BLASTX nr result

ID: Akebia26_contig00030359 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia26_contig00030359
         (264 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267664.2| PREDICTED: DNA-directed RNA polymerase III s...    86   5e-15
emb|CBI22720.3| unnamed protein product [Vitis vinifera]               86   5e-15
emb|CAN62168.1| hypothetical protein VITISV_005985 [Vitis vinifera]    84   2e-14
ref|XP_007038705.1| RNA polymerase III subunit RPC82 family prot...    84   3e-14
ref|XP_007038704.1| RNA polymerase III subunit RPC82 family prot...    84   3e-14
emb|CAN75989.1| hypothetical protein VITISV_012194 [Vitis vinifera]    74   2e-11
emb|CBI26210.3| unnamed protein product [Vitis vinifera]               73   4e-11
ref|XP_006490401.1| PREDICTED: DNA-directed RNA polymerase III s...    72   8e-11
ref|XP_006490400.1| PREDICTED: DNA-directed RNA polymerase III s...    72   8e-11
ref|XP_006421933.1| hypothetical protein CICLE_v10004721mg [Citr...    72   8e-11
ref|XP_006421932.1| hypothetical protein CICLE_v10004721mg [Citr...    72   8e-11
ref|XP_006421931.1| hypothetical protein CICLE_v10004721mg [Citr...    72   8e-11
ref|XP_006374620.1| hypothetical protein POPTR_0015s13040g [Popu...    71   1e-10
ref|XP_002321920.2| RNA polymerase 3 subunit RPC82 family protei...    71   1e-10
gb|EMT11946.1| hypothetical protein F775_30464 [Aegilops tauschii]     71   1e-10
emb|CBH32599.1| RNA polymerase III subunit RPC82 domain containi...    71   1e-10
ref|XP_006363319.1| PREDICTED: DNA-directed RNA polymerase III s...    69   7e-10
gb|EXC19135.1| DNA-directed RNA polymerase III subunit RPC3 [Mor...    69   9e-10
ref|XP_004240730.1| PREDICTED: DNA-directed RNA polymerase III s...    69   9e-10
ref|XP_007219003.1| hypothetical protein PRUPE_ppa004195mg [Prun...    68   1e-09

>ref|XP_002267664.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC3 [Vitis
           vinifera]
          Length = 511

 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 40/59 (67%), Positives = 49/59 (83%)
 Frame = -3

Query: 181 VSCNLSCLI*KVCECLLRKGTLTLTEISRYTEIPSQQVKNYLLVLIQHNCVQAFAIQQE 5
           +S +   L+ KVC+CLLRKGTLTL  + R+TE+P QQVK+ +LVLIQHNCVQAFAIQQE
Sbjct: 14  ISSHFGNLVAKVCDCLLRKGTLTLASVIRFTELPPQQVKSCILVLIQHNCVQAFAIQQE 72


>emb|CBI22720.3| unnamed protein product [Vitis vinifera]
          Length = 524

 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 40/59 (67%), Positives = 49/59 (83%)
 Frame = -3

Query: 181 VSCNLSCLI*KVCECLLRKGTLTLTEISRYTEIPSQQVKNYLLVLIQHNCVQAFAIQQE 5
           +S +   L+ KVC+CLLRKGTLTL  + R+TE+P QQVK+ +LVLIQHNCVQAFAIQQE
Sbjct: 14  ISSHFGNLVAKVCDCLLRKGTLTLASVIRFTELPPQQVKSCILVLIQHNCVQAFAIQQE 72


>emb|CAN62168.1| hypothetical protein VITISV_005985 [Vitis vinifera]
          Length = 721

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 39/59 (66%), Positives = 48/59 (81%)
 Frame = -3

Query: 181 VSCNLSCLI*KVCECLLRKGTLTLTEISRYTEIPSQQVKNYLLVLIQHNCVQAFAIQQE 5
           +S +   L+ KVC+CLLRKGT TL  + R+TE+P QQVK+ +LVLIQHNCVQAFAIQQE
Sbjct: 14  ISSHFGNLVAKVCDCLLRKGTXTLASVIRFTELPPQQVKSCILVLIQHNCVQAFAIQQE 72


>ref|XP_007038705.1| RNA polymerase III subunit RPC82 family protein, putative isoform 2
           [Theobroma cacao] gi|508775950|gb|EOY23206.1| RNA
           polymerase III subunit RPC82 family protein, putative
           isoform 2 [Theobroma cacao]
          Length = 463

