BLASTX nr result
ID: Akebia26_contig00032079
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia26_contig00032079
(1033 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containi... 244 4e-62
ref|XP_006853118.1| hypothetical protein AMTR_s00038p00140720 [A... 233 1e-58
gb|EXB57399.1| hypothetical protein L484_016452 [Morus notabilis] 231 3e-58
emb|CBI21003.3| unnamed protein product [Vitis vinifera] 231 3e-58
ref|XP_006853110.1| hypothetical protein AMTR_s00038p00132760 [A... 224 6e-56
ref|XP_007206864.1| hypothetical protein PRUPE_ppa1027201mg, par... 218 3e-54
ref|XP_002309609.2| pentatricopeptide repeat-containing family p... 212 2e-52
ref|XP_004514126.1| PREDICTED: pentatricopeptide repeat-containi... 205 2e-50
ref|XP_006450492.1| hypothetical protein CICLE_v10010816mg [Citr... 202 2e-49
ref|XP_007013815.1| Pentatricopeptide repeat superfamily protein... 201 5e-49
ref|XP_002515553.1| pentatricopeptide repeat-containing protein,... 200 9e-49
ref|XP_007136983.1| hypothetical protein PHAVU_009G090400g [Phas... 196 1e-47
gb|EYU21955.1| hypothetical protein MIMGU_mgv1a001349mg [Mimulus... 195 3e-47
ref|XP_003607325.1| Pentatricopeptide repeat-containing protein ... 189 2e-45
ref|XP_004245400.1| PREDICTED: pentatricopeptide repeat-containi... 162 2e-37
ref|NP_181456.1| pentatricopeptide repeat protein LOJ [Arabidops... 161 5e-37
ref|XP_002879788.1| pentatricopeptide repeat-containing protein ... 159 2e-36
ref|XP_004301621.1| PREDICTED: pentatricopeptide repeat-containi... 158 4e-36
ref|XP_006364273.1| PREDICTED: pentatricopeptide repeat-containi... 156 2e-35
ref|XP_006293664.1| hypothetical protein CARUB_v10022620mg [Caps... 147 9e-33
>ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Vitis vinifera]
Length = 877
Score = 244 bits (623), Expect = 4e-62
Identities = 150/341 (43%), Positives = 200/341 (58%), Gaps = 3/341 (0%)
Frame = -1
Query: 1015 MRIYVASSSHSPWLLRSYRKSFCSASTLNSQDPVLKEKPISESGISETSDSKTGFFDKSI 836
MR ++ S+ SP L + C S S P + E I E SE
Sbjct: 1 MRSAISLSTFSPILRWPFTNPKCVCSV--SIPPAISEPEILEKSTSE------------- 45
Query: 835 SETTFPVKPSSKIGFLEEPNLEIRVSDKLTSEGTRNAFTQFQQEISSQDTDTVLNQDRVI 656
S T FP P+ K F E+ + E +S R + Q+T T L+Q+ VI
Sbjct: 46 SLTHFPEDPNPKANFPEKISPESSFPGNSSSPYPRYSQDTVPTSQIHQET-TPLSQNHVI 104
Query: 655 EFLLNNQHDPVLVLKYFKWAEKQRGFVRGVDALCITLHILVNSRNVWD-ARKLLNQCLSG 479
+ LL + +DP L+YFK AE QRGF+RGVDA C+ LHIL+ S ARKLLN+ +SG
Sbjct: 105 DALLCHVNDPQSALRYFKRAETQRGFIRGVDAYCVLLHILMRSPETHGHARKLLNRYVSG 164
Query: 478 DSSPCATILVDRLMETSKRCG--LNPLLFSYVLNSYVRAGRIEDAAECFDRMIKYDIVPG 305
DS P + VD L+ +KR L+ +F+Y+LN+Y+RA RIE+A +CF+ MI D++P
Sbjct: 165 DSDPSPVVFVDHLINCAKRFDFELDHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPW 224
Query: 304 ISYRNILLNALVRANMIGKARDLYKGMLERGVGCDCFTLDIMMHACLKEGKPEEAEKYFR 125
+ Y NILL ALVR NMIG+ RDLY M+ RG+ D FT+ +M+ ACLKEG+ EEAE+YFR
Sbjct: 225 VPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFR 284
Query: 124 EMKTRVFEFDPVTYNTVILAVCKKPDSKTALELLKEMKNMG 2
E K R + D Y+ +I AVCKKP+S LELL+EMK G
Sbjct: 285 ETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERG 325
Score = 73.2 bits (178), Expect = 2e-10
Identities = 52/193 (26%), Positives = 86/193 (44%), Gaps = 4/193 (2%)
Frame = -1
Query: 568 VDALCITLHILVNSRNVWDARK----LLNQCLSGDSSPCATILVDRLMETSKRCGLNPLL 401
+D C L +VN V + +L C G+ +++ D L K N +
Sbjct: 485 MDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKP---NVVT 541
Query: 400 FSYVLNSYVRAGRIEDAAECFDRMIKYDIVPGISYRNILLNALVRANMIGKARDLYKGML 221
+S +++ + G E A + FD+M+ +I P N ++N L + + +ARD K L
Sbjct: 542 YSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFL 601
Query: 220 ERGVGCDCFTLDIMMHACLKEGKPEEAEKYFREMKTRVFEFDPVTYNTVILAVCKKPDSK 41
E G C T + ++ +KEG + A +REM + VTY ++I CK
Sbjct: 602 EEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRID 661
Query: 40 TALELLKEMKNMG 2
AL+ EM+ G
Sbjct: 662 LALKTRDEMREKG 674
>ref|XP_006853118.1| hypothetical protein AMTR_s00038p00140720 [Amborella trichopoda]
gi|548856757|gb|ERN14585.1| hypothetical protein
AMTR_s00038p00140720 [Amborella trichopoda]
Length = 855
Score = 233 bits (594), Expect = 1e-58
Identities = 115/240 (47%), Positives = 162/240 (67%)
Frame = -1
Query: 721 TQFQQEISSQDTDTVLNQDRVIEFLLNNQHDPVLVLKYFKWAEKQRGFVRGVDALCITLH 542
+Q ++IS ++TVL Q+ V+E LL+NQ D L+YF+WAE+QRGF+RG++ LC+ LH
Sbjct: 71 SQIDRQISLSHSNTVLTQEHVVEVLLSNQTDSKAALRYFRWAERQRGFIRGLEPLCVVLH 130
Query: 541 ILVNSRNVWDARKLLNQCLSGDSSPCATILVDRLMETSKRCGLNPLLFSYVLNSYVRAGR 362
IL ++++ AR L+ LS +SS A+ +DRL+ETS+RC +P +F VLN Y R G
Sbjct: 131 ILARNKDLPAARNLIKHSLSANSSIGASAFIDRLLETSERCNSHPRVFDLVLNGYTRYGS 190
Query: 361 IEDAAECFDRMIKYDIVPGISYRNILLNALVRANMIGKARDLYKGMLERGVGCDCFTLDI 182
+ ++ E + R++ + P + N+LLN LVR N I +A DLY+ M+ERGV DC TLD
Sbjct: 191 VTESLETYHRLVSNGVFPSVGCINLLLNKLVRLNFIDEAWDLYREMVERGVDLDCQTLDA 250
Query: 181 MMHACLKEGKPEEAEKYFREMKTRVFEFDPVTYNTVILAVCKKPDSKTALELLKEMKNMG 2
M+HAC K GK EEAE F+EM+ R + D V+Y +I A+CKK SK A ELL EMK +G
Sbjct: 251 MVHACSKGGKLEEAEGLFQEMRIRGCKLDSVSYTNIIQALCKKTCSKKACELLTEMKKLG 310
Score = 68.6 bits (166), Expect = 4e-09
Identities = 42/154 (27%), Positives = 74/154 (48%), Gaps = 2/154 (1%)
Frame = -1
Query: 457 ILVDRLMETSKRCGLNPLLFSY--VLNSYVRAGRIEDAAECFDRMIKYDIVPGISYRNIL 284
+L ++ + GL L +Y +++ + + G + +A E F+ M + + P S N L
Sbjct: 642 VLALKVRNVMRSRGLQSDLVTYNALIDGFCKRGDMYNAIEIFNEMCEVGLAPNASIYNTL 701
Query: 283 LNALVRANMIGKARDLYKGMLERGVGCDCFTLDIMMHACLKEGKPEEAEKYFREMKTRVF 104
+ + A L+KGM E GV CD T ++ LKEG A + ++EM ++
Sbjct: 702 MGGYRNECNMEAALKLHKGMKEEGVPCDLATYTTLIDGLLKEGNVILALELYKEMLSQYI 761
Query: 103 EFDPVTYNTVILAVCKKPDSKTALELLKEMKNMG 2
D +TY +I +C + + + A + L EM G
Sbjct: 762 MPDAITYTVLIRGLCSRGEMENARQFLDEMGRKG 795
>gb|EXB57399.1| hypothetical protein L484_016452 [Morus notabilis]
Length = 907
Score = 231 bits (590), Expect = 3e-58
Identities = 140/342 (40%), Positives = 199/342 (58%), Gaps = 5/342 (1%)
Frame = -1
Query: 1015 MRIYVASSSHSPWLLRSYR--KSFCSASTLNSQDPVLKEKPISESGISETSDSKTGFFDK 842
MR + SS SP L RS+ + C T+ + V+ E P+SE+ + T D+
Sbjct: 1 MRSSITSSPISPLLRRSFLHPRYLCHEFTIPDKS-VISESPVSENASPSLA---TKSLDE 56
Query: 841 SISETTFPVKPSSKIGFLEEPNLEIRVSDKLTSEGTRNAFTQFQQEISSQDTDTVLNQDR 662
SE+ KP+S++ +PN + + S TD L Q
Sbjct: 57 FTSESNSAEKPTSEV----DPN----------------------RNLCSLSTD--LTQAH 88
