLPRTQRGVDSIFVVVDRFSKMAHFIPCHKVDDAFHISKL 1360
Score = 46.6 bits (109), Expect(2) = 5e-54
Identities = 20/24 (83%), Positives = 23/24 (95%)
Frame = +1
Query: 352 FVREIVRLHGMPRTIVSDRDAKFL 423
F +E+VRLHG+PRTIVSDRDAKFL
Sbjct: 1361 FFKEVVRLHGLPRTIVSDRDAKFL 1384
>emb|CAN74973.1| hypothetical protein VITISV_001042 [Vitis vinifera]
Length = 1281
Score = 191 bits (486), Expect(2) = 9e-54
Identities = 84/114 (73%), Positives = 98/114 (85%)
Frame = +2
Query: 23 GGLMGHFGVAKTLAILQEHFYWPHMKRDVERICGRCVTCRQAKSRVPPHGLYTPLPIPST 202
GGLMGHFGV KTL +L EHF+WP MK DVER C RC+TCRQAKSRV PHGLYTPLP+PS
Sbjct: 909 GGLMGHFGVRKTLDVLHEHFFWPKMKCDVERACARCITCRQAKSRVLPHGLYTPLPVPSA 968
Query: 203 PWIDISMDFMLGLPRSKRGRDSVFVVVDRFSKMAHFIPCHNMNDASHVADLLGR 364
PW+DISMDF+LGLPRS+ GR S+FVVVDRFSKM +FI CH ++DA+H+A+L R
Sbjct: 969 PWVDISMDFVLGLPRSRNGRXSIFVVVDRFSKMTYFISCHKIDDATHIANLFFR 1022
Score = 44.7 bits (104), Expect(2) = 9e-54
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = +1
Query: 352 FVREIVRLHGMPRTIVSDRDAKFL 423
F REIVRLHG+PR+IVSDRD KFL
Sbjct: 1020 FFREIVRLHGVPRSIVSDRDVKFL 1043
>gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum demissum]
Length = 1588
Score = 188 bits (477), Expect(2) = 2e-53
Identities = 83/111 (74%), Positives = 96/111 (86%)
Frame = +2
Query: 23 GGLMGHFGVAKTLAILQEHFYWPHMKRDVERICGRCVTCRQAKSRVPPHGLYTPLPIPST 202
GGLMGHFGV KTL IL EHFYWP M++DVE++C C+ C+QAKSR PHGLYTPLP+ ++
Sbjct: 1156 GGLMGHFGVPKTLEILSEHFYWPSMRKDVEKVCSYCLECKQAKSRTLPHGLYTPLPVSNS 1215
Query: 203 PWIDISMDFMLGLPRSKRGRDSVFVVVDRFSKMAHFIPCHNMNDASHVADL 355
PWIDISMDF+LGLPR+K G+DS+FVVVDRFSKMA FIPC NDASHVADL
Sbjct: 1216 PWIDISMDFILGLPRTKYGKDSIFVVVDRFSKMARFIPCKKTNDASHVADL 1266
Score = 47.0 bits (110), Expect(2) = 2e-53
Identities = 20/24 (83%), Positives = 24/24 (100%)
Frame = +1
Query: 352 FVREIVRLHGMPRTIVSDRDAKFL 423
FV+E+V+LHG+PRTIVSDRDAKFL
Sbjct: 1267 FVKEVVKLHGIPRTIVSDRDAKFL 1290
>emb|CAN81775.1| hypothetical protein VITISV_020071 [Vitis vinifera]
Length = 1159
Score = 190 bits (482), Expect(2) = 3e-53
Identities = 83/114 (72%), Positives = 98/114 (85%)
Frame = +2
Query: 23 GGLMGHFGVAKTLAILQEHFYWPHMKRDVERICGRCVTCRQAKSRVPPHGLYTPLPIPST 202
GGLMGHFGV KTL +L EHF+WP MKRDVER+C RC+T RQ KS+V PHGLYTPLP+PS
Sbjct: 868 GGLMGHFGVRKTLEVLHEHFFWPKMKRDVERVCVRCITYRQTKSKVLPHGLYTPLPVPSA 927