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 41/71 (57%), Positives = 52/71 (73%)
 Frame = -3

Query: 214 TINSILFAFIYVSCNLSCLI*KVCECLLRKGTLTLTEISRYTEIPSQQVKNYLLVLIQHN 35
           T + I +A + ++ +   L+ KVCECLLRKG LTL  I R+TE+ S QVKN LLVLIQHN
Sbjct: 3   TQHGIKYAVLLITTHFGDLVAKVCECLLRKGPLTLQAIVRFTELTSSQVKNSLLVLIQHN 62

Query: 34  CVQAFAIQQEG 2
           CVQAF ++Q G
Sbjct: 63  CVQAFILEQPG 73


>ref|XP_007038704.1| RNA polymerase III subunit RPC82 family protein, putative isoform 1
           [Theobroma cacao] gi|508775949|gb|EOY23205.1| RNA
           polymerase III subunit RPC82 family protein, putative
           isoform 1 [Theobroma cacao]
          Length = 523

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 41/71 (57%), Positives = 52/71 (73%)
 Frame = -3

Query: 214 TINSILFAFIYVSCNLSCLI*KVCECLLRKGTLTLTEISRYTEIPSQQVKNYLLVLIQHN 35
           T + I +A + ++ +   L+ KVCECLLRKG LTL  I R+TE+ S QVKN LLVLIQHN
Sbjct: 3   TQHGIKYAVLLITTHFGDLVAKVCECLLRKGPLTLQAIVRFTELTSSQVKNSLLVLIQHN 62

Query: 34  CVQAFAIQQEG 2
           CVQAF ++Q G
Sbjct: 63  CVQAFILEQPG 73


>emb|CAN75989.1| hypothetical protein VITISV_012194 [Vitis vinifera]
          Length = 549

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 34/50 (68%), Positives = 41/50 (82%)
 Frame = -3

Query: 151 KVCECLLRKGTLTLTEISRYTEIPSQQVKNYLLVLIQHNCVQAFAIQQEG 2
           KVC+CL+RKGTL L +I R T++  QQVK YL VLIQHNCVQAFA++ EG
Sbjct: 24  KVCDCLIRKGTLALDDIVRTTKLSPQQVKTYLKVLIQHNCVQAFAMEHEG 73


>emb|CBI26210.3| unnamed protein product [Vitis vinifera]
          Length = 517

 Score = 73.2 bits (178), Expect = 4e-11
 Identities = 34/50 (68%), Positives = 40/50 (80%)
 Frame = -3

Query: 151 KVCECLLRKGTLTLTEISRYTEIPSQQVKNYLLVLIQHNCVQAFAIQQEG 2
           KVC+CLLRKGTL L +I R  ++  QQVK YL VLIQHNCVQAFA++ EG
Sbjct: 24  KVCDCLLRKGTLALDDIVRTAKLSPQQVKTYLKVLIQHNCVQAFAMEHEG 73


>ref|XP_006490401.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like
           isoform X3 [Citrus sinensis]
          Length = 444

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 34/51 (66%), Positives = 39/51 (76%)
 Frame = -3

Query: 160 LI*KVCECLLRKGTLTLTEISRYTEIPSQQVKNYLLVLIQHNCVQAFAIQQ 8
           L+ KVCECLLRKG LT   + RYTE+  +QVKN LLVLIQ NCVQAF  +Q
Sbjct: 21  LVAKVCECLLRKGPLTRQNVKRYTELSDEQVKNALLVLIQQNCVQAFTTEQ 71


>ref|XP_006490400.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like
           isoform X2 [Citrus sinensis]
          Length = 512

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 34/51 (66%), Positives = 39/51 (76%)
 Frame = -3

Query: 160 LI*KVCECLLRKGTLTLTEISRYTEIPSQQVKNYLLVLIQHNCVQAFAIQQ 8
           L+ KVCECLLRKG LT   + RYTE+  +QVKN LLVLIQ NCVQAF  +Q
Sbjct: 21  LVAKVCECLLRKGPLTRQNVKRYTELSDEQVKNALLVLIQQNCVQAFTTEQ 71