Query: 661 VIEFLLNNQHDPVLVLKYFKWAEKQRGFVRGVDALCITLHILVNSRNVW-DARKLLNQCL 485
VI LL++++DP LKYFKWAE+ RGF+RGVD+ + LHIL+ S+ A+ LL+ +
Sbjct: 89 VINTLLSHKNDPYSALKYFKWAERMRGFIRGVDSFSVLLHILMGSQETHGSAQSLLSLYV 148
Query: 484 SGDSSPCATILVDRLMETSKRCGLNP--LLFSYVLNSYVRAGRIEDAAECFDRMIKYDIV 311
SGDS P A + VD L + +KR P +F+Y+LNSY+RA RI DA CF++M+++DI+
Sbjct: 149 SGDSGPSANVFVDHLFDCAKRFEFEPDSRIFNYLLNSYIRANRIRDAVHCFNKMVEHDIL 208
Query: 310 PGISYRNILLNALVRANMIGKARDLYKGMLERGVGCDCFTLDIMMHACLKEGKPEEAEKY 131
P + + NILL AL+R NM +A DL+ M+ RGV D T+ ++M ACLK+ + EEAEKY
Sbjct: 209 PWVPFMNILLTALIRRNMSREALDLHHKMVLRGVFGDRVTVPVLMRACLKKEREEEAEKY 268
Query: 130 FREMKTRVFEFDPVTYNTVILAVCKKPDSKTALELLKEMKNM 5
FRE R E D Y+ +I A CKKP+ K A ELLKEM++M
Sbjct: 269 FREATVRGIELDAAAYSFLIQAFCKKPNCKVASELLKEMRDM 310
Score = 75.5 bits (184), Expect = 3e-11
Identities = 43/149 (28%), Positives = 73/149 (48%), Gaps = 1/149 (0%)
Frame = -1
Query: 445 RLMETSKRCGL-NPLLFSYVLNSYVRAGRIEDAAECFDRMIKYDIVPGISYRNILLNALV 269
+L + CG+ N L++ +LNS G++ +A +D MI D+VP + + ++
Sbjct: 442 KLFNEAVECGVANTFLYNTLLNSLCNEGKVNEACALWDNMISKDVVPNVVSYSSMILCHC 501
Query: 268 RANMIGKARDLYKGMLERGVGCDCFTLDIMMHACLKEGKPEEAEKYFREMKTRVFEFDPV 89
R + A +L+ MLER V D FT I++ C K+G + A + +M
Sbjct: 502 RKGALDMAHNLFTEMLERSVKPDVFTYSILIDGCFKKGDVKRAFNVYEQMMAVNIAPTDY 561
Query: 88 TYNTVILAVCKKPDSKTALELLKEMKNMG 2
TYNT+I +C+ + A + LK+ G
Sbjct: 562 TYNTIINGLCRVGRASEARDELKKYVKKG 590
Score = 58.9 bits (141), Expect = 3e-06
Identities = 35/133 (26%), Positives = 58/133 (43%)
Frame = -1
Query: 400 FSYVLNSYVRAGRIEDAAECFDRMIKYDIVPGISYRNILLNALVRANMIGKARDLYKGML 221
++ ++N R GR +A + + +K +P N ++N + A ++Y+ M
Sbjct: 563 YNTIINGLCRVGRASEARDELKKYVKKGFIPVCLTYNSIINGFTKKGDTNSALEVYREMC 622
Query: 220 ERGVGCDCFTLDIMMHACLKEGKPEEAEKYFREMKTRVFEFDPVTYNTVILAVCKKPDSK 41
E GV + T ++ LK A K EMK + + D Y +I CK D
Sbjct: 623 EGGVSPNVVTYTSLIEGFLKSKNMALALKMRNEMKDKGIKLDVTAYGALIDGFCKGRDIV 682
Query: 40 TALELLKEMKNMG 2
TA EL E+ +G
Sbjct: 683 TAYELFSELLEVG 695
>emb|CBI21003.3| unnamed protein product [Vitis vinifera]
Length = 837
Score = 231 bits (590), Expect = 3e-58
Identities = 122/230 (53%), Positives = 161/230 (70%), Gaps = 3/230 (1%)
Frame = -1
Query: 682 TVLNQDRVIEFLLNNQHDPVLVLKYFKWAEKQRGFVRGVDALCITLHILVNSRNVWD-AR 506
T L+Q+ VI+ LL + +DP L+YFK AE QRGF+RGVDA C+ LHIL+ S AR
Sbjct: 56 TPLSQNHVIDALLCHVNDPQSALRYFKRAETQRGFIRGVDAYCVLLHILMRSPETHGHAR 115
Query: 505 KLLNQCLSGDSSPCATILVDRLMETSKRCG--LNPLLFSYVLNSYVRAGRIEDAAECFDR 332
KLLN+ +SGDS P + VD L+ +KR L+ +F+Y+LN+Y+RA RIE+A +CF+
Sbjct: 116 KLLNRYVSGDSDPSPVVFVDHLINCAKRFDFELDHRVFNYLLNAYIRANRIENAIDCFNA 175
Query: 331 MIKYDIVPGISYRNILLNALVRANMIGKARDLYKGMLERGVGCDCFTLDIMMHACLKEGK 152
MI D++P + Y NILL ALVR NMIG+ RDLY M+ RG+ D FT+ +M+ ACLKEG+
Sbjct: 176 MICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGR 235
Query: 151 PEEAEKYFREMKTRVFEFDPVTYNTVILAVCKKPDSKTALELLKEMKNMG 2
EEAE+YFRE K R + D Y+ +I AVCKKP+S LELL+EMK G
Sbjct: 236 VEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERG 285
Score = 73.2 bits (178), Expect = 2e-10
Identities = 52/193 (26%), Positives = 86/193 (44%), Gaps = 4/193 (2%)
Frame = -1
Query: 568 VDALCITLHILVNSRNVWDARK----LLNQCLSGDSSPCATILVDRLMETSKRCGLNPLL 401
+D C L +VN V + +L C G+ +++ D L K N +
Sbjct: 445 MDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKP---NVVT 501
Query: 400 FSYVLNSYVRAGRIEDAAECFDRMIKYDIVPGISYRNILLNALVRANMIGKARDLYKGML 221
+S +++ + G E A + FD+M+ +I P N ++N L + + +ARD K L
Sbjct: 502 YSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFL 561
Query: 220 ERGVGCDCFTLDIMMHACLKEGKPEEAEKYFREMKTRVFEFDPVTYNTVILAVCKKPDSK 41
E G C T + ++ +KEG + A +REM + VTY ++I CK
Sbjct: 562 EEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRID 621
Query: 40 TALELLKEMKNMG 2
AL+ EM+ G
Sbjct: 622 LALKTRDEMREKG 634
>ref|XP_006853110.1| hypothetical protein AMTR_s00038p00132760 [Amborella trichopoda]
gi|548856749|gb|ERN14577.1| hypothetical protein
AMTR_s00038p00132760 [Amborella trichopoda]
Length = 757
Score = 224 bits (570), Expect = 6e-56
Identities = 119/273 (43%), Positives = 166/273 (60%)
Frame = -1
Query: 820 PVKPSSKIGFLEEPNLEIRVSDKLTSEGTRNAFTQFQQEISSQDTDTVLNQDRVIEFLLN 641
P+ P + PN +I L+ T +Q +EI TVL Q+ V+E LLN
Sbjct: 50 PLPPETTPERTPLPNAQIDEDISLSHSKT----SQIDREILFSPAKTVLTQEHVVEVLLN 105
Query: 640 NQHDPVLVLKYFKWAEKQRGFVRGVDALCITLHILVNSRNVWDARKLLNQCLSGDSSPCA 461
NQ P LKYF+WA+ QRG++RG++ LCITLHIL ++N+ RKL+ S S P A
Sbjct: 106 NQSHPKASLKYFRWADAQRGYLRGLEPLCITLHILARNKNLPSVRKLIKFFFSKKSIPGA 165
Query: 460 TILVDRLMETSKRCGLNPLLFSYVLNSYVRAGRIEDAAECFDRMIKYDIVPGISYRNILL 281
+D LMETSKRC +P +F VLN Y R G + ++ E + R++ + P I N+ L
Sbjct: 166 PAFIDCLMETSKRCESHPQVFDLVLNGYTRHGSVPESVEAYKRLVSNGVFPSIECINLHL 225
Query: 280 NALVRANMIGKARDLYKGMLERGVGCDCFTLDIMMHACLKEGKPEEAEKYFREMKTRVFE 101
LVR + + +A +LY+ M++RG D L M+HAC K GKPEEAE +FREMK + +
Sbjct: 226 RKLVRLDFVDEAWNLYREMVDRGADLDSEILVTMVHACSKGGKPEEAEDFFREMKAKGCK 285
Query: 100 FDPVTYNTVILAVCKKPDSKTALELLKEMKNMG 2
D V Y +VI A+CKKP+S+ A ELL+EMK++G
Sbjct: 286 LDAVIYTSVIQALCKKPNSRKACELLREMKSLG 318
Score = 64.3 bits (155), Expect = 8e-08
Identities = 41/146 (28%), Positives = 73/146 (50%), Gaps = 1/146 (0%)
Frame = -1
Query: 436 ETSKRCGLNPLLFSYVLNSYVRAGRIEDAAECFDRMIKYDIVPGISYRNILLNALVRANM 257
E R N + ++ V++ + GR+ +A + +M+ I P + N LL+ L R
Sbjct: 448 EVVDRREANVVTYATVIHWLCKEGRVREACGLWGKMVSSGIKPDVVSVNSLLHGLCRVGN 507
Query: 256 IGKARDLYKGML-ERGVGCDCFTLDIMMHACLKEGKPEEAEKYFREMKTRVFEFDPVTYN 80
I AR LY+ M E G+ D T + ++ C+++ + A K +M++R D V YN
Sbjct: 508 IDLARSLYEQMTQEEGIIPDDITYNTLIIGCIEKDSFDLAMKLLDDMRSRGLRVDIVPYN 567
Query: 79 TVILAVCKKPDSKTALELLKEMKNMG 2
+I +CK+ A++L E+ +G
Sbjct: 568 RLIYRLCKRGYIDVAVKLFDELFEIG 593
>ref|XP_007206864.1| hypothetical protein PRUPE_ppa1027201mg, partial [Prunus persica]
gi|462402506|gb|EMJ08063.1| hypothetical protein
PRUPE_ppa1027201mg, partial [Prunus persica]
Length = 782
Score = 218 bits (555), Expect = 3e-54
Identities = 116/228 (50%), Positives = 154/228 (67%), Gaps = 3/228 (1%)
Frame = -1
Query: 676 LNQDRVIEFLLNNQHDPVLVLKYFKWAEKQRGFVRGVDALCITLHILVNSRNVW-DARKL 500
L Q +VI LL+++ +P LK+F WAEK+RGF++GVDA C+ LHIL A+ L
Sbjct: 3 LTQTKVISTLLSHRSEPNSALKHFIWAEKERGFLKGVDAFCVLLHILTGFEETHVRAQIL 62
Query: 499 LNQCLSGDSSPCATILVDRLMETSKRCG--LNPLLFSYVLNSYVRAGRIEDAAECFDRMI 326
