BLASTX nr result
ID: Akebia26_contig00029187
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia26_contig00029187
(1998 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera] 177 2e-83
emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera] 161 8e-79
emb|CAN76029.1| hypothetical protein VITISV_016069 [Vitis vinifera] 182 1e-77
emb|CAN63175.1| hypothetical protein VITISV_027195 [Vitis vinifera] 195 7e-74
emb|CAN76565.1| hypothetical protein VITISV_010942 [Vitis vinifera] 130 3e-73
gb|ABA93790.1| retrotransposon protein, putative, Ty1-copia subc... 147 8e-70
emb|CAN66710.1| hypothetical protein VITISV_006397 [Vitis vinifera] 174 9e-70
emb|CAN69855.1| hypothetical protein VITISV_041230 [Vitis vinifera] 171 3e-69
gb|ABA99134.1| retrotransposon protein, putative, Ty1-copia subc... 148 6e-69
gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris] 158 3e-68
gb|AAT58810.1| putative polyprotein [Oryza sativa Japonica Group] 153 3e-65
gb|AAT38001.1| Putative polyprotein [Oryza sativa Japonica Group] 153 3e-65
gb|ABA92101.2| retrotransposon protein, putative, Ty1-copia subc... 154 5e-65
gb|AAT44162.1| putative polyprotein [Oryza sativa Japonica Group] 153 1e-64
gb|AAM00978.1|AC090482_7 Putative retrovirus-related pol polypro... 147 2e-64
emb|CAE04541.2| OSJNBa0040D17.9 [Oryza sativa Japonica Group] 153 3e-64
gb|AAT93941.1| putative polyprotein [Oryza sativa Japonica Group] 153 4e-64
gb|AAL75486.1|AF466202_12 putative Fourf gag/pol protein [Zea mays] 160 4e-64
gb|ABF98943.1| retrotransposon protein, putative, unclassified, ... 152 6e-64
gb|AAT77367.1| putative polyprotein [Oryza sativa Japonica Group... 153 6e-64
>emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]
Length = 1277
Score = 177 bits (449), Expect(4) = 2e-83
Identities = 92/165 (55%), Positives = 118/165 (71%)
Frame = +2
Query: 773 FRNEPQSFKEAMFTPKALFWKEVVNNELEPIMQNHT*ELVSLPPGNIPIGCKWIFKRKMK 952
F EPQ+FKEA+ + + L WKE + +E++ I+QNHT ELV LP G P+ KWIFKRKMK
Sbjct: 761 FPCEPQTFKEAVNSTEGLMWKEAIKSEIDSILQNHTWELVBLPLGCKPLSSKWIFKRKMK 820
Query: 953 SDDFIDKYKARLVAKGFKQKKCLDYFDMYSPITRITSIRMLIEIVALYKFEINQIDVKTI 1132
D IDKYKARLV KG++Q + LDYFD YSP+TRI SIRM++ I AL EI+Q+DVKT
Sbjct: 821 VDGSIDKYKARLVIKGYRQTEGLDYFDTYSPVTRINSIRMVLAIAALRNLEIHQMDVKTA 880
Query: 1133 FLNDELNEKIYIEQPERFIVK**EKKVSFCQIILWLKASAQSMTQ 1267
FLN +L+E+IY+EQPE F EKKV C+++ L Q+ Q
Sbjct: 881 FLNGDLDEEIYMEQPEGFSAPGQEKKV--CKLVKSLYGLKQAPKQ 923
Score = 110 bits (274), Expect(4) = 2e-83
Identities = 55/113 (48%), Positives = 77/113 (68%)
Frame = +1
Query: 1375 CFYLDDMFIMGTSKNIIKSAKKMLTSNFDIKDLGVTDVILGIKVTRTLDGLVLSQLHYIE 1554
C Y+DDM I+G+ +I S K ML S FD+KD+G+ DVILGIK+ RT + L+LSQ HY++
Sbjct: 959 CLYVDDMLIVGSDDKMITSTKNMLNSRFDMKDMGLADVILGIKIKRTSBELILSQSHYVD 1018
Query: 1555 KMLKTFNKFDISSTKIPFDYHNHNLKKSIGRRISHLEYS*IIGSLMYVINYDR 1713
K+L F+K + + P D H L K+ G +S +EYS IIGSLMY+++ R
Sbjct: 1019 KILGKFDKDNSGVARTPVDVTLH-LSKNKGESVSQVEYSRIIGSLMYLMSCTR 1070
Score = 49.3 bits (116), Expect(4) = 2e-83
Identities = 25/48 (52%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Frame = +3
Query: 1713 DIIYLIEKLSRNTSNLRVTHWEVLVKVLK--RCILDYRLHYTRYQLYL 1850
DI Y + KLSR TSN HW+ +++VLK R DY LHYTRY L
Sbjct: 1072 DIAYAVSKLSRYTSNPGAKHWQGIIRVLKYLRFTRDYGLHYTRYPAVL 1119
Score = 44.3 bits (103), Expect(4) = 2e-83
Identities = 23/38 (60%), Positives = 27/38 (71%)
Frame = +2
Query: 1883 TFGGAVIL*KSSK*TCIAQSTIES*FINLDKASEEAKW 1996
T GGA + KSSK IA+ST+ES FI LDK EEA+W
Sbjct: 1143 TLGGAAVSWKSSKQXVIARSTMESEFIALDKCGEEAEW 1180
Score = 70.1 bits (170), Expect = 4e-09
Identities = 30/59 (50%), Positives = 39/59 (66%)
Frame = +3
Query: 1185 SSSNDRKRKCHFVKLFYGLKQVPNQ*HKKFDNVMIKNGLKIDECDKCVYYKNKNKNLIM 1361
S+ K+ C VK YGLKQ P Q H+KFDNVM+ +G KI+ECDKCVY K+ ++
Sbjct: 899 SAPGQEKKVCKLVKSLYGLKQAPKQWHEKFDNVMLSHGFKINECDKCVYVKDTEHGYVI 957
>emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]
Length = 1316
Score = 161 bits (407), Expect(4) = 8e-79
Identities = 88/170 (51%), Positives = 114/170 (67%), Gaps = 2/170 (1%)
Frame = +2
Query: 764 FLSF--RNEPQSFKEAMFTPKALFWKEVVNNELEPIMQNHT*ELVSLPPGNIPIGCKWIF 937
FL+F EPQ+FKEA+ + + L WKE + +E++ I+QNHT ELV LPPG P+ KWIF
Sbjct: 805 FLTFMLEGEPQTFKEAVNSTEGLMWKEAIKSEIDSILQNHTWELVDLPPGCKPLSSKWIF 864
Query: 938 KRKMKSDDFIDKYKARLVAKGFKQKKCLDYFDMYSPITRITSIRMLIEIVALYKFEINQI 1117
KRKMK D IDKYKARLV KG++Q + LDYFD YSP+TRI SIRM++ I AL EI+Q+
Sbjct: 865 KRKMKVDGSIDKYKARLVIKGYRQTEGLDYFDTYSPVTRINSIRMVLAIAALRNLEIHQM 924
Query: 1118 DVKTIFLNDELNEKIYIEQPERFIVK**EKKVSFCQIILWLKASAQSMTQ 1267
D+K +IY+EQPE F EKKV C+++ L Q+ Q
Sbjct: 925 DMK----------EIYMEQPEGFSAPGQEKKV--CKLVKSLYGLKQAPKQ 962
Score = 108 bits (271), Expect(4) = 8e-79
Identities = 55/113 (48%), Positives = 77/113 (68%)
Frame = +1
Query: 1375 CFYLDDMFIMGTSKNIIKSAKKMLTSNFDIKDLGVTDVILGIKVTRTLDGLVLSQLHYIE 1554
C Y+DDM I+G+ +I S K ML S FD+KD+G+ DVILGIK+ RT + L+LSQ HY++
Sbjct: 998 CLYVDDMLIVGSDDKMITSTKNMLNSRFDMKDMGLADVILGIKIKRTSNELILSQSHYVD 1057
