BLASTX nr result

ID: Akebia26_contig00032309 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia26_contig00032309
         (345 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26162.3| unnamed protein product [Vitis vinifera]               62   1e-07
ref|XP_003530332.1| PREDICTED: pentatricopeptide repeat-containi...    57   3e-06

>emb|CBI26162.3| unnamed protein product [Vitis vinifera]
          Length = 636

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 36/75 (48%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
 Frame = +2

Query: 104 IQHIIKHPNNALIS---FNRLCSLQGFSPDSAFFNALFDILFKVKASKVAHSFLKSTHFV 274
           + H ++H  NALIS   F+ L S  GFSPDS+  N LFD L +  A   A SFL ST+F 
Sbjct: 130 LSHFVEHQKNALISLRFFHWLSSQSGFSPDSSSCNVLFDALVEAGACNAAKSFLDSTNFN 189

Query: 275 LEPNYLESLI*CLRK 319
            +P  LE+ I CL K
Sbjct: 190 PKPASLEAYIRCLCK 204


>ref|XP_003530332.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g18950-like isoform X1 [Glycine max]
           gi|571466579|ref|XP_006583703.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g18950-like isoform X2 [Glycine max]
          Length = 577

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 33/69 (47%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
 Frame = +2

Query: 116 IKHPNNALIS---FNRLCSLQGFSPDSAFFNALFDILFKVKASKVAHSFLKSTHFVLEPN 286
           +KH NNA +S   F+ LCS  GFSPD +  N LF +L    A K+A S L S  F  EP 
Sbjct: 87  LKHQNNAFLSLRFFHWLCSSCGFSPDQSSCNVLFQVLVDAGAGKLAKSLLDSPGFTPEPA 146

Query: 287 YLESLI*CL 313
            LE  I CL
Sbjct: 147 SLEGYIQCL 155


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