BLASTX nr result
ID: Akebia26_contig00034252
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia26_contig00034252
(406 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002274999.1| PREDICTED: pentatricopeptide repeat-containi... 219 3e-55
ref|XP_002306238.1| hypothetical protein POPTR_0005s06190g [Popu... 208 7e-52
gb|EXB66635.1| hypothetical protein L484_024932 [Morus notabilis] 207 2e-51
ref|XP_007148751.1| hypothetical protein PHAVU_005G011000g [Phas... 196 3e-48
ref|XP_003523930.1| PREDICTED: pentatricopeptide repeat-containi... 194 8e-48
ref|XP_004499603.1| PREDICTED: pentatricopeptide repeat-containi... 193 2e-47
ref|XP_004173017.1| PREDICTED: pentatricopeptide repeat-containi... 182 3e-44
ref|XP_004147372.1| PREDICTED: pentatricopeptide repeat-containi... 182 3e-44
gb|EMT33270.1| Pentatricopeptide repeat-containing protein [Aegi... 179 3e-43
ref|XP_002443200.1| hypothetical protein SORBIDRAFT_08g015300 [S... 177 1e-42
gb|AGY35718.1| SMK1 [Zea mays] 170 2e-40
tpg|DAA41672.1| TPA: hypothetical protein ZEAMMB73_535355 [Zea m... 170 2e-40
ref|XP_003576175.1| PREDICTED: pentatricopeptide repeat-containi... 169 4e-40
ref|XP_003576177.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 163 2e-38
ref|XP_006663297.1| PREDICTED: pentatricopeptide repeat-containi... 162 3e-38
ref|NP_001067495.1| Os11g0213500 [Oryza sativa Japonica Group] g... 161 8e-38
gb|ACM17537.1| putative pentatricopeptide [Oryza australiensis] 161 8e-38
gb|EAY80351.1| hypothetical protein OsI_35522 [Oryza sativa Indi... 161 8e-38
ref|NP_191302.2| protein ORGANELLE TRANSCRIPT PROCESSING 84 [Ara... 157 1e-36
gb|AAP40452.1| unknown protein [Arabidopsis thaliana] 157 1e-36
>ref|XP_002274999.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
[Vitis vinifera] gi|296088567|emb|CBI37558.3| unnamed
protein product [Vitis vinifera]
Length = 492
Score = 219 bits (558), Expect = 3e-55
Identities = 101/134 (75%), Positives = 118/134 (88%)
Frame = +1
Query: 4 GKEIHGQVLKSIVFNGDVAIGNSLIDMYAKCGCLDDSQNVFRYMVDLNLVTWTTLISCYG 183
GKEIHGQV+K+ +F +VAIGNSLIDMYAKCGCL DS+ VF M +LNLVTWT++ISCYG
Sbjct: 227 GKEIHGQVVKNQIFGCEVAIGNSLIDMYAKCGCLHDSEKVFTTMSELNLVTWTSMISCYG 286
Query: 184 VHGKGQESLILFEKMIISGFKPNCVTLTAILSSCSHSGLINQGKRIFYSMSLDYGIEPSV 363
VHGKG E+L LF+KM GF+PNCVT+TAIL+SCSHSGLI QG++IFYS++LDYG EPS
Sbjct: 287 VHGKGHEALALFKKMKYCGFQPNCVTITAILASCSHSGLIEQGRKIFYSINLDYGFEPSA 346
Query: 364 EHYACMVDLLGRFG 405
EHYACMVDLLGRFG
Sbjct: 347 EHYACMVDLLGRFG 360
Score = 62.0 bits (149), Expect = 8e-08
Identities = 38/133 (28%), Positives = 70/133 (52%)
Frame = +1
Query: 7 KEIHGQVLKSIVFNGDVAIGNSLIDMYAKCGCLDDSQNVFRYMVDLNLVTWTTLISCYGV 186
K+ H Q+L F ++ + L+ +Y+KCG L D++ VF MV+ N+ +W LI+ Y
Sbjct: 26 KQTHAQILVH-GFIPNITLQTDLLLVYSKCGVLQDARKVFDKMVERNMHSWNILIASYAH 84
Query: 187 HGKGQESLILFEKMIISGFKPNCVTLTAILSSCSHSGLINQGKRIFYSMSLDYGIEPSVE 366
+ ++L +F+ + GF+P+ TL + +C+ G GK + +S + G E V
Sbjct: 85 NCFFYDALGVFDSFLKMGFRPDHFTLPPVFKACAGIGDSYLGK-MLHSWVIRIGFEEYVV 143
Query: 367 HYACMVDLLGRFG 405
+ ++D + G
Sbjct: 144 VGSSVLDFYAKCG 156
Score = 58.2 bits (139), Expect = 1e-06
Identities = 37/106 (34%), Positives = 56/106 (52%)
Frame = +1
Query: 4 GKEIHGQVLKSIVFNGDVAIGNSLIDMYAKCGCLDDSQNVFRYMVDLNLVTWTTLISCYG 183
GK +H V++ I F V +G+S++D YAKCG L D+ F M + V W +I G
Sbjct: 126 GKMLHSWVIR-IGFEEYVVVGSSVLDFYAKCGGLVDAWRCFVNMSWRDSVVWNLMIVGLG 184