>ref|XP_006421933.1| hypothetical protein CICLE_v10004721mg [Citrus clementina]
           gi|568874593|ref|XP_006490399.1| PREDICTED: DNA-directed
           RNA polymerase III subunit RPC3-like isoform X1 [Citrus
           sinensis] gi|557523806|gb|ESR35173.1| hypothetical
           protein CICLE_v10004721mg [Citrus clementina]
          Length = 527

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 34/51 (66%), Positives = 39/51 (76%)
 Frame = -3

Query: 160 LI*KVCECLLRKGTLTLTEISRYTEIPSQQVKNYLLVLIQHNCVQAFAIQQ 8
           L+ KVCECLLRKG LT   + RYTE+  +QVKN LLVLIQ NCVQAF  +Q
Sbjct: 21  LVAKVCECLLRKGPLTRQNVKRYTELSDEQVKNALLVLIQQNCVQAFTTEQ 71


>ref|XP_006421932.1| hypothetical protein CICLE_v10004721mg [Citrus clementina]
           gi|557523805|gb|ESR35172.1| hypothetical protein
           CICLE_v10004721mg [Citrus clementina]
          Length = 433

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 34/51 (66%), Positives = 39/51 (76%)
 Frame = -3

Query: 160 LI*KVCECLLRKGTLTLTEISRYTEIPSQQVKNYLLVLIQHNCVQAFAIQQ 8
           L+ KVCECLLRKG LT   + RYTE+  +QVKN LLVLIQ NCVQAF  +Q
Sbjct: 21  LVAKVCECLLRKGPLTRQNVKRYTELSDEQVKNALLVLIQQNCVQAFTTEQ 71


>ref|XP_006421931.1| hypothetical protein CICLE_v10004721mg [Citrus clementina]
           gi|557523804|gb|ESR35171.1| hypothetical protein
           CICLE_v10004721mg [Citrus clementina]
          Length = 322

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 34/51 (66%), Positives = 39/51 (76%)
 Frame = -3

Query: 160 LI*KVCECLLRKGTLTLTEISRYTEIPSQQVKNYLLVLIQHNCVQAFAIQQ 8
           L+ KVCECLLRKG LT   + RYTE+  +QVKN LLVLIQ NCVQAF  +Q
Sbjct: 21  LVAKVCECLLRKGPLTRQNVKRYTELSDEQVKNALLVLIQQNCVQAFTTEQ 71


>ref|XP_006374620.1| hypothetical protein POPTR_0015s13040g [Populus trichocarpa]
           gi|550322613|gb|ERP52417.1| hypothetical protein
           POPTR_0015s13040g [Populus trichocarpa]
          Length = 437

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 34/67 (50%), Positives = 47/67 (70%)
 Frame = -3

Query: 202 ILFAFIYVSCNLSCLI*KVCECLLRKGTLTLTEISRYTEIPSQQVKNYLLVLIQHNCVQA 23
           I +A   ++ +   L+ KVC+CLL+KG L L EI RYTE+    V+N LLVLIQHNC+Q 
Sbjct: 7   IKYAVHIITNHFGPLVAKVCDCLLKKGPLPLREIVRYTELSETLVRNCLLVLIQHNCLQP 66

Query: 22  FAIQQEG 2
           F +++EG
Sbjct: 67  FLLEEEG 73


>ref|XP_002321920.2| RNA polymerase 3 subunit RPC82 family protein [Populus trichocarpa]
           gi|550322612|gb|EEF06047.2| RNA polymerase 3 subunit
           RPC82 family protein [Populus trichocarpa]
          Length = 520

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 34/67 (50%), Positives = 47/67 (70%)
 Frame = -3

Query: 202 ILFAFIYVSCNLSCLI*KVCECLLRKGTLTLTEISRYTEIPSQQVKNYLLVLIQHNCVQA 23
           I +A   ++ +   L+ KVC+CLL+KG L L EI RYTE+    V+N LLVLIQHNC+Q 
Sbjct: 7   IKYAVHIITNHFGPLVAKVCDCLLKKGPLPLREIVRYTELSETLVRNCLLVLIQHNCLQP 66

Query: 22  FAIQQEG 2
           F +++EG
Sbjct: 67  FLLEEEG 73


>gb|EMT11946.1| hypothetical protein F775_30464 [Aegilops tauschii]
          Length = 562

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 37/64 (57%), Positives = 45/64 (70%)
 Frame = -3