Query: 203 PWIDISMDFMLGLPRSKRGRDSVFVVVDRFSKMAHFIPCHNMNDASHVADLLGR 364
PW DISMDF+LGLPRS+ GR+S+FVVVDRFSKM HFI CH ++DA+H+A+L R
Sbjct: 928 PWFDISMDFVLGLPRSRNGRNSIFVVVDRFSKMRHFISCHKIDDATHIANLFFR 981
Score = 44.7 bits (104), Expect(2) = 3e-53
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = +1
Query: 352 FVREIVRLHGMPRTIVSDRDAKFL 423
F REIVRLHG+PR+IVSDRD KFL
Sbjct: 979 FFREIVRLHGVPRSIVSDRDVKFL 1002
>gb|AAD17351.1| contains similarity to retrovirus-related polyproteins and to CCHC
zinc finger protein (Pfam: PF00098, Score=16.3, E=0.051,
E= 1) [Arabidopsis thaliana] gi|7267432|emb|CAB77944.1|
putative polyprotein [Arabidopsis thaliana]
Length = 1138
Score = 188 bits (478), Expect(2) = 3e-53
Identities = 81/114 (71%), Positives = 99/114 (86%)
Frame = +2
Query: 23 GGLMGHFGVAKTLAILQEHFYWPHMKRDVERICGRCVTCRQAKSRVPPHGLYTPLPIPST 202
GGLMGHFGV+KTL ++Q+HF+WPHMKRDVER+C RC TC+QAK++ PHGL TPLPIP
Sbjct: 769 GGLMGHFGVSKTLKVMQDHFHWPHMKRDVERMCERCTTCKQAKAKSQPHGLCTPLPIPLH 828
Query: 203 PWIDISMDFMLGLPRSKRGRDSVFVVVDRFSKMAHFIPCHNMNDASHVADLLGR 364
PW DISMDF++GLPR++ G+DS+FVVVDRFSKMAHFIPCH +DA H+A+L R
Sbjct: 829 PWNDISMDFVVGLPRTRTGKDSIFVVVDRFSKMAHFIPCHKTDDAMHIANLFFR 882
Score = 46.2 bits (108), Expect(2) = 3e-53
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = +1
Query: 352 FVREIVRLHGMPRTIVSDRDAKFL 423
F RE+VRLHGMP+TIVSDRD KFL
Sbjct: 880 FFREVVRLHGMPKTIVSDRDTKFL 903
>emb|CAN81776.1| hypothetical protein VITISV_020072 [Vitis vinifera]
Length = 366
Score = 190 bits (482), Expect(2) = 3e-53
Identities = 83/114 (72%), Positives = 98/114 (85%)
Frame = +2
Query: 23 GGLMGHFGVAKTLAILQEHFYWPHMKRDVERICGRCVTCRQAKSRVPPHGLYTPLPIPST 202
GGLMGHFGV KTL +L EHF+WP MKRDVER+C RC+T RQ KS+V PHGLYTPLP+PS
Sbjct: 173 GGLMGHFGVRKTLEVLHEHFFWPKMKRDVERVCVRCITYRQTKSKVLPHGLYTPLPVPSA 232
Query: 203 PWIDISMDFMLGLPRSKRGRDSVFVVVDRFSKMAHFIPCHNMNDASHVADLLGR 364
PW DISMDF+LGLPRS+ GR+S+FVVVDRFSKM HFI CH ++DA+H+A+L R
Sbjct: 233 PWFDISMDFVLGLPRSRNGRNSIFVVVDRFSKMRHFISCHKIDDATHIANLFFR 286
Score = 44.7 bits (104), Expect(2) = 3e-53
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = +1
Query: 352 FVREIVRLHGMPRTIVSDRDAKFL 423
F REIVRLHG+PR+IVSDRD KFL
Sbjct: 284 FFREIVRLHGVPRSIVSDRDVKFL 307
>gb|AAP43914.1| integrase [Gossypium raimondii]
Length = 340
