BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia26_contig00028516
         (839 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007044902.1| RNA-binding family protein isoform 1 [Theobr...   195   2e-47
ref|XP_007044909.1| RNA-binding family protein isoform 6 [Theobr...   193   8e-47
ref|XP_007044908.1| RNA-binding family protein isoform 5, partia...   193   8e-47
ref|XP_007044907.1| RNA-binding family protein isoform 4 [Theobr...   193   8e-47
ref|XP_007044904.1| RNA-binding family protein isoform 1 [Theobr...   193   8e-47
ref|XP_006438179.1| hypothetical protein CICLE_v10030915mg [Citr...   191   4e-46
ref|XP_006483997.1| PREDICTED: cleavage and polyadenylation spec...   187   3e-45
ref|XP_006483998.1| PREDICTED: cleavage and polyadenylation spec...   178   2e-42
ref|XP_006438180.1| hypothetical protein CICLE_v10030917mg [Citr...   178   2e-42
ref|XP_007225677.1| hypothetical protein PRUPE_ppa002814mg [Prun...   176   1e-41
ref|XP_004310003.1| PREDICTED: uncharacterized protein LOC101309...   174   5e-41
ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268...   171   2e-40
ref|XP_002515040.1| RNA binding protein, putative [Ricinus commu...   171   4e-40
ref|XP_006341786.1| PREDICTED: cleavage and polyadenylation spec...   169   2e-39
gb|EXB82464.1| Cleavage and polyadenylation specificity factor s...   146   8e-33
emb|CBI16834.3| unnamed protein product [Vitis vinifera]              145   1e-32
ref|XP_002312652.1| RNA recognition motif-containing family prot...   145   1e-32
gb|EYU30596.1| hypothetical protein MIMGU_mgv1a002773mg [Mimulus...   132   2e-28
ref|XP_006378268.1| hypothetical protein POPTR_0010s06150g [Popu...   128   2e-27
ref|XP_002315647.1| RNA recognition motif-containing family prot...   128   2e-27

>ref|XP_007044902.1| RNA-binding family protein isoform 1 [Theobroma cacao]
           gi|590695488|ref|XP_007044903.1| RNA-binding family
           protein isoform 1 [Theobroma cacao]
           gi|508708837|gb|EOY00734.1| RNA-binding family protein
           isoform 1 [Theobroma cacao] gi|508708838|gb|EOY00735.1|
           RNA-binding family protein isoform 1 [Theobroma cacao]
          Length = 653

 Score =  195 bits (496), Expect = 2e-47
 Identities = 110/225 (48%), Positives = 145/225 (64%), Gaps = 24/225 (10%)
 Frame = -3

Query: 606 MDSMAEEQLDYGDEEYG-SQKLQYQGSGAIPALAEEELMGEDDEYDDLYNDVNVGEGFMQ 430
           MD+MAEEQ+D+GDEEYG +QK+QYQGSGAIPALA+EE+MGEDDEYDDLYNDVNVGEGF+Q
Sbjct: 1   MDAMAEEQIDFGDEEYGGAQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60

Query: 429 MQQSE-PVSAGGVANEGVQAQMNDDLGSRIPKHGVSKEVTIPGVEIEKKDSNVGATFPDQ 253
           +Q+SE P   GG+ + G+QAQ N+    R  + G S+ + IPGV ++ K  NV A +P+Q
Sbjct: 61  LQRSEAPPQPGGMGSTGLQAQKNEAPEPR-GEAGGSQGLNIPGVSVQGKHLNVTARYPEQ 119

Query: 252 ITK--------GIGDYPD--EVSQKGSVSAMGSEAQVGNTEFRGPSPMPPKSGVDPN--- 112
             +        G G YP    +SQKG V     + QV N  F+G S    K G+DP+   
Sbjct: 120 DGQPAVSRPEMGSGSYPSGTSISQKGRVMEGTQDTQVKNMGFQGLSSASHKVGIDPSGVP 179

Query: 111 ---------QMSLGPGAPRGVTQMPINQVNLNANRPMMNENVIRP 4
                     ++ G G P+G   +P NQ+ LN N PM++EN +RP
Sbjct: 180 QKIANVPAQSLNSGTGGPQGAPHVPPNQMGLNVNHPMISENQVRP 224


>ref|XP_007044909.1| RNA-binding family protein isoform 6 [Theobroma cacao]
           gi|508708844|gb|EOY00741.1| RNA-binding family protein
           isoform 6 [Theobroma cacao]
          Length = 602

 Score =  193 bits (490), Expect = 8e-47
 Identities = 109/225 (48%), Positives = 147/225 (65%), Gaps = 24/225 (10%)
 Frame = -3

Query: 606 MDSMAEEQLDYGDEEYGS-QKLQYQGSGAIPALAEEELMGEDDEYDDLYNDVNVGEGFMQ 430
           MD+MAEEQ+D+GDEEYG  QK+QYQGSGAIPALA+EE+MGEDDEYDDLYNDVNVGEGF+Q
Sbjct: 1   MDAMAEEQIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60

