BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia26_contig00026844
         (1265 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37517.3| unnamed protein product [Vitis vinifera]              622   e-175
ref|XP_002264607.1| PREDICTED: DNA topoisomerase 3-alpha [Vitis ...   622   e-175
ref|XP_006341743.1| PREDICTED: DNA topoisomerase 3-alpha-like [S...   604   e-170
ref|XP_004239191.1| PREDICTED: DNA topoisomerase 3-alpha-like [S...   587   e-165
ref|XP_002307047.1| hypothetical protein POPTR_0005s06810g [Popu...   583   e-164
ref|XP_004289288.1| PREDICTED: DNA topoisomerase 3-alpha-like [F...   582   e-163
ref|XP_004502963.1| PREDICTED: DNA topoisomerase 3-alpha-like [C...   578   e-162
ref|XP_007048480.1| Topoisomerase 3alpha isoform 1 [Theobroma ca...   573   e-161
ref|XP_007048481.1| Topoisomerase 3alpha isoform 2, partial [The...   568   e-159
ref|XP_006465105.1| PREDICTED: DNA topoisomerase 3-alpha-like [C...   565   e-158
ref|XP_002527391.1| prokaryotic DNA topoisomerase, putative [Ric...   562   e-157
gb|EYU20574.1| hypothetical protein MIMGU_mgv1a000984mg [Mimulus...   553   e-155
ref|XP_004136599.1| PREDICTED: DNA topoisomerase 3-alpha-like [C...   553   e-155
gb|EPS73635.1| hypothetical protein M569_01118, partial [Genlise...   550   e-154
ref|XP_006829322.1| hypothetical protein AMTR_s00202p00033660 [A...   531   e-148
ref|XP_002864876.1| hypothetical protein ARALYDRAFT_496584 [Arab...   526   e-147
ref|NP_201197.1| topoisomerase 3alpha [Arabidopsis thaliana] gi|...   526   e-146
ref|XP_006394227.1| hypothetical protein EUTSA_v10003618mg [Eutr...   526   e-146
ref|XP_006279975.1| hypothetical protein CARUB_v10025845mg [Caps...   519   e-145
ref|XP_006581778.1| PREDICTED: DNA topoisomerase 3-alpha isoform...   512   e-142

>emb|CBI37517.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  622 bits (1604), Expect = e-175
 Identities = 300/419 (71%), Positives = 332/419 (79%)
 Frame = -1

Query: 1265 GGETTVEIDIAGELFSASGRVIIAKNYLDVYRFESWGGSMIPKYIFGQQFTPTTLTLDSG 1086
            G ET VEIDIAGE FS+SGRVIIAKNYLDVYRFESWGGSMIP Y+FGQQF PTTLTLDSG
Sbjct: 104  GAETIVEIDIAGESFSSSGRVIIAKNYLDVYRFESWGGSMIPTYVFGQQFIPTTLTLDSG 163

Query: 1085 VTRXXXXXXXXXXXSCMDKAGIGTDATMHDHIKKLLDRFYATKDANTRFSPTNLGEALVM 906
            VTR           +CMDKAGIGTDATMHDHIKKLLDRFYATKD+NTRFSPTNLGEALVM
Sbjct: 164  VTRPPPLLSEADLLNCMDKAGIGTDATMHDHIKKLLDRFYATKDSNTRFSPTNLGEALVM 223

Query: 905  GYDDMGYELWKPYLRSMMECDMKAVSTGTKRKSEVLETCLQQMKACFLDARVNRVKLLEA 726
            GYDDMGYELWKPYLRSMMECDMKAVS GTKR++EVL TCL+QMKACFLDAR+N+VKLLEA
Sbjct: 224  GYDDMGYELWKPYLRSMMECDMKAVSIGTKRRNEVLTTCLEQMKACFLDARLNKVKLLEA 283

Query: 725  MAIFFDRSNRPGGDEQSVVGDIVRPCGACHESDMTLKQRPDGKFMVGCLGFPQCRNVVWL 546
            MA+FF+RSNR  GDEQ  VGD+VR C  C ESDM L+++PDG FMVGCLG+PQCRNVVWL
Sbjct: 284  MALFFERSNRSSGDEQHEVGDVVRQCTLCQESDMVLRRKPDGNFMVGCLGYPQCRNVVWL 343

Query: 545  PGSTSEAAVTTQVCNSCTPGPVFMIQLKFRQMEIPPNYDTDHLGCIGGCDETLRQLIEIC 366
            PGS SEAA+TT  CN CTPGPV+ IQ KFR++EIPPNY+ DHLGC+ GCDE LRQL EIC
Sbjct: 344  PGSISEAAITTISCNHCTPGPVYKIQFKFRRLEIPPNYNIDHLGCVCGCDEILRQLTEIC 403

Query: 365  RTGSRNTVPVNAAXXXXXXXXXXXXXXXXXXXSACIHCRQTGHSSNDCXXXXXXXXXXXX 186
             TGSR      +A                   +ACIHC QTGHSSNDC            
Sbjct: 404  GTGSR-----ISARGRGSNASSTNAQRSNTRQTACIHCSQTGHSSNDCPSRVPRSRNSQS 458

Query: 185  XXXXXXSGETSIPCNICGTPCSVRTANTANNKGRKFYSCQIRECNFFVWEDSINNSTAG 9
                  SGE+SIPCN+CGTPC +RTANT NN+GRKFYSCQ +ECNFFVWEDS+N+S+ G
Sbjct: 459  HRTNMPSGESSIPCNVCGTPCILRTANTENNRGRKFYSCQSQECNFFVWEDSLNSSSGG 517


>ref|XP_002264607.1| PREDICTED: DNA topoisomerase 3-alpha [Vitis vinifera]
          Length = 914

 Score =  622 bits (1604), Expect = e-175
 Identities = 300/419 (71%), Positives = 332/419 (79%)
 Frame = -1

Query: 1265 GGETTVEIDIAGELFSASGRVIIAKNYLDVYRFESWGGSMIPKYIFGQQFTPTTLTLDSG 1086
            G ET VEIDIAGE FS+SGRVIIAKNYLDVYRFESWGGSMIP Y+FGQQF PTTLTLDSG
Sbjct: 429  GAETIVEIDIAGESFSSSGRVIIAKNYLDVYRFESWGGSMIPTYVFGQQFIPTTLTLDSG 488

Query: 1085 VTRXXXXXXXXXXXSCMDKAGIGTDATMHDHIKKLLDRFYATKDANTRFSPTNLGEALVM 906
            VTR           +CMDKAGIGTDATMHDHIKKLLDRFYATKD+NTRFSPTNLGEALVM
Sbjct: 489  VTRPPPLLSEADLLNCMDKAGIGTDATMHDHIKKLLDRFYATKDSNTRFSPTNLGEALVM 548

Query: 905  GYDDMGYELWKPYLRSMMECDMKAVSTGTKRKSEVLETCLQQMKACFLDARVNRVKLLEA 726
            GYDDMGYELWKPYLRSMMECDMKAVS GTKR++EVL TCL+QMKACFLDAR+N+VKLLEA
Sbjct: 549  GYDDMGYELWKPYLRSMMECDMKAVSIGTKRRNEVLTTCLEQMKACFLDARLNKVKLLEA 608

Query: 725  MAIFFDRSNRPGGDEQSVVGDIVRPCGACHESDMTLKQRPDGKFMVGCLGFPQCRNVVWL 546
            MA+FF+RSNR  GDEQ  VGD+VR C  C ESDM L+++PDG FMVGCLG+PQCRNVVWL
Sbjct: 609  MALFFERSNRSSGDEQHEVGDVVRQCTLCQESDMVLRRKPDGNFMVGCLGYPQCRNVVWL 668

Query: 545  PGSTSEAAVTTQVCNSCTPGPVFMIQLKFRQMEIPPNYDTDHLGCIGGCDETLRQLIEIC 366
            PGS SEAA+TT  CN CTPGPV+ IQ KFR++EIPPNY+ DHLGC+ GCDE LRQL EIC
Sbjct: 669  PGSISEAAITTISCNHCTPGPVYKIQFKFRRLEIPPNYNIDHLGCVCGCDEILRQLTEIC 728

Query: 365  RTGSRNTVPVNAAXXXXXXXXXXXXXXXXXXXSACIHCRQTGHSSNDCXXXXXXXXXXXX 186
             TGSR      +A                   +ACIHC QTGHSSNDC            
Sbjct: 729  GTGSR-----ISARGRGSNASSTNAQRSNTRQTACIHCSQTGHSSNDCPSRVPRSRNSQS 783

Query: 185  XXXXXXSGETSIPCNICGTPCSVRTANTANNKGRKFYSCQIRECNFFVWEDSINNSTAG 9
                  SGE+SIPCN+CGTPC +RTANT NN+GRKFYSCQ +ECNFFVWEDS+N+S+ G
Sbjct: 784  HRTNMPSGESSIPCNVCGTPCILRTANTENNRGRKFYSCQSQECNFFVWEDSLNSSSGG 842