Query: 1555 KMLKTFNKFDISSTKIPFDYHNHNLKKSIGRRISHLEYS*IIGSLMYVINYDR 1713
K+L F+K + + P D H L K+ G +S +EYS IIGSLMY+++ R
Sbjct: 1058 KILGKFDKDNSGVARTPVDVTLH-LSKNKGESVSQVEYSRIIGSLMYLMSCTR 1109
Score = 48.9 bits (115), Expect(4) = 8e-79
Identities = 25/48 (52%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Frame = +3
Query: 1713 DIIYLIEKLSRNTSNLRVTHWEVLVKVLK--RCILDYRLHYTRYQLYL 1850
DI Y + KLSR TSN HW+ +++VLK R DY LHYTRY L
Sbjct: 1111 DIAYAVGKLSRYTSNPGAKHWQGIIRVLKYLRFTRDYXLHYTRYPAVL 1158
Score = 46.6 bits (109), Expect(4) = 8e-79
Identities = 24/38 (63%), Positives = 28/38 (73%)
Frame = +2
Query: 1883 TFGGAVIL*KSSK*TCIAQSTIES*FINLDKASEEAKW 1996
T GGA + KSSK T IA+ST+ES FI LDK EEA+W
Sbjct: 1182 TLGGAAVSWKSSKQTVIARSTMESEFIALDKCGEEAEW 1219
Score = 70.9 bits (172), Expect = 2e-09
Identities = 32/71 (45%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Frame = +3
Query: 1152 MRKFTLSNQKGSSSNDRKRK-CHFVKLFYGLKQVPNQ*HKKFDNVMIKNGLKIDECDKCV 1328
M++ + +G S+ +++K C VK YGLKQ P Q H+KFDNVM+ +G KI+ECDKCV
Sbjct: 926 MKEIYMEQPEGFSAPGQEKKVCKLVKSLYGLKQAPKQWHEKFDNVMLSHGFKINECDKCV 985
Query: 1329 YYKNKNKNLIM 1361
Y K+ ++
Sbjct: 986 YVKDTEHGYVI 996
>emb|CAN76029.1| hypothetical protein VITISV_016069 [Vitis vinifera]
Length = 1096
Score = 182 bits (462), Expect(4) = 1e-77
Identities = 95/170 (55%), Positives = 122/170 (71%), Gaps = 2/170 (1%)
Frame = +2
Query: 764 FLSF--RNEPQSFKEAMFTPKALFWKEVVNNELEPIMQNHT*ELVSLPPGNIPIGCKWIF 937
FL+F EPQ+FKEA+ + + L WKE + +E++ I+QNHT ELV LPPG P+ KWIF
Sbjct: 588 FLTFMLEGEPQTFKEAVNSTEGLMWKEAIKSEIDSILQNHTWELVDLPPGCKPLSSKWIF 647
Query: 938 KRKMKSDDFIDKYKARLVAKGFKQKKCLDYFDMYSPITRITSIRMLIEIVALYKFEINQI 1117
KRKMK D IDKYKARLV KG++Q + LDYFD YSP+TRI SIRM++ I AL EI+Q+
Sbjct: 648 KRKMKVDGSIDKYKARLVIKGYRQTEGLDYFDTYSPVTRINSIRMVLAIAALRNLEIHQM 707
Query: 1118 DVKTIFLNDELNEKIYIEQPERFIVK**EKKVSFCQIILWLKASAQSMTQ 1267
DVKT FLN +L+E+IY+EQPE F EKKV C+++ L Q+ Q
Sbjct: 708 DVKTAFLNGDLDEEIYMEQPEGFSAPGQEKKV--CKLVKSLYGLKQAPKQ 755
Score = 96.3 bits (238), Expect(4) = 1e-77
Identities = 52/114 (45%), Positives = 73/114 (64%), Gaps = 1/114 (0%)
Frame = +1
Query: 1375 CFYLDDMFIMGTSKNIIKSAKKMLT-SNFDIKDLGVTDVILGIKVTRTLDGLVLSQLHYI 1551
C Y+DDM I+G+ +I S K ML KD+G+ DVILGIK+ RT + L+LSQ HY+
Sbjct: 791 CLYVDDMLIVGSDDKMITSTKNMLQIQGLTSKDMGLADVILGIKIKRTSNELILSQSHYV 850
Query: 1552 EKMLKTFNKFDISSTKIPFDYHNHNLKKSIGRRISHLEYS*IIGSLMYVINYDR 1713
+K+L F+K + + P D H L K+ G +S +EYS IIGSLMY+++ R
Sbjct: 851 DKILGKFDKDNSGVARTPVDVTLH-LSKNKGESVSQVEYSRIIGSLMYLMSCTR 903
Score = 48.5 bits (114), Expect(4) = 1e-77
Identities = 25/48 (52%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Frame = +3
Query: 1713 DIIYLIEKLSRNTSNLRVTHWEVLVKVLK--RCILDYRLHYTRYQLYL 1850
DI Y + KLSR TSN HW+ +++VLK R DY LHYTRY L
Sbjct: 905 DIAYAVGKLSRYTSNPGAKHWQGIIRVLKYLRFTRDYGLHYTRYPAVL 952
Score = 34.7 bits (78), Expect(4) = 1e-77
Identities = 17/26 (65%), Positives = 20/26 (76%)
Frame = +2
Query: 1919 K*TCIAQSTIES*FINLDKASEEAKW 1996
K T IA+ST+ES FI LDK EEA+W
Sbjct: 974 KQTVIARSTMESEFIALDKCGEEAEW 999
Score = 70.1 bits (170), Expect = 4e-09
Identities = 30/59 (50%), Positives = 39/59 (66%)
Frame = +3
Query: 1185 SSSNDRKRKCHFVKLFYGLKQVPNQ*HKKFDNVMIKNGLKIDECDKCVYYKNKNKNLIM 1361
S+ K+ C VK YGLKQ P Q H+KFDNVM+ +G KI+ECDKCVY K+ ++
Sbjct: 731 SAPGQEKKVCKLVKSLYGLKQAPKQWHEKFDNVMLSHGFKINECDKCVYVKDTEHGYVI 789
>emb|CAN63175.1| hypothetical protein VITISV_027195 [Vitis vinifera]
Length = 338
Score = 195 bits (496), Expect(3) = 7e-74
Identities = 92/134 (68%), Positives = 110/134 (82%)
Frame = +2
Query: 779 NEPQSFKEAMFTPKALFWKEVVNNELEPIMQNHT*ELVSLPPGNIPIGCKWIFKRKMKSD 958
NEP++FKEAM TP+A FWKE +NNE+E IM NHT +L+ LPPGN P+GCKWIFK+KMK D
Sbjct: 88 NEPKTFKEAMSTPEAPFWKEAINNEIESIMHNHTWKLMDLPPGNKPLGCKWIFKKKMKPD 147
Query: 959 DFIDKYKARLVAKGFKQKKCLDYFDMYSPITRITSIRMLIEIVALYKFEINQIDVKTIFL 1138
IDKYKARLVAKGFKQK+ LD+FD YSP+TRITSIR LI L+ +I+Q+D KT FL
Sbjct: 148 GTIDKYKARLVAKGFKQKEGLDFFDTYSPVTRITSIRXLIARTTLHNLKIHQMDAKTTFL 207
Query: 1139 NDELNEKIYIEQPE 1180
N EL E+IY+EQPE
Sbjct: 208 NGELEEEIYMEQPE 221
Score = 103 bits (257), Expect(3) = 7e-74
Identities = 48/88 (54%), Positives = 66/88 (75%)
Frame = +1
Query: 1375 CFYLDDMFIMGTSKNIIKSAKKMLTSNFDIKDLGVTDVILGIKVTRTLDGLVLSQLHYIE 1554
C Y+DDM I+ ++ ++IK+ KKMLTS FD+K++GV DVILGIK+ +T GL+LSQ HYIE
Sbjct: 246 CLYVDDMLIIDSNNDVIKATKKMLTSYFDMKNMGVVDVILGIKIGKTSSGLILSQCHYIE 305
Query: 1555 KMLKTFNKFDISSTKIPFDYHNHNLKKS 1638
K+LK FN++D S K P D + H K +
Sbjct: 306 KILKRFNQYDDSPIKTPVDLNLHLAKNN 333
Score = 29.3 bits (64), Expect(3) = 7e-74
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 1290 KNGLKIDECDKCVYYKNKNKNLIM 1361
++ K++ECDKCVY KN ++
Sbjct: 221 EDDFKMNECDKCVYTKNTQSEYVI 244
>emb|CAN76565.1| hypothetical protein VITISV_010942 [Vitis vinifera]
Length = 839
Score = 130 bits (328), Expect(4) = 3e-73
Identities = 64/110 (58%), Positives = 84/110 (76%)
Frame = +1
Query: 1375 CFYLDDMFIMGTSKNIIKSAKKMLTSNFDIKDLGVTDVILGIKVTRTLDGLVLSQLHYIE 1554
