BLASTX nr result
ID: Akebia26_contig00028679
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia26_contig00028679
(1728 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006828249.1| hypothetical protein AMTR_s00023p00196820 [A... 939 0.0
ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s... 899 0.0
ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group] g... 881 0.0
ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III s... 868 0.0
ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [S... 867 0.0
gb|ACJ63311.1| RNA polymerase III large subunit [Papaver orientale] 866 0.0
ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III s... 866 0.0
ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III s... 864 0.0
ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III s... 864 0.0
gb|ACJ63308.1| RNA polymerase III large subunit [Drimys winteri] 861 0.0
ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III s... 860 0.0
gb|ACJ63310.1| RNA polymerase III large subunit [Liriodendron tu... 860 0.0
gb|EXB53229.1| DNA-directed RNA polymerase III subunit RPC1 [Mor... 859 0.0
ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III s... 857 0.0
ref|XP_004294640.1| PREDICTED: DNA-directed RNA polymerase III s... 853 0.0
ref|XP_003574945.1| PREDICTED: DNA-directed RNA polymerase III s... 845 0.0
gb|AAS79695.1| RNA polymerase III large subunit [Cycas revoluta] 840 0.0
gb|AAS79696.1| RNA polymerase III large subunit [Zamia muricata] 839 0.0
ref|XP_003570766.1| PREDICTED: DNA-directed RNA polymerase III s... 838 0.0
emb|CBI16226.3| unnamed protein product [Vitis vinifera] 833 0.0
>ref|XP_006828249.1| hypothetical protein AMTR_s00023p00196820 [Amborella trichopoda]
gi|548832896|gb|ERM95665.1| hypothetical protein
AMTR_s00023p00196820 [Amborella trichopoda]
Length = 1383
Score = 939 bits (2426), Expect = 0.0
Identities = 459/575 (79%), Positives = 509/575 (88%)
Frame = -3
Query: 1726 ADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDT 1547
ADFDGDEMN+HVPQTEEARTEALMLMGVQ+NLCTPKNGEILVASTQDFLTSS+LITRKDT
Sbjct: 492 ADFDGDEMNIHVPQTEEARTEALMLMGVQHNLCTPKNGEILVASTQDFLTSSYLITRKDT 551
Query: 1546 FYDRAAFSLMCSYMGDAMDHVDLPTPALIKPIELWTGKQLFSVLVRPSANMRVYLNLTVL 1367
FYDRA FSLMCSYMGD M+++DLPTPAL+KP+ELWTGKQLFSVL+RP A+M+VY+NL+++
Sbjct: 552 FYDRATFSLMCSYMGDGMENIDLPTPALLKPVELWTGKQLFSVLIRPHAHMKVYVNLSLM 611
Query: 1366 EKNYSKSGETMCPNDGFVYFRNSELVCGQLGKATLGNGNKDGLFSVLLRDYNAHAAASCM 1187
EKNYSK GETMC NDGFVY RNSEL+ GQLGKATLGNGNKDGLFSVLLRDYN+HAAASCM
Sbjct: 612 EKNYSKGGETMCANDGFVYIRNSELISGQLGKATLGNGNKDGLFSVLLRDYNSHAAASCM 671
Query: 1186 NRLAKLSARWIGNHGFSIGIDDVQPRGNLNREKKYSIEKGYEACDKLIQSYDKGQLKLQP 1007
NRLAKLSARWIGNHGFSIGIDDV P +L ++K+ I+ GY CD I +YDKG+L L+P
Sbjct: 672 NRLAKLSARWIGNHGFSIGIDDVLPGSHLTKQKEEQIKGGYSNCDAFIDAYDKGKLSLKP 731
Query: 1006 GCDAAQTLEAEITGVLNGIREATAKVCMDELHWRNSPLIMSQCGSKGSPINISQMIACVG 827
GC+AAQTLEAEIT VLNGIR+A AKVCM+ELHWRNSPLIMSQCGSKGSPINISQMIACVG
Sbjct: 732 GCNAAQTLEAEITRVLNGIRDAAAKVCMEELHWRNSPLIMSQCGSKGSPINISQMIACVG 791
Query: 826 QQSVGGRRAPNGFIDRSLPHFPRKSKTPAAKGFVANSFYTGLTATEFFFHTMGGREGLVD 647
QQSVGGRRAPNGFIDRSLPHFPR KTPAAKGFVANSFYTGLTA EFFFHTMGGREGLVD
Sbjct: 792 QQSVGGRRAPNGFIDRSLPHFPRNDKTPAAKGFVANSFYTGLTAAEFFFHTMGGREGLVD 851
Query: 646 TAVKTADTGYMSRRLIKALEDLSIHYDDTVRNSSGGVIQFHYGDDGMDPAQMEGKNGVPL 467
TAVKTADTGY+SRRLIK+LEDLS HYDDTVRNSSG +IQF YGDDGMDPA+MEGK+GVPL
Sbjct: 852 TAVKTADTGYLSRRLIKSLEDLSTHYDDTVRNSSGTIIQFSYGDDGMDPAKMEGKSGVPL 911
Query: 466 NLDRLYLKIKATCPSSTHANLSPSEVLEIVNNRLSRHDMTPEGGCSDAFKKSLLDFFHKR 287
NLDRL++KIKATCP+S A+LSPSE+ IVN+RLS+HDMTPE GCS AFK+ L +F KR
Sbjct: 912 NLDRLFMKIKATCPASVSASLSPSEISTIVNDRLSKHDMTPERGCSMAFKEELSNFIKKR 971
Query: 286 ITTMKNTRRLLQLDEEHVDKNNSVFLEKVAANISGVTSQQLQVFLETCISRYHLKKXXXX 107
+ +K TR +L LDE+ VDK LE VAANISG++ QQL+VFLETCISRYHLK+
Sbjct: 972 MDAIKKTRNMLGLDEDCVDKEKFSGLEHVAANISGISRQQLRVFLETCISRYHLKRIEAG 1031
Query: 106 XXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNITL 2
GEPGTQMTLKTFHFAGVASMNITL
Sbjct: 1032 TAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNITL 1066
>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Vitis
vinifera]
Length = 1383
Score = 899 bits (2323), Expect = 0.0
Identities = 451/577 (78%), Positives = 498/577 (86%), Gaps = 2/577 (0%)
Frame = -3
Query: 1726 ADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDT 1547
ADFDGDEMN+HVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDT
Sbjct: 496 ADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDT 555
Query: 1546 FYDRAAFSLMCSYMGDAMDHVDLPTPALIKPIELWTGKQLFSVLVRPSANMRVYLNLTVL 1367
FYDRAAFSLMCSYMGD MD VDLPTPA+IKP+ELWTGKQLF+VL+RP AN+RVYLNLTV+
Sbjct: 556 FYDRAAFSLMCSYMGDGMDLVDLPTPAIIKPVELWTGKQLFNVLLRPHANVRVYLNLTVM 615
Query: 1366 EKNYSK--SGETMCPNDGFVYFRNSELVCGQLGKATLGNGNKDGLFSVLLRDYNAHAAAS 1193
EK Y+K ETMCP+DGFVYFRNSEL+ GQLGKATLGNGNKDGLFSVLLRDYNAHAAA+
Sbjct: 616 EKTYNKRRGKETMCPSDGFVYFRNSELISGQLGKATLGNGNKDGLFSVLLRDYNAHAAAA 675
Query: 1192 CMNRLAKLSARWIGNHGFSIGIDDVQPRGNLNREKKYSIEKGYEACDKLIQSYDKGQLKL 1013
CMNRLAKLSARWIGNHGFSIGIDDVQP G LN +K IE+GYE C +LIQ Y+KG+LKL
Sbjct: 676 CMNRLAKLSARWIGNHGFSIGIDDVQPGGLLNDQKSKRIEEGYENCHELIQQYNKGKLKL 735
Query: 1012 QPGCDAAQTLEAEITGVLNGIREATAKVCMDELHWRNSPLIMSQCGSKGSPINISQMIAC 833
QPGC+AAQTLEAEITGVLN IRE TA VCM+ELHWRNSPLIMSQCGSKGSPINISQMIAC
Sbjct: 736 QPGCNAAQTLEAEITGVLNKIRETTANVCMEELHWRNSPLIMSQCGSKGSPINISQMIAC 795
Query: 832 VGQQSVGGRRAPNGFIDRSLPHFPRKSKTPAAKGFVANSFYTGLTATEFFFHTMGGREGL 653
VGQQSVGGRRAP+GFIDR+LPHFPRKSKTP AKGFVA+SFYTGLTATEFFFHTMGGREGL
Sbjct: 796 VGQQSVGGRRAPDGFIDRTLPHFPRKSKTPDAKGFVASSFYTGLTATEFFFHTMGGREGL 855
Query: 652 VDTAVKTADTGYMSRRLIKALEDLSIHYDDTVRNSSGGVIQFHYGDDGMDPAQMEGKNGV 473
VDTAVKTADTGYMSRRL+KALEDLSI YD+TVRN++G ++QF YGDDGMDPA+MEGK+G
Sbjct: 856 VDTAVKTADTGYMSRRLMKALEDLSIQYDETVRNANGSIVQFLYGDDGMDPARMEGKDGF 915
Query: 472 PLNLDRLYLKIKATCPSSTHANLSPSEVLEIVNNRLSRHDMTPEGGCSDAFKKSLLDFFH 293
PLN +RL+LK+KATCP+ +A+LS ++ E V RL H+ + E GCSDAFK +L F
Sbjct: 916 PLNFNRLFLKVKATCPAGENASLSALQIEETV-KRLKEHNTSAE-GCSDAFKTNLSGFLE 973
Query: 292 KRITTMKNTRRLLQLDEEHVDKNNSVFLEKVAANISGVTSQQLQVFLETCISRYHLKKXX 113
+ KNTR L L EHV + N EK A NISG+TS+QLQVFL+TCISRY LK+