>ref|XP_006341743.1| PREDICTED: DNA topoisomerase 3-alpha-like [Solanum tuberosum]
          Length = 915

 Score =  604 bits (1558), Expect = e-170
 Identities = 293/421 (69%), Positives = 321/421 (76%)
 Frame = -1

Query: 1265 GGETTVEIDIAGELFSASGRVIIAKNYLDVYRFESWGGSMIPKYIFGQQFTPTTLTLDSG 1086
            G ET VEIDIAGE FSA GRVI+AKNYLDVYRFESWGGS+IP Y FGQQFTPTTLTLDSG
Sbjct: 439  GAETIVEIDIAGESFSACGRVILAKNYLDVYRFESWGGSVIPTYSFGQQFTPTTLTLDSG 498

Query: 1085 VTRXXXXXXXXXXXSCMDKAGIGTDATMHDHIKKLLDRFYATKDANTRFSPTNLGEALVM 906
            VTR            CMDKAGIGTDATMHDHIKKLLDRFYA KD+NTRFSPT LGEALVM
Sbjct: 499  VTRPPPLLSEADLLGCMDKAGIGTDATMHDHIKKLLDRFYAIKDSNTRFSPTKLGEALVM 558

Query: 905  GYDDMGYELWKPYLRSMMECDMKAVSTGTKRKSEVLETCLQQMKACFLDARVNRVKLLEA 726
            GYDDMGYELWKPYLR+MMECDMKAVS GTKRK+EVLETCLQQMKACF DAR N+ KLLEA
Sbjct: 559  GYDDMGYELWKPYLRAMMECDMKAVSIGTKRKAEVLETCLQQMKACFSDARTNKGKLLEA 618

Query: 725  MAIFFDRSNRPGGDEQSVVGDIVRPCGACHESDMTLKQRPDGKFMVGCLGFPQCRNVVWL 546
            MAIFF+RSNR  G EQ  VGD+VR CG C ESDM L+Q+PDG FMVGCLG+PQCRNVVWL
Sbjct: 619  MAIFFERSNRSSGGEQQAVGDVVRRCGLCLESDMVLRQKPDGNFMVGCLGYPQCRNVVWL 678

Query: 545  PGSTSEAAVTTQVCNSCTPGPVFMIQLKFRQMEIPPNYDTDHLGCIGGCDETLRQLIEIC 366
            PGS SEA+VT   C SC+PGPVF IQ KFR++EIPPNY   HLGCIGGCD+ LRQL+EIC
Sbjct: 679  PGSVSEASVTENTCTSCSPGPVFKIQFKFRRLEIPPNYSVQHLGCIGGCDDILRQLVEIC 738

Query: 365  RTGSRNTVPVNAAXXXXXXXXXXXXXXXXXXXSACIHCRQTGHSSNDCXXXXXXXXXXXX 186
             TGSRN    +                     S+C +CRQTGH SNDC            
Sbjct: 739  GTGSRNNSNTSGRGRGNPTASSSAQRGNSRAQSSCAYCRQTGHLSNDC--PSQASRGRTA 796

Query: 185  XXXXXXSGETSIPCNICGTPCSVRTANTANNKGRKFYSCQIRECNFFVWEDSINNSTAGS 6
                  +GE+SIPCN CG PC +RTANTANN+GRKF+SCQ +ECNFFVWED++N   A  
Sbjct: 797  RAQEVDNGESSIPCNSCGAPCILRTANTANNRGRKFFSCQSQECNFFVWEDNLNGGRAER 856

Query: 5    A 3
            A
Sbjct: 857  A 857


>ref|XP_004239191.1| PREDICTED: DNA topoisomerase 3-alpha-like [Solanum lycopersicum]
          Length = 910

 Score =  587 bits (1514), Expect = e-165
 Identities = 288/421 (68%), Positives = 317/421 (75%)
 Frame = -1

Query: 1265 GGETTVEIDIAGELFSASGRVIIAKNYLDVYRFESWGGSMIPKYIFGQQFTPTTLTLDSG 1086
            G ET VEIDIAGE FSA GRVI+AKNYLDVYRFESWGGS+IP Y FGQQFTPTTLTLDSG
Sbjct: 439  GAETIVEIDIAGESFSACGRVILAKNYLDVYRFESWGGSVIPTYSFGQQFTPTTLTLDSG 498

Query: 1085 VTRXXXXXXXXXXXSCMDKAGIGTDATMHDHIKKLLDRFYATKDANTRFSPTNLGEALVM 906
            V R            CMDKAGIGTDATMHDHIKKLLDRFYA KD+NTRFSPT LGEALVM
Sbjct: 499  VIRPPPLLSEADLLGCMDKAGIGTDATMHDHIKKLLDRFYAIKDSNTRFSPTKLGEALVM 558

Query: 905  GYDDMGYELWKPYLRSMMECDMKAVSTGTKRKSEVLETCLQQMKACFLDARVNRVKLLEA 726
            GYDDMGYELWKPYLR+MMECDMKAVSTGTKRK+EVLETCLQQMKACF DAR N+ KLLEA
Sbjct: 559  GYDDMGYELWKPYLRAMMECDMKAVSTGTKRKAEVLETCLQQMKACFSDARTNKEKLLEA 618

Query: 725  MAIFFDRSNRPGGDEQSVVGDIVRPCGACHESDMTLKQRPDGKFMVGCLGFPQCRNVVWL 546
            MAIFF+RSNR    EQ  VG +VR CG C ESDM L+Q+PDG FMVGCLG+PQCRNVVWL
Sbjct: 619  MAIFFERSNRSSSGEQQAVGAVVRRCGLCLESDMVLRQKPDGNFMVGCLGYPQCRNVVWL 678

Query: 545  PGSTSEAAVTTQVCNSCTPGPVFMIQLKFRQMEIPPNYDTDHLGCIGGCDETLRQLIEIC 366
            PGS SEA+VT   C +C+PGPVF IQ KFRQ EIPP+Y   HLGCIGGCD+ LRQL+EIC
Sbjct: 679  PGSVSEASVTENTCITCSPGPVFKIQFKFRQQEIPPDYSVQHLGCIGGCDDILRQLVEIC 738

Query: 365  RTGSRNTVPVNAAXXXXXXXXXXXXXXXXXXXSACIHCRQTGHSSNDCXXXXXXXXXXXX 186
             TGSR     N+                    S+C +CRQTGH SNDC            
Sbjct: 739  GTGSR-----NSRGRGNPTAFSSAQRDNSRAQSSCAYCRQTGHLSNDC--PSQASRDRTA 791

Query: 185  XXXXXXSGETSIPCNICGTPCSVRTANTANNKGRKFYSCQIRECNFFVWEDSINNSTAGS 6
                  +GE+S+PCN CG PC +RTANTANN+GRKF+SCQ  ECNFFVWED+++   A  
Sbjct: 792  RAQEVDNGESSMPCNSCGAPCILRTANTANNRGRKFFSCQSSECNFFVWEDNLSGGRAER 851

Query: 5    A 3
            A
Sbjct: 852  A 852


>ref|XP_002307047.1| hypothetical protein POPTR_0005s06810g [Populus trichocarpa]
            gi|222856496|gb|EEE94043.1| hypothetical protein
            POPTR_0005s06810g [Populus trichocarpa]
          Length = 910

 Score =  583 bits (1503), Expect = e-164
 Identities = 284/426 (66%), Positives = 318/426 (74%), Gaps = 8/426 (1%)
 Frame = -1

Query: 1265 GGETTVEIDIAGELFSASGRVIIAKNYLDVYRFESWGGSMIPKYIFGQQFTPTTLTLDSG 1086
            G ET VEIDIAGE FSASGRVI+AKNYLDVYRFESWG SMIP Y+ GQQF P TLTLDSG
Sbjct: 430  GAETVVEIDIAGERFSASGRVILAKNYLDVYRFESWGDSMIPTYLQGQQFIPATLTLDSG 489

Query: 1085 VTRXXXXXXXXXXXSCMDKAGIGTDATMHDHIKKLLDRFYATKDANTRFSPTNLGEALVM 906
            VTR           SCMDKAGIGTDATMHDHIKKLLDRFY TKDANTRFSPTNLGEALVM
Sbjct: 490  VTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYVTKDANTRFSPTNLGEALVM 549

Query: 905  GYDDMGYELWKPYLRSMMECDMKAVSTGTKRKSEVLETCLQQMKACFLDARVNRVKLLEA 726
            GYDDMGYELWKP LRS+MECDMK VS G K K+EVL TCLQQMKACFLDA+VN+VKLLEA
Sbjct: 550  GYDDMGYELWKPNLRSLMECDMKEVSVGNKSKAEVLATCLQQMKACFLDAKVNKVKLLEA 609

Query: 725  MAIFFDRSNRPGGDEQSVVGDIVRPCGACHESDMTLKQRPDGKFMVGCLGFPQCRNVVWL 546
            MAIFF+RS+R  GD+ S +G+ VRPCG C E++M LK+  DG FMVGC GFPQCRN VWL
Sbjct: 610  MAIFFNRSDRSNGDDSSALGENVRPCGLCQEANMVLKKNRDGNFMVGCSGFPQCRNAVWL 669