LNQ SGDS P + DRL++ +KR L +FSY+LNSYVRA RI+ A +CFDRMI
Sbjct: 63 LNQYASGDSGPSQQVFFDRLVDCAKRFDFELESRVFSYLLNSYVRANRIKYAIDCFDRMI 122
Query: 325 KYDIVPGISYRNILLNALVRANMIGKARDLYKGMLERGVGCDCFTLDIMMHACLKEGKPE 146
+ ++ P ++ NILL LVR MI AR+LY M+ RG+G D TL +MMHACLKEG+P
Sbjct: 123 ELELYPCVTCMNILLVELVRRKMIVNARELYDKMVLRGMGGDRATLRVMMHACLKEGQPN 182
Query: 145 EAEKYFREMKTRVFEFDPVTYNTVILAVCKKPDSKTALELLKEMKNMG 2
+AE+YFR+ + R E D ++ I AVC KP+ + ALELLKEM+ MG
Sbjct: 183 KAEEYFRQARARGIELDAASHGVAIQAVCSKPNLRLALELLKEMREMG 230
Score = 67.0 bits (162), Expect = 1e-08
Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 2/141 (1%)
Frame = -1
Query: 418 GLNPLLFSY--VLNSYVRAGRIEDAAECFDRMIKYDIVPGISYRNILLNALVRANMIGKA 245
GL P +F+Y ++ Y R G I+ A + F+ M+ I P NI+++ L +A +A
Sbjct: 439 GLKPNVFTYSILIKGYFRKGDIKRALDVFNDMVAAKITPTEFTVNIVIDGLCKAGCTSEA 498
Query: 244 RDLYKGMLERGVGCDCFTLDIMMHACLKEGKPEEAEKYFREMKTRVFEFDPVTYNTVILA 65
D ++ERG C + + ++ +KEG A +REM+ + VTY + +
Sbjct: 499 SDRLNKIVERGFVPGCMSYNNIIDGFIKEGAMNSALAVYREMREGGVSPNVVTYTSFVNG 558
Query: 64 VCKKPDSKTALELLKEMKNMG 2
CK AL++ +MK G
Sbjct: 559 FCKSNQIDLALQMWNDMKKKG 579
>ref|XP_002309609.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550337148|gb|EEE93132.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 841
Score = 212 bits (540), Expect = 2e-52
Identities = 112/243 (46%), Positives = 158/243 (65%), Gaps = 3/243 (1%)
Frame = -1
Query: 721 TQFQQEISSQDTDTVLNQDRVIEFLLNNQHDPVLVLKYFKWAEKQRGFVRGVDALCITLH 542
T F + + D+ L Q + I+ LLN+Q+DP L YF WA ++RG ++ VDALC+ LH
Sbjct: 47 TNFPGKSAPTSQDSFLTQTQYIDTLLNHQNDPQSALSYFTWASQKRGLIKSVDALCVLLH 106
Query: 541 ILVNSRNVWD-ARKLLNQCLSGDSSPCATILVDRLMETSKRCGL--NPLLFSYVLNSYVR 371
IL S AR LLN+ S D P +++V RL+E+S+R + +F+Y+LNSYV+
Sbjct: 107 ILTKSTETCGKARNLLNRFASDDWGPVPSVVVSRLIESSRRLDFESDSRVFNYLLNSYVK 166
Query: 370 AGRIEDAAECFDRMIKYDIVPGISYRNILLNALVRANMIGKARDLYKGMLERGVGCDCFT 191
RI DA +CF+ +I+ DIVP ++ NI L+ LV+ NMI +ARD+Y M +GV DC T
Sbjct: 167 TKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELVKNNMIREARDVYNKMASKGVKGDCAT 226
Query: 190 LDIMMHACLKEGKPEEAEKYFREMKTRVFEFDPVTYNTVILAVCKKPDSKTALELLKEMK 11
+ +M+ A ++EGK EEAE +FRE K + E D Y+ VI AVCKKPDS AL LL+EM+
Sbjct: 227 ISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKKPDSVAALGLLREMR 286
Query: 10 NMG 2
+ G
Sbjct: 287 DKG 289
Score = 72.0 bits (175), Expect = 4e-10
Identities = 48/169 (28%), Positives = 79/169 (46%), Gaps = 2/169 (1%)
Frame = -1
Query: 502 LLNQCLSGDSSPCATILVDRLMETSKRCGLNPLLFSY--VLNSYVRAGRIEDAAECFDRM 329
+L C GD + V+ L + GL P L +Y +++ Y + G E A +DRM
Sbjct: 475 ILGHCQQGDMDSANGVFVEMLEK-----GLKPNLITYSVLMDGYFKKGDTEYAFGLYDRM 529
Query: 328 IKYDIVPGISYRNILLNALVRANMIGKARDLYKGMLERGVGCDCFTLDIMMHACLKEGKP 149
+I P NI++N L +A +++D K +++ G C T + ++ +KEG
Sbjct: 530 RGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSV 589
Query: 148 EEAEKYFREMKTRVFEFDPVTYNTVILAVCKKPDSKTALELLKEMKNMG 2
A + EM + TY +I CK + AL+++ EMKN G
Sbjct: 590 NSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKG 638
Score = 60.8 bits (146), Expect = 9e-07
Identities = 32/130 (24%), Positives = 62/130 (47%)
Frame = -1
Query: 391 VLNSYVRAGRIEDAAECFDRMIKYDIVPGISYRNILLNALVRANMIGKARDLYKGMLERG 212
++N +AGR ++ + ++++ +P N +++ V+ + A +Y M + G
Sbjct: 544 IINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIG 603
Query: 211 VGCDCFTLDIMMHACLKEGKPEEAEKYFREMKTRVFEFDPVTYNTVILAVCKKPDSKTAL 32
V + FT +++ K + A K EMK + E D Y +I C+K D A
Sbjct: 604 VSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNAS 663
Query: 31 ELLKEMKNMG 2
+LL E++ +G
Sbjct: 664 QLLSELQEVG 673
Score = 58.9 bits (141), Expect = 3e-06
Identities = 40/165 (24%), Positives = 76/165 (46%), Gaps = 2/165 (1%)
Frame = -1
Query: 490 CLSGDSSPCATILVDRLMETSKRCGLNP--LLFSYVLNSYVRAGRIEDAAECFDRMIKYD 317
C GD + +L+ + GL+P +++S +++ + + +E A RMI
Sbjct: 654 CRKGDM-----VNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEG 708
Query: 316 IVPGISYRNILLNALVRANMIGKARDLYKGMLERGVGCDCFTLDIMMHACLKEGKPEEAE 137
I + L++ L++ + A +LY ML +G+ D T +++H +G+ E A+
Sbjct: 709 IPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQ 768
Query: 136 KYFREMKTRVFEFDPVTYNTVILAVCKKPDSKTALELLKEMKNMG 2
K +M + YNT+I K+ + + A L EM + G
Sbjct: 769 KILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKG 813
>ref|XP_004514126.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cicer arietinum]
Length = 850
Score = 205 bits (522), Expect = 2e-50
Identities = 106/227 (46%), Positives = 154/227 (67%), Gaps = 3/227 (1%)
Frame = -1
Query: 673 NQDRVIEFLLNNQHDPVLVLKYFKWAEKQRGFVRGVDALCITLHILVNSRNVWDA-RKLL 497
+Q+++++ LL ++ +P LK+FK E++RGFV+ VD + L IL ++ + R LL
Sbjct: 75 SQNQILDTLLTHKSNPKSALKFFKGVERKRGFVKTVDVFSLLLQILSSTPQTHSSLRNLL 134
Query: 496 NQCLSGDSSPCATILVDRLMETSKRCGL--NPLLFSYVLNSYVRAGRIEDAAECFDRMIK 323
N + GDSSP +LV+ L+E S R G + +F+Y+LNSYVRA +I DA ECF +++
Sbjct: 135 NNYVFGDSSPSPKVLVEHLLECSGRYGFESDSRVFNYLLNSYVRANKIVDAVECFRTLLE 194
Query: 322 YDIVPGISYRNILLNALVRANMIGKARDLYKGMLERGVGCDCFTLDIMMHACLKEGKPEE 143
+D++P + NILL A+VR NMI AR LY M+ERG+ DCFTL ++M ACLKEGK EE
Sbjct: 195 HDVIPWVPIMNILLTAMVRRNMICNARQLYDEMVERGMYGDCFTLHVVMRACLKEGKFEE 254
Query: 142 AEKYFREMKTRVFEFDPVTYNTVILAVCKKPDSKTALELLKEMKNMG 2
AEK+F+E K R + D +Y+ V+ AVCK+ D A +LLKEM+ +G
Sbjct: 255 AEKFFKEAKGRGLKLDAASYSIVVQAVCKRMDLNLACKLLKEMRELG 301
Score = 60.1 bits (144), Expect = 1e-06
Identities = 36/133 (27%), Positives = 63/133 (47%)
Frame = -1
Query: 400 FSYVLNSYVRAGRIEDAAECFDRMIKYDIVPGISYRNILLNALVRANMIGKARDLYKGML 221
F+ V+N + GR+ +A + IK +P N ++N V+ I A Y+ M
Sbjct: 553 FNTVINGLGKTGRVFEAQDKLKDFIKQGFIPTSITYNSIINGFVKEGAIDSALFAYQEMR 612
Query: 220 ERGVGCDCFTLDIMMHACLKEGKPEEAEKYFREMKTRVFEFDPVTYNTVILAVCKKPDSK 41
ERG+ + T +++ K K + A + +MK + E D TY+ +I CK D +
Sbjct: 613 ERGIFPNVITYTSLINGFCKCNKIDLALEMHNDMKNKRMELDVTTYSALIDGFCKMQDME 672
Query: 40 TALELLKEMKNMG 2
+A + E+ +G
Sbjct: 673 SASKFFSELLAIG 685
Score = 58.2 bits (139), Expect = 6e-06
Identities = 41/165 (24%), Positives = 78/165 (47%)
Frame = -1
Query: 502 LLNQCLSGDSSPCATILVDRLMETSKRCGLNPLLFSYVLNSYVRAGRIEDAAECFDRMIK 323
+L C G + L D L K N + ++ +++ + + G E A F++M+
Sbjct: 487 ILGHCKKGCMDDAYSALNDILERGLKP---NAVTYTLLIDGFFKKGDSERAFVMFEQMLA 543
Query: 322 YDIVPGISYRNILLNALVRANMIGKARDLYKGMLERGVGCDCFTLDIMMHACLKEGKPEE 143
