BLASTX nr result

ID: Akebia26_contig00028679 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia26_contig00028679
         (1728 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006828249.1| hypothetical protein AMTR_s00023p00196820 [A...   939   0.0  
ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s...   899   0.0  
ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group] g...   881   0.0  
ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III s...   868   0.0  
ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [S...   867   0.0  
gb|ACJ63311.1| RNA polymerase III large subunit [Papaver orientale]   866   0.0  
ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III s...   866   0.0  
ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III s...   864   0.0  
ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III s...   864   0.0  
gb|ACJ63308.1| RNA polymerase III large subunit [Drimys winteri]      861   0.0  
ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III s...   860   0.0  
gb|ACJ63310.1| RNA polymerase III large subunit [Liriodendron tu...   860   0.0  
gb|EXB53229.1| DNA-directed RNA polymerase III subunit RPC1 [Mor...   859   0.0  
ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III s...   857   0.0  
ref|XP_004294640.1| PREDICTED: DNA-directed RNA polymerase III s...   853   0.0  
ref|XP_003574945.1| PREDICTED: DNA-directed RNA polymerase III s...   845   0.0  
gb|AAS79695.1| RNA polymerase III large subunit [Cycas revoluta]      840   0.0  
gb|AAS79696.1| RNA polymerase III large subunit [Zamia muricata]      839   0.0  
ref|XP_003570766.1| PREDICTED: DNA-directed RNA polymerase III s...   838   0.0  
emb|CBI16226.3| unnamed protein product [Vitis vinifera]              833   0.0  

>ref|XP_006828249.1| hypothetical protein AMTR_s00023p00196820 [Amborella trichopoda]
            gi|548832896|gb|ERM95665.1| hypothetical protein
            AMTR_s00023p00196820 [Amborella trichopoda]
          Length = 1383

 Score =  939 bits (2426), Expect = 0.0
 Identities = 459/575 (79%), Positives = 509/575 (88%)
 Frame = -3

Query: 1726 ADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDT 1547
            ADFDGDEMN+HVPQTEEARTEALMLMGVQ+NLCTPKNGEILVASTQDFLTSS+LITRKDT
Sbjct: 492  ADFDGDEMNIHVPQTEEARTEALMLMGVQHNLCTPKNGEILVASTQDFLTSSYLITRKDT 551

Query: 1546 FYDRAAFSLMCSYMGDAMDHVDLPTPALIKPIELWTGKQLFSVLVRPSANMRVYLNLTVL 1367
            FYDRA FSLMCSYMGD M+++DLPTPAL+KP+ELWTGKQLFSVL+RP A+M+VY+NL+++
Sbjct: 552  FYDRATFSLMCSYMGDGMENIDLPTPALLKPVELWTGKQLFSVLIRPHAHMKVYVNLSLM 611

Query: 1366 EKNYSKSGETMCPNDGFVYFRNSELVCGQLGKATLGNGNKDGLFSVLLRDYNAHAAASCM 1187
            EKNYSK GETMC NDGFVY RNSEL+ GQLGKATLGNGNKDGLFSVLLRDYN+HAAASCM
Sbjct: 612  EKNYSKGGETMCANDGFVYIRNSELISGQLGKATLGNGNKDGLFSVLLRDYNSHAAASCM 671

Query: 1186 NRLAKLSARWIGNHGFSIGIDDVQPRGNLNREKKYSIEKGYEACDKLIQSYDKGQLKLQP 1007
            NRLAKLSARWIGNHGFSIGIDDV P  +L ++K+  I+ GY  CD  I +YDKG+L L+P
Sbjct: 672  NRLAKLSARWIGNHGFSIGIDDVLPGSHLTKQKEEQIKGGYSNCDAFIDAYDKGKLSLKP 731

Query: 1006 GCDAAQTLEAEITGVLNGIREATAKVCMDELHWRNSPLIMSQCGSKGSPINISQMIACVG 827
            GC+AAQTLEAEIT VLNGIR+A AKVCM+ELHWRNSPLIMSQCGSKGSPINISQMIACVG
Sbjct: 732  GCNAAQTLEAEITRVLNGIRDAAAKVCMEELHWRNSPLIMSQCGSKGSPINISQMIACVG 791

Query: 826  QQSVGGRRAPNGFIDRSLPHFPRKSKTPAAKGFVANSFYTGLTATEFFFHTMGGREGLVD 647
            QQSVGGRRAPNGFIDRSLPHFPR  KTPAAKGFVANSFYTGLTA EFFFHTMGGREGLVD
Sbjct: 792  QQSVGGRRAPNGFIDRSLPHFPRNDKTPAAKGFVANSFYTGLTAAEFFFHTMGGREGLVD 851

Query: 646  TAVKTADTGYMSRRLIKALEDLSIHYDDTVRNSSGGVIQFHYGDDGMDPAQMEGKNGVPL 467
            TAVKTADTGY+SRRLIK+LEDLS HYDDTVRNSSG +IQF YGDDGMDPA+MEGK+GVPL
Sbjct: 852  TAVKTADTGYLSRRLIKSLEDLSTHYDDTVRNSSGTIIQFSYGDDGMDPAKMEGKSGVPL 911

Query: 466  NLDRLYLKIKATCPSSTHANLSPSEVLEIVNNRLSRHDMTPEGGCSDAFKKSLLDFFHKR 287
            NLDRL++KIKATCP+S  A+LSPSE+  IVN+RLS+HDMTPE GCS AFK+ L +F  KR
Sbjct: 912  NLDRLFMKIKATCPASVSASLSPSEISTIVNDRLSKHDMTPERGCSMAFKEELSNFIKKR 971

Query: 286  ITTMKNTRRLLQLDEEHVDKNNSVFLEKVAANISGVTSQQLQVFLETCISRYHLKKXXXX 107
            +  +K TR +L LDE+ VDK     LE VAANISG++ QQL+VFLETCISRYHLK+    
Sbjct: 972  MDAIKKTRNMLGLDEDCVDKEKFSGLEHVAANISGISRQQLRVFLETCISRYHLKRIEAG 1031

Query: 106  XXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNITL 2
                       GEPGTQMTLKTFHFAGVASMNITL
Sbjct: 1032 TAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNITL 1066


>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Vitis
            vinifera]
          Length = 1383

 Score =  899 bits (2323), Expect = 0.0
 Identities = 451/577 (78%), Positives = 498/577 (86%), Gaps = 2/577 (0%)
 Frame = -3

Query: 1726 ADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDT 1547
            ADFDGDEMN+HVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDT
Sbjct: 496  ADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDT 555

Query: 1546 FYDRAAFSLMCSYMGDAMDHVDLPTPALIKPIELWTGKQLFSVLVRPSANMRVYLNLTVL 1367
            FYDRAAFSLMCSYMGD MD VDLPTPA+IKP+ELWTGKQLF+VL+RP AN+RVYLNLTV+
Sbjct: 556  FYDRAAFSLMCSYMGDGMDLVDLPTPAIIKPVELWTGKQLFNVLLRPHANVRVYLNLTVM 615

Query: 1366 EKNYSK--SGETMCPNDGFVYFRNSELVCGQLGKATLGNGNKDGLFSVLLRDYNAHAAAS 1193
            EK Y+K    ETMCP+DGFVYFRNSEL+ GQLGKATLGNGNKDGLFSVLLRDYNAHAAA+
Sbjct: 616  EKTYNKRRGKETMCPSDGFVYFRNSELISGQLGKATLGNGNKDGLFSVLLRDYNAHAAAA 675

Query: 1192 CMNRLAKLSARWIGNHGFSIGIDDVQPRGNLNREKKYSIEKGYEACDKLIQSYDKGQLKL 1013
            CMNRLAKLSARWIGNHGFSIGIDDVQP G LN +K   IE+GYE C +LIQ Y+KG+LKL
Sbjct: 676  CMNRLAKLSARWIGNHGFSIGIDDVQPGGLLNDQKSKRIEEGYENCHELIQQYNKGKLKL 735

Query: 1012 QPGCDAAQTLEAEITGVLNGIREATAKVCMDELHWRNSPLIMSQCGSKGSPINISQMIAC 833
            QPGC+AAQTLEAEITGVLN IRE TA VCM+ELHWRNSPLIMSQCGSKGSPINISQMIAC
Sbjct: 736  QPGCNAAQTLEAEITGVLNKIRETTANVCMEELHWRNSPLIMSQCGSKGSPINISQMIAC 795

Query: 832  VGQQSVGGRRAPNGFIDRSLPHFPRKSKTPAAKGFVANSFYTGLTATEFFFHTMGGREGL 653
            VGQQSVGGRRAP+GFIDR+LPHFPRKSKTP AKGFVA+SFYTGLTATEFFFHTMGGREGL
Sbjct: 796  VGQQSVGGRRAPDGFIDRTLPHFPRKSKTPDAKGFVASSFYTGLTATEFFFHTMGGREGL 855

Query: 652  VDTAVKTADTGYMSRRLIKALEDLSIHYDDTVRNSSGGVIQFHYGDDGMDPAQMEGKNGV 473
            VDTAVKTADTGYMSRRL+KALEDLSI YD+TVRN++G ++QF YGDDGMDPA+MEGK+G 
Sbjct: 856  VDTAVKTADTGYMSRRLMKALEDLSIQYDETVRNANGSIVQFLYGDDGMDPARMEGKDGF 915

Query: 472  PLNLDRLYLKIKATCPSSTHANLSPSEVLEIVNNRLSRHDMTPEGGCSDAFKKSLLDFFH 293
            PLN +RL+LK+KATCP+  +A+LS  ++ E V  RL  H+ + E GCSDAFK +L  F  
Sbjct: 916  PLNFNRLFLKVKATCPAGENASLSALQIEETV-KRLKEHNTSAE-GCSDAFKTNLSGFLE 973

Query: 292  KRITTMKNTRRLLQLDEEHVDKNNSVFLEKVAANISGVTSQQLQVFLETCISRYHLKKXX 113
            +     KNTR  L L  EHV + N    EK A NISG+TS+QLQVFL+TCISRY LK+  
Sbjct: 974  ECKEKFKNTREALGLHGEHVGEENLDIQEKFAKNISGITSKQLQVFLDTCISRYQLKRIE 1033

Query: 112  XXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNITL 2
                         GEPGTQMTLKTFHFAGVASMN+TL
Sbjct: 1034 AGTAIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 1070


>ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group]
            gi|38346223|emb|CAE02045.2| OJ990528_30.3 [Oryza sativa
            Japonica Group] gi|38347455|emb|CAD41360.2|
            OSJNBa0076N16.24 [Oryza sativa Japonica Group]
            gi|113564746|dbj|BAF15089.1| Os04g0492300 [Oryza sativa
            Japonica Group] gi|116310339|emb|CAH67354.1|
            OSIGBa0130B08.14 [Oryza sativa Indica Group]
            gi|116310740|emb|CAH67535.1| H0425E08.3 [Oryza sativa
            Indica Group] gi|215768005|dbj|BAH00234.1| unnamed
            protein product [Oryza sativa Japonica Group]
            gi|218195112|gb|EEC77539.1| hypothetical protein
            OsI_16437 [Oryza sativa Indica Group]
          Length = 1383

 Score =  881 bits (2276), Expect = 0.0
 Identities = 432/581 (74%), Positives = 492/581 (84%), Gaps = 6/581 (1%)
 Frame = -3

Query: 1726 ADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDT 1547
            ADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFL+TRKD 
Sbjct: 486  ADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLVTRKDN 545

Query: 1546 FYDRAAFSLMCSYMGDAMDHVDLPTPALIKPIELWTGKQLFSVLVRPSANMRVYLNLTVL 1367
            FYDR++FSL+CSY+GDAM+++DLPTPALIKPIELWTGKQLFSVLVRP+A  +V+LNLTV 
Sbjct: 546  FYDRSSFSLLCSYLGDAMENIDLPTPALIKPIELWTGKQLFSVLVRPNACTKVFLNLTVK 605

Query: 1366 EKNYSK------SGETMCPNDGFVYFRNSELVCGQLGKATLGNGNKDGLFSVLLRDYNAH 1205
            EK Y          E MCPNDGFVYFRNSEL+ GQ+GKATLGNGNKDG+FS L+RDYN+H
Sbjct: 606  EKIYKTPKGSTLEPEAMCPNDGFVYFRNSELLSGQVGKATLGNGNKDGMFSTLVRDYNSH 665

Query: 1204 AAASCMNRLAKLSARWIGNHGFSIGIDDVQPRGNLNREKKYSIEKGYEACDKLIQSYDKG 1025
            AAASCMNRLAK SAR+IGNHGFSIG+DDVQP  +LN+EKK  I+ GY+ C  LI SY KG
Sbjct: 666  AAASCMNRLAKFSARFIGNHGFSIGVDDVQPGEHLNQEKKMKIDGGYKDCHDLIASYSKG 725

Query: 1024 QLKLQPGCDAAQTLEAEITGVLNGIREATAKVCMDELHWRNSPLIMSQCGSKGSPINISQ 845
             L+LQPGC+AAQTLE  IT VLN IRE   KVCM+ LHWRNSPLIMSQCGSKGSPINISQ
Sbjct: 726  ALRLQPGCNAAQTLEQSITRVLNEIREEAGKVCMNTLHWRNSPLIMSQCGSKGSPINISQ 785

Query: 844  MIACVGQQSVGGRRAPNGFIDRSLPHFPRKSKTPAAKGFVANSFYTGLTATEFFFHTMGG 665
            M+ACVGQQSVGGRRAPNGFIDR+LPHFP  SKTPAAKGFVANSFYTGLTATEFFFHTMGG
Sbjct: 786  MVACVGQQSVGGRRAPNGFIDRTLPHFPINSKTPAAKGFVANSFYTGLTATEFFFHTMGG 845

Query: 664  REGLVDTAVKTADTGYMSRRLIKALEDLSIHYDDTVRNSSGGVIQFHYGDDGMDPAQMEG 485
            REGLVDTAVKTA+TGYMSRRL+K LEDLS+ YD TVRN+SGG++QF YGDDGMDPA+MEG
Sbjct: 846  REGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQTVRNASGGIVQFLYGDDGMDPAKMEG 905

Query: 484  KNGVPLNLDRLYLKIKATCPSSTHANLSPSEVLEIVNNRLSRHDMTPEGGCSDAFKKSLL 305
            K+G PLNLD+L++K+ ATCP      LSP E+L+I+N++LS HD + + GCS+ FK+ L 
Sbjct: 906  KDGKPLNLDQLFMKVMATCPQRGQNTLSPGEILQILNDKLSEHDASSDDGCSEKFKQLLT 965

Query: 304  DFFHKRITTMKNTRRLLQLDEEHVDKNNSVFLEKVAANISGVTSQQLQVFLETCISRYHL 125
             F   RI  +K+TRR L LDE+HV + +S F E +AANISG++ +QLQVFL+TC+SRYHL
Sbjct: 966  YFLEDRIKLLKSTRRALLLDEDHVGERHSSFEESIAANISGISVKQLQVFLDTCLSRYHL 1025

Query: 124  KKXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNITL 2
            KK               GEPGTQMTLKTFHFAGVASMN+TL
Sbjct: 1026 KKIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTL 1066


>ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Oryza
            brachyantha]
          Length = 1389

 Score =  868 bits (2242), Expect = 0.0
 Identities = 425/592 (71%), Positives = 495/592 (83%), Gaps = 17/592 (2%)
 Frame = -3

Query: 1726 ADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDT 1547
            ADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFL+TRKD 
Sbjct: 486  ADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLVTRKDN 545

Query: 1546 FYDRAAFSLMCSYMGDAMDHVDLPTPALIKPIELWTGKQLFSVLVRPSANMRVYLNLTVL 1367
            FYDR++F+L+CSY+GDAM+++DLPTPAL+KPIELWTGKQLFSVLVRP+A  +V+LNLTV 
Sbjct: 546  FYDRSSFTLLCSYLGDAMENIDLPTPALVKPIELWTGKQLFSVLVRPNACTKVFLNLTVK 605

Query: 1366 EKNYSKSGETMCPNDGFVYFRNSELVCGQLGKATLGNGNKDGLFSVLLRDYNAHAAASCM 1187
            EK YSKS ETMCPNDGFVYFRNSEL+ GQ+GK TLGNGNKDG+FS+L+RDYN+HAAASCM
Sbjct: 606  EKIYSKSRETMCPNDGFVYFRNSELLSGQVGKKTLGNGNKDGMFSILVRDYNSHAAASCM 665

Query: 1186 NRLAKLSARWIGNHGFSIGIDDVQPRGNLNREKKYSIEKGYEACDKLIQSYDKGQLKLQP 1007
            NRLAK SAR+IGNHGFSIG+DDV+P  +L+++KK  I++GY+ C  LI S+ KG L LQP
Sbjct: 666  NRLAKFSARFIGNHGFSIGVDDVRPGEHLDQQKKKKIDEGYKECHDLITSFSKGALTLQP 725

Query: 1006 GCDAAQTLEAEITGVLNGIREATAKVCMDELHWRNSPLIMSQCGSKGSPINISQMIACVG 827
            GC+AAQTLE +IT VLN IREA   +CMD LHWRNSPLIMSQCGSKGSPINISQM+ CVG
Sbjct: 726  GCNAAQTLEHKITHVLNKIREAAGNICMDTLHWRNSPLIMSQCGSKGSPINISQMVVCVG 785

Query: 826  QQSVGGRRAPNGFIDRSLPHFPRKSKTPAAKGFVANSFYTGLT----------------- 698
            QQSVGG RAPNGFIDR+LPHFP  SKTPAAKGFVANSFY GLT                 
Sbjct: 786  QQSVGGHRAPNGFIDRTLPHFPINSKTPAAKGFVANSFYNGLTATEFFFHTMGGIYIVLP 845

Query: 697  ATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDDTVRNSSGGVIQFHYG 518
            ATEFFFHTMGGREGLVDTAVKTA+TGYMSRRL+K LEDLS+ YD TVRN+SGG++QF YG
Sbjct: 846  ATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQTVRNASGGIVQFLYG 905

Query: 517  DDGMDPAQMEGKNGVPLNLDRLYLKIKATCPSSTHANLSPSEVLEIVNNRLSRHDMTPEG 338
            DDGMDPA+MEG++G PLNLD+L++K+ ATCP      LSP E+L+I+N++LS HD + + 
Sbjct: 906  DDGMDPAKMEGEDGKPLNLDQLFMKVMATCPQRGQNTLSPGEILQILNDKLSEHDASSDD 965

Query: 337  GCSDAFKKSLLDFFHKRITTMKNTRRLLQLDEEHVDKNNSVFLEKVAANISGVTSQQLQV 158
            GCS+ FK+ L DF   RI  +K+TRR L LDE HV K++S+  E +AANISG++++QLQV
Sbjct: 966  GCSEKFKQLLKDFLEDRIKLLKSTRRALCLDENHVGKDSSI-EESIAANISGISAKQLQV 1024

Query: 157  FLETCISRYHLKKXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNITL 2
            FL+TC+SRYH KK               GEPGTQMTLKTFHFAGVASMN+TL
Sbjct: 1025 FLDTCLSRYHSKKIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTL 1076


>ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [Sorghum bicolor]
            gi|241937900|gb|EES11045.1| hypothetical protein
            SORBIDRAFT_06g021120 [Sorghum bicolor]
          Length = 1391

 Score =  867 bits (2239), Expect = 0.0
 Identities = 426/588 (72%), Positives = 491/588 (83%), Gaps = 13/588 (2%)
 Frame = -3

Query: 1726 ADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDT 1547
            ADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFL+TRKDT
Sbjct: 486  ADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLVTRKDT 545

Query: 1546 FYDRAAFSLMCSYMGDAMDHVDLPTPALIKPIELWTGKQLFSVLVRPSANMRVYLNLTVL 1367
            FYDR++F+L+CSY+GDAM+++DLPTPALIKPIELWTGKQLFSVLVRP+A+ RV+LNL V 
Sbjct: 546  FYDRSSFTLLCSYLGDAMENIDLPTPALIKPIELWTGKQLFSVLVRPNAHTRVFLNLAVQ 605

Query: 1366 EKNYSKSG-------------ETMCPNDGFVYFRNSELVCGQLGKATLGNGNKDGLFSVL 1226
            EK YSK               ETMCPNDG+VYFRNSEL+ GQ+GKATLGNGNKDGL+SVL
Sbjct: 606  EKIYSKKKGKKEAGEETMCGRETMCPNDGYVYFRNSELLSGQVGKATLGNGNKDGLYSVL 665

Query: 1225 LRDYNAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPRGNLNREKKYSIEKGYEACDKL 1046
            LRDYN+HAAASCMNRLAK SAR+IGNHGFSIG+DDVQP  +LNR+KK  I+ GY+ C  L
Sbjct: 666  LRDYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVQPGEHLNRQKKKEIDGGYKKCHDL 725

Query: 1045 IQSYDKGQLKLQPGCDAAQTLEAEITGVLNGIREATAKVCMDELHWRNSPLIMSQCGSKG 866
            I  + KG L L PGC+AAQTLE  ITGVLN IR     VCMD LHWRNSPLIMSQCGSKG
Sbjct: 726  ISLFAKGALALHPGCNAAQTLEHNITGVLNEIRSIAGNVCMDTLHWRNSPLIMSQCGSKG 785