Query: 184 VHGKGQESLILFEKMIISGFKPNCVTLTAILSSCSHSGLINQGKRI 321
+++L F M+ G K + T+ +ILS C G + +GK I
Sbjct: 185 KACFFRDALECFRDMLSEGVKMDSRTVPSILSVCGGEGDLMKGKEI 230
>ref|XP_002306238.1| hypothetical protein POPTR_0005s06190g [Populus trichocarpa]
gi|222855687|gb|EEE93234.1| hypothetical protein
POPTR_0005s06190g [Populus trichocarpa]
Length = 512
Score = 208 bits (529), Expect = 7e-52
Identities = 98/134 (73%), Positives = 115/134 (85%)
Frame = +1
Query: 4 GKEIHGQVLKSIVFNGDVAIGNSLIDMYAKCGCLDDSQNVFRYMVDLNLVTWTTLISCYG 183
GKEIHG+V+KS +FN DV I NSLIDMYA+CGCL+DS+ VFR M LN+VTWTT+ISCYG
Sbjct: 227 GKEIHGRVVKSTLFNVDVVISNSLIDMYARCGCLNDSEKVFRNMRSLNVVTWTTMISCYG 286
Query: 184 VHGKGQESLILFEKMIISGFKPNCVTLTAILSSCSHSGLINQGKRIFYSMSLDYGIEPSV 363
VHG+ +ESL +F+KM G KPN VTLTA+L+SCSHSGLI++G+RIFYSM YG EPSV
Sbjct: 287 VHGRAEESLEVFKKMKGFGLKPNPVTLTAVLASCSHSGLIDEGRRIFYSMQSHYGFEPSV 346
Query: 364 EHYACMVDLLGRFG 405
EHYACMVDLLGRFG
Sbjct: 347 EHYACMVDLLGRFG 360
Score = 57.0 bits (136), Expect = 3e-06
Identities = 34/106 (32%), Positives = 59/106 (55%)
Frame = +1
Query: 4 GKEIHGQVLKSIVFNGDVAIGNSLIDMYAKCGCLDDSQNVFRYMVDLNLVTWTTLISCYG 183
G +HG V++ + F G V +G+S++D Y K G L +++ VF M+ + W +IS +G
Sbjct: 126 GFVLHGWVIR-LGFEGYVVVGSSVLDFYLKGGKLVEAKRVFSNMLWRDCGVWNLMISGFG 184
Query: 184 VHGKGQESLILFEKMIISGFKPNCVTLTAILSSCSHSGLINQGKRI 321
G E+L L M+ K + + + +IL++C G + +GK I
Sbjct: 185 RAGFYVEALSLVRNMVEEEEKLDALVVPSILNACGGEGDLMKGKEI 230
>gb|EXB66635.1| hypothetical protein L484_024932 [Morus notabilis]
Length = 496
Score = 207 bits (526), Expect = 2e-51
Identities = 94/134 (70%), Positives = 118/134 (88%)
Frame = +1
Query: 4 GKEIHGQVLKSIVFNGDVAIGNSLIDMYAKCGCLDDSQNVFRYMVDLNLVTWTTLISCYG 183
GKE+HGQV K++++ DVAIGNSLIDMYAKCGCL ++ VFR + +LN++TWTT+ISCYG
Sbjct: 228 GKEVHGQVSKNLLYGKDVAIGNSLIDMYAKCGCLYYAEKVFRSITNLNILTWTTMISCYG 287
Query: 184 VHGKGQESLILFEKMIISGFKPNCVTLTAILSSCSHSGLINQGKRIFYSMSLDYGIEPSV 363
+HGKG++SL++++KM+ GFKPNCVTLTAIL+SCSHSGLI++G RIF S+S Y EPSV
Sbjct: 288 LHGKGKDSLLIYKKMVDCGFKPNCVTLTAILASCSHSGLIDEGWRIFNSISSVYSFEPSV 347
Query: 364 EHYACMVDLLGRFG 405
EHYACMVDLLGRFG
Sbjct: 348 EHYACMVDLLGRFG 361
Score = 55.8 bits (133), Expect = 6e-06
Identities = 37/133 (27%), Positives = 66/133 (49%)
Frame = +1
Query: 7 KEIHGQVLKSIVFNGDVAIGNSLIDMYAKCGCLDDSQNVFRYMVDLNLVTWTTLISCYGV 186
++ H QVL + + V + L+ Y+KC L D++ VF M D+N+ +W LI +
Sbjct: 27 RQTHAQVLVHGLLS-HVTLQTDLLLAYSKCRFLQDARQVFDKMRDINMHSWNILIFSHVQ 85
Query: 187 HGKGQESLILFEKMIISGFKPNCVTLTAILSSCSHSGLINQGKRIFYSMSLDYGIEPSVE 366
+ +L LF+ +G +P+ TL + +C+ +G G R+ Y + G+E V
Sbjct: 86 NSMYSAALELFDAFRKTGLRPDHYTLPPLFKACAGTGDGFLG-RVLYGWVIKLGLEGCVV 144
Query: 367 HYACMVDLLGRFG 405
+ +D +FG
Sbjct: 145 VNSSFLDFCVKFG 157
>ref|XP_007148751.1| hypothetical protein PHAVU_005G011000g [Phaseolus vulgaris]
gi|561022015|gb|ESW20745.1| hypothetical protein
PHAVU_005G011000g [Phaseolus vulgaris]
Length = 443
Score = 196 bits (498), Expect = 3e-48
Identities = 92/133 (69%), Positives = 111/133 (83%)
Frame = +1
Query: 7 KEIHGQVLKSIVFNGDVAIGNSLIDMYAKCGCLDDSQNVFRYMVDLNLVTWTTLISCYGV 186
+E+HG V++S F+ D AIGN+LID+Y KCGCL DS+ VFR M LNLVTWTT+ISCYG
Sbjct: 222 REVHGHVVRSFGFDVDAAIGNALIDVYGKCGCLKDSEKVFRTMHFLNLVTWTTMISCYGA 281
Query: 187 HGKGQESLILFEKMIISGFKPNCVTLTAILSSCSHSGLINQGKRIFYSMSLDYGIEPSVE 366
HGKG+ESL+LF+KM+ GF+PN VTLTAIL+SCS SGLI+QGK+IF S+ DYG EP+VE
Sbjct: 282 HGKGEESLLLFKKMVDEGFRPNPVTLTAILTSCSRSGLIDQGKQIFSSICSDYGFEPTVE 341