Sbjct: 974 ECKEKFKNTREALGLHGEHVGEENLDIQEKFAKNISGITSKQLQVFLDTCISRYQLKRIE 1033
Query: 112 XXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNITL 2
GEPGTQMTLKTFHFAGVASMN+TL
Sbjct: 1034 AGTAIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 1070
>ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group]
gi|38346223|emb|CAE02045.2| OJ990528_30.3 [Oryza sativa
Japonica Group] gi|38347455|emb|CAD41360.2|
OSJNBa0076N16.24 [Oryza sativa Japonica Group]
gi|113564746|dbj|BAF15089.1| Os04g0492300 [Oryza sativa
Japonica Group] gi|116310339|emb|CAH67354.1|
OSIGBa0130B08.14 [Oryza sativa Indica Group]
gi|116310740|emb|CAH67535.1| H0425E08.3 [Oryza sativa
Indica Group] gi|215768005|dbj|BAH00234.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|218195112|gb|EEC77539.1| hypothetical protein
OsI_16437 [Oryza sativa Indica Group]
Length = 1383
Score = 881 bits (2276), Expect = 0.0
Identities = 432/581 (74%), Positives = 492/581 (84%), Gaps = 6/581 (1%)
Frame = -3
Query: 1726 ADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDT 1547
ADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFL+TRKD
Sbjct: 486 ADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLVTRKDN 545
Query: 1546 FYDRAAFSLMCSYMGDAMDHVDLPTPALIKPIELWTGKQLFSVLVRPSANMRVYLNLTVL 1367
FYDR++FSL+CSY+GDAM+++DLPTPALIKPIELWTGKQLFSVLVRP+A +V+LNLTV
Sbjct: 546 FYDRSSFSLLCSYLGDAMENIDLPTPALIKPIELWTGKQLFSVLVRPNACTKVFLNLTVK 605
Query: 1366 EKNYSK------SGETMCPNDGFVYFRNSELVCGQLGKATLGNGNKDGLFSVLLRDYNAH 1205
EK Y E MCPNDGFVYFRNSEL+ GQ+GKATLGNGNKDG+FS L+RDYN+H
Sbjct: 606 EKIYKTPKGSTLEPEAMCPNDGFVYFRNSELLSGQVGKATLGNGNKDGMFSTLVRDYNSH 665
Query: 1204 AAASCMNRLAKLSARWIGNHGFSIGIDDVQPRGNLNREKKYSIEKGYEACDKLIQSYDKG 1025
AAASCMNRLAK SAR+IGNHGFSIG+DDVQP +LN+EKK I+ GY+ C LI SY KG
Sbjct: 666 AAASCMNRLAKFSARFIGNHGFSIGVDDVQPGEHLNQEKKMKIDGGYKDCHDLIASYSKG 725
Query: 1024 QLKLQPGCDAAQTLEAEITGVLNGIREATAKVCMDELHWRNSPLIMSQCGSKGSPINISQ 845
L+LQPGC+AAQTLE IT VLN IRE KVCM+ LHWRNSPLIMSQCGSKGSPINISQ
Sbjct: 726 ALRLQPGCNAAQTLEQSITRVLNEIREEAGKVCMNTLHWRNSPLIMSQCGSKGSPINISQ 785
Query: 844 MIACVGQQSVGGRRAPNGFIDRSLPHFPRKSKTPAAKGFVANSFYTGLTATEFFFHTMGG 665
M+ACVGQQSVGGRRAPNGFIDR+LPHFP SKTPAAKGFVANSFYTGLTATEFFFHTMGG
Sbjct: 786 MVACVGQQSVGGRRAPNGFIDRTLPHFPINSKTPAAKGFVANSFYTGLTATEFFFHTMGG 845
Query: 664 REGLVDTAVKTADTGYMSRRLIKALEDLSIHYDDTVRNSSGGVIQFHYGDDGMDPAQMEG 485
REGLVDTAVKTA+TGYMSRRL+K LEDLS+ YD TVRN+SGG++QF YGDDGMDPA+MEG
Sbjct: 846 REGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQTVRNASGGIVQFLYGDDGMDPAKMEG 905
Query: 484 KNGVPLNLDRLYLKIKATCPSSTHANLSPSEVLEIVNNRLSRHDMTPEGGCSDAFKKSLL 305
K+G PLNLD+L++K+ ATCP LSP E+L+I+N++LS HD + + GCS+ FK+ L
Sbjct: 906 KDGKPLNLDQLFMKVMATCPQRGQNTLSPGEILQILNDKLSEHDASSDDGCSEKFKQLLT 965
Query: 304 DFFHKRITTMKNTRRLLQLDEEHVDKNNSVFLEKVAANISGVTSQQLQVFLETCISRYHL 125
F RI +K+TRR L LDE+HV + +S F E +AANISG++ +QLQVFL+TC+SRYHL
Sbjct: 966 YFLEDRIKLLKSTRRALLLDEDHVGERHSSFEESIAANISGISVKQLQVFLDTCLSRYHL 1025
Query: 124 KKXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNITL 2
KK GEPGTQMTLKTFHFAGVASMN+TL
Sbjct: 1026 KKIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTL 1066
>ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Oryza
brachyantha]
Length = 1389
Score = 868 bits (2242), Expect = 0.0
Identities = 425/592 (71%), Positives = 495/592 (83%), Gaps = 17/592 (2%)
Frame = -3
Query: 1726 ADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDT 1547
ADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFL+TRKD
Sbjct: 486 ADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLVTRKDN 545
Query: 1546 FYDRAAFSLMCSYMGDAMDHVDLPTPALIKPIELWTGKQLFSVLVRPSANMRVYLNLTVL 1367
FYDR++F+L+CSY+GDAM+++DLPTPAL+KPIELWTGKQLFSVLVRP+A +V+LNLTV
Sbjct: 546 FYDRSSFTLLCSYLGDAMENIDLPTPALVKPIELWTGKQLFSVLVRPNACTKVFLNLTVK 605
Query: 1366 EKNYSKSGETMCPNDGFVYFRNSELVCGQLGKATLGNGNKDGLFSVLLRDYNAHAAASCM 1187
EK YSKS ETMCPNDGFVYFRNSEL+ GQ+GK TLGNGNKDG+FS+L+RDYN+HAAASCM
Sbjct: 606 EKIYSKSRETMCPNDGFVYFRNSELLSGQVGKKTLGNGNKDGMFSILVRDYNSHAAASCM 665
Query: 1186 NRLAKLSARWIGNHGFSIGIDDVQPRGNLNREKKYSIEKGYEACDKLIQSYDKGQLKLQP 1007
NRLAK SAR+IGNHGFSIG+DDV+P +L+++KK I++GY+ C LI S+ KG L LQP
Sbjct: 666 NRLAKFSARFIGNHGFSIGVDDVRPGEHLDQQKKKKIDEGYKECHDLITSFSKGALTLQP 725
Query: 1006 GCDAAQTLEAEITGVLNGIREATAKVCMDELHWRNSPLIMSQCGSKGSPINISQMIACVG 827
GC+AAQTLE +IT VLN IREA +CMD LHWRNSPLIMSQCGSKGSPINISQM+ CVG
Sbjct: 726 GCNAAQTLEHKITHVLNKIREAAGNICMDTLHWRNSPLIMSQCGSKGSPINISQMVVCVG 785
Query: 826 QQSVGGRRAPNGFIDRSLPHFPRKSKTPAAKGFVANSFYTGLT----------------- 698
QQSVGG RAPNGFIDR+LPHFP SKTPAAKGFVANSFY GLT
Sbjct: 786 QQSVGGHRAPNGFIDRTLPHFPINSKTPAAKGFVANSFYNGLTATEFFFHTMGGIYIVLP 845
Query: 697 ATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDDTVRNSSGGVIQFHYG 518
ATEFFFHTMGGREGLVDTAVKTA+TGYMSRRL+K LEDLS+ YD TVRN+SGG++QF YG
Sbjct: 846 ATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQTVRNASGGIVQFLYG 905
Query: 517 DDGMDPAQMEGKNGVPLNLDRLYLKIKATCPSSTHANLSPSEVLEIVNNRLSRHDMTPEG 338
DDGMDPA+MEG++G PLNLD+L++K+ ATCP LSP E+L+I+N++LS HD + +
Sbjct: 906 DDGMDPAKMEGEDGKPLNLDQLFMKVMATCPQRGQNTLSPGEILQILNDKLSEHDASSDD 965
Query: 337 GCSDAFKKSLLDFFHKRITTMKNTRRLLQLDEEHVDKNNSVFLEKVAANISGVTSQQLQV 158
GCS+ FK+ L DF RI +K+TRR L LDE HV K++S+ E +AANISG++++QLQV
Sbjct: 966 GCSEKFKQLLKDFLEDRIKLLKSTRRALCLDENHVGKDSSI-EESIAANISGISAKQLQV 1024
Query: 157 FLETCISRYHLKKXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNITL 2
FL+TC+SRYH KK GEPGTQMTLKTFHFAGVASMN+TL
Sbjct: 1025 FLDTCLSRYHSKKIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTL 1076
>ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [Sorghum bicolor]
gi|241937900|gb|EES11045.1| hypothetical protein
SORBIDRAFT_06g021120 [Sorghum bicolor]
Length = 1391
Score = 867 bits (2239), Expect = 0.0
Identities = 426/588 (72%), Positives = 491/588 (83%), Gaps = 13/588 (2%)
Frame = -3
Query: 1726 ADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDT 1547
ADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFL+TRKDT
Sbjct: 486 ADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLVTRKDT 545
Query: 1546 FYDRAAFSLMCSYMGDAMDHVDLPTPALIKPIELWTGKQLFSVLVRPSANMRVYLNLTVL 1367
FYDR++F+L+CSY+GDAM+++DLPTPALIKPIELWTGKQLFSVLVRP+A+ RV+LNL V