Query: 865  SPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRKSKTPAAKGFVANSFYTGLTATEF 686
            SPINISQM+ACVGQQSVGGRRAP+GF++R+LPHFP  SKTPAAKGFVANSFYTGLTATEF
Sbjct: 786  SPINISQMVACVGQQSVGGRRAPDGFLNRTLPHFPINSKTPAAKGFVANSFYTGLTATEF 845

Query: 685  FFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDDTVRNSSGGVIQFHYGDDGM 506
            FFHTMGGREGLVDTAVKTA+TGYMSRRL+K LEDLS+ YD TVRN+SGG++QF YGDDGM
Sbjct: 846  FFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQTVRNASGGIVQFLYGDDGM 905

Query: 505  DPAQMEGKNGVPLNLDRLYLKIKATCPSSTHANLSPSEVLEIVNNRLSRHDMTPEGGCSD 326
            DPA+MEGK+G+PLNLD+L++K+ ATCP      LSP  + +++ ++L +HD + +GGCS+
Sbjct: 906  DPAKMEGKDGMPLNLDQLFMKVMATCPQRGSDTLSPEAIKQMLEDKLLQHDTSSDGGCSE 965

Query: 325  AFKKSLLDFFHKRITTMKNTRRLLQLDEEHVDKNNSVFLEKVAANISGVTSQQLQVFLET 146
             FKK+L +F  KRI  MK TRR L L E+HV+K +S   E VAA ISG++++QLQVFL+T
Sbjct: 966  EFKKNLTEFLDKRIELMKCTRRALHLHEDHVEKKDSCVEESVAAIISGISAKQLQVFLDT 1025

Query: 145  CISRYHLKKXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNITL 2
            C+SRY  KK               GEPGTQMTLKTFHFAGVASMN+TL
Sbjct: 1026 CLSRYQSKKIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTL 1073


>gb|ACJ63311.1| RNA polymerase III large subunit [Papaver orientale]
          Length = 554

 Score =  866 bits (2238), Expect = 0.0
 Identities = 429/537 (79%), Positives = 474/537 (88%), Gaps = 11/537 (2%)
 Frame = -3

Query: 1699 LHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSL 1520
            +HVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITR+DTFYDRA+FSL
Sbjct: 1    MHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRRDTFYDRASFSL 60

Query: 1519 MCSYMGDAMDHVDLPTPALIKPIELWTGKQLFSVLVRPSANMRVYLNLTVLEKNYSKSGE 1340
            MCSYMGDAMD +DLPTPALIKP+ELWTGKQLF+VL+RP A MRV++NLTV EK+Y K  E
Sbjct: 61   MCSYMGDAMDAIDLPTPALIKPVELWTGKQLFNVLIRPHAQMRVFVNLTVFEKSYIKGRE 120

Query: 1339 TMCPNDGFVYFRNSELVCGQLGKATLGNGNKDGLFSVLLRDYNAHAAASCMNRLAKLSAR 1160
            T+CPNDGFVYFRNSEL+CGQLGKATLGNGNKDGLFSVLLRDY+AHAAASCMNRLAKLSAR
Sbjct: 121  TLCPNDGFVYFRNSELICGQLGKATLGNGNKDGLFSVLLRDYDAHAAASCMNRLAKLSAR 180

Query: 1159 WIGNHGFSIGIDDVQPRGNLNREKKYSIEKGYEACDKLIQSYDKGQLKLQPGCDAAQTLE 980
            WIGN GFSIGI DVQP  +L+ +K+  I+KG E CDKLI+ Y  G+L+LQPGCDAAQTLE
Sbjct: 181  WIGNQGFSIGISDVQPGKSLSDKKQKKIDKGKEKCDKLIEHYKTGKLELQPGCDAAQTLE 240

Query: 979  AEITGVLNGIREATAKVCMDELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRA 800
            AEITG+ N IRE  A VCM+ LHWRNSPLIMSQCGSKGSP NI+QMIACVGQQSVGGRRA
Sbjct: 241  AEITGIQNNIREKAATVCMENLHWRNSPLIMSQCGSKGSPSNITQMIACVGQQSVGGRRA 300

Query: 799  PNGFIDRSLPHFPRKSKTPAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTADTG 620
             NGFIDRSLPHFPR S TP AKGFV NSFYTGLTATEFFFHTMGGREGLVDTAVKTADTG
Sbjct: 301  MNGFIDRSLPHFPRNSVTPDAKGFVENSFYTGLTATEFFFHTMGGREGLVDTAVKTADTG 360

Query: 619  YMSRRLIKALEDLSIHYDDTVRNSSGGVIQFHYGDDGMDPAQMEGKNGVPLNLDRLYLKI 440
            YMSRRLIKALEDLSIHYD TVR++SGGV+QF YGDDGMDP++MEGK+G PLNLDRLY+K+
Sbjct: 361  YMSRRLIKALEDLSIHYDSTVRSASGGVVQFLYGDDGMDPSRMEGKDGTPLNLDRLYMKV 420

Query: 439  KATCPSSTHANLSPSEVLEIVNNRLSRHDMTPEGGCSDAFKKSLLD-----------FFH 293
            KATCP+  H++LSP+E+L++V  RLS+HDMTPEGGCSDAFKKSLLD           F  
Sbjct: 421  KATCPARGHSSLSPAEILKLVVARLSKHDMTPEGGCSDAFKKSLLDEEGFMQNKEGGFLG 480

Query: 292  KRITTMKNTRRLLQLDEEHVDKNNSVFLEKVAANISGVTSQQLQVFLETCISRYHLK 122
            K IT++KNTRR LQLD     K  S  LEKV+ANI+G+T QQLQVFLETCISRYHLK
Sbjct: 481  KCITSLKNTRRDLQLDGV---KKGSESLEKVSANIAGITLQQLQVFLETCISRYHLK 534


>ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Cucumis
            sativus]
          Length = 1400

 Score =  866 bits (2237), Expect = 0.0
 Identities = 438/590 (74%), Positives = 484/590 (82%), Gaps = 15/590 (2%)
 Frame = -3

Query: 1726 ADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDT 1547
            ADFDGDEMN+HVPQTEEARTEA++LMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDT
Sbjct: 492  ADFDGDEMNMHVPQTEEARTEAILLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDT 551

Query: 1546 FYDRAAFSLMCSYMGDAMDHVDLPTPALIKPIELWTGKQLFSVLVRPSANMRVYLNLTVL 1367
            FYDRAAFSLMCSYMGD MD VDLPTPAL+KPIELWTGKQLFSVLVRP A+M+VYLNLTV 
Sbjct: 552  FYDRAAFSLMCSYMGDGMDLVDLPTPALVKPIELWTGKQLFSVLVRPHASMKVYLNLTVK 611

Query: 1366 EKNYSK------SGETMCPNDGFVYFRNSELVCGQLGKATLGNGNKDGLFSVLLRDYNAH 1205
            EK+YSK        ETMCPNDGFVYFRNSEL+ GQ+GKATLGNGNKDGL+SVLLRDY AH
Sbjct: 612  EKSYSKVKGNEKERETMCPNDGFVYFRNSELISGQVGKATLGNGNKDGLYSVLLRDYKAH 671

Query: 1204 AAASCMNRLAKLSARWIGNHGFSIGIDDVQPRGNLNREKKYSIEKGYEACDKLIQSYDKG 1025
            AAA CMNRLAKLSARWIGNHGFSIGIDDVQP   L ++K+ +I +GY  CDK I  ++ G
Sbjct: 672  AAAVCMNRLAKLSARWIGNHGFSIGIDDVQPGDQLVKKKQTTILEGYRDCDKQINLFNTG 731

Query: 1024 QLKLQPGCDAAQTLEAEITGVLNGIREATAKVCMDELHWRNSPLIMSQCGSKGSPINISQ 845
             L  + GCDAAQ+LE++IT +LNGIREATA VCM  LHWRNSPLIMSQCGSKGSPINISQ
Sbjct: 732  NLPPEAGCDAAQSLESKITQILNGIREATANVCMQNLHWRNSPLIMSQCGSKGSPINISQ 791

Query: 844  MIACVGQQSVGGRRAPNGFIDRSLPHFPRKSKTPAAKGFVANSFYTGLTATEFFFHTMGG 665
            M+ACVGQQSVGGRRAP+GFIDRSLPHF RK+KTPAAKGFVANSFY+GLTATEFFFHTMGG
Sbjct: 792  MVACVGQQSVGGRRAPDGFIDRSLPHFRRKAKTPAAKGFVANSFYSGLTATEFFFHTMGG 851

Query: 664  REGLVDTAVKTADTGYMSRRLIKALEDLSIHYDDTVRNSSGGVIQFHYGDDGMDPAQMEG 485
            REGLVDTAVKTADTGYMSRRLIKALEDLSIHYD +VRN+ G ++QF YGDDGMDPAQMEG
Sbjct: 852  REGLVDTAVKTADTGYMSRRLIKALEDLSIHYDSSVRNAGGCIVQFCYGDDGMDPAQMEG 911

Query: 484  KNGVPLNLDRLYLKIKATCPSSTHANLSPSEVLEIVNNRLSRHDMTPEGGCSDAFKKSLL 305
            K+G PLN +RL+LK KATCPS  +  LSPSE  E V +RLS+ D +PE GCS AF  SL 
Sbjct: 912  KSGAPLNFERLFLKAKATCPSDGNKILSPSEFSETVEDRLSKDDASPECGCSPAFVGSLK 971

Query: 304  DFFHKRITTMKNTRRLLQLDEEHV---------DKNNSVFLEKVAANISGVTSQQLQVFL 152
             F +K +   K +   L  D E           D +N V   KV  NI+GVT +QLQVFL
Sbjct: 972  IFLNKYVEAQKKSWGTLLADNESAVDKSIISSSDNDNIVIRNKVVQNIAGVTHRQLQVFL 1031

Query: 151  ETCISRYHLKKXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNITL 2
            +TC+SRYH KK               GEPGTQMTLKTFHFAGVASMN+TL
Sbjct: 1032 DTCLSRYHTKKIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTL 1081


>ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
            X2 [Solanum tuberosum]
          Length = 1243

 Score =  864 bits (2233), Expect = 0.0
 Identities = 424/576 (73%), Positives = 486/576 (84%), Gaps = 1/576 (0%)
 Frame = -3

Query: 1726 ADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDT 1547
            ADFDGDEMN+HVPQTEEARTEALMLMGVQNNLCTPK+GEILVASTQDFLTSSFLITRKDT
Sbjct: 493  ADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKSGEILVASTQDFLTSSFLITRKDT 552