I P N ++N L + + +A+D K +++G T + +++ +KEG +
Sbjct: 544 ASIAPTDHTFNTVINGLGKTGRVFEAQDKLKDFIKQGFIPTSITYNSIINGFVKEGAIDS 603
Query: 142 AEKYFREMKTRVFEFDPVTYNTVILAVCKKPDSKTALELLKEMKN 8
A ++EM+ R + +TY ++I CK ALE+ +MKN
Sbjct: 604 ALFAYQEMRERGIFPNVITYTSLINGFCKCNKIDLALEMHNDMKN 648
>ref|XP_006450492.1| hypothetical protein CICLE_v10010816mg [Citrus clementina]
gi|568859583|ref|XP_006483317.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Citrus sinensis]
gi|557553718|gb|ESR63732.1| hypothetical protein
CICLE_v10010816mg [Citrus clementina]
Length = 850
Score = 202 bits (513), Expect = 2e-49
Identities = 129/343 (37%), Positives = 187/343 (54%), Gaps = 5/343 (1%)
Frame = -1
Query: 1015 MRIYVASSSHSPWLLRSYR--KSFCSASTLNSQDPVLKEKPISESGISETSDSKTGFFDK 842
MR + SS P+++R ++ KS CS +S+ P+ E P+SE+
Sbjct: 1 MRSSLTSSPIRPFIIRPFKNTKSICSQPQ-SSEKPISSESPVSEN--------------- 44
Query: 841 SISETTFPVKPSSKIGFLEEPNLEIRVSDKLTSEGTRNAFTQFQQEISSQDTDTVLNQDR 662
FP K + F P F + + Q TD L+Q
Sbjct: 45 ------FPEKITKGSHFSGNPI--------------------FPESNTFQPTD--LSQTS 76
Query: 661 VIEFLLNNQHDPVLVLKYFKWAEKQRGFVRGVDALCITLHILVNSRNVWD-ARKLLNQCL 485
VI LL+ +++PV +YFK E++RGF++ +D C+ LHIL+ R AR LLN +
Sbjct: 77 VISSLLSCRNEPVSAFEYFKRVERRRGFLKSLDTFCVLLHILMKDRESHRYARNLLNHYV 136
Query: 484 SGDSSPCATILVDRLMETSKRCG--LNPLLFSYVLNSYVRAGRIEDAAECFDRMIKYDIV 311
SG S P + ++D L+ET+KR L+ +FSY+L SYVRA RI DA +C + MI+ DI+
Sbjct: 137 SGGSEPTSAAIIDHLIETAKRFDFDLDSGVFSYLLRSYVRADRINDAVDCCNGMIERDII 196
Query: 310 PGISYRNILLNALVRANMIGKARDLYKGMLERGVGCDCFTLDIMMHACLKEGKPEEAEKY 131
P + N +L ALVR N+I +A++ Y M +G+G D T+ +MM ACLKE EEAEKY
Sbjct: 197 PLLRSMNSVLKALVRRNLIDEAKEFYNKMNLKGLGVDSVTIRVMMRACLKEDTTEEAEKY 256
Query: 130 FREMKTRVFEFDPVTYNTVILAVCKKPDSKTALELLKEMKNMG 2
FR+ K + D Y VI A+C+KP+ K A L+KEM++MG
Sbjct: 257 FRDAKALGVKLDARAYRMVIQALCRKPNLKVACGLVKEMRDMG 299
Score = 65.5 bits (158), Expect = 3e-08
Identities = 43/142 (30%), Positives = 67/142 (47%)
Frame = -1
Query: 427 KRCGLNPLLFSYVLNSYVRAGRIEDAAECFDRMIKYDIVPGISYRNILLNALVRANMIGK 248
KR N + +S +++ Y + G E A + D+M I P NI++N L +A
Sbjct: 506 KRVTPNVVTYSVLIDGYFKQGDAERAFDVLDQMENAKISPTDYTSNIIINGLCKAGRTSV 565
Query: 247 ARDLYKGMLERGVGCDCFTLDIMMHACLKEGKPEEAEKYFREMKTRVFEFDPVTYNTVIL 68
A D K M+E+G C T + ++ +KE A +REM + VTY +I
Sbjct: 566 AWDKLKKMVEKGFIPKCLTYNSIIDGFVKEDDMISALTVYREMHESGLSPNVVTYTILIN 625
Query: 67 AVCKKPDSKTALELLKEMKNMG 2
C+K + AL++ EM N G
Sbjct: 626 GFCRKNEIDLALKMRNEMMNEG 647
>ref|XP_007013815.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
cacao] gi|508784178|gb|EOY31434.1| Pentatricopeptide
repeat superfamily protein, putative [Theobroma cacao]
Length = 1159
Score = 201 bits (510), Expect = 5e-49
Identities = 119/285 (41%), Positives = 172/285 (60%), Gaps = 8/285 (2%)
Frame = -1
Query: 832 ETTFPVKPSSKIGFLEEPNLEIRVSDKLTSE----GTRNAFTQFQQEISSQDT-DTVLNQ 668
+T P P+ FLE+ + K S+ G+ T ++ T DT L +
Sbjct: 324 QTPLPGNPNPNTNFLEKVTSDSHCPSKSISDSDSPGSLIPPTPKDPRLTPSLTQDTSLTR 383
Query: 667 DRVIEFLLNNQHDPVLVLKYFKWAEKQRGFVRGVDALCITLHILVNSRNV-WDARKLLNQ 491
VI LL ++++P LKYF++ E +RGFVR +D C+ LHILV S+ + LLN+
Sbjct: 384 THVINTLLIHRNNPESALKYFRFVENKRGFVRSIDVFCVLLHILVGSQQTNKQVKYLLNR 443
Query: 490 CLSGDSSPCATILVDRLMETSKRCG--LNPLLFSYVLNSYVRAGRIEDAAECFDRMIKYD 317
++GDS P + +D L++ +KR L+ +F+Y+LNSYVR RI+DA +CF+ MI++D
Sbjct: 444 FVAGDSGPTPIVFLDHLIDIAKRFDFELDSRVFNYLLNSYVRV-RIDDAVDCFNGMIEHD 502
Query: 316 IVPGISYRNILLNALVRANMIGKARDLYKGMLERGVGCDCFTLDIMMHACLKEGKPEEAE 137
IVP + + NILL ALVR N+I KAR+LY M+ GV D T+ +MM A LK+GKP EAE
Sbjct: 503 IVPMLPFMNILLTALVRGNLIDKARELYDKMVSIGVRGDRVTVLLMMRAFLKDGKPWEAE 562
Query: 136 KYFREMKTRVFEFDPVTYNTVILAVCKKPDSKTALELLKEMKNMG 2
++F+E K R E D Y+ I A C+KPD A LL+EM++ G
Sbjct: 563 EFFKEAKARGTELDAAVYSIAIQASCQKPDLNMAGGLLREMRDRG 607
Score = 78.2 bits (191), Expect = 5e-12
Identities = 47/169 (27%), Positives = 83/169 (49%), Gaps = 2/169 (1%)
Frame = -1
Query: 502 LLNQCLSGDSSPCATILVDRLMETSKRCGLNPLLFSY--VLNSYVRAGRIEDAAECFDRM 329
+L C +G+ T+ + L G+ P + +Y +++ + + G E A + FD M
Sbjct: 793 ILAHCRAGNMDMAHTVFSEMLER-----GIKPTVITYTILMDGHFKKGNAEQALDVFDEM 847
Query: 328 IKYDIVPGISYRNILLNALVRANMIGKARDLYKGMLERGVGCDCFTLDIMMHACLKEGKP 149
+ +I P NI++N L + +ARD+ K +++G C T + +++ +KEG
Sbjct: 848 VGVNITPSDFTFNIIINGLAKVGRTSEARDMLKKFVDKGFVPICLTYNSIINGFVKEGAM 907
Query: 148 EEAEKYFREMKTRVFEFDPVTYNTVILAVCKKPDSKTALELLKEMKNMG 2
A +REM + VTY T+I CK + AL++ EMK+ G
Sbjct: 908 NSALAVYREMCESGLSPNVVTYTTLINGFCKSHNIDLALKMQYEMKSKG 956
Score = 65.5 bits (158), Expect = 3e-08
Identities = 38/143 (26%), Positives = 69/143 (48%)
Frame = -1
Query: 430 SKRCGLNPLLFSYVLNSYVRAGRIEDAAECFDRMIKYDIVPGISYRNILLNALVRANMIG 251
SK L+ FS +++ + + ++ A E F + + + P + N ++ N +
Sbjct: 954 SKGLRLDVPAFSALIDGFCKEQDMDRACELFSELQQVGLSPNVIVYNSMIRGFRNVNNME 1013
Query: 250 KARDLYKGMLERGVGCDCFTLDIMMHACLKEGKPEEAEKYFREMKTRVFEFDPVTYNTVI 71
A DL+K M+ G+ CD T ++ L+EGK A + EM + E D +TY ++
Sbjct: 1014 AALDLHKKMINEGILCDLQTYTTLIDGLLREGKLLFAFDLYSEMLAKGIEPDIITYTVLL 1073
Query: 70 LAVCKKPDSKTALELLKEMKNMG 2
+C K + A ++L+EM G
Sbjct: 1074 NGLCNKGQLENARKILEEMDRKG 1096
Score = 58.5 bits (140), Expect = 4e-06
Identities = 41/167 (24%), Positives = 74/167 (44%), Gaps = 1/167 (0%)
Frame = -1
Query: 499 LNQCLSGDSSPCATILVDRLMETSKRCGL-NPLLFSYVLNSYVRAGRIEDAAECFDRMIK 323
+N + G C+ L + + G+ N ++ +L + G++ +A + RM
Sbjct: 720 VNSLIRGFLEACSLKEASNLFDEAVESGIANVFTYNVLLYHFCNDGKVNEAHSLWQRMED 779
Query: 322 YDIVPGISYRNILLNALVRANMIGKARDLYKGMLERGVGCDCFTLDIMMHACLKEGKPEE 143
+VP + N ++ A RA + A ++ MLERG+ T I+M K+G E+
Sbjct: 780 NGVVPTYASYNNMILAHCRAGNMDMAHTVFSEMLERGIKPTVITYTILMDGHFKKGNAEQ 839
Query: 142 AEKYFREMKTRVFEFDPVTYNTVILAVCKKPDSKTALELLKEMKNMG 2
A F EM T+N +I + K + A ++LK+ + G
Sbjct: 840 ALDVFDEMVGVNITPSDFTFNIIINGLAKVGRTSEARDMLKKFVDKG 886
>ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223545497|gb|EEF47002.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 927
Score = 200 bits (508), Expect = 9e-49
Identities = 113/284 (39%), Positives = 170/284 (59%), Gaps = 6/284 (2%)
Frame = -1
Query: 835 SETTFPVKPSSKIGFLEEPNLEIRVSDKLTSEGTRNAFTQFQQEIS---SQDTDTVLNQD 665
S+ FP +P S + PN + S + N +++ D+VL +
Sbjct: 26 SQPQFPNEPQSSLYQNSYPNFSYAEKNSQDSNFSENLIFLKSRQVELTKPASQDSVLART 85
Query: 664 RVIEFLLNNQHDPVLVLKYFKWAEKQRGFVRGVDALCITLHILV-NSRNVWDARKLLNQC 488