Query: 367 HYACMVDLLGRFG 405
HYACMVDLL R G
Sbjct: 342 HYACMVDLLSRRG 354
Score = 57.8 bits (138), Expect = 2e-06
Identities = 32/135 (23%), Positives = 69/135 (51%), Gaps = 1/135 (0%)
Frame = +1
Query: 4 GKEIHGQVLKSIVFNGDVAIGNSLIDMYAKCGCLDDSQNVFRYMVDLNLVTWTTLISCYG 183
G HG V++ + + G V + NS+++ Y K G + + VF M+ + VTW +I +G
Sbjct: 119 GSTCHGLVIR-LGYEGYVVVANSVLEFYVKYGAVSQACCVFSNMLCTDSVTWNLMILGFG 177
Query: 184 VHGKGQESLILFEKMI-ISGFKPNCVTLTAILSSCSHSGLINQGKRIFYSMSLDYGIEPS 360
G ++ F +M+ + G + + +TL ++L++C G + + + + + +G +
Sbjct: 178 RAGLCSNAMHCFREMLSLGGMRVDFMTLPSVLNACGKEGDLLKVREVHGHVVRSFGFDVD 237
Query: 361 VEHYACMVDLLGRFG 405
++D+ G+ G
Sbjct: 238 AAIGNALIDVYGKCG 252
>ref|XP_003523930.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Glycine max]
Length = 481
Score = 194 bits (494), Expect = 8e-48
Identities = 88/133 (66%), Positives = 111/133 (83%)
Frame = +1
Query: 7 KEIHGQVLKSIVFNGDVAIGNSLIDMYAKCGCLDDSQNVFRYMVDLNLVTWTTLISCYGV 186
+E+HG V++S F+ D AIGN+LID+Y KCGCL+DS+ +FR + +NLVTWTT+ISCYG
Sbjct: 231 REVHGYVVRSFGFDADAAIGNALIDVYCKCGCLNDSEKIFRTIRHVNLVTWTTMISCYGA 290
Query: 187 HGKGQESLILFEKMIISGFKPNCVTLTAILSSCSHSGLINQGKRIFYSMSLDYGIEPSVE 366
HGKG+ESL+LF+KM+ GF+PN VTLTAIL+SCS SG+I+QGK IF S+ DYG EP+VE
Sbjct: 291 HGKGEESLLLFKKMVDEGFRPNPVTLTAILASCSRSGMIDQGKHIFSSICSDYGFEPTVE 350
Query: 367 HYACMVDLLGRFG 405
HYACMVDLL R G
Sbjct: 351 HYACMVDLLSRCG 363
>ref|XP_004499603.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like isoform X1 [Cicer arietinum]
Length = 498
Score = 193 bits (491), Expect = 2e-47
Identities = 90/133 (67%), Positives = 109/133 (81%)
Frame = +1
Query: 7 KEIHGQVLKSIVFNGDVAIGNSLIDMYAKCGCLDDSQNVFRYMVDLNLVTWTTLISCYGV 186
KE+HG ++++ F DV IGN+LID Y KCGCL DS+NVF+ M +NLVT TT+ISC+G+
Sbjct: 225 KEVHGFIVRNFSFGVDVPIGNALIDNYGKCGCLKDSENVFKTMSCVNLVTLTTMISCFGM 284
Query: 187 HGKGQESLILFEKMIISGFKPNCVTLTAILSSCSHSGLINQGKRIFYSMSLDYGIEPSVE 366
HGKG+ES+ LFEKMI GFKPN VTLTAIL+SCSHSGL++QGK+IF SM DYG EP+ E
Sbjct: 285 HGKGEESVFLFEKMIHEGFKPNAVTLTAILASCSHSGLVDQGKKIFNSMISDYGFEPTAE 344
Query: 367 HYACMVDLLGRFG 405
HYACMVDL GR G
Sbjct: 345 HYACMVDLFGRCG 357
>ref|XP_004173017.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Cucumis sativus]
Length = 472
Score = 182 bits (463), Expect = 3e-44
Identities = 90/134 (67%), Positives = 106/134 (79%)
Frame = +1
Query: 4 GKEIHGQVLKSIVFNGDVAIGNSLIDMYAKCGCLDDSQNVFRYMVDLNLVTWTTLISCYG 183
GKEIH VLKS VF DVA+GNSLIDMY+KCG L +S+ VF M LN+VTWTT+ISCYG
Sbjct: 198 GKEIHCLVLKSPVFAADVAVGNSLIDMYSKCGSLLNSEKVFWNMSRLNIVTWTTMISCYG 257
Query: 184 VHGKGQESLILFEKMIISGFKPNCVTLTAILSSCSHSGLINQGKRIFYSMSLDYGIEPSV 363
HGKG++SL+LF KM G +PN VTLTAIL+SCSH+G IN+G RIF S+ D +EP+V
Sbjct: 258 AHGKGEKSLVLFNKMKDCGIQPNSVTLTAILASCSHAGYINEGWRIFQSIISDNKVEPTV 317
Query: 364 EHYACMVDLLGRFG 405
EHYAC VDLL RFG
Sbjct: 318 EHYACAVDLLSRFG 331
Score = 75.9 bits (185), Expect = 6e-12
Identities = 36/106 (33%), Positives = 67/106 (63%)
Frame = +1
Query: 4 GKEIHGQVLKSIVFNGDVAIGNSLIDMYAKCGCLDDSQNVFRYMVDLNLVTWTTLISCYG 183
GK +H +K + F G V +G++++D YAKCG + D++ VF M+ + V+W ++IS YG
Sbjct: 97 GKRLHCWTIK-LGFVGYVVVGSTVLDFYAKCGIVGDARKVFDDMIFKDTVSWNSMISGYG 155
Query: 184 VHGKGQESLILFEKMIISGFKPNCVTLTAILSSCSHSGLINQGKRI 321
G ++L F++M++ G + +T+ ++L++C G + +GK I
Sbjct: 156 RAGVYMDALDCFKRMLLEGANMDFMTIPSVLNACGGEGDLRKGKEI 201
>ref|XP_004147372.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Cucumis sativus]
