BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia26_contig00032604
         (568 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40014.3| unnamed protein product [Vitis vinifera]               86   5e-15
ref|XP_002273602.1| PREDICTED: RNA polymerase sigma factor rpoD-...    85   1e-14
ref|XP_006484754.1| PREDICTED: RNA polymerase sigma factor sigB-...    82   1e-13
ref|XP_006437338.1| hypothetical protein CICLE_v10030998mg [Citr...    82   1e-13
ref|XP_007029868.1| RNApolymerase sigma subunit 2 [Theobroma cac...    78   1e-12
gb|EXB70625.1| RNA polymerase sigma factor rpoD [Morus notabilis]      68   1e-09
ref|XP_002319746.2| SIGMA FACTOR B family protein [Populus trich...    66   7e-09
ref|XP_002523972.1| RNA polymerase sigma factor rpoD1, putative ...    65   1e-08
ref|XP_002325455.2| hypothetical protein POPTR_0019s06100g [Popu...    59   7e-07
ref|XP_006307126.1| hypothetical protein CARUB_v10008711mg [Caps...    56   6e-06
ref|XP_006307125.1| hypothetical protein CARUB_v10008711mg [Caps...    56   6e-06
ref|XP_006577887.1| PREDICTED: RNA polymerase sigma factor sigB-...    56   7e-06

>emb|CBI40014.3| unnamed protein product [Vitis vinifera]
          Length = 575

 Score = 86.3 bits (212), Expect = 5e-15
 Identities = 48/109 (44%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
 Frame = +3

Query: 174 MACMLPQFKCPPHIHFRSHTHTNLF-KTRQPVCFRVQCIMXXXXXXXXXXXXXXXXXXQL 350
           M+C+LPQFKCPP   F +H   ++  K R+ + FRVQC +                  +L
Sbjct: 1   MSCLLPQFKCPPDT-FSTHPKLHILSKNREAIYFRVQCALSTTSPPLSTSTTAVLDIEKL 59

Query: 351 --PSFEAHLNSVAADKPLTYAGAFGPPSKANLESTLATEALIMREGAVI 491
             PS E+H NSVAA +P TY G  GPP++AN E+TLA E L+  E AVI
Sbjct: 60  RLPSLESHSNSVAAHRPWTYIGVVGPPTEANFEATLARETLLTSEEAVI 108


>ref|XP_002273602.1| PREDICTED: RNA polymerase sigma factor rpoD-like [Vitis vinifera]
          Length = 578

 Score = 85.1 bits (209), Expect = 1e-14
 Identities = 48/112 (42%), Positives = 63/112 (56%), Gaps = 6/112 (5%)
 Frame = +3

Query: 174 MACMLPQFKCPPHIHFRSHTHTNLF----KTRQPVCFRVQCIMXXXXXXXXXXXXXXXXX 341
           M+C+LPQFKCPP   F +H   ++     K R+ + FRVQC +                 
Sbjct: 1   MSCLLPQFKCPPDT-FSTHPKLHILCKSPKNREAIYFRVQCALSTTSPPLSTSTTAVLDI 59

Query: 342 XQL--PSFEAHLNSVAADKPLTYAGAFGPPSKANLESTLATEALIMREGAVI 491
            +L  PS E+H NSVAA +P TY G  GPP++AN E+TLA E L+  E AVI
Sbjct: 60  EKLRLPSLESHSNSVAAHRPWTYIGVVGPPTEANFEATLARETLLTSEEAVI 111


>ref|XP_006484754.1| PREDICTED: RNA polymerase sigma factor sigB-like isoform X1 [Citrus
           sinensis]
          Length = 605

 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 45/118 (38%), Positives = 66/118 (55%), Gaps = 10/118 (8%)
 Frame = +3

Query: 165 SKRMACMLPQFKCPPH---IHFRS-----HTHTNLFKTRQPVCFRVQCIMXXXXXXXXXX 320
           +K M+C+LPQFKC P    IHFR+     H  ++  K+++P+CFR  C++          
Sbjct: 21  NKNMSCLLPQFKCQPDTFSIHFRTLHNHQHHSSHPSKSKEPICFRTHCVLSTTSPSTSTA 80

Query: 321 XXXXXXXXQL--PSFEAHLNSVAADKPLTYAGAFGPPSKANLESTLATEALIMREGAV 488
                   +L  PS EAH N+VAA++  TY GA GP ++ NL ++LATE L   E  +
Sbjct: 81  MTTVLDVEKLRLPSLEAHSNAVAANRQWTYFGAVGPSTEENLGTSLATETLTSDEAVI 138


>ref|XP_006437338.1| hypothetical protein CICLE_v10030998mg [Citrus clementina]
           gi|557539534|gb|ESR50578.1| hypothetical protein
           CICLE_v10030998mg [Citrus clementina]
          Length = 605

 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 45/118 (38%), Positives = 66/118 (55%), Gaps = 10/118 (8%)
 Frame = +3