Score = 187 bits (474), Expect(2) = 3e-53
Identities = 81/114 (71%), Positives = 97/114 (85%)
Frame = +2
Query: 23 GGLMGHFGVAKTLAILQEHFYWPHMKRDVERICGRCVTCRQAKSRVPPHGLYTPLPIPST 202
GGLMGHFGV KT +L EHFYWP+M++ VE+IC C+TC+Q KS V PHGLYTPLP+PS+
Sbjct: 173 GGLMGHFGVTKTYDVLHEHFYWPNMRKLVEKICSTCITCKQDKSTVMPHGLYTPLPVPSS 232
Query: 203 PWIDISMDFMLGLPRSKRGRDSVFVVVDRFSKMAHFIPCHNMNDASHVADLLGR 364
PW DIS+DF++GLP +K GRDS+FVVVDRFSKMAHFIPCH +DA+HVADL R
Sbjct: 233 PWTDISIDFVIGLPITKHGRDSIFVVVDRFSKMAHFIPCHKTDDATHVADLFFR 286
Score = 47.4 bits (111), Expect(2) = 3e-53
Identities = 21/24 (87%), Positives = 23/24 (95%)
Frame = +1
Query: 352 FVREIVRLHGMPRTIVSDRDAKFL 423
F RE+VRLHG+PRTIVSDRDAKFL
Sbjct: 284 FFREVVRLHGIPRTIVSDRDAKFL 307
>gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum demissum]
Length = 1588
Score = 187 bits (474), Expect(2) = 4e-53
Identities = 83/111 (74%), Positives = 95/111 (85%)
Frame = +2
Query: 23 GGLMGHFGVAKTLAILQEHFYWPHMKRDVERICGRCVTCRQAKSRVPPHGLYTPLPIPST 202
GGLMGHFGV KTL IL EHFYWP M++DVE++C C+ C+QAKSR PHGLYTPLP+ +
Sbjct: 1156 GGLMGHFGVPKTLEILSEHFYWPSMRKDVEKVCSYCLECKQAKSRTLPHGLYTPLPVSNF 1215
Query: 203 PWIDISMDFMLGLPRSKRGRDSVFVVVDRFSKMAHFIPCHNMNDASHVADL 355
PWIDISMDF+LGLPR+K G+DS+FVVVDRFSKMA FIPC NDASHVADL
Sbjct: 1216 PWIDISMDFILGLPRTKYGKDSIFVVVDRFSKMARFIPCKKTNDASHVADL 1266
Score = 47.0 bits (110), Expect(2) = 4e-53
Identities = 20/24 (83%), Positives = 24/24 (100%)
Frame = +1
Query: 352 FVREIVRLHGMPRTIVSDRDAKFL 423
FV+E+V+LHG+PRTIVSDRDAKFL
Sbjct: 1267 FVKEVVKLHGIPRTIVSDRDAKFL 1290
>gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|91795218|gb|ABE60890.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1616
Score = 188 bits (478), Expect(2) = 1e-52
Identities = 84/114 (73%), Positives = 97/114 (85%)
Frame = +2
Query: 23 GGLMGHFGVAKTLAILQEHFYWPHMKRDVERICGRCVTCRQAKSRVPPHGLYTPLPIPST 202
GGLMGHFGV KT IL +HF+WP M+RDVER RC TC++AKSR+ PHGLY PLP+PS
Sbjct: 1231 GGLMGHFGVKKTEDILADHFFWPKMRRDVERFVARCTTCQKAKSRLNPHGLYMPLPVPSV 1290
Query: 203 PWIDISMDFMLGLPRSKRGRDSVFVVVDRFSKMAHFIPCHNMNDASHVADLLGR 364
PW DISMDF+LGLPR+K+GRDS+FVVVDRFSKMAHFIPCH +DA+HVADL R
Sbjct: 1291 PWEDISMDFVLGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKSDDATHVADLFFR 1344
Score = 44.3 bits (103), Expect(2) = 1e-52
Identities = 20/24 (83%), Positives = 21/24 (87%)
