BLASTX nr result
ID: Akebia26_contig00026652
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia26_contig00026652
(753 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004149623.1| PREDICTED: uncharacterized protein LOC101211... 186 8e-45
gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hop... 169 7e-40
emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera] 164 4e-38
gb|AAG10817.1|AC011808_5 Putative retroelement polyprotein [Arab... 163 5e-38
gb|AAF79879.1|AC000348_32 T7N9.5 [Arabidopsis thaliana] 162 9e-38
emb|CAN74229.1| hypothetical protein VITISV_000584 [Vitis vinifera] 162 9e-38
dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis t... 158 2e-36
emb|CAN65820.1| hypothetical protein VITISV_042324 [Vitis vinifera] 157 4e-36
emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera] 157 5e-36
emb|CAB10526.1| retrotransposon like protein [Arabidopsis thalia... 157 5e-36
gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsi... 156 8e-36
gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsi... 155 2e-35
emb|CAN82526.1| hypothetical protein VITISV_028058 [Vitis vinifera] 153 5e-35
emb|CAB10225.1| retrovirus-related like polyprotein [Arabidopsis... 151 2e-34
emb|CAN73437.1| hypothetical protein VITISV_031733 [Vitis vinifera] 151 3e-34
gb|AAD41979.1| putative retroelement pol polyprotein [Arabidopsi... 150 5e-34
gb|AAC33963.1| contains similarity to reverse transcriptases (Pf... 149 8e-34
gb|ACB45081.1| putative polyprotein [Solanum habrochaites] 149 8e-34
emb|CAN65808.1| hypothetical protein VITISV_033389 [Vitis vinifera] 149 8e-34
emb|CAA72989.1| unnamed protein product [Brassica oleracea var. ... 149 1e-33
>ref|XP_004149623.1| PREDICTED: uncharacterized protein LOC101211618 [Cucumis sativus]
Length = 2085
Score = 186 bits (472), Expect = 8e-45
Identities = 106/267 (39%), Positives = 142/267 (53%), Gaps = 16/267 (5%)
Frame = -1
Query: 753 HLLNVARALFFQSRVPIKFWGECVFTAIYLINRIPSPLLQNKAHFQLLYNSPVDYGFLRV 574
HLLNVARAL FQS+VP+ FWGECV +A YLINR P LL N F L+ DY ++
Sbjct: 534 HLLNVARALMFQSKVPLIFWGECVLSAAYLINRTPMVLLSNNTPFAALFKKKADYNIIKT 593
Query: 573 FGSLCYASTLLFHRHKFYPRATVCVFVGYTPGIKGYKLYDIVTKSFFHSRDVVFHENLFP 394
FG L YAST +R KF PRA CVF+G+ PGIKGY+LYDI + FF SRDV+F E LFP
Sbjct: 594 FGCLAYASTPSVNRSKFDPRAQPCVFMGFPPGIKGYRLYDIAKRKFFISRDVLFFEELFP 653