Query: 208 NSILFAFIYVSCNLSCLI*KVCECLLRKGTLTLTEISRYTEIPSQQVKNYLLVLIQHNCV 29
           + IL A   +S +   L+ KVC+CLLR G L LTEI R  ++P  QVKN LLVLIQHNCV
Sbjct: 5   HGILLAAGLISDHFGPLVAKVCDCLLRHGALQLTEIVRRLKLPQGQVKNSLLVLIQHNCV 64

Query: 28  QAFA 17
           QAF+
Sbjct: 65  QAFS 68


>emb|CBH32599.1| RNA polymerase III subunit RPC82 domain containing protein,
           expressed [Triticum aestivum]
          Length = 502

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 37/64 (57%), Positives = 45/64 (70%)
 Frame = -3

Query: 208 NSILFAFIYVSCNLSCLI*KVCECLLRKGTLTLTEISRYTEIPSQQVKNYLLVLIQHNCV 29
           + IL A   +S +   L+ KVC+CLLR G L LTEI R  ++P  QVKN LLVLIQHNCV
Sbjct: 5   HGILLAAGLISDHFGPLVAKVCDCLLRHGALQLTEIVRRLKLPQGQVKNSLLVLIQHNCV 64

Query: 28  QAFA 17
           QAF+
Sbjct: 65  QAFS 68


>ref|XP_006363319.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc3-like
           [Solanum tuberosum]
          Length = 525

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 36/69 (52%), Positives = 44/69 (63%)
 Frame = -3

Query: 208 NSILFAFIYVSCNLSCLI*KVCECLLRKGTLTLTEISRYTEIPSQQVKNYLLVLIQHNCV 29
           + I  A   +S     L  KVC+CLLR+GT TL ++   TE+    VKN LLVLI HNCV
Sbjct: 5   HGIKLAVYLISSYFGDLNAKVCDCLLRRGTQTLYQVVSSTELTRTNVKNCLLVLIHHNCV 64

Query: 28  QAFAIQQEG 2
           QAFA+QQ G
Sbjct: 65  QAFALQQPG 73


>gb|EXC19135.1| DNA-directed RNA polymerase III subunit RPC3 [Morus notabilis]
          Length = 564

 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 34/67 (50%), Positives = 46/67 (68%)
 Frame = -3

Query: 202 ILFAFIYVSCNLSCLI*KVCECLLRKGTLTLTEISRYTEIPSQQVKNYLLVLIQHNCVQA 23
           I FA   ++ +   L+  VCE LLRKG LTL ++ R+TE+   Q+KN LL+LIQHNCVQ 
Sbjct: 7   IKFAVHLITSHFGNLVANVCENLLRKGPLTLQQLIRFTELTPLQIKNSLLILIQHNCVQP 66

Query: 22  FAIQQEG 2
           F+ +Q G
Sbjct: 67  FSSEQIG 73


>ref|XP_004240730.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc3-like
           [Solanum lycopersicum]
          Length = 525

 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 36/69 (52%), Positives = 45/69 (65%)
 Frame = -3

Query: 208 NSILFAFIYVSCNLSCLI*KVCECLLRKGTLTLTEISRYTEIPSQQVKNYLLVLIQHNCV 29
           + I  A   +S     L  KVC+CLLR+GT TL ++   TE+  + VKN LLVLI HNCV
Sbjct: 5   HGIKLAVYLISSYFGELNAKVCDCLLRRGTQTLHQVVSSTELSRKNVKNCLLVLIHHNCV 64

Query: 28  QAFAIQQEG 2
           QAFAI+Q G
Sbjct: 65  QAFAIRQPG 73


>ref|XP_007219003.1| hypothetical protein PRUPE_ppa004195mg [Prunus persica]
           gi|462415465|gb|EMJ20202.1| hypothetical protein
           PRUPE_ppa004195mg [Prunus persica]
          Length = 524

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 33/65 (50%), Positives = 45/65 (69%)
 Frame = -3

Query: 202 ILFAFIYVSCNLSCLI*KVCECLLRKGTLTLTEISRYTEIPSQQVKNYLLVLIQHNCVQA 23
           I +A   ++ N   L+ KVCE LLR+G L+L ++  +TE+  QQVKN LL+LIQHNCVQ 
Sbjct: 8   IKYAVHIITSNFGNLVAKVCEILLRRGHLSLKQLIGFTELTPQQVKNSLLILIQHNCVQP 67

Query: 22  FAIQQ 8
           F+  Q
Sbjct: 68  FSFDQ 72


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