Frame = +1
Query: 352 FVREIVRLHGMPRTIVSDRDAKFL 423
F REIVRLHG+P TIVSDRD KFL
Sbjct: 1342 FFREIVRLHGVPNTIVSDRDTKFL 1365
>gb|ABF97027.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 889
Score = 188 bits (478), Expect(2) = 1e-52
Identities = 84/114 (73%), Positives = 97/114 (85%)
Frame = +2
Query: 23 GGLMGHFGVAKTLAILQEHFYWPHMKRDVERICGRCVTCRQAKSRVPPHGLYTPLPIPST 202
GGLMGHFGV KT IL +HF+WP M+RDVER RC TC++AKSR+ PHGLY PLP+PS
Sbjct: 544 GGLMGHFGVKKTEDILADHFFWPKMRRDVERFVARCTTCQKAKSRLNPHGLYMPLPVPSV 603
Query: 203 PWIDISMDFMLGLPRSKRGRDSVFVVVDRFSKMAHFIPCHNMNDASHVADLLGR 364
PW DISMDF+LGLPR+K+GRDS+FVVVDRFSKMAHFIPCH +DA+HVADL R
Sbjct: 604 PWEDISMDFVLGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKSDDATHVADLFFR 657
Score = 44.3 bits (103), Expect(2) = 1e-52
Identities = 20/24 (83%), Positives = 21/24 (87%)
Frame = +1
Query: 352 FVREIVRLHGMPRTIVSDRDAKFL 423
F REIVRLHG+P TIVSDRD KFL
Sbjct: 655 FFREIVRLHGVPNTIVSDRDTKFL 678
>gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1713
Score = 187 bits (474), Expect(2) = 3e-52
Identities = 82/111 (73%), Positives = 96/111 (86%)
Frame = +2
Query: 23 GGLMGHFGVAKTLAILQEHFYWPHMKRDVERICGRCVTCRQAKSRVPPHGLYTPLPIPST 202
GGLMGHFG KT +L +HFYWP M+RDV+R+ RCVTC +AKS++ PHGLYTPLP+PS
Sbjct: 1206 GGLMGHFGWRKTYDMLADHFYWPKMRRDVQRLVQRCVTCHKAKSKLNPHGLYTPLPVPSA 1265
Query: 203 PWIDISMDFMLGLPRSKRGRDSVFVVVDRFSKMAHFIPCHNMNDASHVADL 355
PW DISMDF+LGLPR+KRGRDS+FVVVDRFSKMAHFIPCH +DASH+A L
Sbjct: 1266 PWEDISMDFVLGLPRTKRGRDSIFVVVDRFSKMAHFIPCHKSDDASHIASL 1316
Score = 44.3 bits (103), Expect(2) = 3e-52
Identities = 20/24 (83%), Positives = 21/24 (87%)
Frame = +1
Query: 352 FVREIVRLHGMPRTIVSDRDAKFL 423
F EIVRLHGMP+TIVSDRD KFL
Sbjct: 1317 FFSEIVRLHGMPKTIVSDRDTKFL 1340
>ref|NP_001063540.1| Os09g0491900 [Oryza sativa Japonica Group]
gi|113631773|dbj|BAF25454.1| Os09g0491900 [Oryza sativa
Japonica Group]
Length = 681
Score = 187 bits (474), Expect(2) = 3e-52
Identities = 82/111 (73%), Positives = 96/111 (86%)
Frame = +2
Query: 23 GGLMGHFGVAKTLAILQEHFYWPHMKRDVERICGRCVTCRQAKSRVPPHGLYTPLPIPST 202
GGLMGHFG KT +L +HFYWP M+RDV+R+ RCVTC +AKS++ PHGLYTPLP+PS
Sbjct: 174 GGLMGHFGWRKTYDMLADHFYWPKMRRDVQRLVQRCVTCHKAKSKLNPHGLYTPLPVPSA 233
Query: 203 PWIDISMDFMLGLPRSKRGRDSVFVVVDRFSKMAHFIPCHNMNDASHVADL 355