Query: 429 MQQSE-PVSAGGVANEGVQAQMNDDLGSRIPKHGVSKEVTIPGVEIEKKDSNVGATFPDQ 253
           +Q+SE P+  GG+ + G++AQ N+    R+ + G S+ + IPGV ++ K  NV A +P++
Sbjct: 61  LQRSEAPLQPGGLGSTGLKAQRNEAPEPRV-EAGGSQGLNIPGVSVQGKHPNVSARYPEK 119

Query: 252 ITKGI--------GDYP--DEVSQKGSVSAMGSEAQVGNTEFRG-----------PSPMP 136
             +          G YP    +SQKGSV+    + QV N  F+G           PS +P
Sbjct: 120 EEQPAVNRPEMVSGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGIDPSGVP 179

Query: 135 PKSGVDPNQ-MSLGPGAPRGVTQMPINQVNLNANRPMMNENVIRP 4
            K   DP Q ++ G G P+G   +P NQ+  N N P+MNEN ++P
Sbjct: 180 QKIANDPAQSLNSGTGGPQGPPHVPPNQMGTNVNHPVMNENQVQP 224


>ref|XP_007044908.1| RNA-binding family protein isoform 5, partial [Theobroma cacao]
           gi|508708843|gb|EOY00740.1| RNA-binding family protein
           isoform 5, partial [Theobroma cacao]
          Length = 656

 Score =  193 bits (490), Expect = 8e-47
 Identities = 109/225 (48%), Positives = 147/225 (65%), Gaps = 24/225 (10%)
 Frame = -3

Query: 606 MDSMAEEQLDYGDEEYGS-QKLQYQGSGAIPALAEEELMGEDDEYDDLYNDVNVGEGFMQ 430
           MD+MAEEQ+D+GDEEYG  QK+QYQGSGAIPALA+EE+MGEDDEYDDLYNDVNVGEGF+Q
Sbjct: 1   MDAMAEEQIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60

Query: 429 MQQSE-PVSAGGVANEGVQAQMNDDLGSRIPKHGVSKEVTIPGVEIEKKDSNVGATFPDQ 253
           +Q+SE P+  GG+ + G++AQ N+    R+ + G S+ + IPGV ++ K  NV A +P++
Sbjct: 61  LQRSEAPLQPGGLGSTGLKAQRNEAPEPRV-EAGGSQGLNIPGVSVQGKHPNVSARYPEK 119

Query: 252 ITKGI--------GDYP--DEVSQKGSVSAMGSEAQVGNTEFRG-----------PSPMP 136
             +          G YP    +SQKGSV+    + QV N  F+G           PS +P
Sbjct: 120 EEQPAVNRPEMVSGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGIDPSGVP 179

Query: 135 PKSGVDPNQ-MSLGPGAPRGVTQMPINQVNLNANRPMMNENVIRP 4
            K   DP Q ++ G G P+G   +P NQ+  N N P+MNEN ++P
Sbjct: 180 QKIANDPAQSLNSGTGGPQGPPHVPPNQMGTNVNHPVMNENQVQP 224


>ref|XP_007044907.1| RNA-binding family protein isoform 4 [Theobroma cacao]
           gi|508708842|gb|EOY00739.1| RNA-binding family protein
           isoform 4 [Theobroma cacao]
          Length = 697

 Score =  193 bits (490), Expect = 8e-47
 Identities = 109/225 (48%), Positives = 147/225 (65%), Gaps = 24/225 (10%)
 Frame = -3

Query: 606 MDSMAEEQLDYGDEEYGS-QKLQYQGSGAIPALAEEELMGEDDEYDDLYNDVNVGEGFMQ 430
           MD+MAEEQ+D+GDEEYG  QK+QYQGSGAIPALA+EE+MGEDDEYDDLYNDVNVGEGF+Q
Sbjct: 1   MDAMAEEQIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60

Query: 429 MQQSE-PVSAGGVANEGVQAQMNDDLGSRIPKHGVSKEVTIPGVEIEKKDSNVGATFPDQ 253
           +Q+SE P+  GG+ + G++AQ N+    R+ + G S+ + IPGV ++ K  NV A +P++
Sbjct: 61  LQRSEAPLQPGGLGSTGLKAQRNEAPEPRV-EAGGSQGLNIPGVSVQGKHPNVSARYPEK 119

Query: 252 ITKGI--------GDYP--DEVSQKGSVSAMGSEAQVGNTEFRG-----------PSPMP 136
             +          G YP    +SQKGSV+    + QV N  F+G           PS +P
Sbjct: 120 EEQPAVNRPEMVSGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGIDPSGVP 179

Query: 135 PKSGVDPNQ-MSLGPGAPRGVTQMPINQVNLNANRPMMNENVIRP 4
            K   DP Q ++ G G P+G   +P NQ+  N N P+MNEN ++P
Sbjct: 180 QKIANDPAQSLNSGTGGPQGPPHVPPNQMGTNVNHPVMNENQVQP 224


>ref|XP_007044904.1| RNA-binding family protein isoform 1 [Theobroma cacao]
           gi|590695496|ref|XP_007044905.1| RNA-binding family
           protein isoform 1 [Theobroma cacao]
           gi|590695500|ref|XP_007044906.1| RNA-binding family
           protein isoform 1 [Theobroma cacao]
           gi|508708839|gb|EOY00736.1| RNA-binding family protein
           isoform 1 [Theobroma cacao] gi|508708840|gb|EOY00737.1|
           RNA-binding family protein isoform 1 [Theobroma cacao]
           gi|508708841|gb|EOY00738.1| RNA-binding family protein
           isoform 1 [Theobroma cacao]
          Length = 652