Sbjct: 546 FYDRSSFTLLCSYLGDAMENIDLPTPALIKPIELWTGKQLFSVLVRPNAHTRVFLNLAVQ 605
Query: 1366 EKNYSKSG-------------ETMCPNDGFVYFRNSELVCGQLGKATLGNGNKDGLFSVL 1226
EK YSK ETMCPNDG+VYFRNSEL+ GQ+GKATLGNGNKDGL+SVL
Sbjct: 606 EKIYSKKKGKKEAGEETMCGRETMCPNDGYVYFRNSELLSGQVGKATLGNGNKDGLYSVL 665
Query: 1225 LRDYNAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPRGNLNREKKYSIEKGYEACDKL 1046
LRDYN+HAAASCMNRLAK SAR+IGNHGFSIG+DDVQP +LNR+KK I+ GY+ C L
Sbjct: 666 LRDYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVQPGEHLNRQKKKEIDGGYKKCHDL 725
Query: 1045 IQSYDKGQLKLQPGCDAAQTLEAEITGVLNGIREATAKVCMDELHWRNSPLIMSQCGSKG 866
I + KG L L PGC+AAQTLE ITGVLN IR VCMD LHWRNSPLIMSQCGSKG
Sbjct: 726 ISLFAKGALALHPGCNAAQTLEHNITGVLNEIRSIAGNVCMDTLHWRNSPLIMSQCGSKG 785
Query: 865 SPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRKSKTPAAKGFVANSFYTGLTATEF 686
SPINISQM+ACVGQQSVGGRRAP+GF++R+LPHFP SKTPAAKGFVANSFYTGLTATEF
Sbjct: 786 SPINISQMVACVGQQSVGGRRAPDGFLNRTLPHFPINSKTPAAKGFVANSFYTGLTATEF 845
Query: 685 FFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDDTVRNSSGGVIQFHYGDDGM 506
FFHTMGGREGLVDTAVKTA+TGYMSRRL+K LEDLS+ YD TVRN+SGG++QF YGDDGM
Sbjct: 846 FFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQTVRNASGGIVQFLYGDDGM 905
Query: 505 DPAQMEGKNGVPLNLDRLYLKIKATCPSSTHANLSPSEVLEIVNNRLSRHDMTPEGGCSD 326
DPA+MEGK+G+PLNLD+L++K+ ATCP LSP + +++ ++L +HD + +GGCS+
Sbjct: 906 DPAKMEGKDGMPLNLDQLFMKVMATCPQRGSDTLSPEAIKQMLEDKLLQHDTSSDGGCSE 965
Query: 325 AFKKSLLDFFHKRITTMKNTRRLLQLDEEHVDKNNSVFLEKVAANISGVTSQQLQVFLET 146
FKK+L +F KRI MK TRR L L E+HV+K +S E VAA ISG++++QLQVFL+T
Sbjct: 966 EFKKNLTEFLDKRIELMKCTRRALHLHEDHVEKKDSCVEESVAAIISGISAKQLQVFLDT 1025
Query: 145 CISRYHLKKXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNITL 2
C+SRY KK GEPGTQMTLKTFHFAGVASMN+TL
Sbjct: 1026 CLSRYQSKKIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTL 1073
>gb|ACJ63311.1| RNA polymerase III large subunit [Papaver orientale]
Length = 554
Score = 866 bits (2238), Expect = 0.0
Identities = 429/537 (79%), Positives = 474/537 (88%), Gaps = 11/537 (2%)
Frame = -3
Query: 1699 LHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSL 1520
+HVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITR+DTFYDRA+FSL
Sbjct: 1 MHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRRDTFYDRASFSL 60
Query: 1519 MCSYMGDAMDHVDLPTPALIKPIELWTGKQLFSVLVRPSANMRVYLNLTVLEKNYSKSGE 1340
MCSYMGDAMD +DLPTPALIKP+ELWTGKQLF+VL+RP A MRV++NLTV EK+Y K E
Sbjct: 61 MCSYMGDAMDAIDLPTPALIKPVELWTGKQLFNVLIRPHAQMRVFVNLTVFEKSYIKGRE 120
Query: 1339 TMCPNDGFVYFRNSELVCGQLGKATLGNGNKDGLFSVLLRDYNAHAAASCMNRLAKLSAR 1160
T+CPNDGFVYFRNSEL+CGQLGKATLGNGNKDGLFSVLLRDY+AHAAASCMNRLAKLSAR
Sbjct: 121 TLCPNDGFVYFRNSELICGQLGKATLGNGNKDGLFSVLLRDYDAHAAASCMNRLAKLSAR 180
Query: 1159 WIGNHGFSIGIDDVQPRGNLNREKKYSIEKGYEACDKLIQSYDKGQLKLQPGCDAAQTLE 980
WIGN GFSIGI DVQP +L+ +K+ I+KG E CDKLI+ Y G+L+LQPGCDAAQTLE
Sbjct: 181 WIGNQGFSIGISDVQPGKSLSDKKQKKIDKGKEKCDKLIEHYKTGKLELQPGCDAAQTLE 240
Query: 979 AEITGVLNGIREATAKVCMDELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRA 800
AEITG+ N IRE A VCM+ LHWRNSPLIMSQCGSKGSP NI+QMIACVGQQSVGGRRA
Sbjct: 241 AEITGIQNNIREKAATVCMENLHWRNSPLIMSQCGSKGSPSNITQMIACVGQQSVGGRRA 300
Query: 799 PNGFIDRSLPHFPRKSKTPAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTADTG 620
NGFIDRSLPHFPR S TP AKGFV NSFYTGLTATEFFFHTMGGREGLVDTAVKTADTG
Sbjct: 301 MNGFIDRSLPHFPRNSVTPDAKGFVENSFYTGLTATEFFFHTMGGREGLVDTAVKTADTG 360
Query: 619 YMSRRLIKALEDLSIHYDDTVRNSSGGVIQFHYGDDGMDPAQMEGKNGVPLNLDRLYLKI 440
YMSRRLIKALEDLSIHYD TVR++SGGV+QF YGDDGMDP++MEGK+G PLNLDRLY+K+
Sbjct: 361 YMSRRLIKALEDLSIHYDSTVRSASGGVVQFLYGDDGMDPSRMEGKDGTPLNLDRLYMKV 420
Query: 439 KATCPSSTHANLSPSEVLEIVNNRLSRHDMTPEGGCSDAFKKSLLD-----------FFH 293
KATCP+ H++LSP+E+L++V RLS+HDMTPEGGCSDAFKKSLLD F
Sbjct: 421 KATCPARGHSSLSPAEILKLVVARLSKHDMTPEGGCSDAFKKSLLDEEGFMQNKEGGFLG 480
Query: 292 KRITTMKNTRRLLQLDEEHVDKNNSVFLEKVAANISGVTSQQLQVFLETCISRYHLK 122
K IT++KNTRR LQLD K S LEKV+ANI+G+T QQLQVFLETCISRYHLK
Sbjct: 481 KCITSLKNTRRDLQLDGV---KKGSESLEKVSANIAGITLQQLQVFLETCISRYHLK 534
>ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Cucumis
sativus]
Length = 1400
Score = 866 bits (2237), Expect = 0.0
Identities = 438/590 (74%), Positives = 484/590 (82%), Gaps = 15/590 (2%)
Frame = -3
Query: 1726 ADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDT 1547
ADFDGDEMN+HVPQTEEARTEA++LMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDT
Sbjct: 492 ADFDGDEMNMHVPQTEEARTEAILLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDT 551
Query: 1546 FYDRAAFSLMCSYMGDAMDHVDLPTPALIKPIELWTGKQLFSVLVRPSANMRVYLNLTVL 1367
FYDRAAFSLMCSYMGD MD VDLPTPAL+KPIELWTGKQLFSVLVRP A+M+VYLNLTV
Sbjct: 552 FYDRAAFSLMCSYMGDGMDLVDLPTPALVKPIELWTGKQLFSVLVRPHASMKVYLNLTVK 611
Query: 1366 EKNYSK------SGETMCPNDGFVYFRNSELVCGQLGKATLGNGNKDGLFSVLLRDYNAH 1205
EK+YSK ETMCPNDGFVYFRNSEL+ GQ+GKATLGNGNKDGL+SVLLRDY AH
Sbjct: 612 EKSYSKVKGNEKERETMCPNDGFVYFRNSELISGQVGKATLGNGNKDGLYSVLLRDYKAH 671
Query: 1204 AAASCMNRLAKLSARWIGNHGFSIGIDDVQPRGNLNREKKYSIEKGYEACDKLIQSYDKG 1025
AAA CMNRLAKLSARWIGNHGFSIGIDDVQP L ++K+ +I +GY CDK I ++ G
Sbjct: 672 AAAVCMNRLAKLSARWIGNHGFSIGIDDVQPGDQLVKKKQTTILEGYRDCDKQINLFNTG 731
Query: 1024 QLKLQPGCDAAQTLEAEITGVLNGIREATAKVCMDELHWRNSPLIMSQCGSKGSPINISQ 845
L + GCDAAQ+LE++IT +LNGIREATA VCM LHWRNSPLIMSQCGSKGSPINISQ
Sbjct: 732 NLPPEAGCDAAQSLESKITQILNGIREATANVCMQNLHWRNSPLIMSQCGSKGSPINISQ 791
Query: 844 MIACVGQQSVGGRRAPNGFIDRSLPHFPRKSKTPAAKGFVANSFYTGLTATEFFFHTMGG 665
M+ACVGQQSVGGRRAP+GFIDRSLPHF RK+KTPAAKGFVANSFY+GLTATEFFFHTMGG
Sbjct: 792 MVACVGQQSVGGRRAPDGFIDRSLPHFRRKAKTPAAKGFVANSFYSGLTATEFFFHTMGG 851
Query: 664 REGLVDTAVKTADTGYMSRRLIKALEDLSIHYDDTVRNSSGGVIQFHYGDDGMDPAQMEG 485
REGLVDTAVKTADTGYMSRRLIKALEDLSIHYD +VRN+ G ++QF YGDDGMDPAQMEG
Sbjct: 852 REGLVDTAVKTADTGYMSRRLIKALEDLSIHYDSSVRNAGGCIVQFCYGDDGMDPAQMEG 911
Query: 484 KNGVPLNLDRLYLKIKATCPSSTHANLSPSEVLEIVNNRLSRHDMTPEGGCSDAFKKSLL 305
K+G PLN +RL+LK KATCPS + LSPSE E V +RLS+ D +PE GCS AF SL
Sbjct: 912 KSGAPLNFERLFLKAKATCPSDGNKILSPSEFSETVEDRLSKDDASPECGCSPAFVGSLK 971
Query: 304 DFFHKRITTMKNTRRLLQLDEEHV---------DKNNSVFLEKVAANISGVTSQQLQVFL 152
F +K + K + L D E D +N V KV NI+GVT +QLQVFL
Sbjct: 972 IFLNKYVEAQKKSWGTLLADNESAVDKSIISSSDNDNIVIRNKVVQNIAGVTHRQLQVFL 1031