Query: 393 FHS-----IPHSNDLIDPFLXXXXXXXXXXXXXXXXPSINNSAPFVSPLPSE-------- 253
FHS IP S+D ++ F+ ++ P P +
Sbjct: 654 FHSIKEKDIPISHDFLEQFVIPCPLFDCLEKEDSI-----DARPTTEDSPEDSHGVDDQD 708
Query: 252 -HIAHNTPTQLILQ--XXXXXXXXXXXXXXXSYLRDFHCNLFSNNPSHTSNSPYTIENYI 82
HI+++ T Q SYL+DF+CNL S N ++P+ + Y+
Sbjct: 709 PHISNSGETSNTDQEPIPIMTRKSSRPHHPPSYLKDFYCNLTSQN-----STPFPLNQYL 763
Query: 81 FYANFSPSYSNYLLTISFTYESQFYHE 1
Y +S + NY+ ++ YE +YH+
Sbjct: 764 SYNAYSQHHKNYMFNVTSIYEPTYYHQ 790
>gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hopscotch polyprotein
(gb|U12626) [Arabidopsis thaliana]
Length = 1315
Score = 169 bits (429), Expect = 7e-40
Identities = 94/251 (37%), Positives = 134/251 (53%)
Frame = -1
Query: 753 HLLNVARALFFQSRVPIKFWGECVFTAIYLINRIPSPLLQNKAHFQLLYNSPVDYGFLRV 574
H+LNVAR+LFFQS +PI +WG+C+ TA+YLINR+P+P+L++K F++L + Y ++V
Sbjct: 570 HILNVARSLFFQSHIPISYWGDCILTAVYLINRLPAPILEDKCPFEVLTKTVPTYDHIKV 629
Query: 573 FGSLCYASTLLFHRHKFYPRATVCVFVGYTPGIKGYKLYDIVTKSFFHSRDVVFHENLFP 394
FG LCYAST RHKF PRA C F+GY G KGYKL D+ T S SR VVFHE LFP
Sbjct: 630 FGCLCYASTSPKDRHKFSPRAKACAFIGYPSGFKGYKLLDLETHSIIVSRHVVFHEELFP 689
Query: 393 FHSIPHSNDLIDPFLXXXXXXXXXXXXXXXXPSINNSAPFVSPLPSEHIAHNTPTQLILQ 214
F S + F + ++S+ V LPS + +N P +
Sbjct: 690 FLGSDLSQE-EQNFFPDLNPTPPMQRQSSDHVNPSDSSSSVEILPSANPTNNVPEPSV-- 746
Query: 213 XXXXXXXXXXXXXXXSYLRDFHCNLFSNNPSHTSNSPYTIENYIFYANFSPSYSNYLLTI 34
+YL+D++C+ S S++P+ I ++ Y + Y +L +
Sbjct: 747 -----QTSHRKAKKPAYLQDYYCH------SVVSSTPHEIRKFLSYDRINDPYLTFLACL 795
Query: 33 SFTYESQFYHE 1
T E Y E
Sbjct: 796 DKTKEPSNYTE 806
>emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera]
Length = 1461
Score = 164 bits (414), Expect = 4e-38
Identities = 99/257 (38%), Positives = 131/257 (50%), Gaps = 6/257 (2%)
Frame = -1
Query: 753 HLLNVARALFFQSRVPIKFWGECVFTAIYLINRIPSPLLQNKAHFQLLYNSPVDYGFLRV 574
HLLNV RAL FQ+ +P+KFWGE + TA YLINR+P+PLL +K+ +QLL N Y LR
Sbjct: 701 HLLNVGRALRFQANLPLKFWGESIQTACYLINRLPTPLLSHKSPYQLLXNKLPSYHHLRT 760
Query: 573 FGSLCYASTLLFHRHKFYPRATVCVFVGYTPGIKGYKLYDIVTKSFFHSRDVVFHENLFP 394
FG LCYA+ LL HKF RA C+FVGY G KGY++YD+ T FF S DVVFHE++FP
Sbjct: 761 FGCLCYATNLL-PTHKFDQRARRCIFVGYPLGQKGYRVYDLXTNKFFSSXDVVFHEHIFP 819
Query: 393 FHSIPHSNDLIDPFLXXXXXXXXXXXXXXXXPSINNS-APFVSPLPSEHIAHNTPTQLIL 217
FH+ P L P ++ P +S L S I+
Sbjct: 820 FHTNPQEEQHDVVVLPLPQTSYEPITTETTKPQADDQPPPLLSSLESTSNERTLXLDTIV 879