 Score =  193 bits (490), Expect = 8e-47
 Identities = 109/225 (48%), Positives = 147/225 (65%), Gaps = 24/225 (10%)
 Frame = -3

Query: 606 MDSMAEEQLDYGDEEYGS-QKLQYQGSGAIPALAEEELMGEDDEYDDLYNDVNVGEGFMQ 430
           MD+MAEEQ+D+GDEEYG  QK+QYQGSGAIPALA+EE+MGEDDEYDDLYNDVNVGEGF+Q
Sbjct: 1   MDAMAEEQIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60

Query: 429 MQQSE-PVSAGGVANEGVQAQMNDDLGSRIPKHGVSKEVTIPGVEIEKKDSNVGATFPDQ 253
           +Q+SE P+  GG+ + G++AQ N+    R+ + G S+ + IPGV ++ K  NV A +P++
Sbjct: 61  LQRSEAPLQPGGLGSTGLKAQRNEAPEPRV-EAGGSQGLNIPGVSVQGKHPNVSARYPEK 119

Query: 252 ITKGI--------GDYP--DEVSQKGSVSAMGSEAQVGNTEFRG-----------PSPMP 136
             +          G YP    +SQKGSV+    + QV N  F+G           PS +P
Sbjct: 120 EEQPAVNRPEMVSGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGIDPSGVP 179

Query: 135 PKSGVDPNQ-MSLGPGAPRGVTQMPINQVNLNANRPMMNENVIRP 4
            K   DP Q ++ G G P+G   +P NQ+  N N P+MNEN ++P
Sbjct: 180 QKIANDPAQSLNSGTGGPQGPPHVPPNQMGTNVNHPVMNENQVQP 224


>ref|XP_006438179.1| hypothetical protein CICLE_v10030915mg [Citrus clementina]
           gi|557540375|gb|ESR51419.1| hypothetical protein
           CICLE_v10030915mg [Citrus clementina]
          Length = 658

 Score =  191 bits (484), Expect = 4e-46
 Identities = 116/228 (50%), Positives = 144/228 (63%), Gaps = 27/228 (11%)
 Frame = -3

Query: 606 MDSMAEEQLDYGDEEYG-SQKLQYQGSGAIPALAEEELMGEDDEYDDLYNDVNVGEGFMQ 430
           MDSMAEEQ+DY +EEYG +QK+QYQG GAIPALA+EELMGEDDEYDDLYNDVNVG+G +Q
Sbjct: 1   MDSMAEEQIDYEEEEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQ 60

Query: 429 MQQSE-PVSAGGVANEGVQAQMNDDLGSRIPKHGVSKEVTIPGVEIEKKDSNVGATFPDQ 253
            QQ E P  + GV N  +Q +  D    ++ + GVS+   +PGV +E K +N G  FP Q
Sbjct: 61  FQQPEAPPPSAGVGNGRLQVKKTDVPEQQV-QAGVSQGSNVPGVSVEGKYTNAGTHFPAQ 119

Query: 252 ---------ITKGIGDYPD--EVSQKGSVSAMGSEAQVGNTEFRGPSPMPPKSGVDPNQM 106
                       G G+YPD   VSQKGSV     +A V N  F+G +  PP++GVDP+ M
Sbjct: 120 NDVQVAVNRPNMGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPPRTGVDPSNM 179

Query: 105 S----------LGPGA--PRGVTQMPINQ--VNLNANRPMMNENVIRP 4
                      L PGA  P+G   +P NQ  VN+N NR M+NEN IRP
Sbjct: 180 PGRVANEPAPVLNPGAAGPQGAL-IPANQMGVNINVNRAMVNENQIRP 226


>ref|XP_006483997.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           CG7185-like isoform X1 [Citrus sinensis]
          Length = 658

 Score =  187 bits (476), Expect = 3e-45
 Identities = 115/228 (50%), Positives = 143/228 (62%), Gaps = 27/228 (11%)
 Frame = -3

Query: 606 MDSMAEEQLDYGDEEYG-SQKLQYQGSGAIPALAEEELMGEDDEYDDLYNDVNVGEGFMQ 430
           MDSMAEEQ+DY +EEYG +QK+QYQG GAIPALA+EELMGEDDEYDDLYNDVNVG+G +Q
Sbjct: 1   MDSMAEEQIDYEEEEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQ 60

Query: 429 MQQSE-PVSAGGVANEGVQAQMNDDLGSRIPKHGVSKEVTIPGVEIEKKDSNVGATFPDQ 253
            QQ E P  + GV N  +Q +  D    ++ + GVS+   +PGV +E K +N G  FP Q
Sbjct: 61  FQQPEAPPPSAGVGNGRLQVKKTDVPEQQV-QAGVSQGSNVPGVSVEGKYTNAGTHFPAQ 119

Query: 252 ---------ITKGIGDYPD--EVSQKGSVSAMGSEAQVGNTEFRGPSPMPPKSGVDPNQM 106
                       G G+YPD   VSQKGSV     +A V N  F+G +  P ++GVDP+ M
Sbjct: 120 NDVQVAVNRPNMGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPSRTGVDPSNM 179