Query: 1546 FYDRAAFSLMCSYMGDAMDHVDLPTPALIKPIELWTGKQLFSVLVRPSANMRVYLNLTVL 1367
            FY+RA+FSL+CSYMGDAMD  DLP+PA IKP+ELWTGKQLF +L+RP + MRVY+NLTV 
Sbjct: 553  FYNRASFSLICSYMGDAMDPTDLPSPAFIKPVELWTGKQLFHMLLRPYSKMRVYVNLTVT 612

Query: 1366 EKNYSKSGETMCPNDGFVYFRNSELVCGQLGKATLGNGNKDGLFSVLLRDYNAHAAASCM 1187
            EK+YS  GETMCP+DGFVYFRNSEL+ GQLGKATLGNGNKDGL+SVLLRDY +HAAA+CM
Sbjct: 613  EKSYSGKGETMCPSDGFVYFRNSELISGQLGKATLGNGNKDGLYSVLLRDYKSHAAATCM 672

Query: 1186 NRLAKLSARWIGNHGFSIGIDDVQPRGNLNREKKYSIEKGYEACDKLIQSYDKGQLKLQP 1007
            NRLAKLSARWIGNHGFSIGIDDV P  NL ++K+  I + Y+ C+  I  +++G+L +QP
Sbjct: 673  NRLAKLSARWIGNHGFSIGIDDVTPGENLVKQKQGEIHRNYKKCEDCITQFNEGKLAVQP 732

Query: 1006 GCDAAQTLEAEITGVLNGIREATAKVCMDELHWRNSPLIMSQCGSKGSPINISQMIACVG 827
            GCDAAQTLEAE+T  LN +R+   K+CM  L WRNSPLIMSQCGSKGSPINISQMIACVG
Sbjct: 733  GCDAAQTLEAEVTMSLNKVRDDIGKICMKALDWRNSPLIMSQCGSKGSPINISQMIACVG 792

Query: 826  QQSVGGRRAPNGFIDRSLPHFPRKSKTPAAKGFVANSFYTGLTATEFFFHTMGGREGLVD 647
            QQSVGGRRAP+GFIDRSLPHFP KSK PAAKGFVA+SF+ GL+ATEFFFHTMGGREGLVD
Sbjct: 793  QQSVGGRRAPDGFIDRSLPHFPFKSKFPAAKGFVAHSFFDGLSATEFFFHTMGGREGLVD 852

Query: 646  TAVKTADTGYMSRRLIKALEDLSIHYDDTVRNSSGGVIQFHYGDDGMDPAQMEGKNGVPL 467
            TAVKTADTGYMSRRL+KALEDL+++YD TVRN+S  ++QF YGDDGMDP+QME K G PL
Sbjct: 853  TAVKTADTGYMSRRLMKALEDLAVYYDSTVRNASACIVQFMYGDDGMDPSQMEEKKGRPL 912

Query: 466  NLDRLYLKIKATCPSSTHANLSPSEVLEIVNNRLSRHDMTPEGGCSDAFKKSLLDFFHKR 287
            N  RL++K+KATCP     +LS SE+ EIVN RLS HDMTPEGGCS+AF+ SL DF  K 
Sbjct: 913  NFSRLFMKVKATCPPGGEKSLSYSEICEIVNERLSYHDMTPEGGCSEAFRSSLSDFLIKN 972

Query: 286  IT-TMKNTRRLLQLDEEHVDKNNSVFLEKVAANISGVTSQQLQVFLETCISRYHLKKXXX 110
            +  T+KN R  L L EE  + ++  +LEK+A NISG+T +QLQVFL TCISRYHLK+   
Sbjct: 973  LAETLKNLRESLLLGEEQYEGDDRGYLEKIALNISGITKRQLQVFLNTCISRYHLKRLEA 1032

Query: 109  XXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNITL 2
                        GEPGTQMTLKTFHFAGVASMN+TL
Sbjct: 1033 GTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTL 1068


>ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
            X1 [Solanum tuberosum]
          Length = 1394

 Score =  864 bits (2233), Expect = 0.0
 Identities = 424/576 (73%), Positives = 486/576 (84%), Gaps = 1/576 (0%)
 Frame = -3

Query: 1726 ADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDT 1547
            ADFDGDEMN+HVPQTEEARTEALMLMGVQNNLCTPK+GEILVASTQDFLTSSFLITRKDT
Sbjct: 493  ADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKSGEILVASTQDFLTSSFLITRKDT 552

Query: 1546 FYDRAAFSLMCSYMGDAMDHVDLPTPALIKPIELWTGKQLFSVLVRPSANMRVYLNLTVL 1367
            FY+RA+FSL+CSYMGDAMD  DLP+PA IKP+ELWTGKQLF +L+RP + MRVY+NLTV 
Sbjct: 553  FYNRASFSLICSYMGDAMDPTDLPSPAFIKPVELWTGKQLFHMLLRPYSKMRVYVNLTVT 612

Query: 1366 EKNYSKSGETMCPNDGFVYFRNSELVCGQLGKATLGNGNKDGLFSVLLRDYNAHAAASCM 1187
            EK+YS  GETMCP+DGFVYFRNSEL+ GQLGKATLGNGNKDGL+SVLLRDY +HAAA+CM
Sbjct: 613  EKSYSGKGETMCPSDGFVYFRNSELISGQLGKATLGNGNKDGLYSVLLRDYKSHAAATCM 672

Query: 1186 NRLAKLSARWIGNHGFSIGIDDVQPRGNLNREKKYSIEKGYEACDKLIQSYDKGQLKLQP 1007
            NRLAKLSARWIGNHGFSIGIDDV P  NL ++K+  I + Y+ C+  I  +++G+L +QP
Sbjct: 673  NRLAKLSARWIGNHGFSIGIDDVTPGENLVKQKQGEIHRNYKKCEDCITQFNEGKLAVQP 732

Query: 1006 GCDAAQTLEAEITGVLNGIREATAKVCMDELHWRNSPLIMSQCGSKGSPINISQMIACVG 827
            GCDAAQTLEAE+T  LN +R+   K+CM  L WRNSPLIMSQCGSKGSPINISQMIACVG
Sbjct: 733  GCDAAQTLEAEVTMSLNKVRDDIGKICMKALDWRNSPLIMSQCGSKGSPINISQMIACVG 792

Query: 826  QQSVGGRRAPNGFIDRSLPHFPRKSKTPAAKGFVANSFYTGLTATEFFFHTMGGREGLVD 647
            QQSVGGRRAP+GFIDRSLPHFP KSK PAAKGFVA+SF+ GL+ATEFFFHTMGGREGLVD
Sbjct: 793  QQSVGGRRAPDGFIDRSLPHFPFKSKFPAAKGFVAHSFFDGLSATEFFFHTMGGREGLVD 852

Query: 646  TAVKTADTGYMSRRLIKALEDLSIHYDDTVRNSSGGVIQFHYGDDGMDPAQMEGKNGVPL 467
            TAVKTADTGYMSRRL+KALEDL+++YD TVRN+S  ++QF YGDDGMDP+QME K G PL
Sbjct: 853  TAVKTADTGYMSRRLMKALEDLAVYYDSTVRNASACIVQFMYGDDGMDPSQMEEKKGRPL 912

Query: 466  NLDRLYLKIKATCPSSTHANLSPSEVLEIVNNRLSRHDMTPEGGCSDAFKKSLLDFFHKR 287
            N  RL++K+KATCP     +LS SE+ EIVN RLS HDMTPEGGCS+AF+ SL DF  K 
Sbjct: 913  NFSRLFMKVKATCPPGGEKSLSYSEICEIVNERLSYHDMTPEGGCSEAFRSSLSDFLIKN 972

Query: 286  IT-TMKNTRRLLQLDEEHVDKNNSVFLEKVAANISGVTSQQLQVFLETCISRYHLKKXXX 110
            +  T+KN R  L L EE  + ++  +LEK+A NISG+T +QLQVFL TCISRYHLK+   
Sbjct: 973  LAETLKNLRESLLLGEEQYEGDDRGYLEKIALNISGITKRQLQVFLNTCISRYHLKRLEA 1032

Query: 109  XXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNITL 2
                        GEPGTQMTLKTFHFAGVASMN+TL
Sbjct: 1033 GTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTL 1068


>gb|ACJ63308.1| RNA polymerase III large subunit [Drimys winteri]
          Length = 547

 Score =  861 bits (2225), Expect = 0.0
 Identities = 415/547 (75%), Positives = 477/547 (87%), Gaps = 1/547 (0%)
 Frame = -3

Query: 1699 LHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSL 1520
            LHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDR  F L
Sbjct: 1    LHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRDTFCL 60

Query: 1519 MCSYMGDAMDHVDLPTPALIKPIELWTGKQLFSVLVRPSANMRVYLNLTVLEKNYSKSGE 1340
            MCS+MGD M+H+DLPTPALIKP+ELWTGKQ+FSVL+RP A+MRVY+NLTV+EKNYSKSGE
Sbjct: 61   MCSFMGDVMEHIDLPTPALIKPMELWTGKQIFSVLIRPQAHMRVYVNLTVVEKNYSKSGE 120

Query: 1339 TMCPNDGFVYFRNSELVCGQLGKATLGNGNKDGLFSVLLRDYNAHAAASCMNRLAKLSAR 1160
            T CP DG+VYFRNSEL+CGQLGKATLGNGNKDGLFSVLLRDY+AHAAASCMNRLA+LSAR
Sbjct: 121  TRCPKDGYVYFRNSELICGQLGKATLGNGNKDGLFSVLLRDYDAHAAASCMNRLAELSAR 180

Query: 1159 WIGNHGFSIGIDDVQPRGNLNREKKYSIEKGYEACDKLIQSYDKGQLKLQPGCDAAQTLE 980
            WIG+HGFSIGI+DVQP  +LN +KK +IEKGYE CD LI SY+KG L LQ GC+AAQTLE
Sbjct: 181  WIGDHGFSIGIEDVQPDEHLNHQKKTTIEKGYEECDNLILSYNKGTLALQSGCNAAQTLE 240

Query: 979  AEITGVLNGIREATAKVCMDELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRA 800
            + ITGVLN +R+  A VCMD LHWRNSPLIMS CGSKGSPINISQM+ACVGQQSVGGRRA
Sbjct: 241  SRITGVLNKVRDTAANVCMDTLHWRNSPLIMSCCGSKGSPINISQMVACVGQQSVGGRRA 300