Query: 151 ETCISRYHLKKXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNITL 2
+TC+SRYH KK GEPGTQMTLKTFHFAGVASMN+TL
Sbjct: 1032 DTCLSRYHTKKIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTL 1081
>ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
X2 [Solanum tuberosum]
Length = 1243
Score = 864 bits (2233), Expect = 0.0
Identities = 424/576 (73%), Positives = 486/576 (84%), Gaps = 1/576 (0%)
Frame = -3
Query: 1726 ADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDT 1547
ADFDGDEMN+HVPQTEEARTEALMLMGVQNNLCTPK+GEILVASTQDFLTSSFLITRKDT
Sbjct: 493 ADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKSGEILVASTQDFLTSSFLITRKDT 552
Query: 1546 FYDRAAFSLMCSYMGDAMDHVDLPTPALIKPIELWTGKQLFSVLVRPSANMRVYLNLTVL 1367
FY+RA+FSL+CSYMGDAMD DLP+PA IKP+ELWTGKQLF +L+RP + MRVY+NLTV
Sbjct: 553 FYNRASFSLICSYMGDAMDPTDLPSPAFIKPVELWTGKQLFHMLLRPYSKMRVYVNLTVT 612
Query: 1366 EKNYSKSGETMCPNDGFVYFRNSELVCGQLGKATLGNGNKDGLFSVLLRDYNAHAAASCM 1187
EK+YS GETMCP+DGFVYFRNSEL+ GQLGKATLGNGNKDGL+SVLLRDY +HAAA+CM
Sbjct: 613 EKSYSGKGETMCPSDGFVYFRNSELISGQLGKATLGNGNKDGLYSVLLRDYKSHAAATCM 672
Query: 1186 NRLAKLSARWIGNHGFSIGIDDVQPRGNLNREKKYSIEKGYEACDKLIQSYDKGQLKLQP 1007
NRLAKLSARWIGNHGFSIGIDDV P NL ++K+ I + Y+ C+ I +++G+L +QP
Sbjct: 673 NRLAKLSARWIGNHGFSIGIDDVTPGENLVKQKQGEIHRNYKKCEDCITQFNEGKLAVQP 732
Query: 1006 GCDAAQTLEAEITGVLNGIREATAKVCMDELHWRNSPLIMSQCGSKGSPINISQMIACVG 827
GCDAAQTLEAE+T LN +R+ K+CM L WRNSPLIMSQCGSKGSPINISQMIACVG
Sbjct: 733 GCDAAQTLEAEVTMSLNKVRDDIGKICMKALDWRNSPLIMSQCGSKGSPINISQMIACVG 792
Query: 826 QQSVGGRRAPNGFIDRSLPHFPRKSKTPAAKGFVANSFYTGLTATEFFFHTMGGREGLVD 647
QQSVGGRRAP+GFIDRSLPHFP KSK PAAKGFVA+SF+ GL+ATEFFFHTMGGREGLVD
Sbjct: 793 QQSVGGRRAPDGFIDRSLPHFPFKSKFPAAKGFVAHSFFDGLSATEFFFHTMGGREGLVD 852
Query: 646 TAVKTADTGYMSRRLIKALEDLSIHYDDTVRNSSGGVIQFHYGDDGMDPAQMEGKNGVPL 467
TAVKTADTGYMSRRL+KALEDL+++YD TVRN+S ++QF YGDDGMDP+QME K G PL
Sbjct: 853 TAVKTADTGYMSRRLMKALEDLAVYYDSTVRNASACIVQFMYGDDGMDPSQMEEKKGRPL 912
Query: 466 NLDRLYLKIKATCPSSTHANLSPSEVLEIVNNRLSRHDMTPEGGCSDAFKKSLLDFFHKR 287
N RL++K+KATCP +LS SE+ EIVN RLS HDMTPEGGCS+AF+ SL DF K
Sbjct: 913 NFSRLFMKVKATCPPGGEKSLSYSEICEIVNERLSYHDMTPEGGCSEAFRSSLSDFLIKN 972
Query: 286 IT-TMKNTRRLLQLDEEHVDKNNSVFLEKVAANISGVTSQQLQVFLETCISRYHLKKXXX 110
+ T+KN R L L EE + ++ +LEK+A NISG+T +QLQVFL TCISRYHLK+
Sbjct: 973 LAETLKNLRESLLLGEEQYEGDDRGYLEKIALNISGITKRQLQVFLNTCISRYHLKRLEA 1032
Query: 109 XXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNITL 2
GEPGTQMTLKTFHFAGVASMN+TL
Sbjct: 1033 GTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTL 1068
>ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
X1 [Solanum tuberosum]
Length = 1394
Score = 864 bits (2233), Expect = 0.0
Identities = 424/576 (73%), Positives = 486/576 (84%), Gaps = 1/576 (0%)
Frame = -3
Query: 1726 ADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDT 1547
ADFDGDEMN+HVPQTEEARTEALMLMGVQNNLCTPK+GEILVASTQDFLTSSFLITRKDT
Sbjct: 493 ADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKSGEILVASTQDFLTSSFLITRKDT 552
Query: 1546 FYDRAAFSLMCSYMGDAMDHVDLPTPALIKPIELWTGKQLFSVLVRPSANMRVYLNLTVL 1367
FY+RA+FSL+CSYMGDAMD DLP+PA IKP+ELWTGKQLF +L+RP + MRVY+NLTV
Sbjct: 553 FYNRASFSLICSYMGDAMDPTDLPSPAFIKPVELWTGKQLFHMLLRPYSKMRVYVNLTVT 612
Query: 1366 EKNYSKSGETMCPNDGFVYFRNSELVCGQLGKATLGNGNKDGLFSVLLRDYNAHAAASCM 1187
EK+YS GETMCP+DGFVYFRNSEL+ GQLGKATLGNGNKDGL+SVLLRDY +HAAA+CM
Sbjct: 613 EKSYSGKGETMCPSDGFVYFRNSELISGQLGKATLGNGNKDGLYSVLLRDYKSHAAATCM 672
Query: 1186 NRLAKLSARWIGNHGFSIGIDDVQPRGNLNREKKYSIEKGYEACDKLIQSYDKGQLKLQP 1007
NRLAKLSARWIGNHGFSIGIDDV P NL ++K+ I + Y+ C+ I +++G+L +QP
Sbjct: 673 NRLAKLSARWIGNHGFSIGIDDVTPGENLVKQKQGEIHRNYKKCEDCITQFNEGKLAVQP 732
Query: 1006 GCDAAQTLEAEITGVLNGIREATAKVCMDELHWRNSPLIMSQCGSKGSPINISQMIACVG 827
GCDAAQTLEAE+T LN +R+ K+CM L WRNSPLIMSQCGSKGSPINISQMIACVG
Sbjct: 733 GCDAAQTLEAEVTMSLNKVRDDIGKICMKALDWRNSPLIMSQCGSKGSPINISQMIACVG 792
Query: 826 QQSVGGRRAPNGFIDRSLPHFPRKSKTPAAKGFVANSFYTGLTATEFFFHTMGGREGLVD 647
QQSVGGRRAP+GFIDRSLPHFP KSK PAAKGFVA+SF+ GL+ATEFFFHTMGGREGLVD
Sbjct: 793 QQSVGGRRAPDGFIDRSLPHFPFKSKFPAAKGFVAHSFFDGLSATEFFFHTMGGREGLVD 852
Query: 646 TAVKTADTGYMSRRLIKALEDLSIHYDDTVRNSSGGVIQFHYGDDGMDPAQMEGKNGVPL 467
TAVKTADTGYMSRRL+KALEDL+++YD TVRN+S ++QF YGDDGMDP+QME K G PL
Sbjct: 853 TAVKTADTGYMSRRLMKALEDLAVYYDSTVRNASACIVQFMYGDDGMDPSQMEEKKGRPL 912
Query: 466 NLDRLYLKIKATCPSSTHANLSPSEVLEIVNNRLSRHDMTPEGGCSDAFKKSLLDFFHKR 287
N RL++K+KATCP +LS SE+ EIVN RLS HDMTPEGGCS+AF+ SL DF K
Sbjct: 913 NFSRLFMKVKATCPPGGEKSLSYSEICEIVNERLSYHDMTPEGGCSEAFRSSLSDFLIKN 972
Query: 286 IT-TMKNTRRLLQLDEEHVDKNNSVFLEKVAANISGVTSQQLQVFLETCISRYHLKKXXX 110
+ T+KN R L L EE + ++ +LEK+A NISG+T +QLQVFL TCISRYHLK+
Sbjct: 973 LAETLKNLRESLLLGEEQYEGDDRGYLEKIALNISGITKRQLQVFLNTCISRYHLKRLEA 1032
Query: 109 XXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNITL 2
GEPGTQMTLKTFHFAGVASMN+TL
Sbjct: 1033 GTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTL 1068
>gb|ACJ63308.1| RNA polymerase III large subunit [Drimys winteri]
Length = 547
Score = 861 bits (2225), Expect = 0.0
Identities = 415/547 (75%), Positives = 477/547 (87%), Gaps = 1/547 (0%)
Frame = -3
Query: 1699 LHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSL 1520
LHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDR F L
Sbjct: 1 LHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRDTFCL 60
Query: 1519 MCSYMGDAMDHVDLPTPALIKPIELWTGKQLFSVLVRPSANMRVYLNLTVLEKNYSKSGE 1340
MCS+MGD M+H+DLPTPALIKP+ELWTGKQ+FSVL+RP A+MRVY+NLTV+EKNYSKSGE
Sbjct: 61 MCSFMGDVMEHIDLPTPALIKPMELWTGKQIFSVLIRPQAHMRVYVNLTVVEKNYSKSGE 120
Query: 1339 TMCPNDGFVYFRNSELVCGQLGKATLGNGNKDGLFSVLLRDYNAHAAASCMNRLAKLSAR 1160
T CP DG+VYFRNSEL+CGQLGKATLGNGNKDGLFSVLLRDY+AHAAASCMNRLA+LSAR
Sbjct: 121 TRCPKDGYVYFRNSELICGQLGKATLGNGNKDGLFSVLLRDYDAHAAASCMNRLAELSAR 180
Query: 1159 WIGNHGFSIGIDDVQPRGNLNREKKYSIEKGYEACDKLIQSYDKGQLKLQPGCDAAQTLE 980
WIG+HGFSIGI+DVQP +LN +KK +IEKGYE CD LI SY+KG L LQ GC+AAQTLE
Sbjct: 181 WIGDHGFSIGIEDVQPDEHLNHQKKTTIEKGYEECDNLILSYNKGTLALQSGCNAAQTLE 240
Query: 979 AEITGVLNGIREATAKVCMDELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRA 800
+ ITGVLN +R+ A VCMD LHWRNSPLIMS CGSKGSPINISQM+ACVGQQSVGGRRA