Query: 216 Q-XXXXXXXXXXXXXXXSYLRDFH----CNLFSNNPSHTSNSPYTIENYIFYANFSPSYS 52
+LR+FH + S+ S S + + + YI YA SP Y
Sbjct: 880 SPPPPTTRRSDRIKQPNVHLRNFHLYHTAKVASSQSSSLSGTRHPLTRYISYAQLSPKYR 939
Query: 51 NYLLTISFTYESQFYHE 1
N++ I+ E Y +
Sbjct: 940 NFVCAITTLVEPTTYEQ 956
>gb|AAG10817.1|AC011808_5 Putative retroelement polyprotein [Arabidopsis thaliana]
Length = 1413
Score = 163 bits (413), Expect = 5e-38
Identities = 94/250 (37%), Positives = 133/250 (53%), Gaps = 1/250 (0%)
Frame = -1
Query: 753 HLLNVARALFFQSRVPIKFWGECVFTAIYLINRIPSPLLQNKAHFQLLYNSPVDYGFLRV 574
H+LNVARAL FQS++P+ +WG+C+ TA+++INR PSP++ NK F++L DY L+
Sbjct: 697 HILNVARALLFQSQIPLSYWGDCILTAVFIINRTPSPVISNKTLFEMLTKKVPDYTHLKS 756
Query: 573 FGSLCYASTLLFHRHKFYPRATVCVFVGYTPGIKGYKLYDIVTKSFFHSRDVVFHENLFP 394
FG LCYAST RHKF RA C F+GY G KGYKL D+ + + F SR+VVF+E+LFP
Sbjct: 757 FGCLCYASTSPKQRHKFEDRARTCAFLGYPSGYKGYKLLDLESHTIFISRNVVFYEDLFP 816
Query: 393 FHSIPHSNDLIDPFLXXXXXXXXXXXXXXXXPSINNSAPFVSPLP-SEHIAHNTPTQLIL 217
F + P N+ F N+S P PLP E A N P +
Sbjct: 817 FKTKPAENEESSVFFPHIYVDR------------NDSHP-SQPLPVQETSASNVPAE--- 860
Query: 216 QXXXXXXXXXXXXXXXSYLRDFHCNLFSNNPSHTSNSPYTIENYIFYANFSPSYSNYLLT 37
+YL+D+HCN S TS++ + I + Y++ S Y ++
Sbjct: 861 ------KQNSRVSRPPAYLKDYHCN------SVTSSTDHPISEVLSYSSLSDPYMIFINA 908
Query: 36 ISFTYESQFY 7
++ E Y
Sbjct: 909 VNKIPEPHTY 918
>gb|AAF79879.1|AC000348_32 T7N9.5 [Arabidopsis thaliana]
Length = 1436
Score = 162 bits (411), Expect = 9e-38
Identities = 96/251 (38%), Positives = 131/251 (52%)
Frame = -1
Query: 753 HLLNVARALFFQSRVPIKFWGECVFTAIYLINRIPSPLLQNKAHFQLLYNSPVDYGFLRV 574
HLLNVARAL FQS +P+++WG+CV TA++LINR+ SP++ N+ ++ L DY L+
Sbjct: 722 HLLNVARALMFQSGIPLEYWGDCVLTAVFLINRLLSPVINNETPYERLTKGKPDYSSLKA 781
Query: 573 FGSLCYASTLLFHRHKFYPRATVCVFVGYTPGIKGYKLYDIVTKSFFHSRDVVFHENLFP 394
FG LCY ST R KF PRA C+F+GY G KGYKL DI T S SR V+F+E++FP
Sbjct: 782 FGCLCYCSTSPKSRTKFDPRAKACIFLGYPMGYKGYKLLDIETYSVSISRHVIFYEDIFP 841
Query: 393 FHSIPHSNDLIDPFLXXXXXXXXXXXXXXXXPSINNSAPFVSPLPSEHIAHNTPTQLILQ 214
F S ++ D F P+ NN S HN +
Sbjct: 842 FASSNITDAAKDFF------------PHIYLPAPNNDEHLPLVQSSSDAPHNHDESSSMI 889
Query: 213 XXXXXXXXXXXXXXXSYLRDFHCNLFSNNPSHTSNSPYTIENYIFYANFSPSYSNYLLTI 34
S+L+DFHC ++N P+ T SPY + NYI Y+ S + ++ I
Sbjct: 890 FVPSEPKSTRQRKLPSHLQDFHC--YNNTPTTTKTSPYPLTNYISYSYLSEPFGAFINII 947
