BLASTX nr result

ID: Akebia26_contig00034035 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia26_contig00034035
         (434 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28253.3| unnamed protein product [Vitis vinifera]               73   4e-11
emb|CAN77039.1| hypothetical protein VITISV_036000 [Vitis vinifera]    73   4e-11
ref|XP_002325195.1| hypothetical protein POPTR_0018s12600g [Popu...    64   2e-08
ref|XP_007013558.1| SPOC domain / Transcription elongation facto...    59   5e-07
ref|XP_007013557.1| SPOC domain / Transcription elongation facto...    59   5e-07

>emb|CBI28253.3| unnamed protein product [Vitis vinifera]
          Length = 522

 Score = 73.2 bits (178), Expect = 4e-11
 Identities = 45/111 (40%), Positives = 60/111 (54%), Gaps = 2/111 (1%)
 Frame = +3

Query: 6   EKSDNGYDLPRPVIAAQPKIGKTHDGLAPDDDDLPEFDFNAACGPSN--INRVSNASQLD 179
           EK     +L +PV    P  G     L  DDDDLPEFDF  ACG S     +  +A  L+
Sbjct: 235 EKLKKSLELQKPVQPLPP--GAMKQPLPTDDDDLPEFDFRTACGASQTPTGKSFDAMALE 292

Query: 180 KRLPAIGGKNVGGSVPCTLPSIVQPMIIANQQRPQSPNFPGLPLDTRQGMP 332
           +RLP  G + +  SVP  +P++ Q M I NQ+  ++ +FP L  D  QGMP
Sbjct: 293 RRLPPEGFRKMDVSVPLVIPNL-QSMPILNQKSSENLSFPRLQTDADQGMP 342


>emb|CAN77039.1| hypothetical protein VITISV_036000 [Vitis vinifera]
          Length = 751

 Score = 73.2 bits (178), Expect = 4e-11
 Identities = 45/111 (40%), Positives = 60/111 (54%), Gaps = 2/111 (1%)
 Frame = +3

Query: 6   EKSDNGYDLPRPVIAAQPKIGKTHDGLAPDDDDLPEFDFNAACGPSN--INRVSNASQLD 179
           EK     +L +PV    P  G     L  DDDDLPEFDF  ACG S     +  +A  L+
Sbjct: 275 EKLKKSLELQKPVQPLPP--GAMKQPLPTDDDDLPEFDFRTACGASQTPTGKSFDAMALE 332

Query: 180 KRLPAIGGKNVGGSVPCTLPSIVQPMIIANQQRPQSPNFPGLPLDTRQGMP 332
           +RLP  G + +  SVP  +P++ Q M I NQ+  ++ +FP L  D  QGMP
Sbjct: 333 RRLPPEGFRKMDVSVPLVIPNL-QSMPILNQKSSENLSFPRLQTDADQGMP 382


>ref|XP_002325195.1| hypothetical protein POPTR_0018s12600g [Populus trichocarpa]
           gi|222866629|gb|EEF03760.1| hypothetical protein
           POPTR_0018s12600g [Populus trichocarpa]
          Length = 501

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 44/115 (38%), Positives = 63/115 (54%), Gaps = 3/115 (2%)
 Frame = +3

Query: 87  APDDDDLPEFDFNAACG--PSNINRVSNASQLDKRLPAIGGKNVGGSVPCTLPSIVQPMI 260
           AP DDDLPEFDF  ACG   +  ++  +    D +LPA   K +  S+P   P+ VQ M+
Sbjct: 249 APYDDDLPEFDFGTACGILQTPTSKPLHGVIADNKLPAEELKKILESLPQITPT-VQSML 307

Query: 261 IANQQRPQSPNFPGLPLDTRQGMPHLSKKLGEGQSIRPV-VPFPKKPVTHSSDLP 422
           ++NQ+  +  N P LPLDT   MP   K   +G ++ P  +   + PVT +S  P
Sbjct: 308 VSNQRELRDFNPPRLPLDTLLKMPVQRKICVDGMNVLPPNLEEKRMPVTTTSARP 362


>ref|XP_007013558.1| SPOC domain / Transcription elongation factor S-II protein,
           putative isoform 2 [Theobroma cacao]
           gi|508783921|gb|EOY31177.1| SPOC domain / Transcription
           elongation factor S-II protein, putative isoform 2
           [Theobroma cacao]
          Length = 426

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 45/137 (32%), Positives = 66/137 (48%), Gaps = 2/137 (1%)
 Frame = +3

Query: 9   KSDNGYDLPRPVIAAQPKIGKTHDGLAPDDDDLPEFDFNAACGPSNI--NRVSNASQLDK 182
           K  +   L  PV++    I K H   A DDDDLPEFDF  AC  S    N+V + ++  K
Sbjct: 156 KPKSSLGLQNPVLSLPSVITKEHIPAA-DDDDLPEFDFGTACDISQTPRNKVLDNAEFHK 214

Query: 183 RLPAIGGKNVGGSVPCTLPSIVQPMIIANQQRPQSPNFPGLPLDTRQGMPHLSKKLGEGQ 362
            +   G K + GS+P T  S +Q +  +N++R ++   P    DT   +P   K     Q
Sbjct: 215 NVLVEGLKKIVGSLPLT--STIQSLPSSNKRRAENFPLPEFSFDTILNLPPRKKVYEHDQ 272

Query: 363 SIRPVVPFPKKPVTHSS 413
           +  PV+P  +   T  S
Sbjct: 273 T--PVLPILEPKQTTKS 287


>ref|XP_007013557.1| SPOC domain / Transcription elongation factor S-II protein,
           putative isoform 1 [Theobroma cacao]
           gi|508783920|gb|EOY31176.1| SPOC domain / Transcription
           elongation factor S-II protein, putative isoform 1
           [Theobroma cacao]
          Length = 573

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 45/137 (32%), Positives = 66/137 (48%), Gaps = 2/137 (1%)
 Frame = +3

Query: 9   KSDNGYDLPRPVIAAQPKIGKTHDGLAPDDDDLPEFDFNAACGPSNI--NRVSNASQLDK 182
           K  +   L  PV++    I K H   A DDDDLPEFDF  AC  S    N+V + ++  K
Sbjct: 303 KPKSSLGLQNPVLSLPSVITKEHIPAA-DDDDLPEFDFGTACDISQTPRNKVLDNAEFHK 361

Query: 183 RLPAIGGKNVGGSVPCTLPSIVQPMIIANQQRPQSPNFPGLPLDTRQGMPHLSKKLGEGQ 362
            +   G K + GS+P T  S +Q +  +N++R ++   P    DT   +P   K     Q
Sbjct: 362 NVLVEGLKKIVGSLPLT--STIQSLPSSNKRRAENFPLPEFSFDTILNLPPRKKVYEHDQ 419

Query: 363 SIRPVVPFPKKPVTHSS 413
           +  PV+P  +   T  S
Sbjct: 420 T--PVLPILEPKQTTKS 434


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