Query: 105 S----------LGPGA--PRGVTQMPINQ--VNLNANRPMMNENVIRP 4
                      L PGA  P+G   +P NQ  VN+N NR M+NEN IRP
Sbjct: 180 PGRVANEPAPVLNPGAAGPQGAL-IPANQMGVNINVNRAMVNENQIRP 226


>ref|XP_006483998.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           CG7185-like isoform X1 [Citrus sinensis]
          Length = 655

 Score =  178 bits (452), Expect = 2e-42
 Identities = 112/225 (49%), Positives = 139/225 (61%), Gaps = 27/225 (12%)
 Frame = -3

Query: 597 MAEEQLDYGDEEYG-SQKLQYQGSGAIPALAEEELMGEDDEYDDLYNDVNVGEGFMQMQQ 421
           MAEEQ+DY ++EYG +QK+QYQG GAIPALA+EELMGEDDEYDDLYNDVNVG+G +Q QQ
Sbjct: 1   MAEEQIDYEEDEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQFQQ 60

Query: 420 SE-PVSAGGVANEGVQAQMNDDLGSRIPKHGVSKEVTIPGVEIEKKDSNVGATFPDQ--- 253
            E P  + GV N  +Q +  D    R+ + G S+   IPGV +E K +N G+ FP Q   
Sbjct: 61  PEAPPPSAGVGNGRLQVKKTDVPEQRV-QVGGSQGSNIPGVSVEGKYTNAGSHFPAQNDV 119

Query: 252 ------ITKGIGDYPD--EVSQKGSVSAMGSEAQVGNTEFRGPSPMPPKSGVDPNQMS-- 103
                    G G+YPD   VSQKGSV     +A V N  F+G +  P ++GVDP+ M   
Sbjct: 120 QVAVNRPNMGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPSRTGVDPSNMPGR 179

Query: 102 --------LGPGA--PRGVTQMPINQ--VNLNANRPMMNENVIRP 4
                   L PGA  P+G   +P NQ  VN N NR M+NEN IRP
Sbjct: 180 VANEPAPVLNPGAAGPQGAL-IPANQMGVNANVNRVMVNENQIRP 223


>ref|XP_006438180.1| hypothetical protein CICLE_v10030917mg [Citrus clementina]
           gi|567891321|ref|XP_006438181.1| hypothetical protein
           CICLE_v10030917mg [Citrus clementina]
           gi|557540376|gb|ESR51420.1| hypothetical protein
           CICLE_v10030917mg [Citrus clementina]
           gi|557540377|gb|ESR51421.1| hypothetical protein
           CICLE_v10030917mg [Citrus clementina]
          Length = 655

 Score =  178 bits (452), Expect = 2e-42
 Identities = 111/225 (49%), Positives = 139/225 (61%), Gaps = 27/225 (12%)
 Frame = -3

Query: 597 MAEEQLDYGDEEYG-SQKLQYQGSGAIPALAEEELMGEDDEYDDLYNDVNVGEGFMQMQQ 421
           MAEEQ+DY ++EYG +QK+QYQG GAIPALA+EELMGEDDEYDDLYND+NVG+G +Q QQ
Sbjct: 1   MAEEQIDYEEDEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDINVGDGLLQFQQ 60

Query: 420 SE-PVSAGGVANEGVQAQMNDDLGSRIPKHGVSKEVTIPGVEIEKKDSNVGATFPDQ--- 253
            E P  + GV N  +Q +  D    R+ + G S+   IPGV +E K +N G+ FP Q   
Sbjct: 61  PEAPPPSAGVGNGRLQVKKTDVPEQRV-QVGGSQGSNIPGVSVEGKYTNAGSDFPAQNDV 119

Query: 252 ------ITKGIGDYPD--EVSQKGSVSAMGSEAQVGNTEFRGPSPMPPKSGVDPNQMS-- 103
                    G G+YPD   VSQKGSV     +A V N  F+G +  P ++GVDP+ M   
Sbjct: 120 QVAVNRPNMGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPSRTGVDPSNMPGR 179

Query: 102 --------LGPGA--PRGVTQMPINQ--VNLNANRPMMNENVIRP 4
                   L PGA  P+G   +P NQ  VN N NR M+NEN IRP
Sbjct: 180 AANEPAPVLNPGAAGPQGAL-IPANQMGVNANVNRVMVNENQIRP 223


>ref|XP_007225677.1| hypothetical protein PRUPE_ppa002814mg [Prunus persica]
           gi|462422613|gb|EMJ26876.1| hypothetical protein
           PRUPE_ppa002814mg [Prunus persica]
          Length = 630

 Score =  176 bits (446), Expect = 1e-41
 Identities = 109/214 (50%), Positives = 135/214 (63%), Gaps = 16/214 (7%)
 Frame = -3

Query: 597 MAEEQLDYGDEEYG-SQKLQYQGSGAIPALAEEELMGEDDEYDDLYNDVNVGEGFMQMQQ 421
           MAEEQ+DY DEEYG +QKLQYQGSGAI ALA+EE M EDDEYDDLYNDVNV EGF+QM +
Sbjct: 1   MAEEQIDYEDEEYGGAQKLQYQGSGAISALADEEPMVEDDEYDDLYNDVNVREGFLQMHR 60