VI+ LL+ + DP L YFK E RGFVR +D+LC+ LHIL +S + A+ LLN+
Sbjct: 86 NVIDTLLSYKRDPYSALTYFKQLECTRGFVRSLDSLCVLLHILTRSSETLKQAQNLLNRF 145
Query: 487 LSGDSSPCATILVDRLMETSKRCGLNP--LLFSYVLNSYVRAGRIEDAAECFDRMIKYDI 314
+SGDS P ILVD + ++KR + +++Y+LNSY++A ++ DA CF+R+++ DI
Sbjct: 146 ISGDSGPMPNILVDHFIGSTKRFDFDSDIRIYNYLLNSYIKANKLNDAIGCFNRLVESDI 205
Query: 313 VPGISYRNILLNALVRANMIGKARDLYKGMLERGVGCDCFTLDIMMHACLKEGKPEEAEK 134
VP I + N LL ALV+ +MI +AR++Y+ M+ +GV DCFT+ IMM A LK+ EEA+K
Sbjct: 206 VPWIKFLNFLLTALVKNDMIYEAREVYEKMVLKGVHGDCFTVHIMMRANLKDNNEEEAKK 265
Query: 133 YFREMKTRVFEFDPVTYNTVILAVCKKPDSKTALELLKEMKNMG 2
+F E K+R + D Y+ VI A CK D + A LLK+M++ G
Sbjct: 266 FFLEAKSRGVKLDAAAYSIVIQAFCKNLDVELACGLLKDMRDKG 309
Score = 86.7 bits (213), Expect = 1e-14
Identities = 53/169 (31%), Positives = 84/169 (49%), Gaps = 2/169 (1%)
Frame = -1
Query: 502 LLNQCLSGDSSPCATILVDRLMETSKRCGLNP--LLFSYVLNSYVRAGRIEDAAECFDRM 329
+L C G+ A++ D L CGL P + +S +++ Y + G E A FDRM
Sbjct: 495 ILGHCRQGNLDMAASVFSDML-----DCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRM 549
Query: 328 IKYDIVPGISYRNILLNALVRANMIGKARDLYKGMLERGVGCDCFTLDIMMHACLKEGKP 149
+ +IVP NI +N L + +A+D+ K +E+G C T + +M +KEG
Sbjct: 550 VDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSV 609
Query: 148 EEAEKYFREMKTRVFEFDPVTYNTVILAVCKKPDSKTALELLKEMKNMG 2
A +REM + +TY T+I CK ++ AL++ EM+N G
Sbjct: 610 SSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKG 658
>ref|XP_007136983.1| hypothetical protein PHAVU_009G090400g [Phaseolus vulgaris]
gi|561010070|gb|ESW08977.1| hypothetical protein
PHAVU_009G090400g [Phaseolus vulgaris]
Length = 741
Score = 196 bits (498), Expect = 1e-47
Identities = 117/291 (40%), Positives = 174/291 (59%), Gaps = 4/291 (1%)
Frame = -1
Query: 862 KTGFFDKSISETTFPVKPSSKIGFLEEPNLEIRVSDKLTSEGTRNAFTQFQQEISSQDTD 683
+T F + S+ + P S++ FL N + +K+ S T N + E S ++
Sbjct: 2 RTRFLNIISSDPPKNLSPLSQL-FLISTNSD-HFPEKIVS--TSNFPEKTPPEAQSPESP 57
Query: 682 TVLNQDRVIEFLLNNQHDPVLVLKYFKWAEKQRGFVRGVDALCITLHILVNSRNVW-DAR 506
+ +Q+ V++ LL + DP+ L +FK E++RGFV+ VD LC+ L IL +S + DA+
Sbjct: 58 LIPSQNEVLDTLLLRKADPISALMFFKQVERKRGFVKTVDILCLLLQILASSPDTHGDAK 117
Query: 505 KLLNQCLSGDSSPCATILVDRLMETSKRCGL---NPLLFSYVLNSYVRAGRIEDAAECFD 335
LLN + GDS+PCA +LV+ L+E ++R G + +F+Y+LNSYVRA +I DA ECF
Sbjct: 118 YLLNNYVFGDSAPCAKVLVELLVECAERYGFELSDSRVFNYLLNSYVRANKITDAVECFR 177
Query: 334 RMIKYDIVPGISYRNILLNALVRANMIGKARDLYKGMLERGVGCDCFTLDIMMHACLKEG 155
M+++ ++P + NILL A+VR NM +Y M+ER + DC+TL I+M ACLK G
Sbjct: 178 TMLEHGVLPWVPIVNILLTAMVRRNMAYNVCQVYDEMVERELYGDCYTLHILMRACLKGG 237
Query: 154 KPEEAEKYFREMKTRVFEFDPVTYNTVILAVCKKPDSKTALELLKEMKNMG 2
+ EA YF E R + D Y+ VI AVC+ PD A +LLKEMK +G
Sbjct: 238 RFAEAWNYFEEAVGRGLKLDAAAYSIVIQAVCRVPDLNLACKLLKEMKELG 288
Score = 65.5 bits (158), Expect = 3e-08
Identities = 33/133 (24%), Positives = 64/133 (48%)
Frame = -1
Query: 400 FSYVLNSYVRAGRIEDAAECFDRMIKYDIVPGISYRNILLNALVRANMIGKARDLYKGML 221
F+ ++N + GR+ +A + + IK VP N +++ V+ I A Y+ M
Sbjct: 540 FNTIMNGLCKVGRVSEAKDKLNTFIKQGFVPTSMTYNCIIDGFVKEGAIDSAESTYREMC 599
Query: 220 ERGVGCDCFTLDIMMHACLKEGKPEEAEKYFREMKTRVFEFDPVTYNTVILAVCKKPDSK 41
+ G+ + T +++ K K + A K + +MK++ E D Y+ +I CK D +
Sbjct: 600 DSGISPNVITCTTLINGFFKTNKIDLALKMYDDMKSKGLELDITAYSALIDGFCKMRDME 659
Query: 40 TALELLKEMKNMG 2
A ++ E+ +G
Sbjct: 660 NASKIFSELLEVG 672
Score = 58.5 bits (140), Expect = 4e-06
Identities = 37/143 (25%), Positives = 69/143 (48%), Gaps = 2/143 (1%)
Frame = -1
Query: 424 RCGLNPLLFSY--VLNSYVRAGRIEDAAECFDRMIKYDIVPGISYRNILLNALVRANMIG 251
+ GL P + +Y ++ + G + A + FD+M+ DIVP N ++N L + +
Sbjct: 495 KSGLKPNVITYTILMEGSFKKGDCDRAFDVFDQMVAADIVPTDYTFNTIMNGLCKVGRVS 554
Query: 250 KARDLYKGMLERGVGCDCFTLDIMMHACLKEGKPEEAEKYFREMKTRVFEFDPVTYNTVI 71
+A+D +++G T + ++ +KEG + AE +REM + +T T+I
Sbjct: 555 EAKDKLNTFIKQGFVPTSMTYNCIIDGFVKEGAIDSAESTYREMCDSGISPNVITCTTLI 614
Query: 70 LAVCKKPDSKTALELLKEMKNMG 2
K AL++ +MK+ G
Sbjct: 615 NGFFKTNKIDLALKMYDDMKSKG 637
>gb|EYU21955.1| hypothetical protein MIMGU_mgv1a001349mg [Mimulus guttatus]
Length = 836
Score = 195 bits (495), Expect = 3e-47
Identities = 108/242 (44%), Positives = 149/242 (61%), Gaps = 4/242 (1%)
Frame = -1
Query: 715 FQQEISSQDTDTVLNQDRVIEFLLNNQHDPVLVLKYFKWAEKQRGFVRGV-DALCITLHI 539
FQ+ IS L+Q V+E LL+N +DP L YF+WAEKQRGFVR + D+ + LHI
Sbjct: 59 FQKPISENPR---LSQANVVETLLSNFNDPRSALDYFRWAEKQRGFVREIGDSFLVLLHI 115
Query: 538 LVNSR-NVWDARKLLNQCLSGDSSPCATILVDRLMETSKRCGL--NPLLFSYVLNSYVRA 368
LV+S + AR LLN LS DS+P +LV RL++ S + G +P +F Y LN YVRA
Sbjct: 116 LVSSHYHHGSARNLLNNYLSSDSAPSGGVLVQRLIDCSDKFGFRRSPRIFDYALNGYVRA 175
Query: 367 GRIEDAAECFDRMIKYDIVPGISYRNILLNALVRANMIGKARDLYKGMLERGVGCDCFTL 188
R +DA +CF ++ ++P + N L++L+R +MI +AR L+ G++ + + DC T+
Sbjct: 176 QRYKDAEDCFYALVSRGVIPCVRILNNFLHSLIRTSMIDEARGLFGGIVSKKLSYDCATV 235
Query: 187 DIMMHACLKEGKPEEAEKYFREMKTRVFEFDPVTYNTVILAVCKKPDSKTALELLKEMKN 8
++MM A L+EGK EEAEK+F E K DP YNT + C KPD A LL EMK
Sbjct: 236 NMMMCASLREGKTEEAEKFFLEAKRSGIILDPFVYNTAVRTACMKPDLNVAFVLLSEMKE 295
Query: 7 MG 2
G
Sbjct: 296 KG 297
Score = 65.9 bits (159), Expect = 3e-08
Identities = 48/189 (25%), Positives = 79/189 (41%), Gaps = 22/189 (11%)
Frame = -1
Query: 502 LLNQCLSGDSSPCATILVDRLMETSKRCGLNPLLFSYVLNSYVRAGRIEDAAECFDRMIK 323
+L C G A +L + + K N + +S +++ Y + G E A FD M+
Sbjct: 483 ILGNCRKGFMDVAAALLSEMAEKNVKP---NVITYSILVDGYFKKGETEKAIALFDSMLT 539
Query: 322 YDIVPGISYRNILLNALVRANMIGKARDLYKGMLERGVGCDCFTLDIMMHACLKEGKPEE 143
I P N ++N L R A+D + + +G C T + +++ +KEG+
Sbjct: 540 SGISPTDVTYNTVINGLCRVGQTVAAKDRMEEFVAKGFAPICMTYNSLINGFMKEGEVNS 599
Query: 142 ----------------------AEKYFREMKTRVFEFDPVTYNTVILAVCKKPDSKTALE 29
A K REM+ + E D YN +I A CK+ D +A E
Sbjct: 600 ALAVYNEMCGTGILPNRKNLDLALKMQREMRAKGIEMDVTCYNALIDAFCKRNDMNSARE 659
Query: 28 LLKEMKNMG 2
L E+ ++G
Sbjct: 660 LFDEILDVG 668
Score = 60.5 bits (145), Expect = 1e-06
Identities = 40/138 (28%), Positives = 67/138 (48%), Gaps = 1/138 (0%)
Frame = -1
Query: 412 NPLLFSYVLNSYVRAGRIEDAAECFDRMIKYDIVPGI-SYRNILLNALVRANMIGKARDL 236
N ++ +++ + GR+ DA +D+MI + I P + SY N++L R + A L
Sbjct: 440 NVFTYNNLISWFCEGGRLGDAIRVWDKMIDHGIEPSVVSYNNMILGNC-RKGFMDVAAAL 498
Query: 235 YKGMLERGVGCDCFTLDIMMHACLKEGKPEEAEKYFREMKTRVFEFDPVTYNTVILAVCK 56
M E+ V + T I++ K+G+ E+A F M T VTYNTVI +C+
Sbjct: 499 LSEMAEKNVKPNVITYSILVDGYFKKGETEKAIALFDSMLTSGISPTDVTYNTVINGLCR 558