Length = 502
Score = 182 bits (463), Expect = 3e-44
Identities = 90/134 (67%), Positives = 106/134 (79%)
Frame = +1
Query: 4 GKEIHGQVLKSIVFNGDVAIGNSLIDMYAKCGCLDDSQNVFRYMVDLNLVTWTTLISCYG 183
GKEIH VLKS VF DVA+GNSLIDMY+KCG L +S+ VF M LN+VTWTT+ISCYG
Sbjct: 228 GKEIHCLVLKSPVFAADVAVGNSLIDMYSKCGSLLNSEKVFWNMSRLNIVTWTTMISCYG 287
Query: 184 VHGKGQESLILFEKMIISGFKPNCVTLTAILSSCSHSGLINQGKRIFYSMSLDYGIEPSV 363
HGKG++SL+LF KM G +PN VTLTAIL+SCSH+G IN+G RIF S+ D +EP+V
Sbjct: 288 AHGKGEKSLVLFNKMKDCGIQPNSVTLTAILASCSHAGYINEGWRIFQSIISDNKVEPTV 347
Query: 364 EHYACMVDLLGRFG 405
EHYAC VDLL RFG
Sbjct: 348 EHYACAVDLLSRFG 361
Score = 75.9 bits (185), Expect = 6e-12
Identities = 36/106 (33%), Positives = 67/106 (63%)
Frame = +1
Query: 4 GKEIHGQVLKSIVFNGDVAIGNSLIDMYAKCGCLDDSQNVFRYMVDLNLVTWTTLISCYG 183
GK +H +K + F G V +G++++D YAKCG + D++ VF M+ + V+W ++IS YG
Sbjct: 127 GKRLHCWTIK-LGFVGYVVVGSTVLDFYAKCGIVGDARKVFDDMIFKDTVSWNSMISGYG 185
Query: 184 VHGKGQESLILFEKMIISGFKPNCVTLTAILSSCSHSGLINQGKRI 321
G ++L F++M++ G + +T+ ++L++C G + +GK I
Sbjct: 186 RAGVYMDALDCFKRMLLEGANMDFMTIPSVLNACGGEGDLRKGKEI 231
>gb|EMT33270.1| Pentatricopeptide repeat-containing protein [Aegilops tauschii]
Length = 419
Score = 179 bits (455), Expect = 3e-43
Identities = 81/134 (60%), Positives = 109/134 (81%)
Frame = +1
Query: 4 GKEIHGQVLKSIVFNGDVAIGNSLIDMYAKCGCLDDSQNVFRYMVDLNLVTWTTLISCYG 183
G+EIHG++++S+ F+ DV IGN+LIDMYAKCG +D SQ VF M + N+V+W+TLISCYG
Sbjct: 159 GREIHGRMVRSLAFDLDVPIGNTLIDMYAKCGRVDASQAVFAGMQERNVVSWSTLISCYG 218
Query: 184 VHGKGQESLILFEKMIISGFKPNCVTLTAILSSCSHSGLINQGKRIFYSMSLDYGIEPSV 363
VHGKG+++L ++E+M+ KPNC+T T++LSSCSHSGL+ G+ IF SM +G+EP+
Sbjct: 219 VHGKGKQALHVYEEMLSQSVKPNCITFTSVLSSCSHSGLVTDGRMIFESMRKVHGVEPTS 278
Query: 364 EHYACMVDLLGRFG 405
EHYACMVDLLGR G
Sbjct: 279 EHYACMVDLLGRAG 292
>ref|XP_002443200.1| hypothetical protein SORBIDRAFT_08g015300 [Sorghum bicolor]
gi|241943893|gb|EES17038.1| hypothetical protein
SORBIDRAFT_08g015300 [Sorghum bicolor]
Length = 502
Score = 177 bits (449), Expect = 1e-42
Identities = 77/134 (57%), Positives = 108/134 (80%)
Frame = +1
Query: 4 GKEIHGQVLKSIVFNGDVAIGNSLIDMYAKCGCLDDSQNVFRYMVDLNLVTWTTLISCYG 183
G+EIHG++++ F+ D+A+GN+L+DMYAKCG +D +Q VF M N+++W+TLISCYG
Sbjct: 225 GREIHGRMVRCFAFDSDIAVGNALVDMYAKCGQVDGAQAVFASMKVRNVMSWSTLISCYG 284
Query: 184 VHGKGQESLILFEKMIISGFKPNCVTLTAILSSCSHSGLINQGKRIFYSMSLDYGIEPSV 363
VHG G+E+L ++E+M+ G KPNC+T +ILSSCSHSGL++ G+RIF SMS + +EP+
Sbjct: 285 VHGMGKEALRIYEEMVSRGVKPNCITFISILSSCSHSGLVSDGRRIFESMSKVHAVEPTA 344
Query: 364 EHYACMVDLLGRFG 405
+HYACMVDLLGR G
Sbjct: 345 DHYACMVDLLGRAG 358
Score = 59.3 bits (142), Expect = 5e-07
Identities = 36/136 (26%), Positives = 66/136 (48%), Gaps = 2/136 (1%)
Frame = +1
Query: 4 GKEIHGQVLKSIVFNGDVAIGNSLIDMYAKCGCLDDSQNVFRYMVDLNLVTWTTLISCYG 183
G HG L+ + +V + +L+DMYAK G L D+ VF M + + V W +++ Y
Sbjct: 122 GAVFHGLALR-LGLLANVVVSGALLDMYAKTGMLADATRVFDEMPERDAVVWNCMVTGYA 180
Query: 184 VHGKGQESLILFEKMIISG--FKPNCVTLTAILSSCSHSGLINQGKRIFYSMSLDYGIEP 357
G+ +E+L LF K I + + +L+ C++ G + +G+ I M + +
Sbjct: 181 RAGRSEETLELFRKAQIESVDMARDLRAVPNVLNVCANEGQLMKGREIHGRMVRCFAFDS 240
Query: 358 SVEHYACMVDLLGRFG 405
+ +VD+ + G
Sbjct: 241 DIAVGNALVDMYAKCG 256
>gb|AGY35718.1| SMK1 [Zea mays]
Length = 506
Score = 170 bits (430), Expect = 2e-40
Identities = 75/134 (55%), Positives = 104/134 (77%)
Frame = +1