Query: 420 SE-PVSAGGVANEGVQAQMNDDLGSRIPKHGVSKEVTIPGVEIEKKDSNVGATFPDQITK 244
           SE P+  GGV N G+QAQ  D   +R+ + GVS+E  IPGV ++ K S+  A FP+Q   
Sbjct: 61  SEAPLPPGGVGNGGLQAQKTDVTETRV-QAGVSQESKIPGVSVQGKYSSAVAQFPEQ--- 116

Query: 243 GIGDYPDEVSQKGSVSAMGSEAQVGNTEFRGPSPMPPKSGVDPN------------QMSL 100
             G  P           +  E ++G+T + G + MPP  G D +             M+ 
Sbjct: 117 -QGQPP-----------VAKEPELGSTGY-GSTTMPPNVGGDSSDITGKTALESVPSMNS 163

Query: 99  GPGAPRGVTQMPINQVNL--NANRPMMNENVIRP 4
           G   P GVTQMP NQ+++  NANRPM NEN IRP
Sbjct: 164 GTAGPTGVTQMPTNQISIKVNANRPMFNENQIRP 197


>ref|XP_004310003.1| PREDICTED: uncharacterized protein LOC101309507 [Fragaria vesca
           subsp. vesca]
          Length = 646

 Score =  174 bits (440), Expect = 5e-41
 Identities = 108/218 (49%), Positives = 134/218 (61%), Gaps = 17/218 (7%)
 Frame = -3

Query: 606 MDSMAEEQLDYGDEEYG-SQKLQYQGSGAIPALAEEELMGEDDEYDDLYNDVNVGEGFMQ 430
           MD M EEQ+DY +EEYG +QKLQYQ SGAIPALA+EE M EDDEYDDLYNDVNVGEGF+Q
Sbjct: 1   MDPMGEEQIDYEEEEYGGAQKLQYQESGAIPALADEEPMVEDDEYDDLYNDVNVGEGFLQ 60

Query: 429 MQQSE-PVSAGGVANEGVQAQMNDDLGSRIPKHGVSKEVTIPGVEIEKKDSNVGATFPDQ 253
           M + E P+   GV N G+QAQ N+    R+ + G S+EV  PG  +E K S+V    P+Q
Sbjct: 61  MHRPEPPLPPAGVGNGGLQAQKNNVPEQRV-QGGASQEVKNPGFSVEGKYSSV----PEQ 115

Query: 252 ITK-GIGDYPDEVSQKGSVSAMGSEAQVGNTEFRGPSPMPPKSGVDPN------------ 112
             +  +   P+  SQKG V  M  +AQV N  F+G + M      D +            
Sbjct: 116 KDQPPVSVVPEMASQKGRVMEMTHDAQVRNMGFQGAATMQSNVVADSSDLTGKIANGPIP 175

Query: 111 QMSLGPGAPRGVTQMPINQVN--LNANRPMMNENVIRP 4
            M+ G   P  V QMP NQ+N  +N NRPM+NEN IRP
Sbjct: 176 SMNSGSNGPPAVQQMPANQMNMKINVNRPMVNENQIRP 213


>ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268141 isoform 1 [Vitis
           vinifera] gi|359473133|ref|XP_003631251.1| PREDICTED:
           uncharacterized protein LOC100268141 isoform 2 [Vitis
           vinifera]
          Length = 647

 Score =  171 bits (434), Expect = 2e-40
 Identities = 104/223 (46%), Positives = 133/223 (59%), Gaps = 25/223 (11%)
 Frame = -3

Query: 597 MAEEQLDYGDEEYG-SQKLQYQGSGAIPALAEEELMGEDDEYDDLYNDVNVGEGFMQMQQ 421
           MAEEQLDY DEEYG +QK+ +QG GAI ALA++ELMGEDDEYDDLYNDVNVGEGF+QM +
Sbjct: 1   MAEEQLDYEDEEYGGAQKMPFQGGGAISALADDELMGEDDEYDDLYNDVNVGEGFLQMHR 60

Query: 420 SEPVSAGGVANEGVQAQMNDDLGSRIPKHGVSKEVTIPGVEI----------EKKDSNVG 271
           SE  +  GV   G       D+  +  + G S+ + IPGV I          EKK+  + 
Sbjct: 61  SEAPAPSGVMAGGPFQAHKTDVPPQKLEAGTSQGLIIPGVSIEGKYSNPHFHEKKEGPMA 120

Query: 270 ATFPDQITKGIGDYPDEVSQKGSVSAMGSEAQVGNTEFRGPSPMPPKSGVDPNQ------ 109
              P+  +    D P  VSQKG V  M  + QV N  F+G +P+P K+G +P+       
Sbjct: 121 VKGPEMGSTSHLDGP-SVSQKGRVLEMTHDTQVRNLGFQGSTPIPQKTGAEPSDVHGKIA 179

Query: 108 ------MSLGPGAPRGVTQMPINQ--VNLNANRPMMNENVIRP 4
                 ++ G G PR V QM  NQ  +N+N NRPM+NEN IRP
Sbjct: 180 NESTPVLNSGTGGPRAVPQMLSNQMGMNVNVNRPMVNENQIRP 222