Query: 165 SKRMACMLPQFKCPPH---IHFRS-----HTHTNLFKTRQPVCFRVQCIMXXXXXXXXXX 320
           +K M+C+LPQFKC P    IHFR+     H  ++  K+++P+CFR  C++          
Sbjct: 21  NKNMSCLLPQFKCQPDTFSIHFRTLHNHQHHSSHPSKSKEPICFRTHCVLSTTSPSTSTA 80

Query: 321 XXXXXXXXQL--PSFEAHLNSVAADKPLTYAGAFGPPSKANLESTLATEALIMREGAV 488
                   +L  PS EAH N+VAA++  TY GA GP ++ NL ++LATE L   E  +
Sbjct: 81  MTTVLDVEKLRLPSLEAHSNAVAANRQWTYFGAVGPSTEENLGTSLATETLTSDEAVI 138


>ref|XP_007029868.1| RNApolymerase sigma subunit 2 [Theobroma cacao]
           gi|508718473|gb|EOY10370.1| RNApolymerase sigma subunit
           2 [Theobroma cacao]
          Length = 623

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 52/147 (35%), Positives = 70/147 (47%), Gaps = 41/147 (27%)
 Frame = +3

Query: 174 MACMLPQFKCPPH---IHFRSHTHTNLF-------------------------------- 248
           M+C+LPQFKC P    I FR+H H++ F                                
Sbjct: 1   MSCLLPQFKCQPDTFSIQFRTH-HSHHFLIAVTGMVKYFSPRQCSCGNLTNPPKVSGLIF 59

Query: 249 ----KTRQPVCFRVQCIMXXXXXXXXXXXXXXXXXXQL--PSFEAHLNSVAADKPLTYAG 410
               K ++ +CFR QC++                  +L  PSFEAH NSVA D+P TY G
Sbjct: 60  VVLAKHKEHICFRTQCVLSTTSSSTSTTATAVLDVEKLRLPSFEAHPNSVAVDRPWTYIG 119

Query: 411 AFGPPSKANLESTLATEALIMREGAVI 491
           A GPPS+A+L +TLAT+ L+  + AVI
Sbjct: 120 ATGPPSEASLGATLATDNLLTSDEAVI 146


>gb|EXB70625.1| RNA polymerase sigma factor rpoD [Morus notabilis]
          Length = 574

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 43/117 (36%), Positives = 63/117 (53%), Gaps = 11/117 (9%)
 Frame = +3

Query: 174 MACMLPQFKCPP-----HIHFRSHT----HTNLFKTRQPVCFRVQCIMXXXXXXXXXXXX 326
           M+C+LPQF C P       +FR+H+    +++L K R  +    QC++            
Sbjct: 1   MSCLLPQFNCKPDTFSAQFNFRTHSLPTPNSHLPKARD-INSLAQCVLSTTSPSTSVGAT 59

Query: 327 XXXXXXQL--PSFEAHLNSVAADKPLTYAGAFGPPSKANLESTLATEALIMREGAVI 491
                 +L  PS +A+  SV +++P TY GA GPP +AN E+TLATE L+  E AVI
Sbjct: 60  YVLSVEKLRFPSLDANSESVTSNRPWTYTGATGPPVEANFEATLATETLLTSEEAVI 116


>ref|XP_002319746.2| SIGMA FACTOR B family protein [Populus trichocarpa]
           gi|550325142|gb|EEE95669.2| SIGMA FACTOR B family
           protein [Populus trichocarpa]
          Length = 567

 Score = 65.9 bits (159), Expect = 7e-09
 Identities = 39/109 (35%), Positives = 55/109 (50%), Gaps = 3/109 (2%)
 Frame = +3

Query: 174 MACMLPQFKCPPH---IHFRSHTHTNLFKTRQPVCFRVQCIMXXXXXXXXXXXXXXXXXX 344
           M+C+LPQFKC P    +HFR+  H     T+ P     QC++                  
Sbjct: 1   MSCLLPQFKCQPDTFSVHFRNLQHHGTNHTQLP-----QCVLSSASPSTAVLDLEKL--- 52

Query: 345 QLPSFEAHLNSVAADKPLTYAGAFGPPSKANLESTLATEALIMREGAVI 491
           +LPS E H +S++A++P TY G  GP  K    ++LA E LI  + AVI
Sbjct: 53  RLPSLEPHSDSISANRPWTYIGGIGPQKKPPFGTSLAAETLIANDEAVI 101


>ref|XP_002523972.1| RNA polymerase sigma factor rpoD1, putative [Ricinus communis]
           gi|223536699|gb|EEF38340.1| RNA polymerase sigma factor
           rpoD1, putative [Ricinus communis]
          Length = 569

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 46/114 (40%), Positives = 60/114 (52%), Gaps = 8/114 (7%)
 Frame = +3