C Y+DDM I+G++ ++IK+ KKMLT+ FD+KD+GV DVILGIK+ +T GL+LSQ HYIE
Sbjct: 622 CLYVDDMLIIGSNNDVIKATKKMLTNYFDMKDMGVADVILGIKIAKTSSGLILSQCHYIE 681
Query: 1555 KMLKTFNKFDISSTKIPFDYHNHNLKKSIGRRISHLEYS*IIGSLMYVIN 1704
K+LK FN++D S K P D + H+ K + G I LEYS IIGSLMYV+N
Sbjct: 682 KILKRFNQYDDSPIKTPVDLNLHSTKNN-GPAIDQLEYSRIIGSLMYVMN 730
Score = 125 bits (313), Expect(4) = 3e-73
Identities = 70/112 (62%), Positives = 86/112 (76%)
Frame = +2
Query: 932 IFKRKMKSDDFIDKYKARLVAKGFKQKKCLDYFDMYSPITRITSIRMLIEIVALYKFEIN 1111
IFK+K+K D I+KYKARLVAKGFKQK+ LD+FD YSP+TRITSIR+LI IVAL+ FEI+
Sbjct: 478 IFKKKIKPDGTINKYKARLVAKGFKQKEDLDFFDTYSPVTRITSIRVLIAIVALHNFEIH 537
Query: 1112 QIDVKTIFLNDELNEKIYIEQPERFIVK**EKKVSFCQIILWLKASAQSMTQ 1267
Q+DVKT FLN EL E+IY+EQ E F+ EKKV C++I L Q+ Q
Sbjct: 538 QMDVKTTFLNGEL-EEIYMEQSEGFVAPGQEKKV--CKLIKSLYGLKQAPKQ 586
Score = 49.3 bits (116), Expect(4) = 3e-73
Identities = 25/48 (52%), Positives = 32/48 (66%), Gaps = 2/48 (4%)
Frame = +3
Query: 1713 DIIYLIEKLSRNTSNLRVTHWEVLVKVLK--RCILDYRLHYTRYQLYL 1850
DI Y + KLSR T+N+ HW+VLV+VL+ R L+Y LHY RY L
Sbjct: 735 DIAYAVNKLSRFTNNMGKDHWKVLVRVLRYLRYTLNYGLHYLRYPTLL 782
Score = 42.0 bits (97), Expect(4) = 3e-73
Identities = 28/60 (46%), Positives = 34/60 (56%), Gaps = 12/60 (20%)
Frame = +2
Query: 1841 TILE*YNNANQ*LS------------TFGGAVIL*KSSK*TCIAQSTIES*FINLDKASE 1984
T+LE Y++AN T GG I KSSK TCIA+ST+ES FI LDKA +
Sbjct: 780 TLLEGYSDANWIFDMKDSKSTSGYIFTIGGVAISRKSSKQTCIARSTMESEFIALDKAGK 839
Score = 61.6 bits (148), Expect = 1e-06
Identities = 26/53 (49%), Positives = 34/53 (64%)
Frame = +3
Query: 1203 KRKCHFVKLFYGLKQVPNQ*HKKFDNVMIKNGLKIDECDKCVYYKNKNKNLIM 1361
K+ C +K YGLKQ P Q H+KFD VM+ N KI+ECDK VY +N ++
Sbjct: 568 KKVCKLIKSLYGLKQAPKQWHEKFDKVMLSNDFKINECDKYVYTRNTQSEYVI 620
>gb|ABA93790.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1370
Score = 147 bits (372), Expect(5) = 8e-70
Identities = 67/134 (50%), Positives = 99/134 (73%)
Frame = +2
Query: 785 PQSFKEAMFTPKALFWKEVVNNELEPIMQNHT*ELVSLPPGNIPIGCKWIFKRKMKSDDF 964
P++ +E +P A +WKE V +E++ IM N T E+V P G P+GCKW+FK+K++ D
Sbjct: 858 PRTIEETYSSPDADYWKEAVRSEMDSIMSNGTWEVVERPYGCKPVGCKWVFKKKLRPDGT 917
Query: 965 IDKYKARLVAKGFKQKKCLDYFDMYSPITRITSIRMLIEIVALYKFEINQIDVKTIFLND 1144
I+KYKARLVAKG+ QK+ D+FD YSP+ R+T IR+L+ +VA + ++Q+DVKT FLN
Sbjct: 918 IEKYKARLVAKGYTQKEGEDFFDTYSPVARLTMIRVLLALVASHGLLVHQMDVKTAFLNG 977
Query: 1145 ELNEKIYIEQPERF 1186
EL E+IY++QP+ +
Sbjct: 978 ELEEEIYMDQPDGY 991
Score = 87.0 bits (214), Expect(5) = 8e-70
Identities = 51/116 (43%), Positives = 75/116 (64%), Gaps = 3/116 (2%)
Frame = +1
Query: 1375 CFYLDDMFIMGTSKNIIKSAKKMLTSNFDIKDLGVTDVILGIKVTRTLD-GLVLSQLHYI 1551
C Y+DD+ I GTS N+I+ K L+ +F++KDLG+ DVIL IK+ R + G+ L+Q HY+
Sbjct: 1052 CLYVDDILIFGTSLNVIEEVKDFLSKSFEMKDLGMADVILNIKLLRGDEGGITLAQSHYV 1111
Query: 1552 EKMLKTFNKFDISSTKIPFDYHNHNLKKSIGRRIS--HLEYS*IIGSLMYVINYDR 1713
+K+L F D + P+D + L+K+ RRI+ L YS IIGSLMY+ + R
Sbjct: 1112 DKVLSRFGYNDCKAAPTPYD-PSVLLRKN--RRIARDQLRYSQIIGSLMYLASATR 1164
Score = 53.9 bits (128), Expect(5) = 8e-70
Identities = 22/42 (52%), Positives = 28/42 (66%)
Frame = +3
Query: 1212 CHFVKLFYGLKQVPNQ*HKKFDNVMIKNGLKIDECDKCVYYK 1337
C +K YGLKQ P Q H+KFDN + G ++E DKCVYY+
Sbjct: 1001 CKLLKSLYGLKQAPKQWHEKFDNTLTSAGFVVNEDDKCVYYR 1042
Score = 34.7 bits (78), Expect(5) = 8e-70
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 1713 DIIYLIEKLSRNTSNLRVTHWEVLVKVLK--RCILDYRLHYTRY 1838
DI + + KLSR SNL HW L +V+ + + Y +HY Y
Sbjct: 1166 DISFAVSKLSRFVSNLGDDHWHALERVMHYLKGTMSYGIHYAGY 1209
Score = 32.3 bits (72), Expect(5) = 8e-70
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +2
Query: 1883 TFGGAVIL*KSSK*TCIAQSTIES*FINLDKASEEAKW 1996
T GG + KS K T + +ST+E +LD A+ EA+W
Sbjct: 1237 TLGGGAVSWKSCKQTILTRSTMEVELTSLDTATVEAEW 1274
>emb|CAN66710.1| hypothetical protein VITISV_006397 [Vitis vinifera]
Length = 1105
Score = 174 bits (440), Expect(4) = 9e-70
Identities = 81/167 (48%), Positives = 118/167 (70%)
Frame = +2
Query: 767 LSFRNEPQSFKEAMFTPKALFWKEVVNNELEPIMQNHT*ELVSLPPGNIPIGCKWIFKRK 946
L +P+++KEAM + FWKE +N+E++ IM N T ELV LPPG+ PIGCKW+F+RK
Sbjct: 588 LQIEEDPKTYKEAMASRDVAFWKEAINDEMDSIMSNQTWELVDLPPGSKPIGCKWVFRRK 647
Query: 947 MKSDDFIDKYKARLVAKGFKQKKCLDYFDMYSPITRITSIRMLIEIVALYKFEINQIDVK 1126
+D I +KARLVAKGFKQ++ +DYFD Y+P+ R TSIR+L + +++ ++Q+DVK
Sbjct: 648 YHTDGMIQTFKARLVAKGFKQREGIDYFDTYAPVARTTSIRILFALASIHNLFVHQMDVK 707
Query: 1127 TIFLNDELNEKIYIEQPERFIVK**EKKVSFCQIILWLKASAQSMTQ 1267
T FLN +LNE++Y+EQPE F++ E KV C+++ L Q+ Q
Sbjct: 708 TAFLNGDLNEEVYMEQPEGFVLPGNENKV--CKLVKSLYGLKQAPKQ 752
Score = 93.6 bits (231), Expect(4) = 9e-70
Identities = 50/113 (44%), Positives = 65/113 (57%)
Frame = +1
Query: 1375 CFYLDDMFIMGTSKNIIKSAKKMLTSNFDIKDLGVTDVILGIKVTRTLDGLVLSQLHYIE 1554
C Y+DDM I+ I K+ L+S F +KDLG D ILGIKV R G L+Q HYIE
Sbjct: 788 CLYVDDMLILSDDMRGIIETKRFLSSTFKMKDLGEVDTILGIKVKRNSGGYALNQTHYIE 847
Query: 1555 KMLKTFNKFDISSTKIPFDYHNHNLKKSIGRRISHLEYS*IIGSLMYVINYDR 1713
K++ F+ I PFD + L+K+ GR ++ LEY+ IGSLMY R