>ref|XP_002515040.1| RNA binding protein, putative [Ricinus communis]
           gi|223546091|gb|EEF47594.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 644

 Score =  171 bits (432), Expect = 4e-40
 Identities = 111/218 (50%), Positives = 141/218 (64%), Gaps = 20/218 (9%)
 Frame = -3

Query: 597 MAEEQLDYGDEEYG-SQKLQYQGSGAIPALAEEELMGEDDEYDDLYNDVNVGEGFMQMQQ 421
           MA+EQ+DY DEEYG +QKLQYQGSGAIPALAEEE MGEDDEYDDLYNDVN+GE F+QM +
Sbjct: 1   MADEQIDYEDEEYGGAQKLQYQGSGAIPALAEEE-MGEDDEYDDLYNDVNIGENFLQMHR 59

Query: 420 SE-PVSAGGVANEGVQAQMNDDLGSRIPKHGVSKEVTIPGVEIEKKDSNVGATFPDQITK 244
           SE P +   V N G Q + ++DL  R+ + G S+ + IPGV +E K S  G  FP+Q  K
Sbjct: 60  SEAPPAPPSVGNGGFQPRNSNDL--RV-ESGGSQGLNIPGVAVESKYS-TGTHFPEQNVK 115

Query: 243 G--IGD--YPD--EVSQKGSVSAMGSEAQVGNTEFRGPSPMPPKSGVDP----NQMSLGP 94
           G  IG   YPD   ++QK  V  M +++Q  N  F+G +  P   GVDP    N++S  P
Sbjct: 116 GPEIGSVGYPDGSSIAQKTRVMEMTNDSQARNMGFQGSTSGPSNIGVDPSDMNNKISNDP 175

Query: 93  ------GAPRGVTQMPINQVNLN--ANRPMMNENVIRP 4
                 G PR + Q+P +Q+N+N   NR   NEN IRP
Sbjct: 176 TPVPNAGVPRVIPQLPASQMNMNMDTNRSATNENQIRP 213


>ref|XP_006341786.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           CG7185-like isoform X1 [Solanum tuberosum]
           gi|565349616|ref|XP_006341787.1| PREDICTED: cleavage and
           polyadenylation specificity factor subunit CG7185-like
           isoform X2 [Solanum tuberosum]
          Length = 648

 Score =  169 bits (427), Expect = 2e-39
 Identities = 105/226 (46%), Positives = 133/226 (58%), Gaps = 25/226 (11%)
 Frame = -3

Query: 606 MDSMAEEQLDYGDEEYG-SQKLQYQGSGAIPALAEEELMGEDDEYDDLYNDVNVGEGFMQ 430
           MD  A+EQLDYGDEEYG S K+QY GSG IPALAE+E+MGEDDEYDDLYNDVN+GEGF+Q
Sbjct: 1   MDPTADEQLDYGDEEYGGSHKMQYHGSGTIPALAEDEMMGEDDEYDDLYNDVNIGEGFLQ 60

Query: 429 MQQSE-PVSAGGVANEGVQAQMNDDLGSRIPKHGVSKEVTIPGVEIEKKDSNVGATFPDQ 253
           +Q+SE PV +    N   QAQ +    SR    G S+E  IPG+  E K +     FP Q
Sbjct: 61  LQRSEVPVPSVDAGNGNFQAQKDSFPASRAGGLG-SEEAKIPGIATEGKYAGTEVQFPQQ 119

Query: 252 ----ITKGIGDYPDEVSQKGSVSA--MGSEAQVGNTEFRGPSPMPPKSGVDPNQM----- 106
               + +   + P + +QK   SA  M   +Q GN+ ++G  PMP K G DP  M     
Sbjct: 120 KGEPVVERETERPADAAQKARPSAITMTLNSQAGNSGYQGSMPMPQKIGADPMAMPEKNA 179

Query: 105 --------SLGPGAPRGVTQMPINQV----NLNANRPMMNENVIRP 4
                   S+ PG PR V  MP NQ+    N+N N P+++E   RP
Sbjct: 180 SEATPLMNSVVPG-PRVVPHMPTNQLNSSGNVNMNNPVISETPFRP 224


>gb|EXB82464.1| Cleavage and polyadenylation specificity factor subunit [Morus
           notabilis]
          Length = 636

 Score =  146 bits (369), Expect = 8e-33
 Identities = 104/221 (47%), Positives = 132/221 (59%), Gaps = 23/221 (10%)
 Frame = -3

Query: 597 MAEEQLDYGDEEYG-SQKLQYQGSG-AIPALAEEELMGEDDEYDDLYNDVNVGEGFMQMQ 424
           MAE+ +D+ DEEYG +QK QYQGSG AI ALA+EELMG+DDEYDDLYNDVNVGEGF+Q+Q
Sbjct: 1   MAEDHIDFEDEEYGGAQKHQYQGSGGAISALADEELMGDDDEYDDLYNDVNVGEGFLQLQ 60