Sbjct: 241 SRITGVLNKVRDTAANVCMDTLHWRNSPLIMSCCGSKGSPINISQMVACVGQQSVGGRRA 300
Query: 799 PNGFIDRSLPHFPRKSKTPAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTADTG 620
P+GFI+RSLPHF R SKTPAAKGFVANSFY+GLT TEF FHTMGGREGLVDTAVKTA+TG
Sbjct: 301 PDGFINRSLPHFHRNSKTPAAKGFVANSFYSGLTPTEFLFHTMGGREGLVDTAVKTAETG 360
Query: 619 YMSRRLIKALEDLSIHYDDTVRNSSGGVIQFHYGDDGMDPAQMEGKNGVPLNLDRLYLKI 440
YMSRRL+KALEDLSIHYD+TVRN+SGG++QFHYGDDGMDPA+MEGK+G PLNLDRL++KI
Sbjct: 361 YMSRRLMKALEDLSIHYDETVRNASGGIVQFHYGDDGMDPAKMEGKSGTPLNLDRLFMKI 420
Query: 439 KATCPSSTHA-NLSPSEVLEIVNNRLSRHDMTPEGGCSDAFKKSLLDFFHKRITTMKNTR 263
+ATCP++ + LSPSE+ + N+RLS+HD TPEGGCS AFK+ LLDF H++I T++N
Sbjct: 421 QATCPTTNASIPLSPSEISQYANDRLSKHDATPEGGCSSAFKQMLLDFIHEKIATLRNVS 480
Query: 262 RLLQLDEEHVDKNNSVFLEKVAANISGVTSQQLQVFLETCISRYHLKKXXXXXXXXXXXX 83
R+LQ+D+ + ++ L+ +AA I ++SQQL+VFLE CISRYHLK+
Sbjct: 481 RILQIDDNYGGDSDGDMLQTIAAKIFSISSQQLKVFLEACISRYHLKRIEAGTAIGAIGA 540
Query: 82 XXXGEPG 62
GEPG
Sbjct: 541 QSIGEPG 547
>ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Setaria
italica]
Length = 1397
Score = 860 bits (2223), Expect = 0.0
Identities = 422/591 (71%), Positives = 491/591 (83%), Gaps = 16/591 (2%)
Frame = -3
Query: 1726 ADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDT 1547
ADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFL+TRKD
Sbjct: 489 ADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLVTRKDA 548
Query: 1546 FYDRAAFSLMCSYMGDAMDHVDLPTPALIKPIELWTGKQLFSVLVRPSANMRVYLNLTVL 1367
FYDR++F+L+CSY+GDAM+++DLPTPALIKPIELWTGKQLFSVLVRP+A +V+LNL V
Sbjct: 549 FYDRSSFALLCSYVGDAMENIDLPTPALIKPIELWTGKQLFSVLVRPNARTKVFLNLAVK 608
Query: 1366 EKNYSKSGE----------------TMCPNDGFVYFRNSELVCGQLGKATLGNGNKDGLF 1235
EK YSK E TMCPNDG+VYFRNSEL+ GQ+GKATLGNGNKDG++
Sbjct: 609 EKIYSKKKEKKEGEEEEKETMCGRETMCPNDGYVYFRNSELLSGQVGKATLGNGNKDGIY 668
Query: 1234 SVLLRDYNAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPRGNLNREKKYSIEKGYEAC 1055
SVLLRDYN+HAAASCMNRLAK SAR+IGNHGFSIG+DDVQP +LNR+KK I++GY+ C
Sbjct: 669 SVLLRDYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVQPGEHLNRQKKKKIDEGYKQC 728
Query: 1054 DKLIQSYDKGQLKLQPGCDAAQTLEAEITGVLNGIREATAKVCMDELHWRNSPLIMSQCG 875
LI + KG L L PGC+AAQTLE +ITGVLN IR A VCMD LHWRNSPLIMSQCG
Sbjct: 729 HDLISLFAKGALALHPGCNAAQTLEHKITGVLNEIRTAAGNVCMDTLHWRNSPLIMSQCG 788
Query: 874 SKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRKSKTPAAKGFVANSFYTGLTA 695
SKGSPINISQM+ACVGQQSVGGRRAP+GFIDR+LPHFP SKTPAAKGFVANSFYTGLTA
Sbjct: 789 SKGSPINISQMVACVGQQSVGGRRAPDGFIDRTLPHFPINSKTPAAKGFVANSFYTGLTA 848
Query: 694 TEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDDTVRNSSGGVIQFHYGD 515
TEFFFHTMGGREGLVDTAVKTA+TGYMSRRL+K LEDLS+ YD TVRN+SGG++QF YGD
Sbjct: 849 TEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQTVRNASGGIVQFLYGD 908
Query: 514 DGMDPAQMEGKNGVPLNLDRLYLKIKATCPSSTHANLSPSEVLEIVNNRLSRHDMTPEGG 335
DGMDPA+MEGK+G PLNLD+L++K+ ATCP LSP ++ +++ ++L++H + +GG
Sbjct: 909 DGMDPAKMEGKDGTPLNLDQLFMKVTATCPHRGLDTLSPDDIKQMLEDKLTQHKTSSDGG 968
Query: 334 CSDAFKKSLLDFFHKRITTMKNTRRLLQLDEEHVDKNNSVFLEKVAANISGVTSQQLQVF 155
CS+ FK+ L F +RI +K TR+ L LDE+HV KN+S E +AANISG++++QLQVF
Sbjct: 969 CSEEFKECLKKFLEERIQLLKCTRKALHLDEKHVGKNDSCIEEIIAANISGISAKQLQVF 1028
Query: 154 LETCISRYHLKKXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNITL 2
L+TC SRY+ K GEPGTQMTLKTFHFAGVASMN+TL
Sbjct: 1029 LDTCFSRYNSKAIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTL 1079
>gb|ACJ63310.1| RNA polymerase III large subunit [Liriodendron tulipifera]
Length = 546
Score = 860 bits (2221), Expect = 0.0
Identities = 431/549 (78%), Positives = 471/549 (85%), Gaps = 3/549 (0%)
Frame = -3
Query: 1699 LHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSL 1520
L+VPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSL
Sbjct: 1 LYVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSL 60
Query: 1519 MCSYMGDAMDHVDLPTPALIKPIELWTGKQLFSVLVRPSANMRVYLNLTVLEKNYSKSGE 1340
MCSYMGD MD +DLPTPAL+KPIELWTGKQLFSVL+RP A MRVYLNLT+ E+ Y KS +
Sbjct: 61 MCSYMGDGMDPIDLPTPALLKPIELWTGKQLFSVLIRPHARMRVYLNLTLTERIYDKSKD 120
Query: 1339 --TMCPNDGFVYFRNSELVCGQLGKATLGNGNKDGLFSVLLRDYNAHAAASCMNRLAKLS 1166
TMCPNDG+VYFRNSEL+CGQLGKATLGNGNKDGLFSVLLRDY AHAAASCMNRLAKLS
Sbjct: 121 KKTMCPNDGYVYFRNSELLCGQLGKATLGNGNKDGLFSVLLRDYGAHAAASCMNRLAKLS 180
Query: 1165 ARWIGNHGFSIGIDDVQPRGNLNREKKYSIEKGYEACDKLIQSYDKGQLKLQPGCDAAQT 986
ARWIGNHGFSIGIDDVQP +LNR KK IEKGY+ CD LI Y+ G LKL PGC+AAQT
Sbjct: 181 ARWIGNHGFSIGIDDVQPGEHLNRNKKLEIEKGYKECDDLINRYNTGGLKLLPGCNAAQT 240
Query: 985 LEAEITGVLNGIREATAKVCMDELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGR 806
LE+ ITG LN IREA AKVCM LHWRNSPLIMSQCGSKGSPINISQM+ACVGQQSVGGR
Sbjct: 241 LESNITGKLNDIREAAAKVCMASLHWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGR 300
Query: 805 RAPNGFIDRSLPHFPRKSKTPAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAD 626
RAPNGFIDRSLPHFP SKTP+AKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTA+
Sbjct: 301 RAPNGFIDRSLPHFPINSKTPSAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAE 360
Query: 625 TGYMSRRLIKALEDLSIHYDDTVRNSSGGVIQFHYGDDGMDPAQMEGKNGVPLNLDRLYL 446
TGYMSRRL+K+LEDLS +YD+TVRNSSGG++Q YGDDGMDPA MEGK G+PLNLDRL++
Sbjct: 361 TGYMSRRLMKSLEDLSTYYDETVRNSSGGIVQLLYGDDGMDPANMEGKEGMPLNLDRLFM 420
Query: 445 KIKATCPSS-THANLSPSEVLEIVNNRLSRHDMTPEGGCSDAFKKSLLDFFHKRITTMKN 269
K KAT P++ H +LSPSE+L+ ++RLS+HDMTPEGGCS AFK+SL DF K + ++
Sbjct: 421 KTKATFPATRAHTSLSPSEILKAADDRLSKHDMTPEGGCSAAFKESLSDFLKKCVVALRK 480
Query: 268 TRRLLQLDEEHVDKNNSVFLEKVAANISGVTSQQLQVFLETCISRYHLKKXXXXXXXXXX 89
TRR L LDE DK LE VAANISG+TSQQLQVFLETCI RYHLK+
Sbjct: 481 TRRELGLDE---DKVREHVLENVAANISGITSQQLQVFLETCIHRYHLKRLEAGAAIGAI 537
Query: 88 XXXXXGEPG 62
GEPG
Sbjct: 538 GAQSIGEPG 546
>gb|EXB53229.1| DNA-directed RNA polymerase III subunit RPC1 [Morus notabilis]
Length = 1179
Score = 859 bits (2219), Expect = 0.0
Identities = 428/582 (73%), Positives = 475/582 (81%), Gaps = 7/582 (1%)
Frame = -3
Query: 1726 ADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDT 1547
ADFDGDEMN+HVPQTEEARTEA++LMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDT
Sbjct: 277 ADFDGDEMNMHVPQTEEARTEAILLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDT 336