Query: 4 GKEIHGQVLKSIVFNGDVAIGNSLIDMYAKCGCLDDSQNVFRYMVDLNLVTWTTLISCYG 183
G+EIHG++ + + + D +GN+LIDMY KCG +D +Q VF M + N+V+W++LISCYG
Sbjct: 229 GREIHGRMARCLASSSDTVVGNALIDMYGKCGQVDGAQAVFASMEEKNVVSWSSLISCYG 288
Query: 184 VHGKGQESLILFEKMIISGFKPNCVTLTAILSSCSHSGLINQGKRIFYSMSLDYGIEPSV 363
VHG G+E+L ++E+M+ G KPNCVT +ILSSCSHSGL++ G+RIF SM + +EP+
Sbjct: 289 VHGMGKEALRVYEEMVSVGVKPNCVTFVSILSSCSHSGLVSDGRRIFESMRKVHAVEPTA 348
Query: 364 EHYACMVDLLGRFG 405
+HYACMVDLLGR G
Sbjct: 349 DHYACMVDLLGRAG 362
Score = 60.5 bits (145), Expect = 2e-07
Identities = 36/136 (26%), Positives = 68/136 (50%), Gaps = 2/136 (1%)
Frame = +1
Query: 4 GKEIHGQVLKSIVFNGDVAIGNSLIDMYAKCGCLDDSQNVFRYMVDLNLVTWTTLISCYG 183
G +HG ++ + +V + +L+DMYAK G L D+ VF M + + V W +++ Y
Sbjct: 126 GSVLHGFAVR-LGLLANVVVSGALLDMYAKTGTLGDAGRVFDEMPERDAVAWNCMVTGYA 184
Query: 184 VHGKGQESLILFEKMII--SGFKPNCVTLTAILSSCSHSGLINQGKRIFYSMSLDYGIEP 357
G+ +E+L LF K I +G + + ++L+ C+ G + +G+ I M+
Sbjct: 185 RAGRSEETLELFRKAQIESAGMARDLRAVPSVLNVCADEGQLMKGREIHGRMARCLASSS 244
Query: 358 SVEHYACMVDLLGRFG 405
++D+ G+ G
Sbjct: 245 DTVVGNALIDMYGKCG 260
>tpg|DAA41672.1| TPA: hypothetical protein ZEAMMB73_535355 [Zea mays]
Length = 502
Score = 170 bits (430), Expect = 2e-40
Identities = 75/134 (55%), Positives = 104/134 (77%)
Frame = +1
Query: 4 GKEIHGQVLKSIVFNGDVAIGNSLIDMYAKCGCLDDSQNVFRYMVDLNLVTWTTLISCYG 183
G+EIHG++ + + + D +GN+LIDMY KCG +D +Q VF M + N+V+W++LISCYG
Sbjct: 225 GREIHGRMARCLASSSDTVVGNALIDMYGKCGQVDGAQAVFASMEEKNVVSWSSLISCYG 284
Query: 184 VHGKGQESLILFEKMIISGFKPNCVTLTAILSSCSHSGLINQGKRIFYSMSLDYGIEPSV 363
VHG G+E+L ++E+M+ G KPNCVT +ILSSCSHSGL++ G+RIF SM + +EP+
Sbjct: 285 VHGMGKEALRVYEEMVSVGVKPNCVTFVSILSSCSHSGLVSDGRRIFESMRKVHAVEPTA 344
Query: 364 EHYACMVDLLGRFG 405
+HYACMVDLLGR G
Sbjct: 345 DHYACMVDLLGRAG 358
Score = 60.5 bits (145), Expect = 2e-07
Identities = 36/136 (26%), Positives = 68/136 (50%), Gaps = 2/136 (1%)
Frame = +1
Query: 4 GKEIHGQVLKSIVFNGDVAIGNSLIDMYAKCGCLDDSQNVFRYMVDLNLVTWTTLISCYG 183
G +HG ++ + +V + +L+DMYAK G L D+ VF M + + V W +++ Y
Sbjct: 122 GSVLHGFAVR-LGLLANVVVSGALLDMYAKTGTLGDAGRVFDEMPERDAVAWNCMVTGYA 180
Query: 184 VHGKGQESLILFEKMII--SGFKPNCVTLTAILSSCSHSGLINQGKRIFYSMSLDYGIEP 357
G+ +E+L LF K I +G + + ++L+ C+ G + +G+ I M+
Sbjct: 181 RAGRSEETLELFRKAQIESAGMARDLRAVPSVLNVCADEGQLMKGREIHGRMARCLASSS 240
Query: 358 SVEHYACMVDLLGRFG 405
++D+ G+ G
Sbjct: 241 DTVVGNALIDMYGKCG 256
>ref|XP_003576175.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Brachypodium distachyon]
Length = 500
Score = 169 bits (428), Expect = 4e-40
Identities = 76/134 (56%), Positives = 107/134 (79%)
Frame = +1
Query: 4 GKEIHGQVLKSIVFNGDVAIGNSLIDMYAKCGCLDDSQNVFRYMVDLNLVTWTTLISCYG 183
G+EIHG++++ + F+ DV IGN+LIDMYAKCG +D S+ VF M++ N+V+W+TLISCYG
Sbjct: 225 GREIHGRMVRCLAFDSDVPIGNALIDMYAKCGHVDASRAVFAGMLERNVVSWSTLISCYG 284
Query: 184 VHGKGQESLILFEKMIISGFKPNCVTLTAILSSCSHSGLINQGKRIFYSMSLDYGIEPSV 363
VHGKG+E+L ++++M+ KPN +T ++LSSCSHSGL+ G+ IF SMS +G+EP+
Sbjct: 285 VHGKGKEALRIYKEMLSQRVKPNGITFMSVLSSCSHSGLVTDGRMIFESMSKVHGVEPTA 344
Query: 364 EHYACMVDLLGRFG 405
EHYA MVD+LGR G
Sbjct: 345 EHYASMVDILGRAG 358
Score = 59.3 bits (142), Expect = 5e-07
Identities = 34/136 (25%), Positives = 69/136 (50%), Gaps = 2/136 (1%)
Frame = +1
Query: 4 GKEIHGQVLKSIVFNGDVAIGNSLIDMYAKCGCLDDSQNVFRYMVDLNLVTWTTLISCYG 183
G +HG ++ F G+V + ++L+DMYAK G LD++ VF M + + V W +++ Y