Query: 799  PNGFIDRSLPHFPRKSKTPAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTADTG 620
            P+GFI+RSLPHF R SKTPAAKGFVANSFY+GLT TEF FHTMGGREGLVDTAVKTA+TG
Sbjct: 301  PDGFINRSLPHFHRNSKTPAAKGFVANSFYSGLTPTEFLFHTMGGREGLVDTAVKTAETG 360

Query: 619  YMSRRLIKALEDLSIHYDDTVRNSSGGVIQFHYGDDGMDPAQMEGKNGVPLNLDRLYLKI 440
            YMSRRL+KALEDLSIHYD+TVRN+SGG++QFHYGDDGMDPA+MEGK+G PLNLDRL++KI
Sbjct: 361  YMSRRLMKALEDLSIHYDETVRNASGGIVQFHYGDDGMDPAKMEGKSGTPLNLDRLFMKI 420

Query: 439  KATCPSSTHA-NLSPSEVLEIVNNRLSRHDMTPEGGCSDAFKKSLLDFFHKRITTMKNTR 263
            +ATCP++  +  LSPSE+ +  N+RLS+HD TPEGGCS AFK+ LLDF H++I T++N  
Sbjct: 421  QATCPTTNASIPLSPSEISQYANDRLSKHDATPEGGCSSAFKQMLLDFIHEKIATLRNVS 480

Query: 262  RLLQLDEEHVDKNNSVFLEKVAANISGVTSQQLQVFLETCISRYHLKKXXXXXXXXXXXX 83
            R+LQ+D+ +   ++   L+ +AA I  ++SQQL+VFLE CISRYHLK+            
Sbjct: 481  RILQIDDNYGGDSDGDMLQTIAAKIFSISSQQLKVFLEACISRYHLKRIEAGTAIGAIGA 540

Query: 82   XXXGEPG 62
               GEPG
Sbjct: 541  QSIGEPG 547


>ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Setaria
            italica]
          Length = 1397

 Score =  860 bits (2223), Expect = 0.0
 Identities = 422/591 (71%), Positives = 491/591 (83%), Gaps = 16/591 (2%)
 Frame = -3

Query: 1726 ADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDT 1547
            ADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFL+TRKD 
Sbjct: 489  ADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLVTRKDA 548

Query: 1546 FYDRAAFSLMCSYMGDAMDHVDLPTPALIKPIELWTGKQLFSVLVRPSANMRVYLNLTVL 1367
            FYDR++F+L+CSY+GDAM+++DLPTPALIKPIELWTGKQLFSVLVRP+A  +V+LNL V 
Sbjct: 549  FYDRSSFALLCSYVGDAMENIDLPTPALIKPIELWTGKQLFSVLVRPNARTKVFLNLAVK 608

Query: 1366 EKNYSKSGE----------------TMCPNDGFVYFRNSELVCGQLGKATLGNGNKDGLF 1235
            EK YSK  E                TMCPNDG+VYFRNSEL+ GQ+GKATLGNGNKDG++
Sbjct: 609  EKIYSKKKEKKEGEEEEKETMCGRETMCPNDGYVYFRNSELLSGQVGKATLGNGNKDGIY 668

Query: 1234 SVLLRDYNAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPRGNLNREKKYSIEKGYEAC 1055
            SVLLRDYN+HAAASCMNRLAK SAR+IGNHGFSIG+DDVQP  +LNR+KK  I++GY+ C
Sbjct: 669  SVLLRDYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVQPGEHLNRQKKKKIDEGYKQC 728

Query: 1054 DKLIQSYDKGQLKLQPGCDAAQTLEAEITGVLNGIREATAKVCMDELHWRNSPLIMSQCG 875
              LI  + KG L L PGC+AAQTLE +ITGVLN IR A   VCMD LHWRNSPLIMSQCG
Sbjct: 729  HDLISLFAKGALALHPGCNAAQTLEHKITGVLNEIRTAAGNVCMDTLHWRNSPLIMSQCG 788

Query: 874  SKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRKSKTPAAKGFVANSFYTGLTA 695
            SKGSPINISQM+ACVGQQSVGGRRAP+GFIDR+LPHFP  SKTPAAKGFVANSFYTGLTA
Sbjct: 789  SKGSPINISQMVACVGQQSVGGRRAPDGFIDRTLPHFPINSKTPAAKGFVANSFYTGLTA 848

Query: 694  TEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDDTVRNSSGGVIQFHYGD 515
            TEFFFHTMGGREGLVDTAVKTA+TGYMSRRL+K LEDLS+ YD TVRN+SGG++QF YGD
Sbjct: 849  TEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQTVRNASGGIVQFLYGD 908

Query: 514  DGMDPAQMEGKNGVPLNLDRLYLKIKATCPSSTHANLSPSEVLEIVNNRLSRHDMTPEGG 335
            DGMDPA+MEGK+G PLNLD+L++K+ ATCP      LSP ++ +++ ++L++H  + +GG
Sbjct: 909  DGMDPAKMEGKDGTPLNLDQLFMKVTATCPHRGLDTLSPDDIKQMLEDKLTQHKTSSDGG 968

Query: 334  CSDAFKKSLLDFFHKRITTMKNTRRLLQLDEEHVDKNNSVFLEKVAANISGVTSQQLQVF 155
            CS+ FK+ L  F  +RI  +K TR+ L LDE+HV KN+S   E +AANISG++++QLQVF
Sbjct: 969  CSEEFKECLKKFLEERIQLLKCTRKALHLDEKHVGKNDSCIEEIIAANISGISAKQLQVF 1028

Query: 154  LETCISRYHLKKXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNITL 2
            L+TC SRY+ K                GEPGTQMTLKTFHFAGVASMN+TL
Sbjct: 1029 LDTCFSRYNSKAIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTL 1079


>gb|ACJ63310.1| RNA polymerase III large subunit [Liriodendron tulipifera]
          Length = 546

 Score =  860 bits (2221), Expect = 0.0
 Identities = 431/549 (78%), Positives = 471/549 (85%), Gaps = 3/549 (0%)
 Frame = -3

Query: 1699 LHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSL 1520
            L+VPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSL
Sbjct: 1    LYVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSL 60

Query: 1519 MCSYMGDAMDHVDLPTPALIKPIELWTGKQLFSVLVRPSANMRVYLNLTVLEKNYSKSGE 1340
            MCSYMGD MD +DLPTPAL+KPIELWTGKQLFSVL+RP A MRVYLNLT+ E+ Y KS +
Sbjct: 61   MCSYMGDGMDPIDLPTPALLKPIELWTGKQLFSVLIRPHARMRVYLNLTLTERIYDKSKD 120

Query: 1339 --TMCPNDGFVYFRNSELVCGQLGKATLGNGNKDGLFSVLLRDYNAHAAASCMNRLAKLS 1166
              TMCPNDG+VYFRNSEL+CGQLGKATLGNGNKDGLFSVLLRDY AHAAASCMNRLAKLS
Sbjct: 121  KKTMCPNDGYVYFRNSELLCGQLGKATLGNGNKDGLFSVLLRDYGAHAAASCMNRLAKLS 180

Query: 1165 ARWIGNHGFSIGIDDVQPRGNLNREKKYSIEKGYEACDKLIQSYDKGQLKLQPGCDAAQT 986
            ARWIGNHGFSIGIDDVQP  +LNR KK  IEKGY+ CD LI  Y+ G LKL PGC+AAQT
Sbjct: 181  ARWIGNHGFSIGIDDVQPGEHLNRNKKLEIEKGYKECDDLINRYNTGGLKLLPGCNAAQT 240

Query: 985  LEAEITGVLNGIREATAKVCMDELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGR 806
            LE+ ITG LN IREA AKVCM  LHWRNSPLIMSQCGSKGSPINISQM+ACVGQQSVGGR
Sbjct: 241  LESNITGKLNDIREAAAKVCMASLHWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGR 300

Query: 805  RAPNGFIDRSLPHFPRKSKTPAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAD 626
            RAPNGFIDRSLPHFP  SKTP+AKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTA+
Sbjct: 301  RAPNGFIDRSLPHFPINSKTPSAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAE 360

Query: 625  TGYMSRRLIKALEDLSIHYDDTVRNSSGGVIQFHYGDDGMDPAQMEGKNGVPLNLDRLYL 446
            TGYMSRRL+K+LEDLS +YD+TVRNSSGG++Q  YGDDGMDPA MEGK G+PLNLDRL++
Sbjct: 361  TGYMSRRLMKSLEDLSTYYDETVRNSSGGIVQLLYGDDGMDPANMEGKEGMPLNLDRLFM 420

Query: 445  KIKATCPSS-THANLSPSEVLEIVNNRLSRHDMTPEGGCSDAFKKSLLDFFHKRITTMKN 269
            K KAT P++  H +LSPSE+L+  ++RLS+HDMTPEGGCS AFK+SL DF  K +  ++ 
Sbjct: 421  KTKATFPATRAHTSLSPSEILKAADDRLSKHDMTPEGGCSAAFKESLSDFLKKCVVALRK 480

Query: 268  TRRLLQLDEEHVDKNNSVFLEKVAANISGVTSQQLQVFLETCISRYHLKKXXXXXXXXXX 89
            TRR L LDE   DK     LE VAANISG+TSQQLQVFLETCI RYHLK+          
Sbjct: 481  TRRELGLDE---DKVREHVLENVAANISGITSQQLQVFLETCIHRYHLKRLEAGAAIGAI 537

Query: 88   XXXXXGEPG 62
                 GEPG
Sbjct: 538  GAQSIGEPG 546


>gb|EXB53229.1| DNA-directed RNA polymerase III subunit RPC1 [Morus notabilis]
          Length = 1179

 Score =  859 bits (2219), Expect = 0.0
 Identities = 428/582 (73%), Positives = 475/582 (81%), Gaps = 7/582 (1%)
 Frame = -3

Query: 1726 ADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDT 1547
            ADFDGDEMN+HVPQTEEARTEA++LMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDT
Sbjct: 277  ADFDGDEMNMHVPQTEEARTEAILLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDT 336

Query: 1546 FYDRAAFSLMCSYMGDAMDHVDLPTPALIKPIELWTGKQLFSVLVRPSANMRVYLNLTVL 1367
            FYDRAAFSLMCSYMGDAM+H DLPTPA+IKP+ELWTGKQLFSVLVRP+AN+RV+LNLTV 
Sbjct: 337  FYDRAAFSLMCSYMGDAMEHNDLPTPAVIKPVELWTGKQLFSVLVRPNANVRVFLNLTVR 396

Query: 1366 EKNYS-------KSGETMCPNDGFVYFRNSELVCGQLGKATLGNGNKDGLFSVLLRDYNA 1208
            EKNYS       +  ETMCP DGFV FRNSEL+ GQLGK TLGNGNKDGL+S+LLRDY A
Sbjct: 397  EKNYSNKLQENEREFETMCPADGFVCFRNSELISGQLGKGTLGNGNKDGLYSILLRDYKA 456