Query: 33 SFTYESQFYHE 1
+ T Q Y E
Sbjct: 948 TATKLPQKYSE 958
>emb|CAN74229.1| hypothetical protein VITISV_000584 [Vitis vinifera]
Length = 1039
Score = 162 bits (411), Expect = 9e-38
Identities = 99/257 (38%), Positives = 130/257 (50%), Gaps = 6/257 (2%)
Frame = -1
Query: 753 HLLNVARALFFQSRVPIKFWGECVFTAIYLINRIPSPLLQNKAHFQLLYNSPVDYGFLRV 574
HLLNV RAL FQ+ +P+KFWGE + TA YLINR+P+PLL +K+ +QLL N Y LR
Sbjct: 293 HLLNVGRALRFQANLPLKFWGESIQTACYLINRLPTPLLSHKSPYQLLXNKLPSYHHLRT 352
Query: 573 FGSLCYASTLLFHRHKFYPRATVCVFVGYTPGIKGYKLYDIVTKSFFHSRDVVFHENLFP 394
FG LCYA+ LL HKF RA C+FVGY G KGY++YD+ T FF S DVVFHE++FP
Sbjct: 353 FGCLCYATNLL-PTHKFDQRARRCIFVGYPLGQKGYRVYDLETNKFFSSXDVVFHEHIFP 411
Query: 393 FHSIPHSNDLIDPFLXXXXXXXXXXXXXXXXPSINNS-APFVSPLPSEHIAHNTPTQLIL 217
FH+ P L P ++ P +S L S I+
Sbjct: 412 FHTNPQEEQHDVVVLPLPQTSYEPITTETTKPQADDQPPPLLSSLESTSNERTLDLDTIV 471
Query: 216 Q-XXXXXXXXXXXXXXXSYLRDFH----CNLFSNNPSHTSNSPYTIENYIFYANFSPSYS 52
LR+FH + S+ S S + + + YI YA SP Y
Sbjct: 472 SPPPPATRRSDRIKQPNVXLRNFHLYHTAKVXSSQSSSLSGTRHPLTRYISYAQLSPKYR 531
Query: 51 NYLLTISFTYESQFYHE 1
N++ I+ E Y +
Sbjct: 532 NFVCAITTLVEPTTYEQ 548
>dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1475
Score = 158 bits (399), Expect = 2e-36
Identities = 94/245 (38%), Positives = 127/245 (51%), Gaps = 4/245 (1%)
Frame = -1
Query: 753 HLLNVARALFFQSRVPIKFWGECVFTAIYLINRIPSPLLQNKAHFQLLYNSPVDYGFLRV 574
H+LNVARAL F++ +P++FWG+C+ +A++LINR+P+PLL NK+ F+LL+ DY L+V
Sbjct: 749 HILNVARALMFEANMPLEFWGDCILSAVFLINRLPTPLLSNKSPFELLHLKVPDYTSLKV 808
Query: 573 FGSLCYASTLLFHRHKFYPRATVCVFVGYTPGIKGYKLYDIVTKSFFHSRDVVFHENLFP 394
FG LCY ST RHKF PRA CVF+GY G KGYKL D+ T + SR VVF+E +FP
Sbjct: 809 FGCLCYESTSPQQRHKFAPRARACVFLGYPSGYKGYKLLDLETNTIHISRHVVFYETVFP 868
Query: 393 FHS---IPHS-NDLIDPFLXXXXXXXXXXXXXXXXPSINNSAPFVSPLPSEHIAHNTPTQ 226
F IP DL+DP PS + SAP VS
Sbjct: 869 FTDKTIIPRDVFDLVDP----------VHENIENPPSTSESAPKVSSKRESR-------- 910
Query: 225 LILQXXXXXXXXXXXXXXXSYLRDFHCNLFSNNPSHTSNSPYTIENYIFYANFSPSYSNY 46
YL+D+ CN P T + Y + YI Y S ++ Y
Sbjct: 911 -----------------PPGYLQDYFCNAV---PDVTKDVRYPLNAYINYTQLSEEFTAY 950
Query: 45 LLTIS 31
+ ++
Sbjct: 951 ICAVN 955
>emb|CAN65820.1| hypothetical protein VITISV_042324 [Vitis vinifera]
Length = 1262
Score = 157 bits (397), Expect = 4e-36
Identities = 94/262 (35%), Positives = 142/262 (54%), Gaps = 11/262 (4%)