Sbjct: 848 KVVSKFSHLKIKDANTPFD-SSIKLEKNDGRSVAQLEYASAIGSLMYAAQCTR 899
Score = 34.7 bits (78), Expect(4) = 9e-70
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = +2
Query: 1883 TFGGAVIL*KSSK*TCIAQSTIES*FINLDKASEEAKW 1996
T GG + S K TCI+ ST+E+ FI L +EA+W
Sbjct: 972 TLGGGAVSWGSKKQTCISHSTMEAEFIALAATRKEAEW 1009
Score = 33.1 bits (74), Expect(4) = 9e-70
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = +3
Query: 1713 DIIYLIEKLSRNTSNLRVTHWEVLVKVLK--RCILDYRLHYTRY 1838
DI + + KLSR TSN V HW+ + +VL R + L Y+++
Sbjct: 901 DISFAVSKLSRFTSNPSVEHWKAIGRVLSYLRNTKELSLQYSKF 944
>emb|CAN69855.1| hypothetical protein VITISV_041230 [Vitis vinifera]
Length = 1236
Score = 171 bits (432), Expect(4) = 3e-69
Identities = 80/167 (47%), Positives = 116/167 (69%)
Frame = +2
Query: 767 LSFRNEPQSFKEAMFTPKALFWKEVVNNELEPIMQNHT*ELVSLPPGNIPIGCKWIFKRK 946
L +P+++KEAM + FWKE +N+E++ IM N T ELV LPPG+ PIGCKW+F+RK
Sbjct: 732 LQIEEDPKTYKEAMASRDVAFWKEAINDEMDSIMSNQTWELVDLPPGSKPIGCKWVFRRK 791
Query: 947 MKSDDFIDKYKARLVAKGFKQKKCLDYFDMYSPITRITSIRMLIEIVALYKFEINQIDVK 1126
+D I +KARLVAKGFKQ++ +DYFD Y+P+ R T IR+L + +++ ++Q+DVK
Sbjct: 792 YHTDGMIQTFKARLVAKGFKQREGIDYFDTYAPVARTTXIRILFALASIHNLFVHQMDVK 851
Query: 1127 TIFLNDELNEKIYIEQPERFIVK**EKKVSFCQIILWLKASAQSMTQ 1267
T FLN +LNE++Y+EQPE F++ E KV C+++ L Q Q
Sbjct: 852 TAFLNGBLNEEVYMEQPEGFVLLGNENKV--CKLVKSLYGLKQDPKQ 896
Score = 94.7 bits (234), Expect(4) = 3e-69
Identities = 50/113 (44%), Positives = 66/113 (58%)
Frame = +1
Query: 1375 CFYLDDMFIMGTSKNIIKSAKKMLTSNFDIKDLGVTDVILGIKVTRTLDGLVLSQLHYIE 1554
C Y+DDM I+ I K+ L+S F +KDLG D ILGIKV R +G L+Q HYIE
Sbjct: 932 CLYVDDMLILSDDMKGIIETKRFLSSTFKMKDLGEVDTILGIKVKRNSEGYALNQTHYIE 991
Query: 1555 KMLKTFNKFDISSTKIPFDYHNHNLKKSIGRRISHLEYS*IIGSLMYVINYDR 1713
K++ F+ I PFD + L+K+ GR ++ LEY+ IGSLMY R
Sbjct: 992 KVVSKFSHLKIKDANTPFD-SSIKLEKNDGRSVAQLEYASAIGSLMYAAQCTR 1043
Score = 34.7 bits (78), Expect(4) = 3e-69
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +3
Query: 1713 DIIYLIEKLSRNTSNLRVTHWEVLVKVL 1796
DI + + KLSR SNLRV HW+ + +VL
Sbjct: 1045 DISFAVSKLSRFISNLRVEHWKAIGRVL 1072
Score = 33.1 bits (74), Expect(4) = 3e-69
Identities = 20/51 (39%), Positives = 31/51 (60%)
Frame = +2
Query: 1844 ILE*YNNANQ*LSTFGGAVIL*KSSK*TCIAQSTIES*FINLDKASEEAKW 1996
I+E Y++A +S+ G + S K TCI+ ST+E+ FI L +EA+W
Sbjct: 1091 IIEGYSDARW-ISSVGDNLSTTGSKKQTCISHSTMEAEFIALAATGKEAEW 1140
>gb|ABA99134.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1083
Score = 148 bits (373), Expect(5) = 6e-69
Identities = 67/137 (48%), Positives = 101/137 (73%)
Frame = +2
Query: 785 PQSFKEAMFTPKALFWKEVVNNELEPIMQNHT*ELVSLPPGNIPIGCKWIFKRKMKSDDF 964
P++ +EA +P A +WKE V +E++ IM N T E+V P G P+GCKW+FK+K++ D
Sbjct: 571 PRTIEEAYSSPDADYWKEAVRSEMDSIMSNGTWEVVERPYGCKPVGCKWVFKKKLRPDGT 630
Query: 965 IDKYKARLVAKGFKQKKCLDYFDMYSPITRITSIRMLIEIVALYKFEINQIDVKTIFLND 1144
I+KYKARLVAK + QK+ D+FD YSP+ R+T+IR+L+ + A + ++Q+DVKT FLN
Sbjct: 631 IEKYKARLVAKDYTQKEGDDFFDTYSPVARLTTIRVLLALAASHGLLVHQMDVKTTFLNG 690
Query: 1145 ELNEKIYIEQPERFIVK 1195
EL E+IY+ QP+ +++K
Sbjct: 691 ELEEEIYMNQPDGYVLK 707
Score = 84.0 bits (206), Expect(5) = 6e-69
Identities = 50/116 (43%), Positives = 72/116 (62%), Gaps = 3/116 (2%)
Frame = +1
Query: 1375 CFYLDDMFIMGTSKNIIKSAKKMLTSNFDIKDLGVTDVILGIKVTRTLD-GLVLSQLHYI 1551
C Y+ D+ I GTS N+I+ K L+ +F++KDLGV DV+L IK+ R + G+ L Q HY+
Sbjct: 765 CLYVGDILIFGTSLNVIEEVKDFLSKSFEMKDLGVADVVLNIKLLRGDEGGITLVQSHYV 824
Query: 1552 EKMLKTFNKFDISSTKIPFDYHNHNLKKSIGRRIS--HLEYS*IIGSLMYVINYDR 1713
+K+L F D P+D + L+K+ RRI+ L YS IIGSLMY+ + R
Sbjct: 825 DKVLSRFGYSDCKPAPTPYD-SSVLLRKN--RRIARDQLRYSQIIGSLMYLASATR 877
Score = 51.6 bits (122), Expect(5) = 6e-69
Identities = 20/42 (47%), Positives = 27/42 (64%)
Frame = +3
Query: 1212 CHFVKLFYGLKQVPNQ*HKKFDNVMIKNGLKIDECDKCVYYK 1337
C +K YGLK+ P Q H+KFD + G ++E DKCVYY+
Sbjct: 714 CKLLKSLYGLKKAPKQWHEKFDTTLTSTGFIVNEADKCVYYR 755
Score = 36.6 bits (83), Expect(5) = 6e-69
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = +3
Query: 1713 DIIYLIEKLSRNTSNLRVTHWEVLVKVLK--RCILDYRLHYTRY 1838
DI + + KLSR SN HW+ L +V++ + + Y +HYT Y
Sbjct: 879 DISFAVSKLSRFVSNPGDDHWQALERVMRYLKGTMSYEIHYTGY 922
Score = 32.3 bits (72), Expect(5) = 6e-69
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +2
Query: 1883 TFGGAVIL*KSSK*TCIAQSTIES*FINLDKASEEAKW 1996
T GG + KS K T + +ST+E+ LD A+ EA+W
Sbjct: 950 TLGGGAVSWKSCKQTILTRSTMEAELTALDTATVEAEW 987
>gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris]
Length = 1290
Score = 158 bits (399), Expect(4) = 3e-68
Identities = 82/163 (50%), Positives = 111/163 (68%)
Frame = +2
Query: 779 NEPQSFKEAMFTPKALFWKEVVNNELEPIMQNHT*ELVSLPPGNIPIGCKWIFKRKMKSD 958
N+P SF EA P A W + + ELE I +N+T LV LP G PIGCKWIFK+K D
Sbjct: 767 NDPISFVEATSAPDAKHWDKAIKTELESIKKNNTWTLVDLPKGAKPIGCKWIFKKKYHPD 826
Query: 959 DFIDKYKARLVAKGFKQKKCLDYFDMYSPITRITSIRMLIEIVALYKFEINQIDVKTIFL 1138
I+KYKARLVAKGF QK +DYFD ++P+TRI+SIR+L+ + +++K I+Q+DVKT FL
Sbjct: 827 GSIEKYKARLVAKGFTQKHNIDYFDTFAPVTRISSIRVLLALASIHKLVIHQMDVKTTFL 886