Query: 545  PGSTSEAAVTTQVCNSCTPGPVFMIQLKFRQMEIPPNYDTDHLGCIGGCDETLRQLIEIC 366
            PG   EA +T  +CNSCTPGPV++IQ KFRQ+EIPP ++ +HLGCIGGCDETLRQLIEIC
Sbjct: 670  PGPVLEATITNNICNSCTPGPVYLIQFKFRQLEIPPGFNVNHLGCIGGCDETLRQLIEIC 729

Query: 365  RTGSR--------NTVPVNAAXXXXXXXXXXXXXXXXXXXSACIHCRQTGHSSNDCXXXX 210
             TGSR         T P N                     + CI+C QTGH+S DC    
Sbjct: 730  GTGSRVQGGNGPPTTTPSN-------------PQRSNSRQAPCIYCYQTGHASTDCPSRI 776

Query: 209  XXXXXXXXXXXXXXSGETSIPCNICGTPCSVRTANTANNKGRKFYSCQIRECNFFVWEDS 30
                          +GE+SIPC+ CGTPC +RTANTANN+GRKFYSC  + CNFFVWED+
Sbjct: 777  SATRHVQSHGMNQQNGESSIPCSTCGTPCVLRTANTANNRGRKFYSCSSQACNFFVWEDN 836

Query: 29   INNSTA 12
            +NN +A
Sbjct: 837  LNNGSA 842


>ref|XP_004289288.1| PREDICTED: DNA topoisomerase 3-alpha-like [Fragaria vesca subsp.
            vesca]
          Length = 908

 Score =  582 bits (1499), Expect = e-163
 Identities = 276/419 (65%), Positives = 311/419 (74%)
 Frame = -1

Query: 1265 GGETTVEIDIAGELFSASGRVIIAKNYLDVYRFESWGGSMIPKYIFGQQFTPTTLTLDSG 1086
            G ETTVEIDIAGE+FSASGRVI+AKNYLDVYRFESWGGS++P Y  GQQF PTTLTLDSG
Sbjct: 430  GAETTVEIDIAGEMFSASGRVILAKNYLDVYRFESWGGSLLPTYAVGQQFMPTTLTLDSG 489

Query: 1085 VTRXXXXXXXXXXXSCMDKAGIGTDATMHDHIKKLLDRFYATKDANTRFSPTNLGEALVM 906
            VTR            CMDK GIGTDATMHDHIKKLLDRFYATKDANTRFSPTNLGEALVM
Sbjct: 490  VTRPPPLLSEADLLGCMDKEGIGTDATMHDHIKKLLDRFYATKDANTRFSPTNLGEALVM 549

Query: 905  GYDDMGYELWKPYLRSMMECDMKAVSTGTKRKSEVLETCLQQMKACFLDARVNRVKLLEA 726
            GYDDMGY+LWKPYLR++ME DMKAVS G K K+EVLETCLQQMK CFLDAR N+VKL EA
Sbjct: 550  GYDDMGYKLWKPYLRAVMERDMKAVSEGNKSKAEVLETCLQQMKGCFLDARQNKVKLFEA 609

Query: 725  MAIFFDRSNRPGGDEQSVVGDIVRPCGACHESDMTLKQRPDGKFMVGCLGFPQCRNVVWL 546
            MA+FF+RSNRPGGD+Q   G+ +R CG C E+DM L++  DG FMVGC+G+PQCRN +WL
Sbjct: 610  MAVFFERSNRPGGDDQHTSGEFIRRCGLCQEADMVLRKNRDGNFMVGCMGYPQCRNAIWL 669

Query: 545  PGSTSEAAVTTQVCNSCTPGPVFMIQLKFRQMEIPPNYDTDHLGCIGGCDETLRQLIEIC 366
            PGS SEA  TT +CNSCTPGPV +IQ  FR++EIPPNY T+HLGCIGGCDE LRQL EIC
Sbjct: 670  PGSVSEAVATTNICNSCTPGPVHLIQFTFRRLEIPPNYSTNHLGCIGGCDEILRQLTEIC 729

Query: 365  RTGSRNTVPVNAAXXXXXXXXXXXXXXXXXXXSACIHCRQTGHSSNDCXXXXXXXXXXXX 186
             TGSR      +A                    ACI+C Q+GHSS DC            
Sbjct: 730  GTGSR------SAARGRGPTTSSNVQQNNTRQGACIYCHQSGHSSGDCPSQSSGPRSVRP 783

Query: 185  XXXXXXSGETSIPCNICGTPCSVRTANTANNKGRKFYSCQIRECNFFVWEDSINNSTAG 9
                  SGE S+ C  CG PC +RTANT  N+GRKFY C  +ECNFFVWED+++N   G
Sbjct: 784  RTMNAQSGEISVSCTTCGAPCVLRTANTTQNRGRKFYKCPSQECNFFVWEDNVSNGNGG 842


>ref|XP_004502963.1| PREDICTED: DNA topoisomerase 3-alpha-like [Cicer arietinum]
          Length = 920

 Score =  578 bits (1489), Expect = e-162
 Identities = 281/423 (66%), Positives = 319/423 (75%), Gaps = 2/423 (0%)
 Frame = -1

Query: 1265 GGETTVEIDIAGELFSASGRVIIAKNYLDVYRFESWGGSMIPKYIFGQQFTPTTLTLDSG 1086
            G ETTVEIDIAGELFSA GRVI+ KNYLDVY++ESWGGS+IP Y  GQQF PTTLTLDSG
Sbjct: 434  GAETTVEIDIAGELFSACGRVILEKNYLDVYQYESWGGSIIPTYTIGQQFIPTTLTLDSG 493

Query: 1085 VTRXXXXXXXXXXXSCMDKAGIGTDATMHDHIKKLLDRFYATKDANTRFSPTNLGEALVM 906
            VTR           SCMDK GIGTDATMHDHIKKLLDRFYATKDA+ RF+PTNLGEALVM
Sbjct: 494  VTRPPPPLSEADLLSCMDKEGIGTDATMHDHIKKLLDRFYATKDASMRFTPTNLGEALVM 553

Query: 905  GYDDMGYELWKPYLRSMMECDMKAVSTGTKRKSEVLETCLQQMKACFLDARVNRVKLLEA 726
            GYDDMGY+LWKPYLR++ME DMK+VS GTK K+EVL+T LQQMKACFLDAR+N+VKLLEA
Sbjct: 554  GYDDMGYKLWKPYLRAVMERDMKSVSEGTKSKTEVLDTSLQQMKACFLDARLNKVKLLEA 613

Query: 725  MAIFFDRSNRPGGDEQSVVGDIVRPCGACHESDMTLKQRPDGKFMVGCLGFPQCRNVVWL 546
            M IFF+RSNR GG+EQ+ +G++VR CG C ESDM LK+  DG FMVGCLGFPQCRN VWL
Sbjct: 614  MGIFFERSNRSGGEEQNAIGEVVRRCGLCRESDMVLKKSRDGNFMVGCLGFPQCRNAVWL 673

Query: 545  PGSTSEAAVTTQVCNSCTPGPVFMIQLKFRQMEIPPNYDTDHLGCIGGCDETLRQLIEIC 366
            PGS SEA VTT  C++CTPGPV+ IQ KFRQ+EIPPNYD +HLGCIGGCDE L QL EIC
Sbjct: 674  PGSVSEAVVTTNTCSNCTPGPVYRIQFKFRQLEIPPNYDVNHLGCIGGCDEILTQLTEIC 733

Query: 365  RTGSRNTVPVNAAXXXXXXXXXXXXXXXXXXXSACIHCRQTGHSSNDC--XXXXXXXXXX 192
             TG     P   A                   + C++C++TGHSSNDC            
Sbjct: 734  GTG-----PRMPARPRGPTTSTGNAHHTNPRQAVCMNCQETGHSSNDCPSQTLRSRNARQ 788

Query: 191  XXXXXXXXSGETSIPCNICGTPCSVRTANTANNKGRKFYSCQIRECNFFVWEDSINNSTA 12
                    SGE S+ CN CGTPC +RTANTANN+GRKFYSC  +ECNFFVWED +N+ T 
Sbjct: 789  HGNVMNQQSGEASVSCNSCGTPCVLRTANTANNRGRKFYSCPSQECNFFVWEDDLNSGTG 848

Query: 11   GSA 3
            G +
Sbjct: 849  GGS 851


>ref|XP_007048480.1| Topoisomerase 3alpha isoform 1 [Theobroma cacao]
            gi|508700741|gb|EOX92637.1| Topoisomerase 3alpha isoform
            1 [Theobroma cacao]
          Length = 914

 Score =  573 bits (1478), Expect = e-161
 Identities = 277/419 (66%), Positives = 313/419 (74%)
 Frame = -1