Query: 174 MACMLPQFKCPPH---IHFRSHTH-----TNLFKTRQPVCFRVQCIMXXXXXXXXXXXXX 329
           M+C+LPQFKC P    IHFR++       T   K+R+P+ +R QCI+             
Sbjct: 2   MSCLLPQFKCQPDTFSIHFRANYFHFSNVTQSTKSREPIYYRAQCILSTTSPSTSTAVLD 61

Query: 330 XXXXXQLPSFEAHLNSVAADKPLTYAGAFGPPSKANLESTLATEALIMREGAVI 491
                +LPSFEA  +S+A + P TYA  FG        STLATE LI  + AVI
Sbjct: 62  LEKL-RLPSFEAPSDSIAPNSPWTYA-TFG--------STLATETLITSDEAVI 105


>ref|XP_002325455.2| hypothetical protein POPTR_0019s06100g [Populus trichocarpa]
           gi|550316911|gb|EEE99836.2| hypothetical protein
           POPTR_0019s06100g [Populus trichocarpa]
          Length = 555

 Score = 59.3 bits (142), Expect = 7e-07
 Identities = 31/81 (38%), Positives = 44/81 (54%)
 Frame = +3

Query: 249 KTRQPVCFRVQCIMXXXXXXXXXXXXXXXXXXQLPSFEAHLNSVAADKPLTYAGAFGPPS 428
           K  +P CFR QC +                  +LPS E+H +S+AA++P TY G  GPP 
Sbjct: 10  KNGEPFCFRAQCALSSASPSTSTAVLNLEKL-RLPSLESHSDSIAANRPWTYIGGIGPPK 68

Query: 429 KANLESTLATEALIMREGAVI 491
           +    ++LATE LI+ + AVI
Sbjct: 69  EPLFGTSLATETLIINDEAVI 89


>ref|XP_006307126.1| hypothetical protein CARUB_v10008711mg [Capsella rubella]
           gi|482575837|gb|EOA40024.1| hypothetical protein
           CARUB_v10008711mg [Capsella rubella]
          Length = 571

 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 3/108 (2%)
 Frame = +3

Query: 177 ACMLPQFKCPPH---IHFRSHTHTNLFKTRQPVCFRVQCIMXXXXXXXXXXXXXXXXXXQ 347
           +C+LPQFKC P    IHFR+    +  + + PV F+ QC +                  +
Sbjct: 3   SCLLPQFKCQPDSFSIHFRTSFSVSK-QNKGPVFFQPQCAVTTSPALLTSTLDVAKL--R 59

Query: 348 LPSFEAHLNSVAADKPLTYAGAFGPPSKANLESTLATEALIMREGAVI 491
           LPSF+   +S  +D+  TY G  GP ++A     LA+E L+  + AV+
Sbjct: 60  LPSFDTDSDSRISDRQWTYTGTVGPSTEAKYLEALASETLLTSDEAVV 107


>ref|XP_006307125.1| hypothetical protein CARUB_v10008711mg [Capsella rubella]
           gi|482575836|gb|EOA40023.1| hypothetical protein
           CARUB_v10008711mg [Capsella rubella]
          Length = 487

 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 3/108 (2%)
 Frame = +3

Query: 177 ACMLPQFKCPPH---IHFRSHTHTNLFKTRQPVCFRVQCIMXXXXXXXXXXXXXXXXXXQ 347
           +C+LPQFKC P    IHFR+    +  + + PV F+ QC +                  +
Sbjct: 3   SCLLPQFKCQPDSFSIHFRTSFSVSK-QNKGPVFFQPQCAVTTSPALLTSTLDVAKL--R 59

Query: 348 LPSFEAHLNSVAADKPLTYAGAFGPPSKANLESTLATEALIMREGAVI 491
           LPSF+   +S  +D+  TY G  GP ++A     LA+E L+  + AV+
Sbjct: 60  LPSFDTDSDSRISDRQWTYTGTVGPSTEAKYLEALASETLLTSDEAVV 107


>ref|XP_006577887.1| PREDICTED: RNA polymerase sigma factor sigB-like [Glycine max]
          Length = 564

 Score = 55.8 bits (133), Expect = 7e-06
 Identities = 41/113 (36%), Positives = 56/113 (49%), Gaps = 7/113 (6%)
 Frame = +3

Query: 174 MACMLPQFKCPPHIH-FRSHTH---TNLFKTRQPVCFRVQCIMXXXXXXXXXXXXXXXXX 341
           M+C+LP F C  H+  FR+H +   T+L KTR  +CF+ QC++                 
Sbjct: 1   MSCLLPHFNC--HLDTFRTHPYALPTHLSKTRPNLCFQPQCVLSATSPST---------- 48

Query: 342 XQLPSFEAHLNSVAADKPLT---YAGAFGPPSKANLESTLATEALIMREGAVI 491
             L S E  L   A   P T   Y  A  PP +AN +STL+ E+L+  E AVI
Sbjct: 49  --LLSLEKKLALDAPSDPNTSWPYIAAVSPPLQANFKSTLSAESLLTNEEAVI 99