Query: 1139 NDELNEKIYIEQPERFIVK**EKKVSFCQIILWLKASAQSMTQ 1267
N EL E+IY+ QPE +V ++KV C+++ L Q+ Q
Sbjct: 887 NGELEEEIYMTQPEGCVVLGQKEKV--CKLLKSLYGLKQAPKQ 927
Score = 100 bits (250), Expect(4) = 3e-68
Identities = 50/113 (44%), Positives = 72/113 (63%)
Frame = +1
Query: 1375 CFYLDDMFIMGTSKNIIKSAKKMLTSNFDIKDLGVTDVILGIKVTRTLDGLVLSQLHYIE 1554
C Y+DDM I GT +I+ K L S F++KD+G VILG+K+ R D ++LSQ Y E
Sbjct: 963 CLYVDDMLIFGTCNDIVFKTKLFLGSKFEMKDMGEASVILGVKIIRKGDSILLSQEKYTE 1022
Query: 1555 KMLKTFNKFDISSTKIPFDYHNHNLKKSIGRRISHLEYS*IIGSLMYVINYDR 1713
K+LK F +D S P+D N LKK+ G IS +Y+ IIGSL++++++ R
Sbjct: 1023 KLLKKFGYYDFKSVSTPYD-ANSKLKKNRGESISQTQYAQIIGSLLHLMSFSR 1074
Score = 37.4 bits (85), Expect(4) = 3e-68
Identities = 17/38 (44%), Positives = 26/38 (68%)
Frame = +2
Query: 1883 TFGGAVIL*KSSK*TCIAQSTIES*FINLDKASEEAKW 1996
T GG + +S++ T IA+ST+ES F+ L+ A EA+W
Sbjct: 1147 TLGGGAVTWRSARQTIIARSTMESEFVALEMAGSEAEW 1184
Score = 33.5 bits (75), Expect(4) = 3e-68
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +3
Query: 1713 DIIYLIEKLSRNTSNLRVTHWEVLVKVLK--RCILDYRLHYTRYQLYL 1850
DI Y + +LSR T HWE L +++K R +DY + Y+ + L
Sbjct: 1076 DIAYAVGRLSRCTQCPSQDHWEALARLMKYLRGTMDYAIEYSGFPAVL 1123
>gb|AAT58810.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1320
Score = 153 bits (387), Expect(4) = 3e-65
Identities = 75/161 (46%), Positives = 113/161 (70%)
Frame = +2
Query: 785 PQSFKEAMFTPKALFWKEVVNNELEPIMQNHT*ELVSLPPGNIPIGCKWIFKRKMKSDDF 964
P+S EA +P A +WKE V +E++ I+ N T E+ P G P+GCKW+FK+K++ D
Sbjct: 791 PKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGT 850
Query: 965 IDKYKARLVAKGFKQKKCLDYFDMYSPITRITSIRMLIEIVALYKFEINQIDVKTIFLND 1144
I+KYKARLVAKG+ QK+ D+FD YSP+ R+T+IR+L+ + A + ++Q+DVKT FLN
Sbjct: 851 IEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNG 910
Query: 1145 ELNEKIYIEQPERFIVK**EKKVSFCQIILWLKASAQSMTQ 1267
EL+E+IY++QP+ F+V+ E KV C+++ L Q+ Q
Sbjct: 911 ELDEEIYMDQPDGFVVEGQEGKV--CKLLKSLYGLKQAPKQ 949
Score = 99.0 bits (245), Expect(4) = 3e-65
Identities = 52/113 (46%), Positives = 71/113 (62%)
Frame = +1
Query: 1375 CFYLDDMFIMGTSKNIIKSAKKMLTSNFDIKDLGVTDVILGIKVTRTLDGLVLSQLHYIE 1554
C Y+DD+ I GT+ +I K L+ NFD+KDLGV DVIL IK+ R +G+ L Q HY+E
Sbjct: 985 CLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVE 1044
Query: 1555 KMLKTFNKFDISSTKIPFDYHNHNLKKSIGRRISHLEYS*IIGSLMYVINYDR 1713
K+L F D + P+D H+ L+K+ + LEYS IIGSLMY+ + R
Sbjct: 1045 KILNRFGYIDSKPSPTPYD-HSLLLRKNKRIARNQLEYSQIIGSLMYLASATR 1096
Score = 36.2 bits (82), Expect(4) = 3e-65
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = +3
Query: 1713 DIIYLIEKLSRNTSNLRVTHWEVLVKVLK--RCILDYRLHYTRYQLYL 1850
DI + + KLSR TSN HW L +V++ + ++ LHYT Y + L
Sbjct: 1098 DISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPVVL 1145
Score = 31.2 bits (69), Expect(4) = 3e-65
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +2
Query: 1883 TFGGAVIL*KSSK*TCIAQSTIES*FINLDKASEEAKW 1996
T GG + +S K T + +ST+E+ LD A+ EA+W
Sbjct: 1169 TLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEW 1206
>gb|AAT38001.1| Putative polyprotein [Oryza sativa Japonica Group]
Length = 1297
Score = 153 bits (387), Expect(4) = 3e-65
Identities = 75/161 (46%), Positives = 113/161 (70%)
Frame = +2
Query: 785 PQSFKEAMFTPKALFWKEVVNNELEPIMQNHT*ELVSLPPGNIPIGCKWIFKRKMKSDDF 964
P+S EA +P A +WKE V +E++ I+ N T E+ P G P+GCKW+FK+K++ D
Sbjct: 791 PKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGT 850
Query: 965 IDKYKARLVAKGFKQKKCLDYFDMYSPITRITSIRMLIEIVALYKFEINQIDVKTIFLND 1144
I+KYKARLVAKG+ QK+ D+FD YSP+ R+T+IR+L+ + A + ++Q+DVKT FLN
Sbjct: 851 IEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNG 910
Query: 1145 ELNEKIYIEQPERFIVK**EKKVSFCQIILWLKASAQSMTQ 1267
EL+E+IY++QP+ F+V+ E KV C+++ L Q+ Q
Sbjct: 911 ELDEEIYMDQPDGFVVEGQEGKV--CKLLKSLYGLKQAPKQ 949
Score = 99.0 bits (245), Expect(4) = 3e-65
Identities = 52/113 (46%), Positives = 71/113 (62%)
Frame = +1
Query: 1375 CFYLDDMFIMGTSKNIIKSAKKMLTSNFDIKDLGVTDVILGIKVTRTLDGLVLSQLHYIE 1554
C Y+DD+ I GT+ +I K L+ NFD+KDLGV DVIL IK+ R +G+ L Q HY+E
Sbjct: 985 CLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVE 1044
Query: 1555 KMLKTFNKFDISSTKIPFDYHNHNLKKSIGRRISHLEYS*IIGSLMYVINYDR 1713
K+L F D + P+D H+ L+K+ + LEYS IIGSLMY+ + R
Sbjct: 1045 KILNRFGYIDSKPSPTPYD-HSLLLRKNKRIARNQLEYSQIIGSLMYLASATR 1096
Score = 36.2 bits (82), Expect(4) = 3e-65
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = +3
Query: 1713 DIIYLIEKLSRNTSNLRVTHWEVLVKVLK--RCILDYRLHYTRYQLYL 1850
DI + + KLSR TSN HW L +V++ + ++ LHYT Y + L
Sbjct: 1098 DISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPVVL 1145
Score = 31.2 bits (69), Expect(4) = 3e-65
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +2
Query: 1883 TFGGAVIL*KSSK*TCIAQSTIES*FINLDKASEEAKW 1996
T GG + +S K T + +ST+E+ LD A+ EA+W
Sbjct: 1169 TLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEW 1206
>gb|ABA92101.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 923
Score = 154 bits (388), Expect(4) = 5e-65