Query: 1265 GGETTVEIDIAGELFSASGRVIIAKNYLDVYRFESWGGSMIPKYIFGQQFTPTTLTLDSG 1086
            G ETTVEIDIA E FS SGRVI+ +NYLDVYR+ESWGGSMIP Y  GQQF PT+LTLD+G
Sbjct: 433  GAETTVEIDIADEQFSTSGRVILERNYLDVYRYESWGGSMIPTYTLGQQFIPTSLTLDTG 492

Query: 1085 VTRXXXXXXXXXXXSCMDKAGIGTDATMHDHIKKLLDRFYATKDANTRFSPTNLGEALVM 906
            VTR           SCMDKAGIGTDATMHDHIKKLLDRFYATKD+NTRFSPT LGEALVM
Sbjct: 493  VTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYATKDSNTRFSPTKLGEALVM 552

Query: 905  GYDDMGYELWKPYLRSMMECDMKAVSTGTKRKSEVLETCLQQMKACFLDARVNRVKLLEA 726
            GYDDMGYELWKP LRSMME DMK VS G KRK EVL TCLQQMKACFLDAR+N+VKLLEA
Sbjct: 553  GYDDMGYELWKPNLRSMMEFDMKEVSVGNKRKDEVLATCLQQMKACFLDARLNKVKLLEA 612

Query: 725  MAIFFDRSNRPGGDEQSVVGDIVRPCGACHESDMTLKQRPDGKFMVGCLGFPQCRNVVWL 546
            MA+FF+RSN+  GD+  V G++VR CG C ES M LK+  DG FMVGCLGFPQCRN +WL
Sbjct: 613  MAVFFERSNQSAGDDNHVAGEVVRQCGLCRESSMVLKKNRDGNFMVGCLGFPQCRNAIWL 672

Query: 545  PGSTSEAAVTTQVCNSCTPGPVFMIQLKFRQMEIPPNYDTDHLGCIGGCDETLRQLIEIC 366
            PGS  EAAVT+ +C SC PGPV++IQ KFRQ+EIPP ++ +HLGCIGGCD+ LRQLIEIC
Sbjct: 673  PGSVLEAAVTSNICGSCNPGPVYLIQFKFRQLEIPPGFNANHLGCIGGCDDILRQLIEIC 732

Query: 365  RTGSRNTVPVNAAXXXXXXXXXXXXXXXXXXXSACIHCRQTGHSSNDCXXXXXXXXXXXX 186
             TGSR      +A                    AC++C+QTGHSSNDC            
Sbjct: 733  GTGSR-----MSARGRGPTTTSSNVQRNSSRQGACLYCQQTGHSSNDC-PSQFSGSRNSR 786

Query: 185  XXXXXXSGETSIPCNICGTPCSVRTANTANNKGRKFYSCQIRECNFFVWEDSINNSTAG 9
                  +GE S+ C+ CGTPC +RTANTANN+GRKFYSC  +ECNFF+WED  NN T G
Sbjct: 787  SRTSSQNGEPSVSCSTCGTPCVLRTANTANNRGRKFYSCPSQECNFFIWEDEHNNGTGG 845


>ref|XP_007048481.1| Topoisomerase 3alpha isoform 2, partial [Theobroma cacao]
            gi|508700742|gb|EOX92638.1| Topoisomerase 3alpha isoform
            2, partial [Theobroma cacao]
          Length = 845

 Score =  568 bits (1465), Expect = e-159
 Identities = 275/417 (65%), Positives = 310/417 (74%), Gaps = 2/417 (0%)
 Frame = -1

Query: 1265 GGETTVEIDIAGELFSASGRVIIAKNYLDVYRFESWGGSMIPKYIFGQQFTPTTLTLDSG 1086
            G ETTVEIDIA E FS SGRVI+ +NYLDVYR+ESWGGSMIP Y  GQQF PT+LTLD+G
Sbjct: 433  GAETTVEIDIADEQFSTSGRVILERNYLDVYRYESWGGSMIPTYTLGQQFIPTSLTLDTG 492

Query: 1085 VTRXXXXXXXXXXXSCMDKAGIGTDATMHDHIKKLLDRFYATKDANTRFSPTNLGEALVM 906
            VTR           SCMDKAGIGTDATMHDHIKKLLDRFYATKD+NTRFSPT LGEALVM
Sbjct: 493  VTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYATKDSNTRFSPTKLGEALVM 552

Query: 905  GYDDMGYELWKPYLRSMMECDMKAVSTGTKRKSEVLETCLQQMKACFLDARVNRVKLLEA 726
            GYDDMGYELWKP LRSMME DMK VS G KRK EVL TCLQQMKACFLDAR+N+VKLLEA
Sbjct: 553  GYDDMGYELWKPNLRSMMEFDMKEVSVGNKRKDEVLATCLQQMKACFLDARLNKVKLLEA 612

Query: 725  MAIFFDRSNRPGGDEQSVVGDIVRPCGACHESDMTLKQRPDGKFMVGCLGFPQCRNVVWL 546
            MA+FF+RSN+  GD+  V G++VR CG C ES M LK+  DG FMVGCLGFPQCRN +WL
Sbjct: 613  MAVFFERSNQSAGDDNHVAGEVVRQCGLCRESSMVLKKNRDGNFMVGCLGFPQCRNAIWL 672

Query: 545  PGSTSEAAVTTQVCNSCTPGPVFMIQLKFRQMEIPPNYDTDHLGCIGGCDETLRQLIEIC 366
            PGS  EAAVT+ +C SC PGPV++IQ KFRQ+EIPP ++ +HLGCIGGCD+ LRQLIEIC
Sbjct: 673  PGSVLEAAVTSNICGSCNPGPVYLIQFKFRQLEIPPGFNANHLGCIGGCDDILRQLIEIC 732

Query: 365  RTGSRNTVPVNAAXXXXXXXXXXXXXXXXXXXSACIHCRQTGHSSNDC--XXXXXXXXXX 192
             TGSR      +A                    AC++C+QTGHSSNDC            
Sbjct: 733  GTGSR-----MSARGRGPTTTSSNVQRNSSRQGACLYCQQTGHSSNDCPSQFSGSRNSRS 787

Query: 191  XXXXXXXXSGETSIPCNICGTPCSVRTANTANNKGRKFYSCQIRECNFFVWEDSINN 21
                     GE S+ C+ CGTPC +RTANTANN+GRKFYSC  +ECNFF+WED  NN
Sbjct: 788  RTSSQNGMQGEPSVSCSTCGTPCVLRTANTANNRGRKFYSCPSQECNFFIWEDEHNN 844


>ref|XP_006465105.1| PREDICTED: DNA topoisomerase 3-alpha-like [Citrus sinensis]
          Length = 940

 Score =  565 bits (1457), Expect = e-158
 Identities = 279/417 (66%), Positives = 310/417 (74%)
 Frame = -1

Query: 1265 GGETTVEIDIAGELFSASGRVIIAKNYLDVYRFESWGGSMIPKYIFGQQFTPTTLTLDSG 1086
            G ET VEI+IAGE+FS SGRVI+AKNYLDVYRFESWGG +IP Y+ GQQF PTTLTLDSG
Sbjct: 465  GAETIVEINIAGEVFSTSGRVILAKNYLDVYRFESWGGLVIPTYVHGQQFIPTTLTLDSG 524

Query: 1085 VTRXXXXXXXXXXXSCMDKAGIGTDATMHDHIKKLLDRFYATKDANTRFSPTNLGEALVM 906
            VTR           SCMDKAGIGTDATMHDHIKKLLDRFYA KDANTRF+PTN+GEALVM
Sbjct: 525  VTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYAIKDANTRFAPTNIGEALVM 584

Query: 905  GYDDMGYELWKPYLRSMMECDMKAVSTGTKRKSEVLETCLQQMKACFLDARVNRVKLLEA 726
            GYDDMGYELWKP LRSMME DMK VS G K K++VL  CLQQMKACFLDAR+ +VKLLEA
Sbjct: 585  GYDDMGYELWKPNLRSMMESDMKEVSVGNKSKADVLANCLQQMKACFLDARLKKVKLLEA 644

Query: 725  MAIFFDRSNRPGGDEQSVVGDIVRPCGACHESDMTLKQRPDGKFMVGCLGFPQCRNVVWL 546
            M IFF+RS   GG++Q   G++VR CG C ES+M LK+  DG  MVGCL FPQCRN VWL
Sbjct: 645  MGIFFERS---GGEDQQAAGEVVRQCGICQESNMVLKKSRDGNLMVGCLAFPQCRNAVWL 701

Query: 545  PGSTSEAAVTTQVCNSCTPGPVFMIQLKFRQMEIPPNYDTDHLGCIGGCDETLRQLIEIC 366
            PGS SEAAVTT  CNSCTPGPV++IQ KFRQ EIPP ++ +HLGCIGGCDETLRQLIEIC
Sbjct: 702  PGSVSEAAVTTNTCNSCTPGPVYLIQFKFRQHEIPPGFNVNHLGCIGGCDETLRQLIEIC 761