Query: 1546 FYDRAAFSLMCSYMGDAMDHVDLPTPALIKPIELWTGKQLFSVLVRPSANMRVYLNLTVL 1367
FYDRAAFSLMCSYMGDAM+H DLPTPA+IKP+ELWTGKQLFSVLVRP+AN+RV+LNLTV
Sbjct: 337 FYDRAAFSLMCSYMGDAMEHNDLPTPAVIKPVELWTGKQLFSVLVRPNANVRVFLNLTVR 396
Query: 1366 EKNYS-------KSGETMCPNDGFVYFRNSELVCGQLGKATLGNGNKDGLFSVLLRDYNA 1208
EKNYS + ETMCP DGFV FRNSEL+ GQLGK TLGNGNKDGL+S+LLRDY A
Sbjct: 397 EKNYSNKLQENEREFETMCPADGFVCFRNSELISGQLGKGTLGNGNKDGLYSILLRDYKA 456
Query: 1207 HAAASCMNRLAKLSARWIGNHGFSIGIDDVQPRGNLNREKKYSIEKGYEACDKLIQSYDK 1028
HAAA+CMNRLAKLSARWIGNHGFSIGIDDVQP L EK I +G + CD I+SY +
Sbjct: 457 HAAAACMNRLAKLSARWIGNHGFSIGIDDVQPSDKLRDEKDQKINEGAKDCDDKIKSYKE 516
Query: 1027 GQLKLQPGCDAAQTLEAEITGVLNGIREATAKVCMDELHWRNSPLIMSQCGSKGSPINIS 848
G L +PGCDAAQ+LEA ITG+LN IRE T K+CM L WRNSPLIMSQCGSKGS INIS
Sbjct: 517 GNLPPEPGCDAAQSLEAVITGILNKIREETGKLCMKALPWRNSPLIMSQCGSKGSLINIS 576
Query: 847 QMIACVGQQSVGGRRAPNGFIDRSLPHFPRKSKTPAAKGFVANSFYTGLTATEFFFHTMG 668
QM+ACVGQQSVGGRRAPNGFIDRSLPHFPRK KTPAAKGFV++SFY GL+ATEFFFHTMG
Sbjct: 577 QMVACVGQQSVGGRRAPNGFIDRSLPHFPRKDKTPAAKGFVSHSFYDGLSATEFFFHTMG 636
Query: 667 GREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDDTVRNSSGGVIQFHYGDDGMDPAQME 488
GREGLVDTAVKTADTGYMSRRLIKALEDL +HYD+TVRN+S +IQF YGDDGMDPA ME
Sbjct: 637 GREGLVDTAVKTADTGYMSRRLIKALEDLFVHYDNTVRNASACIIQFCYGDDGMDPAHME 696
Query: 487 GKNGVPLNLDRLYLKIKATCPSSTHANLSPSEVLEIVNNRLSRHDMTPEGGCSDAFKKSL 308
GKNG PLN +RL+LK KATCP+ LSP +V E+V +RLS+ DMTPEGGCS AFK SL
Sbjct: 697 GKNGAPLNFERLFLKAKATCPAGGTEKLSPEKVSELVESRLSKKDMTPEGGCSAAFKNSL 756
Query: 307 LDFFHKRITTMKNTRRLLQLDEEHVDKNNSVFLEKVAANISGVTSQQLQVFLETCISRYH 128
F + K T + E H NS + + +SG T++QL+VFL+TCISRYH
Sbjct: 757 KSFLDNYVKAFKRTWDPCESTEGHAKMENSATTKNIVLQLSGATARQLEVFLDTCISRYH 816
Query: 127 LKKXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNITL 2
KK GEPGTQMTLKTFHFAGVASMN+TL
Sbjct: 817 SKKIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTL 858
>ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Solanum
lycopersicum]
Length = 1390
Score = 857 bits (2215), Expect = 0.0
Identities = 421/576 (73%), Positives = 484/576 (84%), Gaps = 1/576 (0%)
Frame = -3
Query: 1726 ADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDT 1547
ADFDGDEMN+HVPQTEEARTEALMLMGVQNNLCTPK+GEILVASTQDFLTSSFLITRKDT
Sbjct: 493 ADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKSGEILVASTQDFLTSSFLITRKDT 552
Query: 1546 FYDRAAFSLMCSYMGDAMDHVDLPTPALIKPIELWTGKQLFSVLVRPSANMRVYLNLTVL 1367
FY+RA+FSL+CSYMGDAMD DLP+PA IKP+ELWTGKQLF VL+RP + MRVY+NLT+
Sbjct: 553 FYNRASFSLICSYMGDAMDPTDLPSPAFIKPVELWTGKQLFHVLLRPYSKMRVYVNLTLT 612
Query: 1366 EKNYSKSGETMCPNDGFVYFRNSELVCGQLGKATLGNGNKDGLFSVLLRDYNAHAAASCM 1187
EK+YS GETMC +DGFVYFRNSEL+ GQLGKATLGNGNKDGL+SVLLRDY +HAAA+CM
Sbjct: 613 EKSYSGKGETMCSSDGFVYFRNSELISGQLGKATLGNGNKDGLYSVLLRDYESHAAATCM 672
Query: 1186 NRLAKLSARWIGNHGFSIGIDDVQPRGNLNREKKYSIEKGYEACDKLIQSYDKGQLKLQP 1007
NRLAKLSARWIGNHGFSIGIDDV P NL ++K+ I + Y+ C+ I +++G+L +QP
Sbjct: 673 NRLAKLSARWIGNHGFSIGIDDVTPGENLVKQKQGEIHRNYKKCEDCITQFNEGKLAVQP 732
Query: 1006 GCDAAQTLEAEITGVLNGIREATAKVCMDELHWRNSPLIMSQCGSKGSPINISQMIACVG 827
GCDAAQTLEAE+T LN +R+ K+CM L WRNSPLIMSQCGSKGSPINISQMIACVG
Sbjct: 733 GCDAAQTLEAEVTMSLNKVRDDIGKICMKALDWRNSPLIMSQCGSKGSPINISQMIACVG 792
Query: 826 QQSVGGRRAPNGFIDRSLPHFPRKSKTPAAKGFVANSFYTGLTATEFFFHTMGGREGLVD 647
QQSVGGRRAP+GFIDRSLPHFP KSK PAAKGFVA+SF+ GL+ATEFFFHTMGGREGLVD
Sbjct: 793 QQSVGGRRAPDGFIDRSLPHFPFKSKFPAAKGFVAHSFFDGLSATEFFFHTMGGREGLVD 852
Query: 646 TAVKTADTGYMSRRLIKALEDLSIHYDDTVRNSSGGVIQFHYGDDGMDPAQMEGKNGVPL 467
TAVKTADTGYMSRRL+KALEDL+++YD TVRN+S ++QF YGDDGMDP++ME K G PL
Sbjct: 853 TAVKTADTGYMSRRLMKALEDLAVYYDSTVRNASACIVQFMYGDDGMDPSRMEEKKGRPL 912
Query: 466 NLDRLYLKIKATCPSSTHANLSPSEVLEIVNNRLSRHDMTPEGGCSDAFKKSLLDFFHKR 287
N RL++K+KATCP +LS SE+ EIVN RLS HDMTPEGGCS+AF+ SL DF K
Sbjct: 913 NFSRLFMKVKATCPPGGEKSLSYSEICEIVNERLSYHDMTPEGGCSEAFRASLSDFLIKS 972
Query: 286 IT-TMKNTRRLLQLDEEHVDKNNSVFLEKVAANISGVTSQQLQVFLETCISRYHLKKXXX 110
+ T+KN R L L EE + ++ +LEK+ NISG+T +QLQVFL TCISRYHLK+
Sbjct: 973 LAETLKNLRESLLLGEEQYEGDDRGYLEKIVLNISGITKKQLQVFLNTCISRYHLKRLEA 1032
Query: 109 XXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNITL 2
GEPGTQMTLKTFHFAGVASMN+TL
Sbjct: 1033 GTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTL 1068
>ref|XP_004294640.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
[Fragaria vesca subsp. vesca]
Length = 1390
Score = 853 bits (2204), Expect = 0.0
Identities = 423/582 (72%), Positives = 478/582 (82%), Gaps = 7/582 (1%)
Frame = -3
Query: 1726 ADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDT 1547
ADFDGDEMN+HVPQTEEARTEA+MLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDT
Sbjct: 493 ADFDGDEMNMHVPQTEEARTEAVMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDT 552
Query: 1546 FYDRAAFSLMCSYMGDAMDHVDLPTPALIKPIELWTGKQLFSVLVRPSANMRVYLNLTVL 1367
FYDRA+FSLMCSYMGD +HVDLPTPA++KPIELWTGKQL+SVLVRP++N+RVYLNLTV
Sbjct: 553 FYDRASFSLMCSYMGDGTEHVDLPTPAVVKPIELWTGKQLYSVLVRPNSNVRVYLNLTVR 612
Query: 1366 EKNYS-------KSGETMCPNDGFVYFRNSELVCGQLGKATLGNGNKDGLFSVLLRDYNA 1208
EK+YS + E MCPNDGFVYFRNSEL+ GQLGK TLGNGNKDGLFSVLLRDY A
Sbjct: 613 EKSYSNRKTEDGREIEAMCPNDGFVYFRNSELLSGQLGKGTLGNGNKDGLFSVLLRDYKA 672
Query: 1207 HAAASCMNRLAKLSARWIGNHGFSIGIDDVQPRGNLNREKKYSIEKGYEACDKLIQSYDK 1028
HAAASCMNR+AKLSARWIGNHGFSIGI DVQP L EK+ I+KGY+ CD I+ Y +
Sbjct: 673 HAAASCMNRVAKLSARWIGNHGFSIGISDVQPSDILYGEKEKIIKKGYDKCDDQIKLYKE 732
Query: 1027 GQLKLQPGCDAAQTLEAEITGVLNGIREATAKVCMDELHWRNSPLIMSQCGSKGSPINIS 848
GQL+L PGCDAAQ+LE+ IT VLN IR+ T K+CM LHWRNSPLIMSQCGSKGS INIS
Sbjct: 733 GQLRLAPGCDAAQSLESGITAVLNDIRDQTGKLCMQTLHWRNSPLIMSQCGSKGSAINIS 792
Query: 847 QMIACVGQQSVGGRRAPNGFIDRSLPHFPRKSKTPAAKGFVANSFYTGLTATEFFFHTMG 668
QM+ACVGQQSVGGRRAPNGFIDRSLPHFPRK TPAAKGFVA+SFY+GLTATEFFFHTMG
Sbjct: 793 QMVACVGQQSVGGRRAPNGFIDRSLPHFPRKVNTPAAKGFVASSFYSGLTATEFFFHTMG 852
Query: 667 GREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDDTVRNSSGGVIQFHYGDDGMDPAQME 488
GREGLVDTAVKTADTGYMSRRL K LEDLS+ YD TVR ++GG++QF YGDDGMDPA ME
Sbjct: 853 GREGLVDTAVKTADTGYMSRRLSKVLEDLSVQYDKTVRAANGGIVQFCYGDDGMDPAMME 912
Query: 487 GKNGVPLNLDRLYLKIKATCPSSTHANLSPSEVLEIVNNRLSRHDMTPEGGCSDAFKKSL 308
GK+G PL+ RL+ + KATCP+ +LSP EV EIV +RLS DMTP+GGCS FK S+