Query: 55 KPDSKTALELLKEMKNMG 2
+ A + ++E G
Sbjct: 559 VGQTVAAKDRMEEFVAKG 576
Score = 57.8 bits (138), Expect = 7e-06
Identities = 43/199 (21%), Positives = 87/199 (43%), Gaps = 12/199 (6%)
Frame = -1
Query: 574 RGVDALCITLHILVNSRNVWDARKLLNQCLSGDSSPCAT------------ILVDRLMET 431
+G +C+T + L+N + +N L+ + C T + + R M
Sbjct: 575 KGFAPICMTYNSLING---FMKEGEVNSALAVYNEMCGTGILPNRKNLDLALKMQREMR- 630
Query: 430 SKRCGLNPLLFSYVLNSYVRAGRIEDAAECFDRMIKYDIVPGISYRNILLNALVRANMIG 251
+K ++ ++ +++++ + + A E FD ++ + P N ++ +
Sbjct: 631 AKGIEMDVTCYNALIDAFCKRNDMNSARELFDEILDVGLSPTTGVYNTMIGGYRDLYNME 690
Query: 250 KARDLYKGMLERGVGCDCFTLDIMMHACLKEGKPEEAEKYFREMKTRVFEFDPVTYNTVI 71
A DLYK M G+ CD T ++ LK G A + ++EM + D +TY+ ++
Sbjct: 691 SALDLYKRMKNEGIQCDLETYTTLIDGLLKVGNIVLASETYQEMLAKNIVPDVITYSVLV 750
Query: 70 LAVCKKPDSKTALELLKEM 14
+C K A ++L+EM
Sbjct: 751 RGLCNKGQVANARKVLEEM 769
>ref|XP_003607325.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355508380|gb|AES89522.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 834
Score = 189 bits (480), Expect = 2e-45
Identities = 100/237 (42%), Positives = 151/237 (63%), Gaps = 3/237 (1%)
Frame = -1
Query: 703 ISSQDTDTVLNQDRVIEFLLNNQHDPVLVLKYFKWAEKQRGFVRGVDALCITLHILV-NS 527
I S ++ ++R + LL+++ +P LK+F E++RGFV+ VD + + +HIL NS
Sbjct: 49 IISPESQPSEKKNRFLVTLLSHKSNPKSALKFFHQVERKRGFVKTVDFISLLIHILSSNS 108
Query: 526 RNVWDARKLLNQCLSGDSSPCATILVDRLMETSKRCGL--NPLLFSYVLNSYVRAGRIED 353
+ + LLN + GD++P A + V+ L+E S R G + +F+Y+L S+VR +I D
Sbjct: 109 KTCSSLQFLLNNYVFGDATPSAKVFVECLLECSGRYGFESDSRVFNYLLKSFVRVNKITD 168
Query: 352 AAECFDRMIKYDIVPGISYRNILLNALVRANMIGKARDLYKGMLERGVGCDCFTLDIMMH 173
A ECF M+++D+VP + N LL A+VR NM+ AR LY M+ERG+ DC+TL ++M
Sbjct: 169 AVECFRTMLEHDLVPWVPIMNNLLTAMVRRNMVCDARQLYDEMVERGIYGDCYTLHVVMR 228
Query: 172 ACLKEGKPEEAEKYFREMKTRVFEFDPVTYNTVILAVCKKPDSKTALELLKEMKNMG 2
AC+KEGK EE EK+F+E K R E D Y+ ++ AVC++ D A ELLKEM+ G
Sbjct: 229 ACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILVQAVCRRLDLNLACELLKEMREFG 285
>ref|XP_004245400.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Solanum lycopersicum]
Length = 850
Score = 162 bits (410), Expect = 2e-37
Identities = 90/229 (39%), Positives = 139/229 (60%), Gaps = 4/229 (1%)
Frame = -1
Query: 685 DTVLNQDRVIEFLLNNQHDPVLVLKYFKWAEKQRGFVRGV-DALCITLHILVNSR-NVWD 512
D ++ V++ LL+++ DP +YF+ A QRGF+ D + LHILVNS +
Sbjct: 65 DVKFTKNHVVDVLLSHRDDPDSAYRYFQTARLQRGFLHSKSDPFFVLLHILVNSAMHQHK 124
Query: 511 ARKLLNQCLSGDSSPCATILVDRLMETSKRC--GLNPLLFSYVLNSYVRAGRIEDAAECF 338
+R+LL+ S DS P AT++ + L++ K GLNP +F+++++S ++A R+ DA +CF
Sbjct: 125 SRRLLDYYASSDSGPSATVVFNGLVKCGKTFDFGLNPKIFNFLVSSCMKANRLNDAIDCF 184
Query: 337 DRMIKYDIVPGISYRNILLNALVRANMIGKARDLYKGMLERGVGCDCFTLDIMMHACLKE 158
+ M+++DI+ I N LL LVR M+G A DLY ++ RG DC T+ I+M ACL+E
Sbjct: 185 NAMLEHDIMLWIPIMNSLLKKLVRQGMVGVAEDLYTDIVSRGTHYDCGTVHILMEACLRE 244
Query: 157 GKPEEAEKYFREMKTRVFEFDPVTYNTVILAVCKKPDSKTALELLKEMK 11
GK +EA K E K +FD Y+ + CK+ + AL+LL+EMK
Sbjct: 245 GKMKEAVKLLEETKMSGIKFDAGLYSCGVYVACKEQNLSLALKLLEEMK 293
Score = 62.8 bits (151), Expect = 2e-07
Identities = 34/139 (24%), Positives = 70/139 (50%)
Frame = -1
Query: 430 SKRCGLNPLLFSYVLNSYVRAGRIEDAAECFDRMIKYDIVPGISYRNILLNALVRANMIG 251
+K L+ + ++ +++ + + ++ A+E FD +++ I P + N +++ + N +
Sbjct: 644 NKEIKLDVIAYAVLIDGFCKRRDMKSASELFDEILQVGISPNLFVYNSMMSGFINVNNME 703
Query: 250 KARDLYKGMLERGVGCDCFTLDIMMHACLKEGKPEEAEKYFREMKTRVFEFDPVTYNTVI 71
A L M+ GV CD T ++ LK+GK + A F EM + D +TY ++
Sbjct: 704 AALVLRDKMINEGVPCDLKTYTTLIDGLLKDGKIDLASHLFTEMLGKGIMPDDITYTVLV 763
Query: 70 LAVCKKPDSKTALELLKEM 14
+ K + A ++L+EM
Sbjct: 764 HGLSNKGQVENAHKILEEM 782
Score = 59.7 bits (143), Expect = 2e-06
Identities = 34/142 (23%), Positives = 69/142 (48%), Gaps = 3/142 (2%)
Frame = -1
Query: 418 GLNPL--LFSYVLNSYVRAGRIEDAAECFDRMIKY-DIVPGISYRNILLNALVRANMIGK 248
G++P F+ V++ + G+ +A + R+++ D++P N L++ ++ + +
Sbjct: 540 GISPTDYTFNTVISGMSKVGKTSEAKDLLKRIVEGGDLLPTCMSYNSLIDGFLKEDDVSS 599
Query: 247 ARDLYKGMLERGVGCDCFTLDIMMHACLKEGKPEEAEKYFREMKTRVFEFDPVTYNTVIL 68
A +Y+ M G+ D T ++ K A K +EM+ + + D + Y +I
Sbjct: 600 ALSVYREMCNSGISPDVVTYTTLIDGLCKSNNINLALKLLKEMRNKEIKLDVIAYAVLID 659
Query: 67 AVCKKPDSKTALELLKEMKNMG 2
CK+ D K+A EL E+ +G
Sbjct: 660 GFCKRRDMKSASELFDEILQVG 681
Score = 58.2 bits (139), Expect = 6e-06
Identities = 38/138 (27%), Positives = 69/138 (50%), Gaps = 1/138 (0%)
Frame = -1
Query: 412 NPLLFSYVLNSYVRAGRIEDAAECFDRMIKYDIVPGI-SYRNILLNALVRANMIGKARDL 236
N +++ ++ + G+++ A +D+M+ I+P I SY NI+L NM KA D
Sbjct: 439 NVFVYNSIIAWLCKKGQMDKAQNTWDKMVANGILPTIISYNNIILGNCRNGNM-DKALDF 497
Query: 235 YKGMLERGVGCDCFTLDIMMHACLKEGKPEEAEKYFREMKTRVFEFDPVTYNTVILAVCK 56
+ + ER + + T I++ ++G ++AE F +M + T+NTVI + K
Sbjct: 498 FSQLPERHLKANVVTYSILIDGYFRKGDADKAENMFDQMVSSGISPTDYTFNTVISGMSK 557
Query: 55 KPDSKTALELLKEMKNMG 2
+ A +LLK + G
Sbjct: 558 VGKTSEAKDLLKRIVEGG 575
>ref|NP_181456.1| pentatricopeptide repeat protein LOJ [Arabidopsis thaliana]
gi|75100007|sp|O80958.1|PP194_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g39230, mitochondrial; AltName: Full=Protein LATERAL
ORGAN JUNCTION; Flags: Precursor
gi|3402682|gb|AAC28985.1| unknown protein [Arabidopsis
thaliana] gi|330254554|gb|AEC09648.1| pentatricopeptide
repeat protein LOJ [Arabidopsis thaliana]
Length = 867
Score = 161 bits (407), Expect = 5e-37
Identities = 97/280 (34%), Positives = 159/280 (56%), Gaps = 10/280 (3%)
Frame = -1
Query: 820 PVKPSSKIGFLEEPNLEIR-VSDKLTSEGT------RNAFTQFQQEISSQDTDTVLNQDR 662
P SS+ FL P+ + R +SD T + + + S+ +T+ ++ R
Sbjct: 22 PKPISSQTRFLHPPDNQSRDISDSTTETISTLEFPHKTSVPNHSPLTSTSETENHVDDAR 81
Query: 661 VIEFLLNNQHDPVLVLKYFKWAEKQRGFVRGVDALCITLHILVNSRNVWD-ARKLLNQCL 485
VIE LL ++DPV L+Y W + G D + +HIL++S + D A LL +
Sbjct: 82 VIEVLLGRRNDPVSALQYCNWVKPLHRLCEGGDVFWVLIHILLSSIHTHDRASNLLVMFV 141
Query: 484 SGDSSPCATILVDRLMETSKRCG--LNPLLFSYVLNSYVRAGRIEDAAECFDRMIKYDIV 311
S + + ++V+ L+++SKR G L P F+Y+LN+Y+R R++ A +CF M+ +V
Sbjct: 142 SNNPTLIPNVMVNNLVDSSKRFGFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVV 201
Query: 310 PGISYRNILLNALVRANMIGKARDLYKGMLERGVGCDCFTLDIMMHACLKEGKPEEAEKY 131
P + Y N +L++LVR+N+I +A+++Y M+ GV D T ++M A L+E KPEEA K
Sbjct: 202 PFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKI 261