Identities = 74/161 (45%), Positives = 113/161 (70%)
Frame = +2
Query: 785 PQSFKEAMFTPKALFWKEVVNNELEPIMQNHT*ELVSLPPGNIPIGCKWIFKRKMKSDDF 964
P+S EA +P A +WK+ V NE++ I+ N T E+ P G P+GCKW+FK+K++ DD
Sbjct: 440 PKSISEAYASPDADYWKKAVRNEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDDT 499
Query: 965 IDKYKARLVAKGFKQKKCLDYFDMYSPITRITSIRMLIEIVALYKFEINQIDVKTIFLND 1144
I+KYKARLVAKG+ QK+ D+FD YSP+ R+T+I +L+ + A + ++Q+D+KT FLN
Sbjct: 500 IEKYKARLVAKGYTQKEDGDFFDTYSPVARLTTIHVLLSLAASHGLLVHQMDIKTAFLNG 559
Query: 1145 ELNEKIYIEQPERFIVK**EKKVSFCQIILWLKASAQSMTQ 1267
EL+E+IY++QP+ F+V+ E KV C+++ L Q+ Q
Sbjct: 560 ELDEEIYMDQPDGFVVEGQEGKV--CKLLKSLYGLKQAPKQ 598
Score = 96.7 bits (239), Expect(4) = 5e-65
Identities = 52/113 (46%), Positives = 70/113 (61%)
Frame = +1
Query: 1375 CFYLDDMFIMGTSKNIIKSAKKMLTSNFDIKDLGVTDVILGIKVTRTLDGLVLSQLHYIE 1554
C Y+DD+ I GT+ +I K L+ NFD+KDLGV DVIL IK+ R +G+ L Q HY+E
Sbjct: 634 CLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVE 693
Query: 1555 KMLKTFNKFDISSTKIPFDYHNHNLKKSIGRRISHLEYS*IIGSLMYVINYDR 1713
KML F D + P+D + L+K+ + LEYS IIGSLMY+ + R
Sbjct: 694 KMLNRFGYIDSKPSPTPYD-PSLLLRKNKRIARNQLEYSQIIGSLMYLASATR 745
Score = 35.8 bits (81), Expect(4) = 5e-65
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +3
Query: 1713 DIIYLIEKLSRNTSNLRVTHWEVLVKVLK--RCILDYRLHYTRYQLYL 1850
DI + + KLSR TSN HW L +V++ + ++ LHYT Y L
Sbjct: 747 DISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTIELGLHYTGYPAVL 794
Score = 32.7 bits (73), Expect(4) = 5e-65
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +2
Query: 1883 TFGGAVIL*KSSK*TCIAQSTIES*FINLDKASEEAKW 1996
T GG + +S K T + +ST+E+ LD A++EA+W
Sbjct: 818 TLGGGAVSWRSCKQTILTRSTMEAELTALDTATDEAEW 855
>gb|AAT44162.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1302
Score = 153 bits (387), Expect(4) = 1e-64
Identities = 75/161 (46%), Positives = 113/161 (70%)
Frame = +2
Query: 785 PQSFKEAMFTPKALFWKEVVNNELEPIMQNHT*ELVSLPPGNIPIGCKWIFKRKMKSDDF 964
P+S EA +P A +WKE V +E++ I+ N T E+ P G P+GCKW+FK+K++ D
Sbjct: 791 PKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGT 850
Query: 965 IDKYKARLVAKGFKQKKCLDYFDMYSPITRITSIRMLIEIVALYKFEINQIDVKTIFLND 1144
I+KYKARLVAKG+ QK+ D+FD YSP+ R+T+IR+L+ + A + ++Q+DVKT FLN
Sbjct: 851 IEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNG 910
Query: 1145 ELNEKIYIEQPERFIVK**EKKVSFCQIILWLKASAQSMTQ 1267
EL+E+IY++QP+ F+V+ E KV C+++ L Q+ Q
Sbjct: 911 ELDEEIYMDQPDGFVVEGQEGKV--CKLLKSLYGLKQAPKQ 949
Score = 95.1 bits (235), Expect(4) = 1e-64
Identities = 51/113 (45%), Positives = 70/113 (61%)
Frame = +1
Query: 1375 CFYLDDMFIMGTSKNIIKSAKKMLTSNFDIKDLGVTDVILGIKVTRTLDGLVLSQLHYIE 1554
C Y+DD+ I GT+ +I K L+ NFD+KDLGV DVIL IK+ R +G+ L Q HY+E
Sbjct: 985 CLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVE 1044
Query: 1555 KMLKTFNKFDISSTKIPFDYHNHNLKKSIGRRISHLEYS*IIGSLMYVINYDR 1713
K+L F D + P+D + L+K+ + LEYS IIGSLMY+ + R
Sbjct: 1045 KILNRFGYIDSKPSPTPYD-PSLLLRKNKRIARNQLEYSQIIGSLMYLASATR 1096
Score = 38.1 bits (87), Expect(4) = 1e-64
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = +3
Query: 1713 DIIYLIEKLSRNTSNLRVTHWEVLVKVLK--RCILDYRLHYTRYQLYL 1850
DI + + KLSR TSN HW L +V++ + ++ LHYTRY L
Sbjct: 1098 DISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTRYPAVL 1145
Score = 31.2 bits (69), Expect(4) = 1e-64
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +2
Query: 1883 TFGGAVIL*KSSK*TCIAQSTIES*FINLDKASEEAKW 1996
T GG + +S K T + +ST+E+ LD A+ EA+W
Sbjct: 1169 TLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEW 1206
>gb|AAM00978.1|AC090482_7 Putative retrovirus-related pol polyprotein from transposon Tnt 1-94
[Oryza sativa Japonica Group] gi|31431305|gb|AAP53107.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 536
Score = 147 bits (370), Expect(5) = 2e-64
Identities = 66/137 (48%), Positives = 102/137 (74%)
Frame = +2
Query: 785 PQSFKEAMFTPKALFWKEVVNNELEPIMQNHT*ELVSLPPGNIPIGCKWIFKRKMKSDDF 964
P++ +EA +P A +WKE V +E++ IM N T E+V P G P+GCKW+FK+K++ D
Sbjct: 53 PRTIEEAYSSPDADYWKEAVRSEMDSIMSNGTWEVVERPYGCKPVGCKWVFKKKLRPDGT 112
Query: 965 IDKYKARLVAKGFKQKKCLDYFDMYSPITRITSIRMLIEIVALYKFEINQIDVKTIFLND 1144
I+KYKARLVAKG+ QK+ D+FD YSP+ R+T+IR+L+ + A + ++Q+DVKT FLN
Sbjct: 113 IEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLALAASHGLLVHQMDVKTAFLNG 172
Query: 1145 ELNEKIYIEQPERFIVK 1195
EL E+I ++QP+ ++++
Sbjct: 173 ELEEEICMDQPDGYVLE 189
Score = 66.2 bits (160), Expect(5) = 2e-64
Identities = 47/116 (40%), Positives = 65/116 (56%), Gaps = 3/116 (2%)
Frame = +1
Query: 1375 CFYLDDMFIMGTSKNIIKSAKKMLTSNFDIKDLGVTDVILGIKVTRTLD-GLVLSQLHYI 1551
C Y+DD+ I GTS N+I+ +DLG DVIL IK+ R + G+ L Q HY+
Sbjct: 246 CLYVDDILIFGTSLNVIE------------EDLGEADVILNIKLQRGDEGGITLVQSHYV 293
Query: 1552 EKMLKTFNKFDISSTKIPFDYHNHNLKKSIGRRIS--HLEYS*IIGSLMYVINYDR 1713
+K+L F D P+D + L+K+ RRI+ L YS IIGSLMY+ + R
Sbjct: 294 DKVLSHFGYSDCKPAPTPYD-PSVLLRKN--RRIARDQLRYSQIIGSLMYLASATR 346
Score = 53.1 bits (126), Expect(5) = 2e-64
Identities = 22/50 (44%), Positives = 30/50 (60%)
