BLASTX nr result

ID: Akebia26_contig00027961 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia26_contig00027961
         (318 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT38756.2| Putative methyltransferase family protein [Solanu...    59   7e-07
gb|ABB00038.1| reverse transcriptase family member [Glycine max]       59   9e-07
gb|AAT40504.2| Polyprotein, putative [Solanum demissum]                58   1e-06
gb|AAT40500.1| Putative reverse transcriptase, identical [Solanu...    58   1e-06
ref|XP_006361364.1| PREDICTED: uncharacterized protein LOC102596...    57   3e-06
emb|CCH50976.1| T4.15 [Malus x robusta]                                56   4e-06

>gb|AAT38756.2| Putative methyltransferase family protein [Solanum demissum]
          Length = 828

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 27/53 (50%), Positives = 34/53 (64%)
 Frame = -1

Query: 318 LRWMCAKTKKEKIRNECILENVGAVLISDKPRKI*TRWFTHVQQRQIPALVKR 160
           LRWMC  T+ +KIRNE I E VG   + DK R+   RWF HV++R   A V+R
Sbjct: 4   LRWMCGHTRSDKIRNEVIREKVGVASVVDKLREARLRWFGHVKRRSADAAVRR 56


>gb|ABB00038.1| reverse transcriptase family member [Glycine max]
          Length = 377

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 26/57 (45%), Positives = 40/57 (70%)
 Frame = -1

Query: 318 LRWMCAKTKKEKIRNECILENVGAVLISDKPRKI*TRWFTHVQQRQIPALVKRNNQV 148
           LRWMC KT+++KIRNE I E VG   I +K  +   RWF HV++R + ++++R +Q+
Sbjct: 271 LRWMCGKTRQDKIRNEAIRERVGVAPIVEKMVENRLRWFGHVERRPVDSVLRRVDQM 327


>gb|AAT40504.2| Polyprotein, putative [Solanum demissum]
          Length = 868

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 27/53 (50%), Positives = 34/53 (64%)
 Frame = -1

Query: 318 LRWMCAKTKKEKIRNECILENVGAVLISDKPRKI*TRWFTHVQQRQIPALVKR 160
           LRWMC  T+ +KIRNE I E VG   + DK R+   RWF HV++R   A V+R
Sbjct: 587 LRWMCGHTRSDKIRNEVIREKVGVASVVDKLREARLRWFGHVKRRSADAPVRR 639


>gb|AAT40500.1| Putative reverse transcriptase, identical [Solanum demissum]
          Length = 213

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 27/53 (50%), Positives = 34/53 (64%)
 Frame = -1

Query: 318 LRWMCAKTKKEKIRNECILENVGAVLISDKPRKI*TRWFTHVQQRQIPALVKR 160
           LRWMC  T+ +KIRNE I E VG   + DK R+   RWF HV++R   A V+R
Sbjct: 119 LRWMCGHTRSDKIRNEVIREKVGVASVVDKLREARLRWFGHVKRRSADAPVRR 171


>ref|XP_006361364.1| PREDICTED: uncharacterized protein LOC102596609 [Solanum tuberosum]
          Length = 278

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 27/53 (50%), Positives = 34/53 (64%)
 Frame = -1

Query: 318 LRWMCAKTKKEKIRNECILENVGAVLISDKPRKI*TRWFTHVQQRQIPALVKR 160
           LRWMC  T+ +KIRNE I E VG   + DK R+   RWF HV++R   A V+R
Sbjct: 174 LRWMCGHTRSDKIRNEVIREKVGVASVVDKLREARLRWFGHVRRRCADAPVRR 226


>emb|CCH50976.1| T4.15 [Malus x robusta]
          Length = 986

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 31/68 (45%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
 Frame = -1

Query: 318  LRWMCAKTKKEKIRNECILENVGAVLISDKPRKI*TRWFTHVQQRQIPALVKR---NNQV 148
            LRWMC  T+K+KIRNE I   VG   I  K R+   RWF HVQ+R   A ++R     +V
Sbjct: 879  LRWMCGHTRKDKIRNEDIRGKVGVAEIQGKMRENQLRWFGHVQRRPTDAPIRRCDYGTEV 938

Query: 147  *GSKGAKR 124
             G +G  R
Sbjct: 939  QGRRGRGR 946


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