Sbjct: 122 GAVLHGFAVQ-FGFLGNVVVSSALLDMYAKSGLLDNAARVFDEMPEKDSVVWNCMVTAYA 180
Query: 184 VHGKGQESLILFEK--MIISGFKPNCVTLTAILSSCSHSGLINQGKRIFYSMSLDYGIEP 357
G E+L +F + + + + ++ ++L++C G + +G+ I M +
Sbjct: 181 RAGMAAETLEIFRRAQVEVVNMARDLRSVPSVLNACGKEGELMKGREIHGRMVRCLAFDS 240
Query: 358 SVEHYACMVDLLGRFG 405
V ++D+ + G
Sbjct: 241 DVPIGNALIDMYAKCG 256
>ref|XP_003576177.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g12770-like [Brachypodium distachyon]
Length = 486
Score = 163 bits (413), Expect = 2e-38
Identities = 75/139 (53%), Positives = 106/139 (76%), Gaps = 7/139 (5%)
Frame = +1
Query: 10 EIHGQVLKSIVFNGDVAIGNSLIDMYAKCGCLDD-------SQNVFRYMVDLNLVTWTTL 168
EIHG++++ + F+ DV IGN+ IDMYAKCG +D SQ VF M+D N+V+W+TL
Sbjct: 224 EIHGRMVRCLAFDSDVPIGNASIDMYAKCGHVDSGISPTDSSQAVFAGMLDRNVVSWSTL 283
Query: 169 ISCYGVHGKGQESLILFEKMIISGFKPNCVTLTAILSSCSHSGLINQGKRIFYSMSLDYG 348
I+CYGVHGKG+E++ ++E+M+ FKPN +T +++SSCSHSGL+ G+ IF SMS +G
Sbjct: 284 IACYGVHGKGKEAVRIYEEMLPQRFKPNGITFMSVVSSCSHSGLVTDGRMIFESMSKVHG 343
Query: 349 IEPSVEHYACMVDLLGRFG 405
+EP+ EHYAC+VD+LGR G
Sbjct: 344 VEPTAEHYACVVDILGRAG 362
>ref|XP_006663297.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like, partial [Oryza brachyantha]
Length = 473
Score = 162 bits (411), Expect = 3e-38
Identities = 69/134 (51%), Positives = 106/134 (79%)
Frame = +1
Query: 4 GKEIHGQVLKSIVFNGDVAIGNSLIDMYAKCGCLDDSQNVFRYMVDLNLVTWTTLISCYG 183
G+EIHG++++ + F+ D+ +GN+LIDMYAKCG + SQ VF M + N+V+W+T+I YG
Sbjct: 200 GREIHGRMVRCLAFDSDIVVGNALIDMYAKCGRVHVSQEVFSRMRERNVVSWSTMIHSYG 259
Query: 184 VHGKGQESLILFEKMIISGFKPNCVTLTAILSSCSHSGLINQGKRIFYSMSLDYGIEPSV 363
+HG+G+++L + +M+ G KPN +T T++LSSCSHSGL+++G++IF S++ +G+ P+
Sbjct: 260 IHGRGEQALKAYREMLSRGVKPNSITFTSVLSSCSHSGLVSKGRKIFESITKVHGVCPAA 319
Query: 364 EHYACMVDLLGRFG 405
EHYACMVDLLGR G
Sbjct: 320 EHYACMVDLLGRAG 333
>ref|NP_001067495.1| Os11g0213500 [Oryza sativa Japonica Group]
gi|77549336|gb|ABA92133.1| pentatricopeptide, putative
[Oryza sativa Japonica Group]
gi|113644717|dbj|BAF27858.1| Os11g0213500 [Oryza sativa
Japonica Group] gi|125576589|gb|EAZ17811.1| hypothetical
protein OsJ_33354 [Oryza sativa Japonica Group]
gi|551700385|gb|AGY35719.1| SMK1 [Oryza sativa Japonica
Group]
Length = 470
Score = 161 bits (408), Expect = 8e-38
Identities = 69/134 (51%), Positives = 106/134 (79%)
Frame = +1
Query: 4 GKEIHGQVLKSIVFNGDVAIGNSLIDMYAKCGCLDDSQNVFRYMVDLNLVTWTTLISCYG 183
G+EIHG++++ + F+ D+A+GN+LI+MYAKCG ++ SQ VF M ++V+W+T+I Y
Sbjct: 225 GREIHGRMVRCLAFDSDIAVGNALINMYAKCGRVNVSQAVFSGMQQRDVVSWSTMIHSYS 284
Query: 184 VHGKGQESLILFEKMIISGFKPNCVTLTAILSSCSHSGLINQGKRIFYSMSLDYGIEPSV 363
+HGKG+++L ++ +M+ G KPN +T T++LSSCSHSGL+ +G++IF SM+ +G+ P+
Sbjct: 285 IHGKGEQALKVYMEMLSEGVKPNWITFTSVLSSCSHSGLVTEGRKIFESMTKVHGVHPAA 344
Query: 364 EHYACMVDLLGRFG 405
EHYACMVDLLGR G
Sbjct: 345 EHYACMVDLLGRAG 358
>gb|ACM17537.1| putative pentatricopeptide [Oryza australiensis]
Length = 470
Score = 161 bits (408), Expect = 8e-38
Identities = 69/134 (51%), Positives = 106/134 (79%)
Frame = +1
Query: 4 GKEIHGQVLKSIVFNGDVAIGNSLIDMYAKCGCLDDSQNVFRYMVDLNLVTWTTLISCYG 183
G+EIHG +++ + F+ D+A+GN+LI+MYAKCG ++ SQ VF M + ++V+W+T+I Y
Sbjct: 225 GREIHGMMVRCLAFDSDIAVGNALINMYAKCGRVNVSQAVFSGMQERDVVSWSTMIHSYS 284
Query: 184 VHGKGQESLILFEKMIISGFKPNCVTLTAILSSCSHSGLINQGKRIFYSMSLDYGIEPSV 363
+HGKG+++L ++ +M+ G KPN +T T++LSSCSHSGL+ +G++IF SM+ +G+ P+