Query: 1207 HAAASCMNRLAKLSARWIGNHGFSIGIDDVQPRGNLNREKKYSIEKGYEACDKLIQSYDK 1028
            HAAA+CMNRLAKLSARWIGNHGFSIGIDDVQP   L  EK   I +G + CD  I+SY +
Sbjct: 457  HAAAACMNRLAKLSARWIGNHGFSIGIDDVQPSDKLRDEKDQKINEGAKDCDDKIKSYKE 516

Query: 1027 GQLKLQPGCDAAQTLEAEITGVLNGIREATAKVCMDELHWRNSPLIMSQCGSKGSPINIS 848
            G L  +PGCDAAQ+LEA ITG+LN IRE T K+CM  L WRNSPLIMSQCGSKGS INIS
Sbjct: 517  GNLPPEPGCDAAQSLEAVITGILNKIREETGKLCMKALPWRNSPLIMSQCGSKGSLINIS 576

Query: 847  QMIACVGQQSVGGRRAPNGFIDRSLPHFPRKSKTPAAKGFVANSFYTGLTATEFFFHTMG 668
            QM+ACVGQQSVGGRRAPNGFIDRSLPHFPRK KTPAAKGFV++SFY GL+ATEFFFHTMG
Sbjct: 577  QMVACVGQQSVGGRRAPNGFIDRSLPHFPRKDKTPAAKGFVSHSFYDGLSATEFFFHTMG 636

Query: 667  GREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDDTVRNSSGGVIQFHYGDDGMDPAQME 488
            GREGLVDTAVKTADTGYMSRRLIKALEDL +HYD+TVRN+S  +IQF YGDDGMDPA ME
Sbjct: 637  GREGLVDTAVKTADTGYMSRRLIKALEDLFVHYDNTVRNASACIIQFCYGDDGMDPAHME 696

Query: 487  GKNGVPLNLDRLYLKIKATCPSSTHANLSPSEVLEIVNNRLSRHDMTPEGGCSDAFKKSL 308
            GKNG PLN +RL+LK KATCP+     LSP +V E+V +RLS+ DMTPEGGCS AFK SL
Sbjct: 697  GKNGAPLNFERLFLKAKATCPAGGTEKLSPEKVSELVESRLSKKDMTPEGGCSAAFKNSL 756

Query: 307  LDFFHKRITTMKNTRRLLQLDEEHVDKNNSVFLEKVAANISGVTSQQLQVFLETCISRYH 128
              F    +   K T    +  E H    NS   + +   +SG T++QL+VFL+TCISRYH
Sbjct: 757  KSFLDNYVKAFKRTWDPCESTEGHAKMENSATTKNIVLQLSGATARQLEVFLDTCISRYH 816

Query: 127  LKKXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNITL 2
             KK               GEPGTQMTLKTFHFAGVASMN+TL
Sbjct: 817  SKKIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTL 858


>ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Solanum
            lycopersicum]
          Length = 1390

 Score =  857 bits (2215), Expect = 0.0
 Identities = 421/576 (73%), Positives = 484/576 (84%), Gaps = 1/576 (0%)
 Frame = -3

Query: 1726 ADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDT 1547
            ADFDGDEMN+HVPQTEEARTEALMLMGVQNNLCTPK+GEILVASTQDFLTSSFLITRKDT
Sbjct: 493  ADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKSGEILVASTQDFLTSSFLITRKDT 552

Query: 1546 FYDRAAFSLMCSYMGDAMDHVDLPTPALIKPIELWTGKQLFSVLVRPSANMRVYLNLTVL 1367
            FY+RA+FSL+CSYMGDAMD  DLP+PA IKP+ELWTGKQLF VL+RP + MRVY+NLT+ 
Sbjct: 553  FYNRASFSLICSYMGDAMDPTDLPSPAFIKPVELWTGKQLFHVLLRPYSKMRVYVNLTLT 612

Query: 1366 EKNYSKSGETMCPNDGFVYFRNSELVCGQLGKATLGNGNKDGLFSVLLRDYNAHAAASCM 1187
            EK+YS  GETMC +DGFVYFRNSEL+ GQLGKATLGNGNKDGL+SVLLRDY +HAAA+CM
Sbjct: 613  EKSYSGKGETMCSSDGFVYFRNSELISGQLGKATLGNGNKDGLYSVLLRDYESHAAATCM 672

Query: 1186 NRLAKLSARWIGNHGFSIGIDDVQPRGNLNREKKYSIEKGYEACDKLIQSYDKGQLKLQP 1007
            NRLAKLSARWIGNHGFSIGIDDV P  NL ++K+  I + Y+ C+  I  +++G+L +QP
Sbjct: 673  NRLAKLSARWIGNHGFSIGIDDVTPGENLVKQKQGEIHRNYKKCEDCITQFNEGKLAVQP 732

Query: 1006 GCDAAQTLEAEITGVLNGIREATAKVCMDELHWRNSPLIMSQCGSKGSPINISQMIACVG 827
            GCDAAQTLEAE+T  LN +R+   K+CM  L WRNSPLIMSQCGSKGSPINISQMIACVG
Sbjct: 733  GCDAAQTLEAEVTMSLNKVRDDIGKICMKALDWRNSPLIMSQCGSKGSPINISQMIACVG 792

Query: 826  QQSVGGRRAPNGFIDRSLPHFPRKSKTPAAKGFVANSFYTGLTATEFFFHTMGGREGLVD 647
            QQSVGGRRAP+GFIDRSLPHFP KSK PAAKGFVA+SF+ GL+ATEFFFHTMGGREGLVD
Sbjct: 793  QQSVGGRRAPDGFIDRSLPHFPFKSKFPAAKGFVAHSFFDGLSATEFFFHTMGGREGLVD 852

Query: 646  TAVKTADTGYMSRRLIKALEDLSIHYDDTVRNSSGGVIQFHYGDDGMDPAQMEGKNGVPL 467
            TAVKTADTGYMSRRL+KALEDL+++YD TVRN+S  ++QF YGDDGMDP++ME K G PL
Sbjct: 853  TAVKTADTGYMSRRLMKALEDLAVYYDSTVRNASACIVQFMYGDDGMDPSRMEEKKGRPL 912

Query: 466  NLDRLYLKIKATCPSSTHANLSPSEVLEIVNNRLSRHDMTPEGGCSDAFKKSLLDFFHKR 287
            N  RL++K+KATCP     +LS SE+ EIVN RLS HDMTPEGGCS+AF+ SL DF  K 
Sbjct: 913  NFSRLFMKVKATCPPGGEKSLSYSEICEIVNERLSYHDMTPEGGCSEAFRASLSDFLIKS 972

Query: 286  IT-TMKNTRRLLQLDEEHVDKNNSVFLEKVAANISGVTSQQLQVFLETCISRYHLKKXXX 110
            +  T+KN R  L L EE  + ++  +LEK+  NISG+T +QLQVFL TCISRYHLK+   
Sbjct: 973  LAETLKNLRESLLLGEEQYEGDDRGYLEKIVLNISGITKKQLQVFLNTCISRYHLKRLEA 1032

Query: 109  XXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNITL 2
                        GEPGTQMTLKTFHFAGVASMN+TL
Sbjct: 1033 GTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTL 1068


>ref|XP_004294640.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
            [Fragaria vesca subsp. vesca]
          Length = 1390

 Score =  853 bits (2204), Expect = 0.0
 Identities = 423/582 (72%), Positives = 478/582 (82%), Gaps = 7/582 (1%)
 Frame = -3

Query: 1726 ADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDT 1547
            ADFDGDEMN+HVPQTEEARTEA+MLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDT
Sbjct: 493  ADFDGDEMNMHVPQTEEARTEAVMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDT 552

Query: 1546 FYDRAAFSLMCSYMGDAMDHVDLPTPALIKPIELWTGKQLFSVLVRPSANMRVYLNLTVL 1367
            FYDRA+FSLMCSYMGD  +HVDLPTPA++KPIELWTGKQL+SVLVRP++N+RVYLNLTV 
Sbjct: 553  FYDRASFSLMCSYMGDGTEHVDLPTPAVVKPIELWTGKQLYSVLVRPNSNVRVYLNLTVR 612

Query: 1366 EKNYS-------KSGETMCPNDGFVYFRNSELVCGQLGKATLGNGNKDGLFSVLLRDYNA 1208
            EK+YS       +  E MCPNDGFVYFRNSEL+ GQLGK TLGNGNKDGLFSVLLRDY A
Sbjct: 613  EKSYSNRKTEDGREIEAMCPNDGFVYFRNSELLSGQLGKGTLGNGNKDGLFSVLLRDYKA 672

Query: 1207 HAAASCMNRLAKLSARWIGNHGFSIGIDDVQPRGNLNREKKYSIEKGYEACDKLIQSYDK 1028
            HAAASCMNR+AKLSARWIGNHGFSIGI DVQP   L  EK+  I+KGY+ CD  I+ Y +
Sbjct: 673  HAAASCMNRVAKLSARWIGNHGFSIGISDVQPSDILYGEKEKIIKKGYDKCDDQIKLYKE 732

Query: 1027 GQLKLQPGCDAAQTLEAEITGVLNGIREATAKVCMDELHWRNSPLIMSQCGSKGSPINIS 848
            GQL+L PGCDAAQ+LE+ IT VLN IR+ T K+CM  LHWRNSPLIMSQCGSKGS INIS
Sbjct: 733  GQLRLAPGCDAAQSLESGITAVLNDIRDQTGKLCMQTLHWRNSPLIMSQCGSKGSAINIS 792

Query: 847  QMIACVGQQSVGGRRAPNGFIDRSLPHFPRKSKTPAAKGFVANSFYTGLTATEFFFHTMG 668
            QM+ACVGQQSVGGRRAPNGFIDRSLPHFPRK  TPAAKGFVA+SFY+GLTATEFFFHTMG
Sbjct: 793  QMVACVGQQSVGGRRAPNGFIDRSLPHFPRKVNTPAAKGFVASSFYSGLTATEFFFHTMG 852

Query: 667  GREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDDTVRNSSGGVIQFHYGDDGMDPAQME 488
            GREGLVDTAVKTADTGYMSRRL K LEDLS+ YD TVR ++GG++QF YGDDGMDPA ME
Sbjct: 853  GREGLVDTAVKTADTGYMSRRLSKVLEDLSVQYDKTVRAANGGIVQFCYGDDGMDPAMME 912