Query: 423 QSEPVS---AGGVANEGVQAQMNDDLGSRIPKHGVSKEVTIPGVEIEKKDSNVGATFPDQ 253
           +SE  S   A GV N G+QAQ  +    R  + G S++  IPGV  E + S+ G+ FP Q
Sbjct: 61  RSEAPSLPAAAGVGN-GLQAQKRNFPEPR-EEIGGSQQPNIPGVSAEGRFSSAGSQFPGQ 118

Query: 252 ITKGIGDYPDEVSQKGSV----SAMGSEAQVGNTEFRGPSPMPPKSGVD----PNQM--- 106
                G   D+ S+ GS+     A GS+       F+G  PM    GVD    P +M   
Sbjct: 119 QD---GLKVDKKSEAGSMVYPDGASGSQKGRIVAGFQGSKPMLHSVGVDSSDIPGKMVNE 175

Query: 105 -----SLGPGAPRGVTQMPINQVNLNAN--RPMMNENVIRP 4
                + G   PRG+  M  NQ  +NAN   P++NEN IRP
Sbjct: 176 PIQAPNSGGAGPRGILPMQGNQTTVNANVSHPIVNENQIRP 216


>emb|CBI16834.3| unnamed protein product [Vitis vinifera]
          Length = 491

 Score =  145 bits (367), Expect = 1e-32
 Identities = 89/205 (43%), Positives = 117/205 (57%), Gaps = 24/205 (11%)
 Frame = -3

Query: 546 LQYQGSGAIPALAEEELMGEDDEYDDLYNDVNVGEGFMQMQQSEPVSAGGVANEGVQAQM 367
           + +QG GAI ALA++ELMGEDDEYDDLYNDVNVGEGF+QM +SE  +  GV   G     
Sbjct: 1   MPFQGGGAISALADDELMGEDDEYDDLYNDVNVGEGFLQMHRSEAPAPSGVMAGGPFQAH 60

Query: 366 NDDLGSRIPKHGVSKEVTIPGVEI----------EKKDSNVGATFPDQITKGIGDYPDEV 217
             D+  +  + G S+ + IPGV I          EKK+  +    P+  +    D P  V
Sbjct: 61  KTDVPPQKLEAGTSQGLIIPGVSIEGKYSNPHFHEKKEGPMAVKGPEMGSTSHLDGP-SV 119

Query: 216 SQKGSVSAMGSEAQVGNTEFRGPSPMPPKSGVDPNQ------------MSLGPGAPRGVT 73
           SQKG V  M  + QV N  F+G +P+P K+G +P+             ++ G G PR V 
Sbjct: 120 SQKGRVLEMTHDTQVRNLGFQGSTPIPQKTGAEPSDVHGKIANESTPVLNSGTGGPRAVP 179

Query: 72  QMPINQ--VNLNANRPMMNENVIRP 4
           QM  NQ  +N+N NRPM+NEN IRP
Sbjct: 180 QMLSNQMGMNVNVNRPMVNENQIRP 204


>ref|XP_002312652.1| RNA recognition motif-containing family protein [Populus
           trichocarpa] gi|222852472|gb|EEE90019.1| RNA recognition
           motif-containing family protein [Populus trichocarpa]
          Length = 619

 Score =  145 bits (367), Expect = 1e-32
 Identities = 97/217 (44%), Positives = 123/217 (56%), Gaps = 24/217 (11%)
 Frame = -3

Query: 582 LDYGDEEYGSQKLQYQGSGAIPALAEEELMGEDDEYDDLYNDVNVGEGFMQMQQSE-PVS 406
           +DY +EE    K+QYQGSGAIPALAEEE MGEDDEYDDLYNDVNVGE F+QM  SE P  
Sbjct: 1   MDYEEEE----KMQYQGSGAIPALAEEE-MGEDDEYDDLYNDVNVGENFLQMHGSEAPAP 55

Query: 405 AGGVANEGVQAQMNDDLGSRIPKHG-VSKEVTIPGVEIEKKDSNVGATFPDQITKGIGDY 229
              V N G Q +   +  SRI   G  +  +T  G  +E   SN  A FP+Q    +   
Sbjct: 56  PATVGNGGFQTRNAHE--SRIETGGSQALAITGGGPAVEGIYSNAKAHFPEQKQVAVAVE 113

Query: 228 PDE--------VSQKGSVSAMGSEAQVGNTEFRGPSPMPPKSGVDPNQMS---------- 103
             +        V+QKG V  M  + QV N  F+  +P+PP  GVDP+ MS          
Sbjct: 114 AQDVGPVDGSSVAQKGRVIEMSHDVQVRNMGFQKSTPVPPGIGVDPSDMSRKNAIEPEPL 173

Query: 102 --LGPGAPRGVTQMPINQVNLNA--NRPMMNENVIRP 4
              G   PRG  QM +NQ++++A  NRP++NEN +RP
Sbjct: 174 PITGSAGPRGAPQMQVNQMHMSADVNRPVVNENQVRP 210


>gb|EYU30596.1| hypothetical protein MIMGU_mgv1a002773mg [Mimulus guttatus]
          Length = 639

 Score =  132 bits (332), Expect = 2e-28
 Identities = 89/224 (39%), Positives = 117/224 (52%), Gaps = 23/224 (10%)
 Frame = -3