Sbjct: 285 IHGKGEQALKVYMEMLSQGVKPNWITFTSVLSSCSHSGLVTEGQKIFESMTKVHGVHPAT 344
Query: 364 EHYACMVDLLGRFG 405
EHYACMVDLLGR G
Sbjct: 345 EHYACMVDLLGRAG 358
>gb|EAY80351.1| hypothetical protein OsI_35522 [Oryza sativa Indica Group]
Length = 470
Score = 161 bits (408), Expect = 8e-38
Identities = 69/134 (51%), Positives = 106/134 (79%)
Frame = +1
Query: 4 GKEIHGQVLKSIVFNGDVAIGNSLIDMYAKCGCLDDSQNVFRYMVDLNLVTWTTLISCYG 183
G+EIHG++++ + F+ D+A+GN+LI+MYAKCG ++ SQ VF M ++V+W+T+I Y
Sbjct: 225 GREIHGRMVRCLAFDSDIAVGNALINMYAKCGRVNVSQAVFSGMQQRDVVSWSTMIHSYS 284
Query: 184 VHGKGQESLILFEKMIISGFKPNCVTLTAILSSCSHSGLINQGKRIFYSMSLDYGIEPSV 363
+HGKG+++L ++ +M+ G KPN +T T++LSSCSHSGL+ +G++IF SM+ +G+ P+
Sbjct: 285 IHGKGEQALKVYMEMLSEGVKPNWITFTSVLSSCSHSGLVTEGRKIFESMTKVHGVHPAA 344
Query: 364 EHYACMVDLLGRFG 405
EHYACMVDLLGR G
Sbjct: 345 EHYACMVDLLGRAG 358
>ref|NP_191302.2| protein ORGANELLE TRANSCRIPT PROCESSING 84 [Arabidopsis thaliana]
gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g57430, chloroplastic; Flags: Precursor
gi|332646133|gb|AEE79654.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 890
Score = 157 bits (397), Expect = 1e-36
Identities = 70/134 (52%), Positives = 98/134 (73%)
Frame = +1
Query: 4 GKEIHGQVLKSIVFNGDVAIGNSLIDMYAKCGCLDDSQNVFRYMVDLNLVTWTTLISCYG 183
GKEIH +K+ + DVA+G++L+DMYAKCGCL S+ VF + N++TW +I YG
Sbjct: 536 GKEIHAYAIKNNLAT-DVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYG 594
Query: 184 VHGKGQESLILFEKMIISGFKPNCVTLTAILSSCSHSGLINQGKRIFYSMSLDYGIEPSV 363
+HG GQE++ L M++ G KPN VT ++ ++CSHSG++++G RIFY M DYG+EPS
Sbjct: 595 MHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSS 654
Query: 364 EHYACMVDLLGRFG 405
+HYAC+VDLLGR G
Sbjct: 655 DHYACVVDLLGRAG 668
Score = 66.2 bits (160), Expect = 4e-09
Identities = 44/142 (30%), Positives = 76/142 (53%), Gaps = 11/142 (7%)
Frame = +1
Query: 13 IHGQVLKSIVFNGDVAIGNSLIDMYAKCGCLDDSQNVFRYMVDLNLVTWTTLISCYGVHG 192
IHG V+K + + D + N+L+DMY++ G +D + +F M D +LVTW T+I+ Y
Sbjct: 427 IHGFVVKRGL-DRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSE 485
Query: 193 KGQESLILFEKM------IISG-----FKPNCVTLTAILSSCSHSGLINQGKRIFYSMSL 339
+++L+L KM + G KPN +TL IL SC+ + +GK I ++ ++
Sbjct: 486 HHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEI-HAYAI 544
Query: 340 DYGIEPSVEHYACMVDLLGRFG 405
+ V + +VD+ + G
Sbjct: 545 KNNLATDVAVGSALVDMYAKCG 566
Score = 59.7 bits (143), Expect = 4e-07
Identities = 36/135 (26%), Positives = 66/135 (48%), Gaps = 1/135 (0%)
Frame = +1
Query: 4 GKEIHGQVLKSIVFNGDVAIGNSLIDMYAKCGCLDDSQNVFRYMVDLNLVTWTTLISCYG 183
GKE+H LK+ + + +G++L+DMY C + + VF M D + W +I+ Y
Sbjct: 321 GKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYS 380
Query: 184 VHGKGQESLILFEKMIIS-GFKPNCVTLTAILSSCSHSGLINQGKRIFYSMSLDYGIEPS 360
+ +E+L+LF M S G N T+ ++ +C SG ++ K + + G++
Sbjct: 381 QNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSR-KEAIHGFVVKRGLDRD 439
Query: 361 VEHYACMVDLLGRFG 405
++D+ R G
Sbjct: 440 RFVQNTLMDMYSRLG 454
Score = 57.4 bits (137), Expect = 2e-06
Identities = 31/106 (29%), Positives = 58/106 (54%)
Frame = +1
Query: 4 GKEIHGQVLKSIVFNGDVAIGNSLIDMYAKCGCLDDSQNVFRYMVDLNLVTWTTLISCYG 183
GK++H L+ N + N+L+ MY K G L S+ + +LVTW T++S
Sbjct: 221 GKQVHAYGLRKGELNSFII--NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLC 278
Query: 184 VHGKGQESLILFEKMIISGFKPNCVTLTAILSSCSHSGLINQGKRI 321
+ + E+L +M++ G +P+ T++++L +CSH ++ GK +
