BLASTX nr result

ID: Akebia26_contig00034266 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia26_contig00034266
         (349 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31584.3| unnamed protein product [Vitis vinifera]               48   1e-06
ref|XP_002277071.2| PREDICTED: rop guanine nucleotide exchange f...    48   1e-06
ref|XP_002323531.2| hypothetical protein POPTR_0016s10130g [Popu...    48   5e-06

>emb|CBI31584.3| unnamed protein product [Vitis vinifera]
          Length = 814

 Score = 48.1 bits (113), Expect(2) = 1e-06
 Identities = 22/40 (55%), Positives = 28/40 (70%)
 Frame = -2

Query: 258 LGWPNRKPEAQNCSMSDVTGDEDKPHLKDMKLEN*GSKIS 139
           LGWP RK E +  S+SDV+ DE K HL D K++  GSK+S
Sbjct: 60  LGWPIRKAEVRKSSVSDVSEDETKSHLNDSKVKQLGSKVS 99



 Score = 30.0 bits (66), Expect(2) = 1e-06
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = -3

Query: 44  EIEMMKERFSKLLL 3
           EIEMMKERFSKLLL
Sbjct: 100 EIEMMKERFSKLLL 113


>ref|XP_002277071.2| PREDICTED: rop guanine nucleotide exchange factor 1 [Vitis
           vinifera]
          Length = 571

 Score = 48.1 bits (113), Expect(2) = 1e-06
 Identities = 22/40 (55%), Positives = 28/40 (70%)
 Frame = -2

Query: 258 LGWPNRKPEAQNCSMSDVTGDEDKPHLKDMKLEN*GSKIS 139
           LGWP RK E +  S+SDV+ DE K HL D K++  GSK+S
Sbjct: 60  LGWPIRKAEVRKSSVSDVSEDETKSHLNDSKVKQLGSKVS 99



 Score = 30.0 bits (66), Expect(2) = 1e-06
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = -3

Query: 44  EIEMMKERFSKLLL 3
           EIEMMKERFSKLLL
Sbjct: 100 EIEMMKERFSKLLL 113


>ref|XP_002323531.2| hypothetical protein POPTR_0016s10130g [Populus trichocarpa]
           gi|550321195|gb|EEF05292.2| hypothetical protein
           POPTR_0016s10130g [Populus trichocarpa]
          Length = 721

 Score = 47.8 bits (112), Expect(2) = 5e-06
 Identities = 23/45 (51%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
 Frame = -2

Query: 258 LGWPNRKPEAQNC-SMSDVTGDEDKPHLKDMKLEN*GSKISGM*W 127
           LGWP +K E  +C S +  T DE+K H  D KLE  GS ISG+ W
Sbjct: 153 LGWPVQKDEVSDCTSTNSATDDEEKSHFDDRKLEKQGSSISGIDW 197



 Score = 28.1 bits (61), Expect(2) = 5e-06
 Identities = 13/14 (92%), Positives = 13/14 (92%)
 Frame = -3

Query: 44  EIEMMKERFSKLLL 3
           E EMMKERFSKLLL
Sbjct: 225 ETEMMKERFSKLLL 238


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