Query: 487  GKNGVPLNLDRLYLKIKATCPSSTHANLSPSEVLEIVNNRLSRHDMTPEGGCSDAFKKSL 308
            GK+G PL+  RL+ + KATCP+    +LSP EV EIV +RLS  DMTP+GGCS  FK S+
Sbjct: 913  GKSGAPLDFYRLFFRAKATCPAGESESLSPDEVSEIVRSRLSEQDMTPDGGCSMGFKSSI 972

Query: 307  LDFFHKRITTMKNTRRLLQLDEEHVDKNNSVFLEKVAANISGVTSQQLQVFLETCISRYH 128
              F  + +  ++ T+    L++    +  S  L+ +  NISGVT +QL+VFL+TCISRYH
Sbjct: 973  EQFLDEYVKALRKTQEAFLLNQSPGWEVKSATLQNIVQNISGVTPRQLKVFLDTCISRYH 1032

Query: 127  LKKXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNITL 2
             KK               GEPGTQMTLKTFHFAGVASMN+TL
Sbjct: 1033 SKKVDAGTAIGVIGAQSIGEPGTQMTLKTFHFAGVASMNVTL 1074


>ref|XP_003574945.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
            [Brachypodium distachyon]
          Length = 1392

 Score =  845 bits (2183), Expect = 0.0
 Identities = 415/588 (70%), Positives = 485/588 (82%), Gaps = 13/588 (2%)
 Frame = -3

Query: 1726 ADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDT 1547
            ADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKD 
Sbjct: 486  ADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDN 545

Query: 1546 FYDRAAFSLMCSYMGDAMDHVDLPTPALIKPIELWTGKQLFSVLVRPSANMRVYLNLTVL 1367
            FYDR+ F+L+CSY+GDAM+++DLPTPA+IKP+ELWTGKQLFSVLVRP+A  +VYLNLTV 
Sbjct: 546  FYDRSYFTLLCSYLGDAMENIDLPTPAIIKPLELWTGKQLFSVLVRPNACTKVYLNLTVE 605

Query: 1366 EKNYSKSGE-----------TMCPNDGFVYFRNSELVCGQLGKATLGNGNKDGLFSVLLR 1220
            EK Y K  E           TMCPNDG+VYFRNSEL+ GQ+GK TLGNGNKDG+FSVL+R
Sbjct: 606  EKIYMKRRERDKNAVSVLEETMCPNDGYVYFRNSELLSGQVGKKTLGNGNKDGMFSVLVR 665

Query: 1219 DYNAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPRGNLNREKKYSIEKGYEACDKLIQ 1040
            DYN+HAAASCMNRLAK SAR+IGNHGFSIG+DDVQP  +LN++KK +I++GY  C  LI 
Sbjct: 666  DYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVQPGESLNQKKKKTIDQGYTECHDLIA 725

Query: 1039 SYDKGQ--LKLQPGCDAAQTLEAEITGVLNGIREATAKVCMDELHWRNSPLIMSQCGSKG 866
             Y KG    +L PGC+ AQTLE  ++ +LN +RE   + CM+ LHWRNSPLIMSQCGSKG
Sbjct: 726  VYSKGAPGAELHPGCNRAQTLEVRVSAILNQLREKAGEHCMNTLHWRNSPLIMSQCGSKG 785

Query: 865  SPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRKSKTPAAKGFVANSFYTGLTATEF 686
            SPINISQM+ CVGQQSVGGRRAP+GFIDR+LPHFP  SKTPAAKGFVANSFYTGLTATEF
Sbjct: 786  SPINISQMVVCVGQQSVGGRRAPDGFIDRTLPHFPIHSKTPAAKGFVANSFYTGLTATEF 845

Query: 685  FFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDDTVRNSSGGVIQFHYGDDGM 506
            FFHTMGGREGLVDTAVKTA+TGYMSRRL+K LEDLS+ YD TVRN+S G++QF YGDDGM
Sbjct: 846  FFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQTVRNASSGIVQFVYGDDGM 905

Query: 505  DPAQMEGKNGVPLNLDRLYLKIKATCPSSTHANLSPSEVLEIVNNRLSRHDMTPEGGCSD 326
            DP +MEGK G PLNLD+L++K+KATCP   H  LSP  +++++N++LS  DM+  GGCSD
Sbjct: 906  DPVKMEGKGGSPLNLDQLFMKVKATCPQRGHDMLSPEAIMQMLNDKLSEQDMS-SGGCSD 964

Query: 325  AFKKSLLDFFHKRITTMKNTRRLLQLDEEHVDKNNSVFLEKVAANISGVTSQQLQVFLET 146
             FK+ L  FF  RI  +++TRR L LDE+HV   +S   E++AANISG++++QLQVFL+T
Sbjct: 965  KFKELLTKFFEDRIKMLRSTRRTLHLDEDHVGMKDSSIEERIAANISGISAKQLQVFLDT 1024

Query: 145  CISRYHLKKXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNITL 2
            C+SRYH K                GEPGTQMTLKTFHFAGVASMN+TL
Sbjct: 1025 CLSRYHSKIIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTL 1072


>gb|AAS79695.1| RNA polymerase III large subunit [Cycas revoluta]
          Length = 548

 Score =  840 bits (2171), Expect = 0.0
 Identities = 411/548 (75%), Positives = 463/548 (84%)
 Frame = -3

Query: 1705 MNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAF 1526
            MNLHVPQTEEARTEALMLMGVQNNLCTPKNGEIL+ASTQDFLTSSFLITRKDTFYDRA F
Sbjct: 1    MNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILIASTQDFLTSSFLITRKDTFYDRATF 60

Query: 1525 SLMCSYMGDAMDHVDLPTPALIKPIELWTGKQLFSVLVRPSANMRVYLNLTVLEKNYSKS 1346
             LMCSYMGDA++ +DLPTP ++KPIELWTGKQLFSVLVRP+AN+RV++NL + EKNYSKS
Sbjct: 61   CLMCSYMGDAVEPIDLPTPTILKPIELWTGKQLFSVLVRPNANVRVFVNLMLAEKNYSKS 120

Query: 1345 GETMCPNDGFVYFRNSELVCGQLGKATLGNGNKDGLFSVLLRDYNAHAAASCMNRLAKLS 1166
             ETMCPNDGFVYFRNSEL+ GQ+GKATLGNGNKDGLF+VLLRDYN HAAAS MNRLAKLS
Sbjct: 121  RETMCPNDGFVYFRNSELISGQIGKATLGNGNKDGLFTVLLRDYNTHAAASSMNRLAKLS 180

Query: 1165 ARWIGNHGFSIGIDDVQPRGNLNREKKYSIEKGYEACDKLIQSYDKGQLKLQPGCDAAQT 986
            ARWIGNHGFSIGIDDVQP   L+ +K+  I++GY  CD  I  Y+KG+L LQPGC+AAQT
Sbjct: 181  ARWIGNHGFSIGIDDVQPGTRLSAQKEERIKEGYSKCDMHIDLYNKGKLTLQPGCNAAQT 240

Query: 985  LEAEITGVLNGIREATAKVCMDELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGR 806
            LEAEITG LN IRE    VC+ ELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGR
Sbjct: 241  LEAEITGELNKIREIAGSVCLKELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGR 300

Query: 805  RAPNGFIDRSLPHFPRKSKTPAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAD 626
            RAPNGFIDRSLPHFPR  KTPAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTA+
Sbjct: 301  RAPNGFIDRSLPHFPRNDKTPAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAE 360

Query: 625  TGYMSRRLIKALEDLSIHYDDTVRNSSGGVIQFHYGDDGMDPAQMEGKNGVPLNLDRLYL 446
            TGYMSRRL+KALEDLS HYD TVRN+SGG++Q  YGDDGMDP  MEGK+G PLNLDRL +
Sbjct: 361  TGYMSRRLMKALEDLSTHYDGTVRNASGGIVQLLYGDDGMDPVNMEGKDGTPLNLDRLLM 420

Query: 445  KIKATCPSSTHANLSPSEVLEIVNNRLSRHDMTPEGGCSDAFKKSLLDFFHKRITTMKNT 266
            K KA CP++   +LSP+E+ + V  RLS+HDMTPEGGCS AFK SL  FF K I+ ++ T
Sbjct: 421  KTKAICPANGVISLSPAEISKRVEERLSKHDMTPEGGCSAAFKNSLAKFFEKHISVIRKT 480

Query: 265  RRLLQLDEEHVDKNNSVFLEKVAANISGVTSQQLQVFLETCISRYHLKKXXXXXXXXXXX 86
            R  L L  +  D +N   LE++A++ISG+T++Q +VF+ETCI RYHLK+           
Sbjct: 481  RCALGLPMDASDDSNFFILERIASDISGLTARQFEVFIETCIGRYHLKRMEAGAAIGAIG 540

Query: 85   XXXXGEPG 62
                GEPG
Sbjct: 541  AQSIGEPG 548


>gb|AAS79696.1| RNA polymerase III large subunit [Zamia muricata]
          Length = 548

 Score =  839 bits (2167), Expect = 0.0
 Identities = 411/548 (75%), Positives = 464/548 (84%)
 Frame = -3

Query: 1705 MNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAF 1526
            MNLHVPQTEEARTEAL LMGVQNNLCTPKNGEIL+ASTQDFLTSSFLITRKDTFYDRA+F
Sbjct: 1    MNLHVPQTEEARTEALTLMGVQNNLCTPKNGEILIASTQDFLTSSFLITRKDTFYDRASF 60

Query: 1525 SLMCSYMGDAMDHVDLPTPALIKPIELWTGKQLFSVLVRPSANMRVYLNLTVLEKNYSKS 1346
             LMCSYMGDA + +DLPTP ++KP+ELWTGKQLFSVLVRP+AN+RV++NL + EKNYSKS
Sbjct: 61   CLMCSYMGDAAEPIDLPTPTILKPMELWTGKQLFSVLVRPNANVRVFVNLMLTEKNYSKS 120

Query: 1345 GETMCPNDGFVYFRNSELVCGQLGKATLGNGNKDGLFSVLLRDYNAHAAASCMNRLAKLS 1166
            GETMCPNDGFVYFRNSEL+ GQ+GKATLGNGNKDGLF+VLLRDYN HAAAS MNRLAKLS
Sbjct: 121  GETMCPNDGFVYFRNSELISGQIGKATLGNGNKDGLFTVLLRDYNTHAAASSMNRLAKLS 180

Query: 1165 ARWIGNHGFSIGIDDVQPRGNLNREKKYSIEKGYEACDKLIQSYDKGQLKLQPGCDAAQT 986
            ARWIGNHGFSIGIDDVQP   L+ +K+  I++GY  CD  I  Y+KG+L LQPGC+AAQT
Sbjct: 181  ARWIGNHGFSIGIDDVQPGTRLSAKKEERIKEGYSKCDMHIDLYNKGKLTLQPGCNAAQT 240