Query: 365  RTGSRNTVPVNAAXXXXXXXXXXXXXXXXXXXSACIHCRQTGHSSNDCXXXXXXXXXXXX 186
             TGSR  +P   A                    ACI+C+Q GHSS+DC            
Sbjct: 762  GTGSR--IP---ARGRGPTASSNNGQQSNHRQRACIYCQQMGHSSSDCPSQFSGSRNARA 816

Query: 185  XXXXXXSGETSIPCNICGTPCSVRTANTANNKGRKFYSCQIRECNFFVWEDSINNST 15
                  SGE+SI C  CGTPC +RTANTANN+GRKFYSC  +ECNFFVWED   N T
Sbjct: 817  NGMNPQSGESSIQCTTCGTPCVLRTANTANNRGRKFYSCSSQECNFFVWEDDAKNGT 873


>ref|XP_002527391.1| prokaryotic DNA topoisomerase, putative [Ricinus communis]
            gi|223533243|gb|EEF34998.1| prokaryotic DNA
            topoisomerase, putative [Ricinus communis]
          Length = 833

 Score =  562 bits (1448), Expect = e-157
 Identities = 273/415 (65%), Positives = 307/415 (73%), Gaps = 8/415 (1%)
 Frame = -1

Query: 1265 GGETTVEIDIAGELFSASGRVIIAKNYLDVYRFESWGGSMIPKYIFGQQFTPTTLTLDSG 1086
            G ETTVEIDIAGE FSASGRVI+AKNYLDVYRFESWGGSMIP Y+ GQQF PTTLTLDSG
Sbjct: 432  GAETTVEIDIAGEQFSASGRVILAKNYLDVYRFESWGGSMIPTYVHGQQFMPTTLTLDSG 491

Query: 1085 VTRXXXXXXXXXXXSCMDKAGIGTDATMHDHIKKLLDRFYATKDANTRFSPTNLGEALVM 906
            VTR           SCMDKAGIGTDATMHDHIKKLLDRFYATKDANTRFSPTNLGEALVM
Sbjct: 492  VTRPPPLLSESDLLSCMDKAGIGTDATMHDHIKKLLDRFYATKDANTRFSPTNLGEALVM 551

Query: 905  GYDDMGYELWKPYLRSMMECDMKAVSTGTKRKSEVLETCLQQMKACFLDARVNRVKLLEA 726
            GYDDMGYELWKP LRSMME DMK VS G K K+EVLETCLQQMK CFLDAR+N+VKLLEA
Sbjct: 552  GYDDMGYELWKPNLRSMMEYDMKEVSMGHKSKAEVLETCLQQMKTCFLDARINKVKLLEA 611

Query: 725  MAIFFDRSNRPGGDEQSVVGDIVRPCGACHESDMTLKQRPDGKFMVGCLGFPQCRNVVWL 546
            MA+FF+RS+R  G++     DIVR CG C E++M L++  DG FMVGC+G+PQCRN +WL
Sbjct: 612  MAVFFERSDRSSGNDNHATVDIVRQCGLCRETNMVLRRNRDGNFMVGCMGYPQCRNAIWL 671

Query: 545  PGSTSEAAVTTQVCNSCTPGPVFMIQLKFRQMEIPPNYDTDHLGCIGGCDETLRQLIEIC 366
            PG   EA VTT VCN CTPGPV++IQ KFRQ+EIPP +  +HLGCIGGCD+TLRQL +IC
Sbjct: 672  PGPIIEATVTTSVCNYCTPGPVYLIQFKFRQLEIPPGFSVNHLGCIGGCDDTLRQLTDIC 731

Query: 365  RTGSR--------NTVPVNAAXXXXXXXXXXXXXXXXXXXSACIHCRQTGHSSNDCXXXX 210
             TGSR        NT P N+                    + C+HC QTGH+S DC    
Sbjct: 732  GTGSRVQARARAPNTTPSNS-------------QQSNTRFATCVHCHQTGHASIDCPLQL 778

Query: 209  XXXXXXXXXXXXXXSGETSIPCNICGTPCSVRTANTANNKGRKFYSCQIRECNFF 45
                           GE+S+ C  CGTPC++RTANTANN+GRKFYSC  + CNFF
Sbjct: 779  SGSRRVQSRGTNEQMGESSVTCGTCGTPCALRTANTANNRGRKFYSCPSQSCNFF 833


>gb|EYU20574.1| hypothetical protein MIMGU_mgv1a000984mg [Mimulus guttatus]
          Length = 923

 Score =  553 bits (1424), Expect = e-155
 Identities = 271/418 (64%), Positives = 310/418 (74%), Gaps = 3/418 (0%)
 Frame = -1

Query: 1265 GGETTVEIDIAGELFSASGRVIIAKNYLDVYRFESWGGSMIPKYIFGQQFTPTTLTLDSG 1086
            G  TTV+IDIAGE FSASG VI+AKNYLDVYRFE+WGGSMIP Y +GQQFTPTTLTLDSG
Sbjct: 440  GAVTTVDIDIAGEQFSASGTVILAKNYLDVYRFETWGGSMIPTYNYGQQFTPTTLTLDSG 499

Query: 1085 VTRXXXXXXXXXXXSCMDKAGIGTDATMHDHIKKLLDRFYATKDANTRFSPTNLGEALVM 906
            VTR           SCMD AGIGTDATMHDHIKKLLDRFYATKD+N RFSPT LGEALV 
Sbjct: 500  VTRPPPLLSEADLLSCMDNAGIGTDATMHDHIKKLLDRFYATKDSNMRFSPTKLGEALVK 559

Query: 905  GYDDMGYELWKPYLRSMMECDMKAVSTGTKRKSEVLETCLQQMKACFLDARVNRVKLLEA 726
            GYDDMGYELWKP LR+MME DMKAVS GTKRKSEVL++CLQQMKACF+DAR+N+ KL EA
Sbjct: 560  GYDDMGYELWKPNLRAMMESDMKAVSMGTKRKSEVLDSCLQQMKACFVDARLNKEKLFEA 619

Query: 725  MAIFFDRSNRPGGDEQSVVGDIVRPCGACHESDMTLKQRPDGKFMVGCLGFPQCRNVVWL 546
            M +FF+RSNR  G+EQ  +G++VR CG C ESDM L+++PDG FMVGCLG+PQCRNVVWL
Sbjct: 620  MDVFFERSNRANGNEQQAIGEVVRKCGLCQESDMVLRKKPDGNFMVGCLGYPQCRNVVWL 679

Query: 545  PGSTSEAAVTTQVCNSCTPGPVFMIQLKFRQMEIPPNYDTDHLGCIGGCDETLRQLIEIC 366
            PGS SEA VTT +C++C+PGPV+MIQ KFR++EIPPNY+ DHLGCIGGCD+TLRQL+EIC
Sbjct: 680  PGSVSEATVTTTICSTCSPGPVYMIQFKFRRLEIPPNYNVDHLGCIGGCDDTLRQLVEIC 739

Query: 365  RTGSRNTVPVNAAXXXXXXXXXXXXXXXXXXXSA---CIHCRQTGHSSNDCXXXXXXXXX 195
             TGSR T  V                       A        QT   S+           
Sbjct: 740  GTGSRTTSSVPGRGQGHTSSSSSAQQSNYRDQGAWQTASSAWQTASGSHP-SQSSRGRSA 798

Query: 194  XXXXXXXXXSGETSIPCNICGTPCSVRTANTANNKGRKFYSCQIRECNFFVWEDSINN 21
                      GE+SIPC  CG  C++RTANT  NKGRKFYSCQ + C+FFVWED+IN+
Sbjct: 799  RSQRAGGAPDGESSIPCTSCGASCNLRTANTEANKGRKFYSCQAQGCSFFVWEDNINS 856


>ref|XP_004136599.1| PREDICTED: DNA topoisomerase 3-alpha-like [Cucumis sativus]
          Length = 925

 Score =  553 bits (1424), Expect = e-155
 Identities = 272/422 (64%), Positives = 310/422 (73%), Gaps = 1/422 (0%)
 Frame = -1

Query: 1265 GGETTVEIDIAGELFSASGRV-IIAKNYLDVYRFESWGGSMIPKYIFGQQFTPTTLTLDS 1089
            G  TTVEIDIAGELFS S R   I +NYLDVYRFESWGGS IP Y+ GQQF PTTLTLDS
Sbjct: 435  GAVTTVEIDIAGELFSTSKRANSILRNYLDVYRFESWGGSTIPTYVSGQQFVPTTLTLDS 494

Query: 1088 GVTRXXXXXXXXXXXSCMDKAGIGTDATMHDHIKKLLDRFYATKDANTRFSPTNLGEALV 909
            GVTR           SCMDK GIGTDATMHDHIKKLLDRFYATKDANTRF+PTNLGEALV
Sbjct: 495  GVTRPPPLLSEADLLSCMDKEGIGTDATMHDHIKKLLDRFYATKDANTRFTPTNLGEALV 554