PW DISMDF+LGLPR+KRGRDS+FVVVDRFSKMAHFIPCH +DASH+A L
Sbjct: 234 PWEDISMDFVLGLPRTKRGRDSIFVVVDRFSKMAHFIPCHKSDDASHIASL 284
Score = 44.3 bits (103), Expect(2) = 3e-52
Identities = 20/24 (83%), Positives = 21/24 (87%)
Frame = +1
Query: 352 FVREIVRLHGMPRTIVSDRDAKFL 423
F EIVRLHGMP+TIVSDRD KFL
Sbjct: 285 FFSEIVRLHGMPKTIVSDRDTKFL 308
>gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group]
gi|52353557|gb|AAU44123.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 681
Score = 187 bits (474), Expect(2) = 3e-52
Identities = 82/111 (73%), Positives = 96/111 (86%)
Frame = +2
Query: 23 GGLMGHFGVAKTLAILQEHFYWPHMKRDVERICGRCVTCRQAKSRVPPHGLYTPLPIPST 202
GGLMGHFG KT +L +HFYWP M+RDV+R+ RCVTC +AKS++ PHGLYTPLP+PS
Sbjct: 174 GGLMGHFGWRKTYDMLADHFYWPKMRRDVQRLVQRCVTCHKAKSKLNPHGLYTPLPVPSA 233
Query: 203 PWIDISMDFMLGLPRSKRGRDSVFVVVDRFSKMAHFIPCHNMNDASHVADL 355
PW DISMDF+LGLPR+KRGRDS+FVVVDRFSKMAHFIPCH +DASH+A L
Sbjct: 234 PWEDISMDFVLGLPRTKRGRDSIFVVVDRFSKMAHFIPCHKSDDASHIASL 284
Score = 44.3 bits (103), Expect(2) = 3e-52
Identities = 20/24 (83%), Positives = 21/24 (87%)
Frame = +1
Query: 352 FVREIVRLHGMPRTIVSDRDAKFL 423
F EIVRLHGMP+TIVSDRD KFL
Sbjct: 285 FFSEIVRLHGMPKTIVSDRDTKFL 308
>gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|15217296|gb|AAK92640.1|AC079634_1 Putative
retroelement [Oryza sativa Japonica Group]
gi|31431373|gb|AAP53161.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1708
Score = 186 bits (472), Expect(2) = 5e-52
Identities = 83/114 (72%), Positives = 96/114 (84%)
Frame = +2
Query: 23 GGLMGHFGVAKTLAILQEHFYWPHMKRDVERICGRCVTCRQAKSRVPPHGLYTPLPIPST 202
GGLMGHFGV KT IL +HF+WP M+RDVER RC TC++AK R+ PHGLY PLP+PS
Sbjct: 1231 GGLMGHFGVKKTEDILADHFFWPKMRRDVERFVARCTTCQKAKLRLNPHGLYMPLPVPSV 1290
Query: 203 PWIDISMDFMLGLPRSKRGRDSVFVVVDRFSKMAHFIPCHNMNDASHVADLLGR 364
PW DISMDF+LGLPR+K+GRDS+FVVVDRFSKMAHFIPCH +DA+HVADL R
Sbjct: 1291 PWEDISMDFVLGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKSDDATHVADLFFR 1344
Score = 44.3 bits (103), Expect(2) = 5e-52
Identities = 20/24 (83%), Positives = 21/24 (87%)
Frame = +1
Query: 352 FVREIVRLHGMPRTIVSDRDAKFL 423
F REIVRLHG+P TIVSDRD KFL
Sbjct: 1342 FFREIVRLHGVPNTIVSDRDTKFL 1365
>gb|AAQ56407.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1619
Score = 186 bits (472), Expect(2) = 5e-52