Query: 606 MDSMAEEQLDYGDEEYG-SQKLQYQGSGAIPALAEEELMGEDDEYDDLYNDVNVGEGFMQ 430
           MD + +EQLDYGDEEYG +QK+QY   GAIPALAE+E++G+DDEYDDLYNDVNVGEGFMQ
Sbjct: 1   MDPVTDEQLDYGDEEYGGNQKMQYHHGGAIPALAEDEMIGDDDEYDDLYNDVNVGEGFMQ 60

Query: 429 MQQSEPVSAGGVANEGVQAQMNDDLGSRIPKHGVSKEVTIPGVEIEKKDSNVGATFPDQ- 253
           MQ+SE      V N       N   G+R  +   S+EV    V  E   +  G    DQ 
Sbjct: 61  MQRSEAPPPSAVGNNSFSISKNTAPGTR-AEAIASQEVNNGRVGNEGSYAPNGVQLSDQK 119

Query: 252 ---ITKGIGDYPDEVSQKGSVSAMGSEAQVGNTEFRGPSPMPPKSGVDPNQMS------- 103
                 G    P + SQ+  +  + + +Q  +  ++G   M  K+  D    S       
Sbjct: 120 NNLTAVGGPAQPVDASQRVRLPEVANSSQAAHLGYQGSEIMLHKTATDRMNNSENIVGEP 179

Query: 102 -----LGPGAPRGVTQMPIN------QVNLNANRPMMNENVIRP 4
                   G+ +GV Q P N       VN+N NR M +E +IRP
Sbjct: 180 ASLVYPNTGSSKGVPQAPSNLMNSNANVNVNVNRSMDDEYLIRP 223


>ref|XP_006378268.1| hypothetical protein POPTR_0010s06150g [Populus trichocarpa]
           gi|550329195|gb|ERP56065.1| hypothetical protein
           POPTR_0010s06150g [Populus trichocarpa]
          Length = 591

 Score =  128 bits (322), Expect = 2e-27
 Identities = 88/197 (44%), Positives = 107/197 (54%), Gaps = 4/197 (2%)
 Frame = -3

Query: 582 LDYGDEEYGSQKLQYQGSGAIPALAEEELMGEDDEYDDLYNDVNVGEGFMQMQQSE-PVS 406
           +D+ +EE    K+QYQGSGAIPALAEEEL GEDDEYDDLYNDVNVGE F+QM  SE P  
Sbjct: 1   MDFEEEE----KMQYQGSGAIPALAEEEL-GEDDEYDDLYNDVNVGENFLQMHGSEAPAP 55

Query: 405 AGGVANEGVQAQMNDDLGSRIPKHGVSKEVTI-PGVEIEKKDSNVGATFPDQITKGIGDY 229
                N G Q +   +  SR+   G     T   GV +E K SN GA FP+Q   GIG  
Sbjct: 56  PATAGNGGFQTRNAHE--SRVETGGSQVLATSGAGVAVEGKYSNAGAHFPEQKQAGIGVE 113

Query: 228 PDEVSQKGSVSAMGSEAQVGNTEFRGPSPMPPKSGVDPNQMSLGPGAPRGVTQMPINQVN 49
            ++V   G     G  + V                        G   PRGV QM +NQ+N
Sbjct: 114 ANDVGSIG----YGDGSSVAQK---------------------GSAGPRGVPQMQVNQMN 148

Query: 48  LNA--NRPMMNENVIRP 4
           +NA  NRP++NEN +RP
Sbjct: 149 MNADVNRPVVNENQVRP 165


>ref|XP_002315647.1| RNA recognition motif-containing family protein [Populus
           trichocarpa] gi|222864687|gb|EEF01818.1| RNA recognition
           motif-containing family protein [Populus trichocarpa]
          Length = 573

 Score =  128 bits (322), Expect = 2e-27
 Identities = 88/197 (44%), Positives = 107/197 (54%), Gaps = 4/197 (2%)
 Frame = -3

Query: 582 LDYGDEEYGSQKLQYQGSGAIPALAEEELMGEDDEYDDLYNDVNVGEGFMQMQQSE-PVS 406
           +D+ +EE    K+QYQGSGAIPALAEEEL GEDDEYDDLYNDVNVGE F+QM  SE P  
Sbjct: 1   MDFEEEE----KMQYQGSGAIPALAEEEL-GEDDEYDDLYNDVNVGENFLQMHGSEAPAP 55

Query: 405 AGGVANEGVQAQMNDDLGSRIPKHGVSKEVTI-PGVEIEKKDSNVGATFPDQITKGIGDY 229
                N G Q +   +  SR+   G     T   GV +E K SN GA FP+Q   GIG  
Sbjct: 56  PATAGNGGFQTRNAHE--SRVETGGSQVLATSGAGVAVEGKYSNAGAHFPEQKQAGIGVE 113

Query: 228 PDEVSQKGSVSAMGSEAQVGNTEFRGPSPMPPKSGVDPNQMSLGPGAPRGVTQMPINQVN 49
            ++V   G     G  + V                        G   PRGV QM +NQ+N
Sbjct: 114 ANDVGSIG----YGDGSSVAQK---------------------GSAGPRGVPQMQVNQMN 148

Query: 48  LNA--NRPMMNENVIRP 4
           +NA  NRP++NEN +RP
Sbjct: 149 MNADVNRPVVNENQVRP 165