Query: 908  MGYDDMGYELWKPYLRSMMECDMKAVSTGTKRKSEVLETCLQQMKACFLDARVNRVKLLE 729
            MGYDDMGY LWKP LR++ME +MKAVS GTKRK EVL +CLQQMK CFLDARVN+ KLLE
Sbjct: 555  MGYDDMGYNLWKPNLRAIMEHEMKAVSEGTKRKDEVLASCLQQMKTCFLDARVNKQKLLE 614

Query: 728  AMAIFFDRSNRPGGDEQSVVGDIVRPCGACHESDMTLKQRPDGKFMVGCLGFPQCRNVVW 549
            AM +FF+RSN  GGDE   VG++V+ CG C +SDM LK+  DG +MVGCLGFPQCRNVVW
Sbjct: 615  AMEVFFERSNGSGGDENRAVGEVVQLCGLCQDSDMVLKRNRDGNYMVGCLGFPQCRNVVW 674

Query: 548  LPGSTSEAAVTTQVCNSCTPGPVFMIQLKFRQMEIPPNYDTDHLGCIGGCDETLRQLIEI 369
            LPGS +EA VT+  C  CTPGPV++IQ KFRQ+EIPPNY+ +HLGC+GGCD+ LRQL EI
Sbjct: 675  LPGSIAEATVTSDRCTLCTPGPVYLIQFKFRQLEIPPNYNANHLGCVGGCDDILRQLTEI 734

Query: 368  CRTGSRNTVPVNAAXXXXXXXXXXXXXXXXXXXSACIHCRQTGHSSNDCXXXXXXXXXXX 189
            C TGSR                           S CI C+Q GHSSNDC           
Sbjct: 735  CGTGSR-------VSARGRGTSSSNVQRDNPGQSVCIFCQQVGHSSNDC----PSQSVGS 783

Query: 188  XXXXXXXSGETSIPCNICGTPCSVRTANTANNKGRKFYSCQIRECNFFVWEDSINNSTAG 9
                   SGE+S+ C+ CG+PC +RTANTANN+GRKFY CQ +ECNFFVWED+++N   G
Sbjct: 784  RSAQRRQSGESSVSCSSCGSPCVLRTANTANNRGRKFYKCQSQECNFFVWEDNVDNGNGG 843

Query: 8    SA 3
            ++
Sbjct: 844  NS 845


>gb|EPS73635.1| hypothetical protein M569_01118, partial [Genlisea aurea]
          Length = 813

 Score =  550 bits (1416), Expect = e-154
 Identities = 268/412 (65%), Positives = 302/412 (73%), Gaps = 1/412 (0%)
 Frame = -1

Query: 1265 GGETTVEIDIAGELFSASGRVIIAKNYLDVYRFESWGGSMIPKYIFGQQFTPTTLTLDSG 1086
            G ETTVEIDIA E FSASGR IIAKNYLDVYRFE WGGS+IP Y +GQQF PTTLTLDSG
Sbjct: 338  GAETTVEIDIASEQFSASGRAIIAKNYLDVYRFEKWGGSLIPAYAYGQQFIPTTLTLDSG 397

Query: 1085 VTRXXXXXXXXXXXSCMDKAGIGTDATMHDHIKKLLDRFYATKDANTRFSPTNLGEALVM 906
            VTR            CMDKAGIGTDATMHDHIKKLLDR YATKD+NTRFSPT LGEALVM
Sbjct: 398  VTRPPPLLSEADLLGCMDKAGIGTDATMHDHIKKLLDRCYATKDSNTRFSPTKLGEALVM 457

Query: 905  GYDDMGYELWKPYLRSMMECDMKAVSTGTKRKSEVLETCLQQMKACFLDARVNRVKLLEA 726
            GYDDMGYELWKP+LR+MME DMK+VS GTKRK EVLE CLQQMKACFLDAR N+ KL EA
Sbjct: 458  GYDDMGYELWKPHLRAMMESDMKSVSMGTKRKGEVLEACLQQMKACFLDARANKEKLFEA 517

Query: 725  MAIFFDRSNRPGGDEQSVVGDIVRPCGACHESDMTLKQRPDGKFMVGCLGFPQCRNVVWL 546
            M +FF+RSNR    +Q + GDIVR CG C ESDM L+++PDG FMVGCLG+PQCRNVVWL
Sbjct: 518  MGVFFERSNRSQTADQHMSGDIVRKCGLCQESDMVLRKKPDGNFMVGCLGYPQCRNVVWL 577

Query: 545  PGSTSEAAVTTQVCNSCTPGPVFMIQLKFRQMEIPPNYDTDHLGCIGGCDETLRQLIEIC 366
            PGS S A+VTT VC++C+PGPV+MIQ KFRQ+EIPPNY+ DHLGC+GGCD  LRQL+EIC
Sbjct: 578  PGSVSSASVTTVVCSTCSPGPVYMIQFKFRQLEIPPNYNVDHLGCVGGCDSVLRQLVEIC 637

Query: 365  RTGSRNTVPV-NAAXXXXXXXXXXXXXXXXXXXSACIHCRQTGHSSNDCXXXXXXXXXXX 189
             TGSR+   V                           H   TG SS              
Sbjct: 638  GTGSRSNSNVPGTGQGQTSSSSFNHPQHGNLRNRGAAHPTTTGRSS--------ARHPSP 689

Query: 188  XXXXXXXSGETSIPCNICGTPCSVRTANTANNKGRKFYSCQIRECNFFVWED 33
                   +GE+S+PC  CG PC++RTANTA N+GR+FYSCQ + CNFFVW+D
Sbjct: 690  SSTTHVGAGESSVPCGSCGAPCNLRTANTAANRGRQFYSCQAQSCNFFVWKD 741


>ref|XP_006829322.1| hypothetical protein AMTR_s00202p00033660 [Amborella trichopoda]
            gi|548834342|gb|ERM96738.1| hypothetical protein
            AMTR_s00202p00033660 [Amborella trichopoda]
          Length = 988

 Score =  531 bits (1368), Expect = e-148
 Identities = 260/421 (61%), Positives = 293/421 (69%)
 Frame = -1

Query: 1265 GGETTVEIDIAGELFSASGRVIIAKNYLDVYRFESWGGSMIPKYIFGQQFTPTTLTLDSG 1086
            G  TTVEIDIAGE+F ASG +II KNYL+VYRFESWGGS IP Y FGQQF PT LTLDS 
Sbjct: 507  GAGTTVEIDIAGEVFVASGLMIIEKNYLEVYRFESWGGSTIPTYAFGQQFIPTRLTLDSS 566

Query: 1085 VTRXXXXXXXXXXXSCMDKAGIGTDATMHDHIKKLLDRFYATKDANTRFSPTNLGEALVM 906
            VTR           SCMDKAGIGTDATMHDHIKKLLDRFYA KD+NTRFSPT LGEALVM
Sbjct: 567  VTRPPPLLSESDLLSCMDKAGIGTDATMHDHIKKLLDRFYAIKDSNTRFSPTTLGEALVM 626

Query: 905  GYDDMGYELWKPYLRSMMECDMKAVSTGTKRKSEVLETCLQQMKACFLDARVNRVKLLEA 726
            GYD MG++LWKP LRS ME DMKAVS G K KSEVL +CLQQMK CFLD + ++ KL E 
Sbjct: 627  GYDCMGWDLWKPNLRSAMESDMKAVSEGRKTKSEVLASCLQQMKDCFLDVKSHKAKLFET 686

Query: 725  MAIFFDRSNRPGGDEQSVVGDIVRPCGACHESDMTLKQRPDGKFMVGCLGFPQCRNVVWL 546
            M IFF+RSN PGGD   + G  VR C  C ES+M L++RPDG FMVGCL FP CRNVVWL
Sbjct: 687  MGIFFERSNTPGGDNLHLAGGKVRSCQQCQESEMVLRRRPDGSFMVGCLRFPLCRNVVWL 746

Query: 545  PGSTSEAAVTTQVCNSCTPGPVFMIQLKFRQMEIPPNYDTDHLGCIGGCDETLRQLIEIC 366
            PG+ SEA VT  VCN C P PVF IQ KFR+MEIPPN+DT+HLGCIGGCDETLR+LI+IC
Sbjct: 747  PGAISEALVTEHVCNVCNPEPVFKIQFKFRRMEIPPNFDTEHLGCIGGCDETLRELIQIC 806

Query: 365  RTGSRNTVPVNAAXXXXXXXXXXXXXXXXXXXSACIHCRQTGHSSNDCXXXXXXXXXXXX 186
             TG RN    +                       C  CRQ+GHSSNDC            
Sbjct: 807  GTGPRNLSSGSGTRGRQPTQFSGSAQRRNTSQVVCARCRQSGHSSNDCPQISRSQDAQRP 866

Query: 185  XXXXXXSGETSIPCNICGTPCSVRTANTANNKGRKFYSCQIRECNFFVWEDSINNSTAGS 6
                  SG   + C  C  PC+VRTANT NN+GR+FY C  +ECNFF+WED+I +   G+
Sbjct: 867  GHGNSNSGGADVLCESCQMPCTVRTANTENNRGRRFYKCDRQECNFFIWEDAIGSGNRGA 926