Identities = 83/114 (72%), Positives = 96/114 (84%)
Frame = +2
Query: 23 GGLMGHFGVAKTLAILQEHFYWPHMKRDVERICGRCVTCRQAKSRVPPHGLYTPLPIPST 202
GGLMGHFGV KT IL +H +WP M+RDVER RC TC++AKSR+ PHGLY PLP+PS
Sbjct: 1127 GGLMGHFGVKKTEDILADHLFWPKMRRDVERFVARCTTCQKAKSRLNPHGLYMPLPVPSV 1186
Query: 203 PWIDISMDFMLGLPRSKRGRDSVFVVVDRFSKMAHFIPCHNMNDASHVADLLGR 364
PW DISMDF+LGLPR+K+GRDS+FVVVDRFSKMAHFIPCH +DA+HVADL R
Sbjct: 1187 PWEDISMDFVLGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKSDDATHVADLFFR 1240
Score = 44.3 bits (103), Expect(2) = 5e-52
Identities = 20/24 (83%), Positives = 21/24 (87%)
Frame = +1
Query: 352 FVREIVRLHGMPRTIVSDRDAKFL 423
F REIVRLHG+P TIVSDRD KFL
Sbjct: 1238 FFREIVRLHGVPNTIVSDRDTKFL 1261
>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
gi|31431012|gb|AAP52850.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 2447
Score = 184 bits (468), Expect(2) = 1e-51
Identities = 82/114 (71%), Positives = 94/114 (82%)
Frame = +2
Query: 23 GGLMGHFGVAKTLAILQEHFYWPHMKRDVERICGRCVTCRQAKSRVPPHGLYTPLPIPST 202
GGLMGHFG KT IL HF+WP M+RDV R RC TC++AKSR+ PHGLY PLP+P+
Sbjct: 1203 GGLMGHFGAKKTHDILASHFFWPQMRRDVGRFVARCATCQKAKSRLHPHGLYMPLPVPTV 1262
Query: 203 PWIDISMDFMLGLPRSKRGRDSVFVVVDRFSKMAHFIPCHNMNDASHVADLLGR 364
PW DISMDF+LGLPR+KRGRDS+FVVVDRFSKMAHFIPCH +DASH+ADL R
Sbjct: 1263 PWEDISMDFVLGLPRTKRGRDSIFVVVDRFSKMAHFIPCHKTDDASHIADLFFR 1316
Score = 44.3 bits (103), Expect(2) = 1e-51
Identities = 20/24 (83%), Positives = 21/24 (87%)
Frame = +1
Query: 352 FVREIVRLHGMPRTIVSDRDAKFL 423
F REIVRLHG+P TIVSDRD KFL
Sbjct: 1314 FFREIVRLHGVPNTIVSDRDTKFL 1337
Score = 84.0 bits (206), Expect(2) = 2e-17
Identities = 41/107 (38%), Positives = 62/107 (57%), Gaps = 1/107 (0%)
Frame = +2
Query: 38 HFGVAKTLAILQEHFYWPHMKRDVERICGRCVTCRQAKSRVP-PHGLYTPLPIPSTPWID 214
H G K L+E ++W MKR++ C C++ K+ P GL PL +P W +
Sbjct: 2029 HPGSTKMYLDLKEKYWWVSMKREIAEFVALCDVCQRVKAEHQRPAGLLQPLQVPEWKWDE 2088
Query: 215 ISMDFMLGLPRSKRGRDSVFVVVDRFSKMAHFIPCHNMNDASHVADL 355
I MDF+ GLP+++ G DS++VVVDR +K+A FIP + +A+L
Sbjct: 2089 IGMDFITGLPKTQGGYDSIWVVVDRLTKVARFIPVKTTYGGNKLAEL 2135
Score = 30.8 bits (68), Expect(2) = 2e-17
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = +1
Query: 352 FVREIVRLHGMPRTIVSDRDAKF 420
+ IV LHG+P+ IVSDR+++F
Sbjct: 2136 YFARIVSLHGVPKKIVSDRESQF 2158