Frame = +3
Query: 1212 CHFVKLFYGLKQVPNQ*HKKFDNVMIKNGLKIDECDKCVYYKNKNKNLIM 1361
C +K YGLKQ P Q H+KFD + G ++E DKCVYY+ +I+
Sbjct: 196 CKLLKSLYGLKQAPKQWHEKFDTTLTSAGFVVNEADKCVYYRYGGGGVIL 245
Score = 37.4 bits (85), Expect(5) = 2e-64
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Frame = +3
Query: 1713 DIIYLIEKLSRNTSNLRVTHWEVLVKVLK--RCILDYRLHYTRY 1838
DI + + KLSR+ SN HW+ L +V++ + + Y +HYT Y
Sbjct: 348 DISFAVSKLSRSVSNPGDDHWQALERVMRYLKGTMSYGIHYTGY 391
Score = 33.9 bits (76), Expect(5) = 2e-64
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = +2
Query: 1883 TFGGAVIL*KSSK*TCIAQSTIES*FINLDKASEEAKW 1996
T GG+ + KS K T + +STIE+ +LD A EA+W
Sbjct: 403 TLGGSAVSWKSCKQTILTRSTIEAELTSLDTAIVEAEW 440
>emb|CAE04541.2| OSJNBa0040D17.9 [Oryza sativa Japonica Group]
Length = 1319
Score = 153 bits (387), Expect(4) = 3e-64
Identities = 75/161 (46%), Positives = 113/161 (70%)
Frame = +2
Query: 785 PQSFKEAMFTPKALFWKEVVNNELEPIMQNHT*ELVSLPPGNIPIGCKWIFKRKMKSDDF 964
P+S EA +P A +WKE V +E++ I+ N T E+ P G P+GCKW+FK+K++ D
Sbjct: 791 PKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGT 850
Query: 965 IDKYKARLVAKGFKQKKCLDYFDMYSPITRITSIRMLIEIVALYKFEINQIDVKTIFLND 1144
I+KYKARLVAKG+ QK+ D+FD YSP+ R+T+IR+L+ + A + ++Q+DVKT FLN
Sbjct: 851 IEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNG 910
Query: 1145 ELNEKIYIEQPERFIVK**EKKVSFCQIILWLKASAQSMTQ 1267
EL+E+IY++QP+ F+V+ E KV C+++ L Q+ Q
Sbjct: 911 ELDEEIYMDQPDGFVVEGQEGKV--CKLLKSLYGLKQAPKQ 949
Score = 95.1 bits (235), Expect(4) = 3e-64
Identities = 51/113 (45%), Positives = 70/113 (61%)
Frame = +1
Query: 1375 CFYLDDMFIMGTSKNIIKSAKKMLTSNFDIKDLGVTDVILGIKVTRTLDGLVLSQLHYIE 1554
C Y+DD+ I GT+ +I K L+ NFD+KDLGV DVIL IK+ R +G+ L Q HY+E
Sbjct: 985 CLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVE 1044
Query: 1555 KMLKTFNKFDISSTKIPFDYHNHNLKKSIGRRISHLEYS*IIGSLMYVINYDR 1713
K+L F D + P+D + L+K+ + LEYS IIGSLMY+ + R
Sbjct: 1045 KILNRFGYIDSKPSPTPYD-PSLLLRKNKRIARNQLEYSQIIGSLMYLASATR 1096
Score = 37.0 bits (84), Expect(4) = 3e-64
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = +3
Query: 1713 DIIYLIEKLSRNTSNLRVTHWEVLVKVLK--RCILDYRLHYTRYQLYL 1850
DI + + KLSR TSN HW VL +V++ + ++ LHYT Y L
Sbjct: 1098 DISFAVSKLSRFTSNPGDDHWRVLERVMRYLKGTVELGLHYTGYPAVL 1145
Score = 31.2 bits (69), Expect(4) = 3e-64
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +2
Query: 1883 TFGGAVIL*KSSK*TCIAQSTIES*FINLDKASEEAKW 1996
T GG + +S K T + +ST+E+ LD A+ EA+W
Sbjct: 1169 TLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEW 1206
>gb|AAT93941.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1433
Score = 153 bits (387), Expect(4) = 4e-64
Identities = 75/161 (46%), Positives = 113/161 (70%)
Frame = +2
Query: 785 PQSFKEAMFTPKALFWKEVVNNELEPIMQNHT*ELVSLPPGNIPIGCKWIFKRKMKSDDF 964
P+S EA +P A +WKE V +E++ I+ N T E+ P G P+GCKW+FK+K++ D
Sbjct: 785 PKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGT 844
Query: 965 IDKYKARLVAKGFKQKKCLDYFDMYSPITRITSIRMLIEIVALYKFEINQIDVKTIFLND 1144
I+KYKARLVAKG+ QK+ D+FD YSP+ R+T+IR+L+ + A + ++Q+DVKT FLN
Sbjct: 845 IEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNG 904
Query: 1145 ELNEKIYIEQPERFIVK**EKKVSFCQIILWLKASAQSMTQ 1267
EL+E+IY++QP+ F+V+ E KV C+++ L Q+ Q
Sbjct: 905 ELDEEIYMDQPDGFVVEGQEGKV--CKLLKSLYGLKQAPKQ 943
Score = 95.1 bits (235), Expect(4) = 4e-64
Identities = 51/113 (45%), Positives = 70/113 (61%)
Frame = +1
Query: 1375 CFYLDDMFIMGTSKNIIKSAKKMLTSNFDIKDLGVTDVILGIKVTRTLDGLVLSQLHYIE 1554
C Y+DD+ I GT+ +I K L+ NFD+KDLGV DVIL IK+ R +G+ L Q HY+E
Sbjct: 979 CLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVE 1038
Query: 1555 KMLKTFNKFDISSTKIPFDYHNHNLKKSIGRRISHLEYS*IIGSLMYVINYDR 1713
K+L F D + P+D + L+K+ + LEYS IIGSLMY+ + R
Sbjct: 1039 KILNRFGYIDSKPSPTPYD-PSLLLRKNKRIARNQLEYSQIIGSLMYLASATR 1090
Score = 36.2 bits (82), Expect(4) = 4e-64
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = +3
Query: 1713 DIIYLIEKLSRNTSNLRVTHWEVLVKVLK--RCILDYRLHYTRYQLYL 1850
DI + + KLSR TSN HW L +V++ + ++ LHYT Y + L
Sbjct: 1092 DISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPVVL 1139
Score = 31.2 bits (69), Expect(4) = 4e-64
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +2
Query: 1883 TFGGAVIL*KSSK*TCIAQSTIES*FINLDKASEEAKW 1996
T GG + +S K T + +ST+E+ LD A+ EA+W
Sbjct: 1163 TLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEW 1200
>gb|AAL75486.1|AF466202_12 putative Fourf gag/pol protein [Zea mays]
Length = 1292
Score = 160 bits (406), Expect(4) = 4e-64
Identities = 84/161 (52%), Positives = 110/161 (68%)
Frame = +2
Query: 785 PQSFKEAMFTPKALFWKEVVNNELEPIMQNHT*ELVSLPPGNIPIGCKWIFKRKMKSDDF 964
P + EA F+P A WKE V +E+E IM N T E+V P G PIGCKWIFK+K++ D
Sbjct: 807 PTTISEAYFSPDADLWKEAVRSEMESIMSNGTWEVVDRPYGCQPIGCKWIFKKKLRPDGT 866
Query: 965 IDKYKARLVAKGFKQKKCLDYFDMYSPITRITSIRMLIEIVALYKFEINQIDVKTIFLND 1144
I++YKARLVAKG+ QK+ D+FD YSP+ R+T+IR LI + A Y I+Q+DVKT FLN
Sbjct: 867 IERYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRTLIAVAASYGLIIHQMDVKTAFLNG 926