Sbjct: 913 GKSGAPLDFYRLFFRAKATCPAGESESLSPDEVSEIVRSRLSEQDMTPDGGCSMGFKSSI 972
Query: 307 LDFFHKRITTMKNTRRLLQLDEEHVDKNNSVFLEKVAANISGVTSQQLQVFLETCISRYH 128
F + + ++ T+ L++ + S L+ + NISGVT +QL+VFL+TCISRYH
Sbjct: 973 EQFLDEYVKALRKTQEAFLLNQSPGWEVKSATLQNIVQNISGVTPRQLKVFLDTCISRYH 1032
Query: 127 LKKXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNITL 2
KK GEPGTQMTLKTFHFAGVASMN+TL
Sbjct: 1033 SKKVDAGTAIGVIGAQSIGEPGTQMTLKTFHFAGVASMNVTL 1074
>ref|XP_003574945.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
[Brachypodium distachyon]
Length = 1392
Score = 845 bits (2183), Expect = 0.0
Identities = 415/588 (70%), Positives = 485/588 (82%), Gaps = 13/588 (2%)
Frame = -3
Query: 1726 ADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDT 1547
ADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKD
Sbjct: 486 ADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDN 545
Query: 1546 FYDRAAFSLMCSYMGDAMDHVDLPTPALIKPIELWTGKQLFSVLVRPSANMRVYLNLTVL 1367
FYDR+ F+L+CSY+GDAM+++DLPTPA+IKP+ELWTGKQLFSVLVRP+A +VYLNLTV
Sbjct: 546 FYDRSYFTLLCSYLGDAMENIDLPTPAIIKPLELWTGKQLFSVLVRPNACTKVYLNLTVE 605
Query: 1366 EKNYSKSGE-----------TMCPNDGFVYFRNSELVCGQLGKATLGNGNKDGLFSVLLR 1220
EK Y K E TMCPNDG+VYFRNSEL+ GQ+GK TLGNGNKDG+FSVL+R
Sbjct: 606 EKIYMKRRERDKNAVSVLEETMCPNDGYVYFRNSELLSGQVGKKTLGNGNKDGMFSVLVR 665
Query: 1219 DYNAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPRGNLNREKKYSIEKGYEACDKLIQ 1040
DYN+HAAASCMNRLAK SAR+IGNHGFSIG+DDVQP +LN++KK +I++GY C LI
Sbjct: 666 DYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVQPGESLNQKKKKTIDQGYTECHDLIA 725
Query: 1039 SYDKGQ--LKLQPGCDAAQTLEAEITGVLNGIREATAKVCMDELHWRNSPLIMSQCGSKG 866
Y KG +L PGC+ AQTLE ++ +LN +RE + CM+ LHWRNSPLIMSQCGSKG
Sbjct: 726 VYSKGAPGAELHPGCNRAQTLEVRVSAILNQLREKAGEHCMNTLHWRNSPLIMSQCGSKG 785
Query: 865 SPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRKSKTPAAKGFVANSFYTGLTATEF 686
SPINISQM+ CVGQQSVGGRRAP+GFIDR+LPHFP SKTPAAKGFVANSFYTGLTATEF
Sbjct: 786 SPINISQMVVCVGQQSVGGRRAPDGFIDRTLPHFPIHSKTPAAKGFVANSFYTGLTATEF 845
Query: 685 FFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDDTVRNSSGGVIQFHYGDDGM 506
FFHTMGGREGLVDTAVKTA+TGYMSRRL+K LEDLS+ YD TVRN+S G++QF YGDDGM
Sbjct: 846 FFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQTVRNASSGIVQFVYGDDGM 905
Query: 505 DPAQMEGKNGVPLNLDRLYLKIKATCPSSTHANLSPSEVLEIVNNRLSRHDMTPEGGCSD 326
DP +MEGK G PLNLD+L++K+KATCP H LSP +++++N++LS DM+ GGCSD
Sbjct: 906 DPVKMEGKGGSPLNLDQLFMKVKATCPQRGHDMLSPEAIMQMLNDKLSEQDMS-SGGCSD 964
Query: 325 AFKKSLLDFFHKRITTMKNTRRLLQLDEEHVDKNNSVFLEKVAANISGVTSQQLQVFLET 146
FK+ L FF RI +++TRR L LDE+HV +S E++AANISG++++QLQVFL+T
Sbjct: 965 KFKELLTKFFEDRIKMLRSTRRTLHLDEDHVGMKDSSIEERIAANISGISAKQLQVFLDT 1024
Query: 145 CISRYHLKKXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNITL 2
C+SRYH K GEPGTQMTLKTFHFAGVASMN+TL
Sbjct: 1025 CLSRYHSKIIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTL 1072
>gb|AAS79695.1| RNA polymerase III large subunit [Cycas revoluta]
Length = 548
Score = 840 bits (2171), Expect = 0.0
Identities = 411/548 (75%), Positives = 463/548 (84%)
Frame = -3
Query: 1705 MNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAF 1526
MNLHVPQTEEARTEALMLMGVQNNLCTPKNGEIL+ASTQDFLTSSFLITRKDTFYDRA F
Sbjct: 1 MNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILIASTQDFLTSSFLITRKDTFYDRATF 60
Query: 1525 SLMCSYMGDAMDHVDLPTPALIKPIELWTGKQLFSVLVRPSANMRVYLNLTVLEKNYSKS 1346
LMCSYMGDA++ +DLPTP ++KPIELWTGKQLFSVLVRP+AN+RV++NL + EKNYSKS
Sbjct: 61 CLMCSYMGDAVEPIDLPTPTILKPIELWTGKQLFSVLVRPNANVRVFVNLMLAEKNYSKS 120
Query: 1345 GETMCPNDGFVYFRNSELVCGQLGKATLGNGNKDGLFSVLLRDYNAHAAASCMNRLAKLS 1166
ETMCPNDGFVYFRNSEL+ GQ+GKATLGNGNKDGLF+VLLRDYN HAAAS MNRLAKLS
Sbjct: 121 RETMCPNDGFVYFRNSELISGQIGKATLGNGNKDGLFTVLLRDYNTHAAASSMNRLAKLS 180
Query: 1165 ARWIGNHGFSIGIDDVQPRGNLNREKKYSIEKGYEACDKLIQSYDKGQLKLQPGCDAAQT 986
ARWIGNHGFSIGIDDVQP L+ +K+ I++GY CD I Y+KG+L LQPGC+AAQT
Sbjct: 181 ARWIGNHGFSIGIDDVQPGTRLSAQKEERIKEGYSKCDMHIDLYNKGKLTLQPGCNAAQT 240
Query: 985 LEAEITGVLNGIREATAKVCMDELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGR 806
LEAEITG LN IRE VC+ ELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGR
Sbjct: 241 LEAEITGELNKIREIAGSVCLKELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGR 300
Query: 805 RAPNGFIDRSLPHFPRKSKTPAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAD 626
RAPNGFIDRSLPHFPR KTPAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTA+
Sbjct: 301 RAPNGFIDRSLPHFPRNDKTPAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAE 360
Query: 625 TGYMSRRLIKALEDLSIHYDDTVRNSSGGVIQFHYGDDGMDPAQMEGKNGVPLNLDRLYL 446
TGYMSRRL+KALEDLS HYD TVRN+SGG++Q YGDDGMDP MEGK+G PLNLDRL +
Sbjct: 361 TGYMSRRLMKALEDLSTHYDGTVRNASGGIVQLLYGDDGMDPVNMEGKDGTPLNLDRLLM 420
Query: 445 KIKATCPSSTHANLSPSEVLEIVNNRLSRHDMTPEGGCSDAFKKSLLDFFHKRITTMKNT 266
K KA CP++ +LSP+E+ + V RLS+HDMTPEGGCS AFK SL FF K I+ ++ T
Sbjct: 421 KTKAICPANGVISLSPAEISKRVEERLSKHDMTPEGGCSAAFKNSLAKFFEKHISVIRKT 480
Query: 265 RRLLQLDEEHVDKNNSVFLEKVAANISGVTSQQLQVFLETCISRYHLKKXXXXXXXXXXX 86
R L L + D +N LE++A++ISG+T++Q +VF+ETCI RYHLK+
Sbjct: 481 RCALGLPMDASDDSNFFILERIASDISGLTARQFEVFIETCIGRYHLKRMEAGAAIGAIG 540
Query: 85 XXXXGEPG 62
GEPG
Sbjct: 541 AQSIGEPG 548
>gb|AAS79696.1| RNA polymerase III large subunit [Zamia muricata]
Length = 548
Score = 839 bits (2167), Expect = 0.0
Identities = 411/548 (75%), Positives = 464/548 (84%)
Frame = -3
Query: 1705 MNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAF 1526
MNLHVPQTEEARTEAL LMGVQNNLCTPKNGEIL+ASTQDFLTSSFLITRKDTFYDRA+F
Sbjct: 1 MNLHVPQTEEARTEALTLMGVQNNLCTPKNGEILIASTQDFLTSSFLITRKDTFYDRASF 60
Query: 1525 SLMCSYMGDAMDHVDLPTPALIKPIELWTGKQLFSVLVRPSANMRVYLNLTVLEKNYSKS 1346
LMCSYMGDA + +DLPTP ++KP+ELWTGKQLFSVLVRP+AN+RV++NL + EKNYSKS
Sbjct: 61 CLMCSYMGDAAEPIDLPTPTILKPMELWTGKQLFSVLVRPNANVRVFVNLMLTEKNYSKS 120
Query: 1345 GETMCPNDGFVYFRNSELVCGQLGKATLGNGNKDGLFSVLLRDYNAHAAASCMNRLAKLS 1166
GETMCPNDGFVYFRNSEL+ GQ+GKATLGNGNKDGLF+VLLRDYN HAAAS MNRLAKLS
Sbjct: 121 GETMCPNDGFVYFRNSELISGQIGKATLGNGNKDGLFTVLLRDYNTHAAASSMNRLAKLS 180
Query: 1165 ARWIGNHGFSIGIDDVQPRGNLNREKKYSIEKGYEACDKLIQSYDKGQLKLQPGCDAAQT 986
ARWIGNHGFSIGIDDVQP L+ +K+ I++GY CD I Y+KG+L LQPGC+AAQT