Query: 130 FREMKTRVFEFDPVTYNTVILAVCKKPDSKTALELLKEMK 11
FR + +R E D + ++ + A CK PD AL+LL+EM+
Sbjct: 262 FRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMR 301
Score = 59.7 bits (143), Expect = 2e-06
Identities = 39/154 (25%), Positives = 72/154 (46%), Gaps = 2/154 (1%)
Frame = -1
Query: 472 SPCATILVDRLMETSKRCGLNPLLFSY--VLNSYVRAGRIEDAAECFDRMIKYDIVPGIS 299
+P + +D L E + G+ +Y V+ ++V+ G +E+A D M+ + I +
Sbjct: 287 TPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVI 346
Query: 298 YRNILLNALVRANMIGKARDLYKGMLERGVGCDCFTLDIMMHACLKEGKPEEAEKYFREM 119
L+N + N +GKA DL+ M E G+ D +M+ K + E+A +++ M
Sbjct: 347 AATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRM 406
Query: 118 KTRVFEFDPVTYNTVILAVCKKPDSKTALELLKE 17
K+ V +T+I K + ALE+ +
Sbjct: 407 KSVRIAPSSVLVHTMIQGCLKAESPEAALEIFND 440
Score = 58.2 bits (139), Expect = 6e-06
Identities = 38/163 (23%), Positives = 74/163 (45%)
Frame = -1
Query: 502 LLNQCLSGDSSPCATILVDRLMETSKRCGLNPLLFSYVLNSYVRAGRIEDAAECFDRMIK 323
++ CL +S A + + E+ G + + + + + G+++ A M +
Sbjct: 421 MIQGCLKAESPEAALEIFNDSFESWIAHGF---MCNKIFLLFCKQGKVDAATSFLKMMEQ 477
Query: 322 YDIVPGISYRNILLNALVRANMIGKARDLYKGMLERGVGCDCFTLDIMMHACLKEGKPEE 143
I P + + N ++ A R + AR ++ MLE+G+ + FT I++ K +
Sbjct: 478 KGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQN 537
Query: 142 AEKYFREMKTRVFEFDPVTYNTVILAVCKKPDSKTALELLKEM 14
A +M FE + V YNT+I +CK + A E+L+ +
Sbjct: 538 AWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNL 580
>ref|XP_002879788.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297325627|gb|EFH56047.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 867
Score = 159 bits (401), Expect = 2e-36
Identities = 98/283 (34%), Positives = 159/283 (56%), Gaps = 10/283 (3%)
Frame = -1
Query: 820 PVKPSSKIGFLEEPNLEIR-VSDKLTSEGTRNAFTQ------FQQEISSQDTDTVLNQDR 662
P SS+ FL P+ + R +SD T + F IS+ +TD ++
Sbjct: 22 PKPISSQYRFLHPPDNQSRDISDSTTEVFSELEFPHKASGPNHSPLISTSETDNHVDDAH 81
Query: 661 VIEFLLNNQHDPVLVLKYFKWAEKQRGFVRGVDALCITLHILVNSRNVWD-ARKLLNQCL 485
VIE LL ++DPV L+Y W + R G D + +HIL +S + D A LL +
Sbjct: 82 VIEVLLGRRNDPVSALQYCNWVKPLRSLCEGGDVFWVLIHILFSSPHTHDRASNLLVMFV 141
Query: 484 SGDSSPCATILVDRLMETSKRCG--LNPLLFSYVLNSYVRAGRIEDAAECFDRMIKYDIV 311
S + + + +V+ L+++SKR L+ F+Y+LN+Y+R R++ A +CF+ M+ ++V
Sbjct: 142 SSNPTLIPSAMVNNLVDSSKRFDFELSSRAFNYLLNAYIRNRRMDYAVDCFNLMVDRNVV 201
Query: 310 PGISYRNILLNALVRANMIGKARDLYKGMLERGVGCDCFTLDIMMHACLKEGKPEEAEKY 131
P + Y N +L++LVR+N+I +A+++Y M+ GV D T ++M A L+E KPEEA K
Sbjct: 202 PFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAMKI 261
Query: 130 FREMKTRVFEFDPVTYNTVILAVCKKPDSKTALELLKEMKNMG 2
FR + +R E D + ++ + A CK D AL+LL+EM+ G
Sbjct: 262 FRRVMSRGAEPDGLLFSLAVQAACKMKDLVMALDLLREMREKG 304
Score = 60.1 bits (144), Expect = 1e-06
Identities = 41/173 (23%), Positives = 77/173 (44%)
Frame = -1
Query: 529 SRNVWDARKLLNQCLSGDSSPCATILVDRLMETSKRCGLNPLLFSYVLNSYVRAGRIEDA 350
S NV L+N + A ++ + SK L+ + +++ + + ++ A
Sbjct: 622 SPNVVTFTSLINGFCKSNRMDLALEMIHEMK--SKDLKLDVPAYGALIDGFCKKNDMKTA 679
Query: 349 AECFDRMIKYDIVPGISYRNILLNALVRANMIGKARDLYKGMLERGVGCDCFTLDIMMHA 170
F +++ ++P +S N L++ + A DLYK M+ G+ CD FT M+
Sbjct: 680 YTLFSELLELGLMPNVSVYNNLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDG 739
Query: 169 CLKEGKPEEAEKYFREMKTRVFEFDPVTYNTVILAVCKKPDSKTALELLKEMK 11
LK+G A + E+ D + Y ++ + KK A ++L+EMK
Sbjct: 740 LLKDGNLILASDLYSELLALGIVPDEILYVVLVNGLSKKGQFVRASKMLEEMK 792
Score = 59.3 bits (142), Expect = 2e-06
Identities = 44/165 (26%), Positives = 79/165 (47%), Gaps = 1/165 (0%)
Frame = -1
Query: 505 KLLNQCLSGDSSPCATILVDRLMETSKRCGLNPLLFSYVLNSYVRAGRIEDAAECFDRMI 326
K++ CL +S A + + ET G + + + + G++ DAA F RM+
Sbjct: 420 KMIQGCLKAESPEAALEIFNDSFETWIAHGF---MCNKIFLLLCKQGKV-DAATSFLRMM 475
Query: 325 KYD-IVPGISYRNILLNALVRANMIGKARDLYKGMLERGVGCDCFTLDIMMHACLKEGKP 149
+ I P + + N ++ A R + AR ++ MLE+G+ + FT I++ K
Sbjct: 476 ENKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLQPNNFTYSILIDGFFKNQDE 535
Query: 148 EEAEKYFREMKTRVFEFDPVTYNTVILAVCKKPDSKTALELLKEM 14
+ A + +M FE + V YNT+I +CK + A E+L+ +
Sbjct: 536 QNAWEVINQMIASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNL 580
Score = 57.4 bits (137), Expect = 9e-06
Identities = 34/140 (24%), Positives = 65/140 (46%), Gaps = 3/140 (2%)
Frame = -1
Query: 412 NPLLFSYVLNSYVRAGRIEDAAECFDRMIK---YDIVPGISYRNILLNALVRANMIGKAR 242
N ++++ ++N + G+ A E +IK Y + G + N +++ + A
Sbjct: 553 NEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSM--GCTSYNSIIDGFFKEGDTDSAV 610
Query: 241 DLYKGMLERGVGCDCFTLDIMMHACLKEGKPEEAEKYFREMKTRVFEFDPVTYNTVILAV 62
+ Y+ M E G+ + T +++ K + + A + EMK++ + D Y +I
Sbjct: 611 EAYREMSENGISPNVVTFTSLINGFCKSNRMDLALEMIHEMKSKDLKLDVPAYGALIDGF 670
Query: 61 CKKPDSKTALELLKEMKNMG 2
CKK D KTA L E+ +G
Sbjct: 671 CKKNDMKTAYTLFSELLELG 690
>ref|XP_004301621.1| PREDICTED: pentatricopeptide repeat-containing protein At2g39230,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 374
Score = 158 bits (399), Expect = 4e-36
Identities = 94/238 (39%), Positives = 131/238 (55%), Gaps = 4/238 (1%)
Frame = -1
Query: 703 ISSQDTDTVLNQDRVIEFLLNNQHDPVLVLKYFKWAEKQRGFVRGVDALCITLHILVNSR 524
+SSQ Q +++ LL+++ DP L FK + + + + LHIL+
Sbjct: 22 LSSQPNPLPPTQTQLLTSLLSHKSDPSSALHLFKTNPSS---LHSLHTVAVMLHILMPFP 78
Query: 523 NVWD-ARKLLNQCLSGDSSPCATILVDRLMETSKRCGLNPL---LFSYVLNSYVRAGRIE 356
A+ LL +SG S P +LVD L++ +KR + + +FSY+LNSYVRA RI
Sbjct: 79 ETHARAKTLLYSYVSGGSGPAPALLVDSLLDCAKRFEFDSVSSPVFSYLLNSYVRADRIR 138
Query: 355 DAAECFDRMIKYDIVPGISYRNILLNALVRANMIGKARDLYKGMLERGVGCDCFTLDIMM 176
DA C +RM++ + + NI+L AL R NM +A++LY GM+ RGVG DC TL +MM
Sbjct: 139 DAVNCLERMVEIGVCGSVECMNIVLKALFRRNMFKEAKELYGGMVGRGVGGDCATLHVMM 198
Query: 175 HACLKEGKPEEAEKYFREMKTRVFEFDPVTYNTVILAVCKKPDSKTALELLKEMKNMG 2
C KEGKP EAE+YFR + R D Y+ I A C D L LL EM+ MG
Sbjct: 199 RVCFKEGKPGEAEEYFRNARGRGIAADGELYDVAIGAACMSGDLCLGLVLLDEMREMG 256
>ref|XP_006364273.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like isoform X1 [Solanum tuberosum]
gi|565397380|ref|XP_006364274.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like isoform X2 [Solanum tuberosum]
Length = 854
Score = 156 bits (394), Expect = 2e-35
Identities = 90/229 (39%), Positives = 138/229 (60%), Gaps = 4/229 (1%)
Frame = -1
Query: 685 DTVLNQDRVIEFLLNNQHDPVLVLKYFKWAEKQRGFVRGV-DALCITLHILVNSR-NVWD 512