Sbjct: 279 QNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKEL 324
Score = 56.6 bits (135), Expect = 4e-06
Identities = 30/96 (31%), Positives = 51/96 (53%)
Frame = +1
Query: 4 GKEIHGQVLKSIVFNGDVAIGNSLIDMYAKCGCLDDSQNVFRYMVDLNLVTWTTLISCYG 183
GK+IH V K V + N+L+++Y KCG VF + + N V+W +LIS
Sbjct: 116 GKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLC 175
Query: 184 VHGKGQESLILFEKMIISGFKPNCVTLTAILSSCSH 291
K + +L F M+ +P+ TL +++++CS+
Sbjct: 176 SFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSN 211
>gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
Length = 890
Score = 157 bits (397), Expect = 1e-36
Identities = 70/134 (52%), Positives = 98/134 (73%)
Frame = +1
Query: 4 GKEIHGQVLKSIVFNGDVAIGNSLIDMYAKCGCLDDSQNVFRYMVDLNLVTWTTLISCYG 183
GKEIH +K+ + DVA+G++L+DMYAKCGCL S+ VF + N++TW +I YG
Sbjct: 536 GKEIHAYAIKNNLAT-DVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYG 594
Query: 184 VHGKGQESLILFEKMIISGFKPNCVTLTAILSSCSHSGLINQGKRIFYSMSLDYGIEPSV 363
+HG GQE++ L M++ G KPN VT ++ ++CSHSG++++G RIFY M DYG+EPS
Sbjct: 595 MHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSS 654
Query: 364 EHYACMVDLLGRFG 405
+HYAC+VDLLGR G
Sbjct: 655 DHYACVVDLLGRAG 668
Score = 66.2 bits (160), Expect = 4e-09
Identities = 44/142 (30%), Positives = 76/142 (53%), Gaps = 11/142 (7%)
Frame = +1
Query: 13 IHGQVLKSIVFNGDVAIGNSLIDMYAKCGCLDDSQNVFRYMVDLNLVTWTTLISCYGVHG 192
IHG V+K + + D + N+L+DMY++ G +D + +F M D +LVTW T+I+ Y
Sbjct: 427 IHGFVVKRGL-DRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSE 485
Query: 193 KGQESLILFEKM------IISG-----FKPNCVTLTAILSSCSHSGLINQGKRIFYSMSL 339
+++L+L KM + G KPN +TL IL SC+ + +GK I ++ ++
Sbjct: 486 HHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEI-HAYAI 544
Query: 340 DYGIEPSVEHYACMVDLLGRFG 405
+ V + +VD+ + G
Sbjct: 545 KNNLATDVAVGSALVDMYAKCG 566
Score = 59.7 bits (143), Expect = 4e-07
Identities = 36/135 (26%), Positives = 66/135 (48%), Gaps = 1/135 (0%)
Frame = +1
Query: 4 GKEIHGQVLKSIVFNGDVAIGNSLIDMYAKCGCLDDSQNVFRYMVDLNLVTWTTLISCYG 183
GKE+H LK+ + + +G++L+DMY C + + VF M D + W +I+ Y
Sbjct: 321 GKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYS 380
Query: 184 VHGKGQESLILFEKMIIS-GFKPNCVTLTAILSSCSHSGLINQGKRIFYSMSLDYGIEPS 360
+ +E+L+LF M S G N T+ ++ +C SG ++ K + + G++
Sbjct: 381 QNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSR-KEAIHGFVVKRGLDRD 439
Query: 361 VEHYACMVDLLGRFG 405
++D+ R G
Sbjct: 440 RFVQNTLMDMYSRLG 454
Score = 57.4 bits (137), Expect = 2e-06
Identities = 31/106 (29%), Positives = 58/106 (54%)
Frame = +1
Query: 4 GKEIHGQVLKSIVFNGDVAIGNSLIDMYAKCGCLDDSQNVFRYMVDLNLVTWTTLISCYG 183
GK++H L+ N + N+L+ MY K G L S+ + +LVTW T++S
Sbjct: 221 GKQVHAYGLRKGELNSFII--NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLC 278
Query: 184 VHGKGQESLILFEKMIISGFKPNCVTLTAILSSCSHSGLINQGKRI 321
+ + E+L +M++ G +P+ T++++L +CSH ++ GK +
Sbjct: 279 QNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKEL 324
Score = 56.6 bits (135), Expect = 4e-06
Identities = 30/96 (31%), Positives = 51/96 (53%)
Frame = +1
Query: 4 GKEIHGQVLKSIVFNGDVAIGNSLIDMYAKCGCLDDSQNVFRYMVDLNLVTWTTLISCYG 183
GK+IH V K V + N+L+++Y KCG VF + + N V+W +LIS
Sbjct: 116 GKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLC 175
Query: 184 VHGKGQESLILFEKMIISGFKPNCVTLTAILSSCSH 291
K + +L F M+ +P+ TL +++++CS+
Sbjct: 176 SFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSN 211