BLASTX nr result

ID: Akebia26_contig00027854 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia26_contig00027854
         (1043 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMS59319.1| V-type proton ATPase subunit B 2 [Triticum urartu]      67   2e-08
gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea]          64   8e-08
gb|EMS56299.1| Polycomb group protein EMBRYONIC FLOWER 2 [Tritic...    64   1e-07
emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse tr...    63   2e-07
gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptas...    61   9e-07

>gb|EMS59319.1| V-type proton ATPase subunit B 2 [Triticum urartu]
          Length = 605

 Score = 66.6 bits (161), Expect = 2e-08
 Identities = 40/118 (33%), Positives = 70/118 (59%), Gaps = 4/118 (3%)
 Frame = -1

Query: 815 YLSTKVISYIIRLWERLMK*GLRRKSKISDNQFGYRLG*ATIAAIFLFRYMKEKS*GNKR 636
           Y   K++S+ ++LWER+++  LRR + ++ NQFG+  G +T+ AIFL R + E+    K+
Sbjct: 60  YRGIKLMSHTMKLWERVIEHRLRRMTSVTKNQFGFMPGRSTMEAIFLVRQLMERYREQKK 119

Query: 635 RLSMWFLLT*RSK**STKVVNLMGIG----TIRYINIIKGMHERIVTSVRTNCVEANE 474
            L M F+   +S     + V    +       +YI +IK M++ +VTSVRT+ V+ ++
Sbjct: 120 DLHMVFIDLEKSYDKIPRNVMWWALKKHKVPAKYITLIKDMYDNVVTSVRTSDVDTDD 177


>gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea]
          Length = 562

 Score = 64.3 bits (155), Expect = 8e-08
 Identities = 39/112 (34%), Positives = 68/112 (60%), Gaps = 5/112 (4%)
 Frame = -1

Query: 815 YLSTKVISYIIRLWERLMK*GLRRKSKISDNQFGYRLG*ATIAAIFLFRYMKEKS*GNKR 636
           Y   K++++ ++LWER+++ GLR+++++++NQFG+  G +   AI+L R M E+   NKR
Sbjct: 131 YRGIKLMTHTMKLWERVIERGLRKETQVTENQFGFMSGRSITEAIYLLRRMMERYRSNKR 190

Query: 635 RLSMWFLLT*RS-----K**STKVVNLMGIGTIRYINIIKGMHERIVTSVRT 495
            L M F+   ++     +    KV+  M +  I YI  IK M++   TSV+T
Sbjct: 191 DLHMVFIDLEKAYDRVPREVLWKVLEKMRV-RIAYIRAIKDMYDGATTSVKT 241


>gb|EMS56299.1| Polycomb group protein EMBRYONIC FLOWER 2 [Triticum urartu]
          Length = 974

 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 38/118 (32%), Positives = 70/118 (59%), Gaps = 4/118 (3%)
 Frame = -1

Query: 815 YLSTKVISYIIRLWERLMK*GLRRKSKISDNQFGYRLG*ATIAAIFLFRYMKEKS*GNKR 636
           Y   K++S+ ++LWER+++  LRR + ++ NQFG+  G +T+ AIFL R + ++    K+
Sbjct: 26  YRGIKLMSHTMKLWERVIEHRLRRMTSVTKNQFGFMPGRSTMEAIFLVRQLMKRYREQKK 85

Query: 635 RLSMWFLLT*RSK**STKVVNLMGIG----TIRYINIIKGMHERIVTSVRTNCVEANE 474
            L M F+   ++     + V    +       +YI +IK M++ +VTSVRT+ V+ ++
Sbjct: 86  DLHMVFIDLEKAYDKIPRNVMWWALEKHKVPTKYITLIKDMYDNVVTSVRTSDVDIDD 143


>emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse transcriptase) [Malus
           domestica]
          Length = 622

 Score = 63.2 bits (152), Expect = 2e-07
 Identities = 38/112 (33%), Positives = 68/112 (60%), Gaps = 5/112 (4%)
 Frame = -1

Query: 815 YLSTKVISYIIRLWERLMK*GLRRKSKISDNQFGYRLG*ATIAAIFLFRYMKEKS*GNKR 636
           Y   K++S+ ++LWER+++  LR+++++SDNQFG+  G +T+ AI+L R + E+    K+
Sbjct: 241 YRGIKLMSHTMKLWERVIEHRLRQETRVSDNQFGFMPGRSTMEAIYLLRRLMERYRDGKK 300

Query: 635 RLSMWFLLT*R-----SK**STKVVNLMGIGTIRYINIIKGMHERIVTSVRT 495
            L M F+   +     S+    +++   G+  + YI  IK M+E   T+VRT
Sbjct: 301 DLHMVFIDLEKAYDRVSRDIIWRILEKKGV-RVAYIQAIKDMYEGAKTAVRT 351


>gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 517

 Score = 60.8 bits (146), Expect = 9e-07
 Identities = 37/111 (33%), Positives = 65/111 (58%), Gaps = 4/111 (3%)
 Frame = -1

Query: 815 YLSTKVISYIIRLWERLMK*GLRRKSKISDNQFGYRLG*ATIAAIFLFRYMKEKS*GNKR 636
           Y   K++S+ ++LWER++K  LR+++ ++DNQFG+ LG +T+ AI+L + + E+   +K+
Sbjct: 219 YRGIKLMSHTMKLWERVIKRRLRKETLVTDNQFGFMLGRSTMEAIYLLQRVMERYRTDKK 278

Query: 635 RLSMWFLLT*RSK**STKVVNLMGIG----TIRYINIIKGMHERIVTSVRT 495
            L + F    +      + +    +      I YI  IK M+ER  TSV+T
Sbjct: 279 DLHLVFFDLEKGYDRVPREILWKALEKKRVRIAYIRAIKDMYERASTSVKT 329


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