D + V++ LL+++ DP ++F+ A QRGF+ D + LHILVNS +
Sbjct: 69 DGKFTKTHVVDVLLSHRDDPDSAYRHFQTARLQRGFLHSKSDPFFVLLHILVNSAMHQHK 128
Query: 511 ARKLLNQCLSGDSSPCATILVDRLMETSKRCG--LNPLLFSYVLNSYVRAGRIEDAAECF 338
AR+LL+ S DS P ATI+ + L++ K LNP +F+++++S V+A R+ DA +CF
Sbjct: 129 ARRLLDYYASSDSGPSATIIFNGLVKCGKTFDFELNPKIFNFLISSCVKANRLNDAIDCF 188
Query: 337 DRMIKYDIVPGISYRNILLNALVRANMIGKARDLYKGMLERGVGCDCFTLDIMMHACLKE 158
+ M+++DI+ I N LL LVR +M+G A DLY ++ RG DC T+ I+M ACL+E
Sbjct: 189 NGMLEHDIMLWIPIMNRLLKELVRQDMVGVAGDLYTDIVSRGTHYDCRTVHILMAACLRE 248
Query: 157 GKPEEAEKYFREMKTRVFEFDPVTYNTVILAVCKKPDSKTALELLKEMK 11
G+ +EA K E K +FD Y+ + CK+ + AL+LL+EMK
Sbjct: 249 GRIKEAVKLLEEAKMSGIKFDAGLYSCWVYVACKEQNLSLALKLLEEMK 297
Score = 60.1 bits (144), Expect = 1e-06
Identities = 34/139 (24%), Positives = 69/139 (49%)
Frame = -1
Query: 430 SKRCGLNPLLFSYVLNSYVRAGRIEDAAECFDRMIKYDIVPGISYRNILLNALVRANMIG 251
+K L+ + ++ +++ + + ++ A+E FD +++ I P + N +++ N +
Sbjct: 648 NKEIKLDVIAYAVLIDGFCKRRDMKSASELFDEILQVGISPNLFVYNSMMSGFRNVNNME 707
Query: 250 KARDLYKGMLERGVGCDCFTLDIMMHACLKEGKPEEAEKYFREMKTRVFEFDPVTYNTVI 71
A L M+ GV CD T ++ LK+GK + A F EM + D +TY ++
Sbjct: 708 AALVLRDKMINEGVPCDLETYTTLIDGLLKDGKIDLASDLFTEMLGKGIMPDDITYTVLV 767
Query: 70 LAVCKKPDSKTALELLKEM 14
+ K + A ++L+EM
Sbjct: 768 HGLSNKGQVENAHKVLEEM 786
Score = 59.7 bits (143), Expect = 2e-06
Identities = 39/138 (28%), Positives = 71/138 (51%), Gaps = 1/138 (0%)
Frame = -1
Query: 412 NPLLFSYVLNSYVRAGRIEDAAECFDRMIKYDIVPGI-SYRNILLNALVRANMIGKARDL 236
N +++ ++ + G+++ A +D+M+ I+P I SY NI+L NM KA DL
Sbjct: 443 NVFVYNSIIAWSCKKGQMDKAQNTWDKMVANGILPTITSYNNIILGNCRNGNM-DKALDL 501
Query: 235 YKGMLERGVGCDCFTLDIMMHACLKEGKPEEAEKYFREMKTRVFEFDPVTYNTVILAVCK 56
+ + ER + + T I++ ++G ++AE F +M + T+NTVI + K
Sbjct: 502 FSQLPERHLKANVVTYSILIDGYFRKGDADKAENMFDQMVSSGISPTDYTFNTVISGMSK 561
Query: 55 KPDSKTALELLKEMKNMG 2
+ A +LLK++ G
Sbjct: 562 VGKTSEAKDLLKKIVEGG 579
Score = 59.3 bits (142), Expect = 2e-06
Identities = 41/156 (26%), Positives = 74/156 (47%), Gaps = 2/156 (1%)
Frame = -1
Query: 463 ATILVDRLMETSKRCGLNPLLFSY--VLNSYVRAGRIEDAAECFDRMIKYDIVPGISYRN 290
A+ L D +++ G++P LF Y +++ + +E A D+MI + +
Sbjct: 674 ASELFDEILQV----GISPNLFVYNSMMSGFRNVNNMEAALVLRDKMINEGVPCDLETYT 729
Query: 289 ILLNALVRANMIGKARDLYKGMLERGVGCDCFTLDIMMHACLKEGKPEEAEKYFREMKTR 110
L++ L++ I A DL+ ML +G+ D T +++H +G+ E A K EM +
Sbjct: 730 TLIDGLLKDGKIDLASDLFTEMLGKGIMPDDITYTVLVHGLSNKGQVENAHKVLEEMCKK 789
Query: 109 VFEFDPVTYNTVILAVCKKPDSKTALELLKEMKNMG 2
+ YNT+I K+ + + A L EM + G
Sbjct: 790 SMTPSVLIYNTLIAGYFKEGNLQEAFRLHDEMLDKG 825
Score = 58.2 bits (139), Expect = 6e-06
Identities = 33/142 (23%), Positives = 68/142 (47%), Gaps = 3/142 (2%)
Frame = -1
Query: 418 GLNPL--LFSYVLNSYVRAGRIEDAAECFDRMIKY-DIVPGISYRNILLNALVRANMIGK 248
G++P F+ V++ + G+ +A + ++++ D++P N L++ ++ +
Sbjct: 544 GISPTDYTFNTVISGMSKVGKTSEAKDLLKKIVEGGDLIPTCMSYNSLIDGFLKEGDVSS 603
Query: 247 ARDLYKGMLERGVGCDCFTLDIMMHACLKEGKPEEAEKYFREMKTRVFEFDPVTYNTVIL 68
A +Y+ M G+ D T ++ K A K +EM+ + + D + Y +I
Sbjct: 604 ALAVYREMCNSGISPDVVTYTTLIDGLCKSNNINLALKLLKEMRNKEIKLDVIAYAVLID 663
Query: 67 AVCKKPDSKTALELLKEMKNMG 2
CK+ D K+A EL E+ +G
Sbjct: 664 GFCKRRDMKSASELFDEILQVG 685
>ref|XP_006293664.1| hypothetical protein CARUB_v10022620mg [Capsella rubella]
gi|482562372|gb|EOA26562.1| hypothetical protein
CARUB_v10022620mg [Capsella rubella]
Length = 861
Score = 147 bits (370), Expect = 9e-33
Identities = 84/238 (35%), Positives = 143/238 (60%), Gaps = 7/238 (2%)
Frame = -1
Query: 703 ISSQDTDTVLNQD----RVIEFLLNNQHDPVLVLKYFKWAEKQRGFVRGVDALCITLHIL 536
IS+ D++ D RVIE LL ++DPV L+Y W + G D + +HIL
Sbjct: 70 ISTLDSENQGGDDVDDARVIEVLLGRRNDPVSALQYCNWVKPLPHLYEGGDVFWVLVHIL 129
Query: 535 VNSRNVWD-ARKLLNQCLSGDSSPCATILVDRLMETSKRCG--LNPLLFSYVLNSYVRAG 365
+S + D A LL +S + + +++V+ L+E+++R G L+ F+Y+LN+Y+R
Sbjct: 130 FSSPHTHDRASNLLVMFVSSNPTLIPSVIVNYLVESAERYGFELSSRAFNYLLNAYIRNR 189
Query: 364 RIEDAAECFDRMIKYDIVPGISYRNILLNALVRANMIGKARDLYKGMLERGVGCDCFTLD 185
R++ A +CF+ M++ +++P + Y N +L++LVR+N+I +A+++Y M+ GV D T
Sbjct: 190 RMDYAVDCFNLMVERNVIPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQ 249
Query: 184 IMMHACLKEGKPEEAEKYFREMKTRVFEFDPVTYNTVILAVCKKPDSKTALELLKEMK 11
++M A L+E EEA K FR + +R E D + Y+ + A CK PD A++LL+EM+
Sbjct: 250 LLMRASLRERNSEEAVKIFRRVMSRGAEPDGLLYSLAVQAACKMPDLVLAMDLLREMR 307
Score = 62.4 bits (150), Expect = 3e-07
Identities = 37/143 (25%), Positives = 66/143 (46%)
Frame = -1
Query: 430 SKRCGLNPLLFSYVLNSYVRAGRIEDAAECFDRMIKYDIVPGISYRNILLNALVRANMIG 251
SK L+ + +++ + + ++ A F +++ + P +S N L++ +
Sbjct: 659 SKDLKLDIPAYGALIDGFCKKHDMKTAYTLFSELLEQGLRPNVSVYNSLISGFRNLGKMD 718
Query: 250 KARDLYKGMLERGVGCDCFTLDIMMHACLKEGKPEEAEKYFREMKTRVFEFDPVTYNTVI 71
A DLYK M+ G+ CD FT M+ LKEG A + E+ D + Y ++
Sbjct: 719 AATDLYKKMVNDGISCDLFTFTTMIDGLLKEGNLIVASDLYSELLALGIVPDEILYMVLV 778
Query: 70 LAVCKKPDSKTALELLKEMKNMG 2
+ KK A ++L+EMK G
Sbjct: 779 NGLSKKGQFVRASKMLEEMKKKG 801
Score = 58.5 bits (140), Expect = 4e-06
Identities = 38/153 (24%), Positives = 70/153 (45%), Gaps = 2/153 (1%)
Frame = -1
Query: 469 PCATILVDRLMETSKRCGLNPLLFSY--VLNSYVRAGRIEDAAECFDRMIKYDIVPGISY 296
P + +D L E + G+ +Y V+ + V+ G++E+A D M+ + I +
Sbjct: 294 PDLVLAMDLLREMRGKLGVPASQETYTSVIVACVKQGKMEEAVRVKDEMVGFGIPMSLIA 353
Query: 295 RNILLNALVRANMIGKARDLYKGMLERGVGCDCFTLDIMMHACLKEGKPEEAEKYFREMK 116
L+N + N +GKA D + M E G+ D +M+ K G+ E + ++ MK
Sbjct: 354 ATSLINGYCKGNKLGKALDFFNRMEEEGLAPDKVMFSVMIEWFCKNGEMENTVEIYKRMK 413
Query: 115 TRVFEFDPVTYNTVILAVCKKPDSKTALELLKE 17
+ V +T+I A K + AL++ +
Sbjct: 414 SVGISPSSVLVHTMIQAFLKAESPEAALDIFND 446
Score = 57.4 bits (137), Expect = 9e-06
Identities = 45/172 (26%), Positives = 76/172 (44%), Gaps = 2/172 (1%)
Frame = -1
Query: 511 ARKLLNQCLSGDSSPCATILVDRLMETSKRCGLNP--LLFSYVLNSYVRAGRIEDAAECF 338
A L+N G+ A +R+ E GL P ++FS ++ + + G +E+ E +
Sbjct: 354 ATSLINGYCKGNKLGKALDFFNRMEEE----GLAPDKVMFSVMIEWFCKNGEMENTVEIY 409
Query: 337 DRMIKYDIVPGISYRNILLNALVRANMIGKARDLYKGMLERGVGCDCFTLDIMMHACLKE 158
RM I P + ++ A ++A A D++ E I + C K+
Sbjct: 410 KRMKSVGISPSSVLVHTMIQAFLKAESPEAALDIFNDSFETWTAHGFMCNKIFLLLC-KQ 468
Query: 157 GKPEEAEKYFREMKTRVFEFDPVTYNTVILAVCKKPDSKTALELLKEMKNMG 2
GK + A + R M+ + E + V YN +ILA C+K + A + EM G
Sbjct: 469 GKVDAATSFLRMMENKGIEPNVVFYNNLILAHCRKKNMDLARSIFLEMLENG 520