Sbjct: 181 ARWIGNHGFSIGIDDVQPGTRLSAKKEERIKEGYSKCDMHIDLYNKGKLTLQPGCNAAQT 240
Query: 985 LEAEITGVLNGIREATAKVCMDELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGR 806
LEAEITG LN IRE VC+ ELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGR
Sbjct: 241 LEAEITGELNKIREVAGSVCLKELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGR 300
Query: 805 RAPNGFIDRSLPHFPRKSKTPAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAD 626
RAPNGFIDRSLPHFPR KTPAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTA+
Sbjct: 301 RAPNGFIDRSLPHFPRNDKTPAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAE 360
Query: 625 TGYMSRRLIKALEDLSIHYDDTVRNSSGGVIQFHYGDDGMDPAQMEGKNGVPLNLDRLYL 446
TGYMSRRL+KALEDLS HYD TVRN+SGG++Q YGDD MDP MEGKNG PLNLDR+ +
Sbjct: 361 TGYMSRRLMKALEDLSTHYDGTVRNASGGIVQLLYGDDAMDPVNMEGKNGTPLNLDRILM 420
Query: 445 KIKATCPSSTHANLSPSEVLEIVNNRLSRHDMTPEGGCSDAFKKSLLDFFHKRITTMKNT 266
K KATCP++ +LSPSE+ + V +RLS+HDMTPEGGCS AFK SL F K+I+ ++NT
Sbjct: 421 KAKATCPANGAFSLSPSEISKRVEDRLSKHDMTPEGGCSAAFKNSLAQFLEKQISLIQNT 480
Query: 265 RRLLQLDEEHVDKNNSVFLEKVAANISGVTSQQLQVFLETCISRYHLKKXXXXXXXXXXX 86
R +L L + N LE++A++ISG+T+QQ +VF+ETCI RYHLK+
Sbjct: 481 RCVLGLPMDANGDPNLSTLERIASDISGLTAQQFEVFMETCIRRYHLKRIEAGAAIGAIG 540
Query: 85 XXXXGEPG 62
GEPG
Sbjct: 541 AQSIGEPG 548
>ref|XP_003570766.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
[Brachypodium distachyon]
Length = 1400
Score = 838 bits (2166), Expect = 0.0
Identities = 412/586 (70%), Positives = 480/586 (81%), Gaps = 11/586 (1%)
Frame = -3
Query: 1726 ADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDT 1547
ADFDGDEMNLHVPQTEEARTEA +LMGVQ+NLCTPKNGEILVASTQDFLTSSFL+TRKDT
Sbjct: 491 ADFDGDEMNLHVPQTEEARTEAFLLMGVQSNLCTPKNGEILVASTQDFLTSSFLVTRKDT 550
Query: 1546 FYDRAAFSLMCSYMGDAMDHVDLPTPALIKPIELWTGKQLFSVLVRPSANMRVYLNLTVL 1367
FYDR+ F+L+CSY+GDAM+++DLPTPA+IKP+ELWTGKQLFSVLVRP+A +V+LNLTV
Sbjct: 551 FYDRSYFTLLCSYLGDAMENIDLPTPAIIKPVELWTGKQLFSVLVRPNACTKVFLNLTVE 610
Query: 1366 EKNYSKSGE-----------TMCPNDGFVYFRNSELVCGQLGKATLGNGNKDGLFSVLLR 1220
EK Y K E TMCPNDGFVYFRNSEL+ GQLGK TLGNGNK+G+FSVLLR
Sbjct: 611 EKVYIKHKERDKKAITVLEETMCPNDGFVYFRNSELLSGQLGKKTLGNGNKEGMFSVLLR 670
Query: 1219 DYNAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPRGNLNREKKYSIEKGYEACDKLIQ 1040
DYN+HAAASCMNRLAK SAR+IGNHGFSIG+DDVQP +LN++KK I++GYE C+KLI
Sbjct: 671 DYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVQPGQSLNKKKKVIIDEGYEECNKLIA 730
Query: 1039 SYDKGQLKLQPGCDAAQTLEAEITGVLNGIREATAKVCMDELHWRNSPLIMSQCGSKGSP 860
Y KG LK QPGC AQTLE++I+ VLN +RE CM LHWRNSPLIMSQCGSKGSP
Sbjct: 731 LYSKGHLKPQPGCSRAQTLESQISCVLNKLRETAGDDCMSTLHWRNSPLIMSQCGSKGSP 790
Query: 859 INISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRKSKTPAAKGFVANSFYTGLTATEFFF 680
INISQM+ CVGQQSVGG RAPNGFIDR+LPHFP SKTPAAKGFVANSFYTGLTA+EFFF
Sbjct: 791 INISQMVVCVGQQSVGGCRAPNGFIDRTLPHFPINSKTPAAKGFVANSFYTGLTASEFFF 850
Query: 679 HTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDDTVRNSSGGVIQFHYGDDGMDP 500
HTMGGREGLVDTAVKTADTGY+SRRL+K LEDLS+ YD TVRN+SGG++QF YGDDGMDP
Sbjct: 851 HTMGGREGLVDTAVKTADTGYLSRRLMKGLEDLSVFYDQTVRNASGGIVQFVYGDDGMDP 910
Query: 499 AQMEGKNGVPLNLDRLYLKIKATCPSSTHANLSPSEVLEIVNNRLSRHDMTPEGGCSDAF 320
+MEGK G PLNLD+L++K+KATCP H LSP +L++ N+ L + + T G CSD
Sbjct: 911 VKMEGKGGSPLNLDQLFMKVKATCPQRGHDTLSPDVILQMFNDTLFKQE-TSSGRCSDKL 969
Query: 319 KKSLLDFFHKRITTMKNTRRLLQLDEEHVDKNNSVFLEKVAANISGVTSQQLQVFLETCI 140
K+ L F R+ +++TRR L +DE+HV + +S E +AA+ISG++++QLQVFL+TC
Sbjct: 970 KEMLTKFLEDRVKMLRSTRRALHIDEDHVGRRDSSVEECIAADISGISAKQLQVFLDTCF 1029
Query: 139 SRYHLKKXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNITL 2
SRYH K GEPGTQMTLKTFHFAGVASMN+TL
Sbjct: 1030 SRYHSKIIEAGASVGPIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 1075
>emb|CBI16226.3| unnamed protein product [Vitis vinifera]
Length = 1819
Score = 833 bits (2151), Expect = 0.0
Identities = 416/524 (79%), Positives = 460/524 (87%), Gaps = 2/524 (0%)
Frame = -3
Query: 1726 ADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDT 1547
ADFDGDEMN+HVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDT
Sbjct: 496 ADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDT 555
Query: 1546 FYDRAAFSLMCSYMGDAMDHVDLPTPALIKPIELWTGKQLFSVLVRPSANMRVYLNLTVL 1367
FYDRAAFSLMCSYMGD MD VDLPTPA+IK +ELWTGKQLF+VL+RP AN+RVYLNLTV+
Sbjct: 556 FYDRAAFSLMCSYMGDGMDLVDLPTPAIIKAMELWTGKQLFNVLLRPHANVRVYLNLTVM 615
Query: 1366 EKNYSK--SGETMCPNDGFVYFRNSELVCGQLGKATLGNGNKDGLFSVLLRDYNAHAAAS 1193
EK Y+K ETMCP+DGFVYFRNSEL+ GQLGKATLGNGNKDGLFSVLLRDYNAHAAA+
Sbjct: 616 EKTYNKRRGKETMCPSDGFVYFRNSELISGQLGKATLGNGNKDGLFSVLLRDYNAHAAAA 675
Query: 1192 CMNRLAKLSARWIGNHGFSIGIDDVQPRGNLNREKKYSIEKGYEACDKLIQSYDKGQLKL 1013
CMNRLAKLSARWIGNHGFSIGIDDVQP G LN +K IE+GYE C +LIQ Y+KG+LKL
Sbjct: 676 CMNRLAKLSARWIGNHGFSIGIDDVQPGGLLNDQKSKRIEEGYENCHELIQQYNKGKLKL 735
Query: 1012 QPGCDAAQTLEAEITGVLNGIREATAKVCMDELHWRNSPLIMSQCGSKGSPINISQMIAC 833
QPGC+AAQTLEAEITGVLN IRE TA VCM+ELHWRNSPLIMSQCGSKGSPINISQMIAC
Sbjct: 736 QPGCNAAQTLEAEITGVLNKIRETTANVCMEELHWRNSPLIMSQCGSKGSPINISQMIAC 795
Query: 832 VGQQSVGGRRAPNGFIDRSLPHFPRKSKTPAAKGFVANSFYTGLTATEFFFHTMGGREGL 653
VGQQSVGGRRAP+GFIDR+LPHFPRKSKTP AKGFVA+SFYTGLTATEFFFHTMGGREGL
Sbjct: 796 VGQQSVGGRRAPDGFIDRTLPHFPRKSKTPDAKGFVASSFYTGLTATEFFFHTMGGREGL 855
Query: 652 VDTAVKTADTGYMSRRLIKALEDLSIHYDDTVRNSSGGVIQFHYGDDGMDPAQMEGKNGV 473
VDTAVKTADTGYMSRRL+KALEDLSI YD+TVRN++G ++QF YGDDGMDPA+MEGK+G
Sbjct: 856 VDTAVKTADTGYMSRRLMKALEDLSIQYDETVRNANGSIVQFLYGDDGMDPARMEGKDGF 915
Query: 472 PLNLDRLYLKIKATCPSSTHANLSPSEVLEIVNNRLSRHDMTPEGGCSDAFKKSLLDFFH 293
PLN +RL+LK+KATCP+ +A+LS ++ E V RL H+ + E GCSDAFK +L F
Sbjct: 916 PLNFNRLFLKVKATCPAGENASLSALQIEETV-KRLKEHNTSAE-GCSDAFKTNLSGFLE 973
Query: 292 KRITTMKNTRRLLQLDEEHVDKNNSVFLEKVAANISGVTSQQLQ 161
+ KNTR L L EHV + N EK A NISG+TS+QLQ
Sbjct: 974 ECKEKFKNTREALGLHGEHVGEENLDIQEKFAKNISGITSKQLQ 1017
Score = 68.6 bits (166), Expect = 9e-09
Identities = 35/57 (61%), Positives = 40/57 (70%)
Frame = -3
Query: 172 QQLQVFLETCISRYHLKKXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNITL 2
++L VFL+TCISRY LK+ GEPGTQMTLKTFHFAGVASMN+TL
Sbjct: 1450 KRLGVFLDTCISRYQLKRIEAGTAIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 1506