Query: 985  LEAEITGVLNGIREATAKVCMDELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGR 806
            LEAEITG LN IRE    VC+ ELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGR
Sbjct: 241  LEAEITGELNKIREVAGSVCLKELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGR 300

Query: 805  RAPNGFIDRSLPHFPRKSKTPAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAD 626
            RAPNGFIDRSLPHFPR  KTPAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTA+
Sbjct: 301  RAPNGFIDRSLPHFPRNDKTPAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAE 360

Query: 625  TGYMSRRLIKALEDLSIHYDDTVRNSSGGVIQFHYGDDGMDPAQMEGKNGVPLNLDRLYL 446
            TGYMSRRL+KALEDLS HYD TVRN+SGG++Q  YGDD MDP  MEGKNG PLNLDR+ +
Sbjct: 361  TGYMSRRLMKALEDLSTHYDGTVRNASGGIVQLLYGDDAMDPVNMEGKNGTPLNLDRILM 420

Query: 445  KIKATCPSSTHANLSPSEVLEIVNNRLSRHDMTPEGGCSDAFKKSLLDFFHKRITTMKNT 266
            K KATCP++   +LSPSE+ + V +RLS+HDMTPEGGCS AFK SL  F  K+I+ ++NT
Sbjct: 421  KAKATCPANGAFSLSPSEISKRVEDRLSKHDMTPEGGCSAAFKNSLAQFLEKQISLIQNT 480

Query: 265  RRLLQLDEEHVDKNNSVFLEKVAANISGVTSQQLQVFLETCISRYHLKKXXXXXXXXXXX 86
            R +L L  +     N   LE++A++ISG+T+QQ +VF+ETCI RYHLK+           
Sbjct: 481  RCVLGLPMDANGDPNLSTLERIASDISGLTAQQFEVFMETCIRRYHLKRIEAGAAIGAIG 540

Query: 85   XXXXGEPG 62
                GEPG
Sbjct: 541  AQSIGEPG 548


>ref|XP_003570766.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
            [Brachypodium distachyon]
          Length = 1400

 Score =  838 bits (2166), Expect = 0.0
 Identities = 412/586 (70%), Positives = 480/586 (81%), Gaps = 11/586 (1%)
 Frame = -3

Query: 1726 ADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDT 1547
            ADFDGDEMNLHVPQTEEARTEA +LMGVQ+NLCTPKNGEILVASTQDFLTSSFL+TRKDT
Sbjct: 491  ADFDGDEMNLHVPQTEEARTEAFLLMGVQSNLCTPKNGEILVASTQDFLTSSFLVTRKDT 550

Query: 1546 FYDRAAFSLMCSYMGDAMDHVDLPTPALIKPIELWTGKQLFSVLVRPSANMRVYLNLTVL 1367
            FYDR+ F+L+CSY+GDAM+++DLPTPA+IKP+ELWTGKQLFSVLVRP+A  +V+LNLTV 
Sbjct: 551  FYDRSYFTLLCSYLGDAMENIDLPTPAIIKPVELWTGKQLFSVLVRPNACTKVFLNLTVE 610

Query: 1366 EKNYSKSGE-----------TMCPNDGFVYFRNSELVCGQLGKATLGNGNKDGLFSVLLR 1220
            EK Y K  E           TMCPNDGFVYFRNSEL+ GQLGK TLGNGNK+G+FSVLLR
Sbjct: 611  EKVYIKHKERDKKAITVLEETMCPNDGFVYFRNSELLSGQLGKKTLGNGNKEGMFSVLLR 670

Query: 1219 DYNAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPRGNLNREKKYSIEKGYEACDKLIQ 1040
            DYN+HAAASCMNRLAK SAR+IGNHGFSIG+DDVQP  +LN++KK  I++GYE C+KLI 
Sbjct: 671  DYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVQPGQSLNKKKKVIIDEGYEECNKLIA 730

Query: 1039 SYDKGQLKLQPGCDAAQTLEAEITGVLNGIREATAKVCMDELHWRNSPLIMSQCGSKGSP 860
             Y KG LK QPGC  AQTLE++I+ VLN +RE     CM  LHWRNSPLIMSQCGSKGSP
Sbjct: 731  LYSKGHLKPQPGCSRAQTLESQISCVLNKLRETAGDDCMSTLHWRNSPLIMSQCGSKGSP 790

Query: 859  INISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRKSKTPAAKGFVANSFYTGLTATEFFF 680
            INISQM+ CVGQQSVGG RAPNGFIDR+LPHFP  SKTPAAKGFVANSFYTGLTA+EFFF
Sbjct: 791  INISQMVVCVGQQSVGGCRAPNGFIDRTLPHFPINSKTPAAKGFVANSFYTGLTASEFFF 850

Query: 679  HTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDDTVRNSSGGVIQFHYGDDGMDP 500
            HTMGGREGLVDTAVKTADTGY+SRRL+K LEDLS+ YD TVRN+SGG++QF YGDDGMDP
Sbjct: 851  HTMGGREGLVDTAVKTADTGYLSRRLMKGLEDLSVFYDQTVRNASGGIVQFVYGDDGMDP 910

Query: 499  AQMEGKNGVPLNLDRLYLKIKATCPSSTHANLSPSEVLEIVNNRLSRHDMTPEGGCSDAF 320
             +MEGK G PLNLD+L++K+KATCP   H  LSP  +L++ N+ L + + T  G CSD  
Sbjct: 911  VKMEGKGGSPLNLDQLFMKVKATCPQRGHDTLSPDVILQMFNDTLFKQE-TSSGRCSDKL 969

Query: 319  KKSLLDFFHKRITTMKNTRRLLQLDEEHVDKNNSVFLEKVAANISGVTSQQLQVFLETCI 140
            K+ L  F   R+  +++TRR L +DE+HV + +S   E +AA+ISG++++QLQVFL+TC 
Sbjct: 970  KEMLTKFLEDRVKMLRSTRRALHIDEDHVGRRDSSVEECIAADISGISAKQLQVFLDTCF 1029

Query: 139  SRYHLKKXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNITL 2
            SRYH K                GEPGTQMTLKTFHFAGVASMN+TL
Sbjct: 1030 SRYHSKIIEAGASVGPIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 1075


>emb|CBI16226.3| unnamed protein product [Vitis vinifera]
          Length = 1819

 Score =  833 bits (2151), Expect = 0.0
 Identities = 416/524 (79%), Positives = 460/524 (87%), Gaps = 2/524 (0%)
 Frame = -3

Query: 1726 ADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDT 1547
            ADFDGDEMN+HVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDT
Sbjct: 496  ADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDT 555

Query: 1546 FYDRAAFSLMCSYMGDAMDHVDLPTPALIKPIELWTGKQLFSVLVRPSANMRVYLNLTVL 1367
            FYDRAAFSLMCSYMGD MD VDLPTPA+IK +ELWTGKQLF+VL+RP AN+RVYLNLTV+
Sbjct: 556  FYDRAAFSLMCSYMGDGMDLVDLPTPAIIKAMELWTGKQLFNVLLRPHANVRVYLNLTVM 615

Query: 1366 EKNYSK--SGETMCPNDGFVYFRNSELVCGQLGKATLGNGNKDGLFSVLLRDYNAHAAAS 1193
            EK Y+K    ETMCP+DGFVYFRNSEL+ GQLGKATLGNGNKDGLFSVLLRDYNAHAAA+
Sbjct: 616  EKTYNKRRGKETMCPSDGFVYFRNSELISGQLGKATLGNGNKDGLFSVLLRDYNAHAAAA 675

Query: 1192 CMNRLAKLSARWIGNHGFSIGIDDVQPRGNLNREKKYSIEKGYEACDKLIQSYDKGQLKL 1013
            CMNRLAKLSARWIGNHGFSIGIDDVQP G LN +K   IE+GYE C +LIQ Y+KG+LKL
Sbjct: 676  CMNRLAKLSARWIGNHGFSIGIDDVQPGGLLNDQKSKRIEEGYENCHELIQQYNKGKLKL 735

Query: 1012 QPGCDAAQTLEAEITGVLNGIREATAKVCMDELHWRNSPLIMSQCGSKGSPINISQMIAC 833
            QPGC+AAQTLEAEITGVLN IRE TA VCM+ELHWRNSPLIMSQCGSKGSPINISQMIAC
Sbjct: 736  QPGCNAAQTLEAEITGVLNKIRETTANVCMEELHWRNSPLIMSQCGSKGSPINISQMIAC 795

Query: 832  VGQQSVGGRRAPNGFIDRSLPHFPRKSKTPAAKGFVANSFYTGLTATEFFFHTMGGREGL 653
            VGQQSVGGRRAP+GFIDR+LPHFPRKSKTP AKGFVA+SFYTGLTATEFFFHTMGGREGL
Sbjct: 796  VGQQSVGGRRAPDGFIDRTLPHFPRKSKTPDAKGFVASSFYTGLTATEFFFHTMGGREGL 855

Query: 652  VDTAVKTADTGYMSRRLIKALEDLSIHYDDTVRNSSGGVIQFHYGDDGMDPAQMEGKNGV 473
            VDTAVKTADTGYMSRRL+KALEDLSI YD+TVRN++G ++QF YGDDGMDPA+MEGK+G 
Sbjct: 856  VDTAVKTADTGYMSRRLMKALEDLSIQYDETVRNANGSIVQFLYGDDGMDPARMEGKDGF 915

Query: 472  PLNLDRLYLKIKATCPSSTHANLSPSEVLEIVNNRLSRHDMTPEGGCSDAFKKSLLDFFH 293
            PLN +RL+LK+KATCP+  +A+LS  ++ E V  RL  H+ + E GCSDAFK +L  F  
Sbjct: 916  PLNFNRLFLKVKATCPAGENASLSALQIEETV-KRLKEHNTSAE-GCSDAFKTNLSGFLE 973

Query: 292  KRITTMKNTRRLLQLDEEHVDKNNSVFLEKVAANISGVTSQQLQ 161
            +     KNTR  L L  EHV + N    EK A NISG+TS+QLQ
Sbjct: 974  ECKEKFKNTREALGLHGEHVGEENLDIQEKFAKNISGITSKQLQ 1017



 Score = 68.6 bits (166), Expect = 9e-09
 Identities = 35/57 (61%), Positives = 40/57 (70%)
 Frame = -3

Query: 172  QQLQVFLETCISRYHLKKXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNITL 2
            ++L VFL+TCISRY LK+               GEPGTQMTLKTFHFAGVASMN+TL
Sbjct: 1450 KRLGVFLDTCISRYQLKRIEAGTAIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 1506


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