Query: 1145 ELNEKIYIEQPERFIVK**EKKVSFCQIILWLKASAQSMTQ 1267
EL+E+IY++QPE FI E KV C++I L Q+ Q
Sbjct: 927 ELDEEIYMDQPEGFIADGQENKV--CRLIKSLYGLKQAPKQ 965
Score = 89.7 bits (221), Expect(4) = 4e-64
Identities = 53/116 (45%), Positives = 74/116 (63%), Gaps = 3/116 (2%)
Frame = +1
Query: 1375 CFYLDDMFIMGTSKNIIKSAKKMLTSNFDIKDLGVTDVILGIKVTRTLD-GLVLSQLHYI 1551
C Y+DD+ I G++ N+I+ K +L+SNF++KDLG DVIL IK+ R D G+ L Q HY+
Sbjct: 1001 CLYVDDILIFGSNLNVIEEVKNLLSSNFEMKDLGEADVILNIKLVREADGGVTLLQSHYV 1060
Query: 1552 EKMLKTFNKFDISSTKIPFDYHNHNLKKSIGRRIS--HLEYS*IIGSLMYVINYDR 1713
EK+L F D P+D + L+K+ RRI+ L YS IIGSLMY+ + R
Sbjct: 1061 EKVLSRFGFSDCDPAPTPYD-PSVLLRKN--RRIARDQLTYSQIIGSLMYLASATR 1113
Score = 32.7 bits (73), Expect(4) = 4e-64
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +3
Query: 1713 DIIYLIEKLSRNTSNLRVTHWEVLVKVLK--RCILDYRLHYT 1832
DI Y + KLSR S HW L +VL+ + + Y +HYT
Sbjct: 1115 DISYAVSKLSRFVSKPGDDHWRALERVLRYLKGTMTYGIHYT 1156
Score = 32.7 bits (73), Expect(4) = 4e-64
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +2
Query: 1886 FGGAVIL*KSSK*TCIAQSTIES*FINLDKASEEAKW 1996
FGG + KS K T + +ST+E+ LD A EA+W
Sbjct: 1187 FGGGAVSWKSCKQTILTKSTMEAELAALDTAGAEAEW 1223
>gb|ABF98943.1| retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group]
Length = 1460
Score = 152 bits (384), Expect(4) = 6e-64
Identities = 74/161 (45%), Positives = 113/161 (70%)
Frame = +2
Query: 785 PQSFKEAMFTPKALFWKEVVNNELEPIMQNHT*ELVSLPPGNIPIGCKWIFKRKMKSDDF 964
P+S EA +P A +WKE V +E++ I+ N T E+ P G P+GCKW+FK+K++ D
Sbjct: 791 PKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGT 850
Query: 965 IDKYKARLVAKGFKQKKCLDYFDMYSPITRITSIRMLIEIVALYKFEINQIDVKTIFLND 1144
I+KYKARLVAKG+ QK+ D+FD YSP+ R+T+IR+L+ + A + ++Q+DVKT FLN
Sbjct: 851 IEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNG 910
Query: 1145 ELNEKIYIEQPERFIVK**EKKVSFCQIILWLKASAQSMTQ 1267
EL+E+IY++QP+ F+++ E KV C+++ L Q+ Q
Sbjct: 911 ELDEEIYMDQPDGFVLEGQEGKV--CKLLKSLYGLKQAPKQ 949
Score = 96.7 bits (239), Expect(4) = 6e-64
Identities = 51/113 (45%), Positives = 71/113 (62%)
Frame = +1
Query: 1375 CFYLDDMFIMGTSKNIIKSAKKMLTSNFDIKDLGVTDVILGIKVTRTLDGLVLSQLHYIE 1554
C Y+DD+ I GT+ +I K L+ NFD+KDLGV DVIL IK+ R +G+ L Q HY+E
Sbjct: 985 CLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVE 1044
Query: 1555 KMLKTFNKFDISSTKIPFDYHNHNLKKSIGRRISHLEYS*IIGSLMYVINYDR 1713
K+L F D + P+D + +L+K+ + LEYS IIGSLMY+ + R
Sbjct: 1045 KILNRFGYIDSKPSPTPYD-PSLSLRKNKRIARNQLEYSQIIGSLMYLASATR 1096
Score = 35.4 bits (80), Expect(4) = 6e-64
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +3
Query: 1713 DIIYLIEKLSRNTSNLRVTHWEVLVKVLK--RCILDYRLHYTRYQLYL 1850
DI + + KLSR TSN HW L +V++ + ++ LHYT Y L
Sbjct: 1098 DISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVL 1145
Score = 31.2 bits (69), Expect(4) = 6e-64
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +2
Query: 1883 TFGGAVIL*KSSK*TCIAQSTIES*FINLDKASEEAKW 1996
T GG + +S K T + +ST+E+ LD A+ EA+W
Sbjct: 1169 TLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEW 1206
>gb|AAT77367.1| putative polyprotein [Oryza sativa Japonica Group]
gi|51854387|gb|AAU10767.1| hypothetical protein [Oryza
sativa Japonica Group]
Length = 1320
Score = 153 bits (387), Expect(4) = 6e-64
Identities = 75/161 (46%), Positives = 113/161 (70%)
Frame = +2
Query: 785 PQSFKEAMFTPKALFWKEVVNNELEPIMQNHT*ELVSLPPGNIPIGCKWIFKRKMKSDDF 964
P+S EA +P A +WKE V +E++ I+ N T E+ P G P+GCKW+FK+K++ D
Sbjct: 791 PKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGT 850
Query: 965 IDKYKARLVAKGFKQKKCLDYFDMYSPITRITSIRMLIEIVALYKFEINQIDVKTIFLND 1144
I+KYKARLVAKG+ QK+ D+FD YSP+ R+T+IR+L+ + A + ++Q+DVKT FLN
Sbjct: 851 IEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNG 910
Query: 1145 ELNEKIYIEQPERFIVK**EKKVSFCQIILWLKASAQSMTQ 1267
EL+E+IY++QP+ F+V+ E KV C+++ L Q+ Q
Sbjct: 911 ELDEEIYMDQPDGFVVEGQEGKV--CKLLKSLYGLKQAPKQ 949
Score = 95.1 bits (235), Expect(4) = 6e-64
Identities = 51/113 (45%), Positives = 70/113 (61%)
Frame = +1
Query: 1375 CFYLDDMFIMGTSKNIIKSAKKMLTSNFDIKDLGVTDVILGIKVTRTLDGLVLSQLHYIE 1554
C Y+DD+ I GT+ +I K L+ NFD+KDLGV DVIL IK+ R +G+ L Q HY+E
Sbjct: 985 CLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVE 1044
Query: 1555 KMLKTFNKFDISSTKIPFDYHNHNLKKSIGRRISHLEYS*IIGSLMYVINYDR 1713
K+L F D + P+D + L+K+ + LEYS IIGSLMY+ + R
Sbjct: 1045 KILNRFGYIDSKPSPTPYD-PSLLLRKNKRIARNQLEYSQIIGSLMYLASATR 1096
Score = 35.8 bits (81), Expect(4) = 6e-64
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +3
Query: 1713 DIIYLIEKLSRNTSNLRVTHWEVLVKVLK--RCILDYRLHYTRYQLYL 1850
DI + + KLSR TSN HW L +V++ + ++ LHYT Y L
Sbjct: 1098 DISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTMELGLHYTGYPAVL 1145
Score = 31.2 bits (69), Expect(4) = 6e-64
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +2
Query: 1883 TFGGAVIL*KSSK*TCIAQSTIES*FINLDKASEEAKW 1996
T GG + +S K T + +ST+E+ LD A+ EA+W
Sbjct: 1169 TLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEW 1206