Query: 5    A 3
            +
Sbjct: 927  S 927


>ref|XP_002864876.1| hypothetical protein ARALYDRAFT_496584 [Arabidopsis lyrata subsp.
            lyrata] gi|297310711|gb|EFH41135.1| hypothetical protein
            ARALYDRAFT_496584 [Arabidopsis lyrata subsp. lyrata]
          Length = 923

 Score =  526 bits (1355), Expect = e-147
 Identities = 260/425 (61%), Positives = 302/425 (71%), Gaps = 7/425 (1%)
 Frame = -1

Query: 1259 ETTVEIDIAGELFSASGRVIIAKNYLDVYRFESWGGSMIPKYIFGQQFTPTTLTLDSGVT 1080
            ETTVEIDIAGE FSASGR I+AKNYL+VYRFESWGGS+IP Y  GQQF PTTLTLDS VT
Sbjct: 439  ETTVEIDIAGERFSASGRAILAKNYLEVYRFESWGGSVIPVYEKGQQFIPTTLTLDSAVT 498

Query: 1079 RXXXXXXXXXXXSCMDKAGIGTDATMHDHIKKLLDRFYATKDANTRFSPTNLGEALVMGY 900
            R           SCMDKAGIGTDATMHDHIKKLLDR YATKDANTRFSPTNLGEALVMGY
Sbjct: 499  RPPPLLCEADLLSCMDKAGIGTDATMHDHIKKLLDRGYATKDANTRFSPTNLGEALVMGY 558

Query: 899  DDMGYELWKPYLRSMMECDMKAVSTGTKRKSEVLETCLQQMKACFLDARVNRVKLLEAMA 720
            DDMGYELWKP LR++ME DM  VS G K K+EVLETCLQQMKACFLDARV + KLLEAM 
Sbjct: 559  DDMGYELWKPNLRALMERDMNEVSVGRKTKAEVLETCLQQMKACFLDARVKKSKLLEAMT 618

Query: 719  IFFDRSNRPGGDEQSVVGDIVRPCGACHESDMTLKQRPDGKFMVGCLGFPQCRNVVWLPG 540
            IFF+RSN     E    G+++R C  C+ESDM L++  DG FMVGC+ +PQCRN VWLPG
Sbjct: 619  IFFERSNNTDESESQTAGEVIRRCNLCNESDMALRKNRDGNFMVGCMNYPQCRNAVWLPG 678

Query: 539  STSEAAVTTQVCNSCTPGPVFMIQLKFRQMEIPPNYDTDHLGCIGGCDETLRQLIEICRT 360
             T EA+VTT VC +C PGPV+ I  KFRQ+ IPP +D +HLGCIGGCD+ L+QLI+IC T
Sbjct: 679  PTLEASVTTDVCQTCGPGPVYKILFKFRQIGIPPGFDVNHLGCIGGCDDILKQLIDICGT 738

Query: 359  GSRN-------TVPVNAAXXXXXXXXXXXXXXXXXXXSACIHCRQTGHSSNDCXXXXXXX 201
            GSR+       TVP N                     + CIHC+Q GH+S +C       
Sbjct: 739  GSRSQARRAPGTVPSN-----------NIQGSNTRQGNFCIHCQQRGHASANCPSRATAF 787

Query: 200  XXXXXXXXXXXSGETSIPCNICGTPCSVRTANTANNKGRKFYSCQIRECNFFVWEDSINN 21
                       + E+++ CN CGT C +RTANT  N+GR+F+SC  + C+FF WEDSINN
Sbjct: 788  RNSRLTATNPRNDESTVSCNTCGTQCVLRTANTEANRGRQFFSCPTQGCSFFAWEDSINN 847

Query: 20   STAGS 6
            S+  +
Sbjct: 848  SSGNA 852


>ref|NP_201197.1| topoisomerase 3alpha [Arabidopsis thaliana]
            gi|8777305|dbj|BAA96895.1| DNA topoisomerase III
            [Arabidopsis thaliana] gi|169218912|gb|ACA50279.1|
            topoisomerase 3 alpha [Arabidopsis thaliana]
            gi|332010433|gb|AED97816.1| topoisomerase 3alpha
            [Arabidopsis thaliana]
          Length = 926

 Score =  526 bits (1354), Expect = e-146
 Identities = 256/418 (61%), Positives = 299/418 (71%)
 Frame = -1

Query: 1259 ETTVEIDIAGELFSASGRVIIAKNYLDVYRFESWGGSMIPKYIFGQQFTPTTLTLDSGVT 1080
            ETTVEIDIAGE FSASGR I+AKNYL+VYRFESWGGS+IP Y  GQQF PTTLTLD+ VT
Sbjct: 439  ETTVEIDIAGERFSASGRAILAKNYLEVYRFESWGGSVIPVYEKGQQFIPTTLTLDAAVT 498

Query: 1079 RXXXXXXXXXXXSCMDKAGIGTDATMHDHIKKLLDRFYATKDANTRFSPTNLGEALVMGY 900
            R           SCMDKAGIGTDATMHDHIKKLLDR YATKDANTRFSPTNLGEALVMGY
Sbjct: 499  RPPPLLCEADLLSCMDKAGIGTDATMHDHIKKLLDRGYATKDANTRFSPTNLGEALVMGY 558

Query: 899  DDMGYELWKPYLRSMMECDMKAVSTGTKRKSEVLETCLQQMKACFLDARVNRVKLLEAMA 720
            DDMGYELWKP LR++ME DM  VS G K K+EVLETCLQQMKACFLDARV + KLLEAM 
Sbjct: 559  DDMGYELWKPNLRALMEHDMNEVSVGRKTKAEVLETCLQQMKACFLDARVKKSKLLEAMT 618

Query: 719  IFFDRSNRPGGDEQSVVGDIVRPCGACHESDMTLKQRPDGKFMVGCLGFPQCRNVVWLPG 540
            IFF+RSN     E    G++VR C  C+ESDM L++  DG FMVGC+ +PQCRN VWLPG
Sbjct: 619  IFFERSNNTDESESQTAGEVVRRCNLCNESDMALRKNRDGNFMVGCMNYPQCRNAVWLPG 678

Query: 539  STSEAAVTTQVCNSCTPGPVFMIQLKFRQMEIPPNYDTDHLGCIGGCDETLRQLIEICRT 360
             T EA+VTT VC SC PGPV+ I  KFRQ+ IPP +D +HLGC+GGCD+ L+QLI+IC T
Sbjct: 679  PTLEASVTTNVCQSCGPGPVYKILFKFRQIGIPPGFDVNHLGCVGGCDDILKQLIDICGT 738

Query: 359  GSRNTVPVNAAXXXXXXXXXXXXXXXXXXXSACIHCRQTGHSSNDCXXXXXXXXXXXXXX 180
            GSR+     A                    + CIHC+Q GH+S +C              
Sbjct: 739  GSRS----QARRTPGTAPSNNIQGSNTRQSNVCIHCQQRGHASTNCPSRVPASRNSRPTA 794

Query: 179  XXXXSGETSIPCNICGTPCSVRTANTANNKGRKFYSCQIRECNFFVWEDSINNSTAGS 6
                + E+++ CN CG+ C +RTANT  N+GR+F+SC  + C+FF WEDSINNS+  +
Sbjct: 795  TNPRNDESTVSCNTCGSQCVLRTANTEANRGRQFFSCPTQGCSFFAWEDSINNSSGNA 852


>ref|XP_006394227.1| hypothetical protein EUTSA_v10003618mg [Eutrema salsugineum]
            gi|557090866|gb|ESQ31513.1| hypothetical protein
            EUTSA_v10003618mg [Eutrema salsugineum]
          Length = 930

 Score =  526 bits (1354), Expect = e-146
 Identities = 260/423 (61%), Positives = 301/423 (71%), Gaps = 5/423 (1%)
 Frame = -1

Query: 1259 ETTVEIDIAGELFSASGRVIIAKNYLDVYRFESWGGSMIPKYIFGQQFTPTTLTLDSGVT 1080
            ETTVEIDIAGE FSASGR I+AKNYL+VYRFESWGGS+IP Y  GQQF PT LTLDS VT
Sbjct: 440  ETTVEIDIAGERFSASGRAILAKNYLEVYRFESWGGSVIPVYEKGQQFIPTRLTLDSAVT 499

Query: 1079 RXXXXXXXXXXXSCMDKAGIGTDATMHDHIKKLLDRFYATKDANTRFSPTNLGEALVMGY 900
            R           SCMDKAGIGTDATMHDHIKKLLDR YATKDANTRFSPTNLGEALVMGY
Sbjct: 500  RPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRGYATKDANTRFSPTNLGEALVMGY 559

Query: 899  DDMGYELWKPYLRSMMECDMKAVSTGTKRKSEVLETCLQQMKACFLDARVNRVKLLEAMA 720
            DDMGYELWKP LR++ME DM  VS G+K K+EVL+TCLQQMKACFLDARV + KLLE M 
Sbjct: 560  DDMGYELWKPNLRAIMEHDMNEVSVGSKTKAEVLQTCLQQMKACFLDARVKKAKLLETMT 619

Query: 719  IFFDRSNRPGGDEQSVVGDIVRPCGACHESDMTLKQRPDGKFMVGCLGFPQCRNVVWLPG 540
            IFF+RSN     E    G++VR C  CHESDM L++  DG FMVGC+ +PQCRN VWLPG
Sbjct: 620  IFFERSNNTDEGENQTAGEVVRRCNLCHESDMALRKNRDGNFMVGCMSYPQCRNAVWLPG 679

Query: 539  STSEAAVTTQVCNSCTPGPVFMIQLKFRQMEIPPNYDTDHLGCIGGCDETLRQLIEICRT 360
             T EA+VT  VC SC P PV+ I+ KFRQ+ IPP +DT+HLGC+GGCD+ L+QLI+IC T
Sbjct: 680  PTLEASVTADVCQSCGPAPVYKIRFKFRQIGIPPGFDTNHLGCVGGCDDILKQLIDICGT 739

Query: 359  GSRNTVPVNAAXXXXXXXXXXXXXXXXXXXSACIHCRQTGHSSNDCXXXXXXXXXXXXXX 180
            GSR     + A                   + CIHC+Q GH+S +C              
Sbjct: 740  GSR-----SQARTAPGASSNNFQGGNIRQNNTCIHCQQRGHTSANCPSRISGSRNPRPTT 794

Query: 179  XXXXSG-ETSIPCNICGTPCSVRTANTANNKGRKFYSCQIRECNFFVWEDSIN----NST 15
                   ET++ CN CGTPC++RTANT  N+GR+F+SC  + CNFF WEDSI+    N+T
Sbjct: 795  GTNPGNDETTVSCNTCGTPCALRTANTEANRGRRFFSCPSQGCNFFAWEDSISNGSGNAT 854

Query: 14   AGS 6
            AGS
Sbjct: 855  AGS 857


>ref|XP_006279975.1| hypothetical protein CARUB_v10025845mg [Capsella rubella]
            gi|482548679|gb|EOA12873.1| hypothetical protein
            CARUB_v10025845mg [Capsella rubella]
          Length = 919

 Score =  519 bits (1337), Expect = e-145
 Identities = 256/425 (60%), Positives = 301/425 (70%), Gaps = 7/425 (1%)
 Frame = -1

Query: 1259 ETTVEIDIAGELFSASGRVIIAKNYLDVYRFESWGGSMIPKYIFGQQFTPTTLTLDSGVT 1080
            ETTVEIDI+GE FSASGR I+AKNYL+VYRFESWGGS+IP Y  GQQF PT+LTLDS VT
Sbjct: 439  ETTVEIDISGERFSASGRAILAKNYLEVYRFESWGGSVIPVYEKGQQFIPTSLTLDSAVT 498

Query: 1079 RXXXXXXXXXXXSCMDKAGIGTDATMHDHIKKLLDRFYATKDANTRFSPTNLGEALVMGY 900
            R           SCMDKAGIGTDATMHDHIKKLLDR YATKDANTRFSPTNLGEALVMGY
Sbjct: 499  RPPPLLCEADLLSCMDKAGIGTDATMHDHIKKLLDRGYATKDANTRFSPTNLGEALVMGY 558

Query: 899  DDMGYELWKPYLRSMMECDMKAVSTGTKRKSEVLETCLQQMKACFLDARVNRVKLLEAMA 720
            DDMGYELWKP LR++ME DM  VS G K K+EVLETCLQQMKACFLDARV + KLLEAM 
Sbjct: 559  DDMGYELWKPNLRAIMEHDMNEVSVGRKTKAEVLETCLQQMKACFLDARVKKSKLLEAMT 618

Query: 719  IFFDRSNRPGGDEQSVVGDIVRPCGACHESDMTLKQRPDGKFMVGCLGFPQCRNVVWLPG 540
            IFF+RSN     E    G++VR C  C+ESDM L++  DG FMVGC+ +PQCRN VWLPG
Sbjct: 619  IFFERSNNTDEGENQTAGEVVRRCNLCNESDMALRKNRDGNFMVGCMNYPQCRNAVWLPG 678

Query: 539  STSEAAVTTQVCNSCTPGPVFMIQLKFRQMEIPPNYDTDHLGCIGGCDETLRQLIEICRT 360
             T EA+VTT VC SC PGPV+ I  KFRQ+ IPP ++ +HLGC+GGCD  L+QLI+IC T
Sbjct: 679  PTLEASVTTNVCQSCGPGPVYKILFKFRQIGIPPGFEVNHLGCVGGCDGILKQLIDICGT 738

Query: 359  GSR-------NTVPVNAAXXXXXXXXXXXXXXXXXXXSACIHCRQTGHSSNDCXXXXXXX 201
            GSR       +TVP N                     + CIHC+Q GH+S++C       
Sbjct: 739  GSRSQARRAPDTVPPN-----------NIRGSNTRQSNVCIHCQQRGHASSNCPSRVSAS 787

Query: 200  XXXXXXXXXXXSGETSIPCNICGTPCSVRTANTANNKGRKFYSCQIRECNFFVWEDSINN 21
                       + E+++ CN CGT C +RTANT  N+GR+F+SC  + C+FF WED I+N
Sbjct: 788  RNSRPTGTNPRNDESTVSCNTCGTQCVLRTANTEANRGRQFFSCPTQGCSFFAWEDGISN 847

Query: 20   STAGS 6
            S+  +
Sbjct: 848  SSGNA 852


>ref|XP_006581778.1| PREDICTED: DNA topoisomerase 3-alpha isoform X4 [Glycine max]
          Length = 885

 Score =  512 bits (1318), Expect = e-142
 Identities = 259/423 (61%), Positives = 298/423 (70%), Gaps = 4/423 (0%)
 Frame = -1

Query: 1265 GGETTVEIDIAGELFSASGRVIIAKNYLDVYRFESWGGSMIPKYIFGQQFTPTTLTLDSG 1086
            G ETTVEI+IAGELFSA GRVI+ KNYLDVYR+ESWGGSMIP Y  GQQF PT LTL+SG
Sbjct: 402  GAETTVEINIAGELFSACGRVILEKNYLDVYRYESWGGSMIPTYTNGQQFNPTKLTLESG 461

Query: 1085 VTRXXXXXXXXXXXSCMDK--AGIGTDATMHDHIKKLLDRFYATKDANTRFSPTNLGEAL 912
            VTR           S MD+  A IGTDATM DHIKK+LDR YATKD++TRF+PTNLGEAL
Sbjct: 462  VTRPPPLLSEADLLSYMDREEAKIGTDATMQDHIKKMLDRSYATKDSSTRFTPTNLGEAL 521

Query: 911  VMGYDD--MGYELWKPYLRSMMECDMKAVSTGTKRKSEVLETCLQQMKACFLDARVNRVK 738
            V+GYDD  M Y+LWKP LRS ME  M  V  G K K+EVL T LQ+M+ACFL+AR+N+VK
Sbjct: 522  VLGYDDIDMTYKLWKPDLRSEMEKKMDDVKKGDKSKAEVLVTILQKMEACFLEARLNKVK 581

Query: 737  LLEAMAIFFDRSNRPGGDEQSVVGDIVRPCGACHESDMTLKQRPDGKFMVGCLGFPQCRN 558
            LLEAMAIFF+RS R   DE    G++VR CG C ESDM L++  DG FMVGC+G+PQCRN
Sbjct: 582  LLEAMAIFFERSTRSSSDELHATGEVVRRCGLCQESDMLLRKNRDGNFMVGCMGYPQCRN 641

Query: 557  VVWLPGSTSEAAVTTQVCNSCTPGPVFMIQLKFRQMEIPPNYDTDHLGCIGGCDETLRQL 378
             VWLPGS SEA VTT  CN CTPGPV++IQ KFR++EIPPNY  +HLGCIGGCDE L QL
Sbjct: 642  AVWLPGSVSEAVVTTNTCNFCTPGPVYLIQFKFRRLEIPPNYSPNHLGCIGGCDEILAQL 701

Query: 377  IEICRTGSRNTVPVNAAXXXXXXXXXXXXXXXXXXXSACIHCRQTGHSSNDCXXXXXXXX 198
             EIC  G     P   A                    AC++CR+TGHSS DC        
Sbjct: 702  TEICGRG-----PRMPARPRGPTAPTSNAHHTNPRQGACMNCRETGHSSTDC---PLRYG 753

Query: 197  XXXXXXXXXXSGETSIPCNICGTPCSVRTANTANNKGRKFYSCQIRECNFFVWEDSINNS 18
                      +GE S+ C+ CGTPC +RTANT NN+GRKFYSCQ +ECNFFVWEDS+N  
Sbjct: 754  NVQHHGTSEHNGEASVSCSSCGTPCVLRTANTVNNRGRKFYSCQSQECNFFVWEDSLNAG 813

Query: 17   TAG 9
            T G
Sbjct: 814  TGG 816