Frame = -1
Query: 753 HLLNVARALFFQSRVPIKFWGECVFTAIYLINRIPSPLLQNKAHFQLLYNSPVDYGFLRV 574
HLLNVAR+L FQS++P+ +W +CV T +LINR PS +L N+ +QLL+ P +Y + +
Sbjct: 670 HLLNVARSLMFQSKLPLSYWTDCVLTXTHLINRTPSSILNNQTPYQLLFQKPPNYNYFKX 729
Query: 573 FGSLCYASTLLFHRHKFYPRATVCVFVGYTPGIKGYKLYDIVTKSFFHSRDVVFHENLFP 394
FG LC+AST+ +R KF PRAT C+F+GY P IKGYK+ D+ T F SR+V+FHE+ FP
Sbjct: 730 FGCLCFASTITNNRGKFQPRATKCIFLGYPPNIKGYKVLDLTTXKXFVSRNVJFHESTFP 789
Query: 393 FHSIPHSNDLIDPFLXXXXXXXXXXXXXXXXPSIN-NSAPFVSPLPSEHIAHNTPTQLI- 220
SIP + + PF+ S++ S S P+ I + P I
Sbjct: 790 --SIP--DTIHKPFVFXDFPQIYESKSCKPNNSVSITSGSTNSTDPTSXIESSIPENTIH 845
Query: 219 -LQXXXXXXXXXXXXXXXSYLRDFHC------NLFSNNPSHTSNS--PYTIENYIFYANF 67
YL++++C +L + PS S+S PY I +++ +
Sbjct: 846 ANNDANSLRRSERTKHLPKYLQNYYCGNMTKIDLATQAPSSCSSSGKPYYIFSFLSDSKL 905
Query: 66 SPSYSNYLLTISFTYESQFYHE 1
S + ++ IS T+E + Y +
Sbjct: 906 SSKHKAFISIISSTFEPKTYKQ 927
>emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]
Length = 1813
Score = 157 bits (396), Expect = 5e-36
Identities = 76/135 (56%), Positives = 95/135 (70%)
Frame = -1
Query: 753 HLLNVARALFFQSRVPIKFWGECVFTAIYLINRIPSPLLQNKAHFQLLYNSPVDYGFLRV 574
H+LNVAR+L FQS VP++FWGECV TA+YLINRIP+PLL NK+ F++LYN P LRV
Sbjct: 932 HILNVARSLMFQSNVPLEFWGECVLTAVYLINRIPTPLLSNKSPFEVLYNRPPSLTHLRV 991
Query: 573 FGSLCYASTLLFHRHKFYPRATVCVFVGYTPGIKGYKLYDIVTKSFFHSRDVVFHENLFP 394
FG CY T + + KF PRA++CVF+GY G KGYK+ D+ T+ SRDV F EN+FP
Sbjct: 992 FGCECYV-TNVHPKQKFDPRASICVFLGYPHGKKGYKVLDLQTQKISVSRDVFFRENIFP 1050
Query: 393 FHSIPHSNDLIDPFL 349
FHS + P L
Sbjct: 1051 FHSSSSQSQQHSPSL 1065
>emb|CAB10526.1| retrotransposon like protein [Arabidopsis thaliana]
gi|7268497|emb|CAB78748.1| retrotransposon like protein
[Arabidopsis thaliana]
Length = 1433
Score = 157 bits (396), Expect = 5e-36
Identities = 74/134 (55%), Positives = 96/134 (71%)
Frame = -1
Query: 753 HLLNVARALFFQSRVPIKFWGECVFTAIYLINRIPSPLLQNKAHFQLLYNSPVDYGFLRV 574
H+LNVARAL FQS +P++FWG+CV TA++LINR+P+P+L NK+ ++ L N P Y L+
Sbjct: 707 HILNVARALLFQSNIPLEFWGDCVLTAVFLINRLPTPVLNNKSPYEKLKNIPPAYESLKT 766
Query: 573 FGSLCYASTLLFHRHKFYPRATVCVFVGYTPGIKGYKLYDIVTKSFFHSRDVVFHENLFP 394
FG LCY+ST RHKF PRA CVF+GY G KGYKL DI T + SR V+FHE++FP
Sbjct: 767 FGCLCYSSTSPKQRHKFEPRARACVFLGYPLGYKGYKLLDIETHAVSISRHVIFHEDIFP 826
Query: 393 FHSIPHSNDLIDPF 352
F S +D+ D F
Sbjct: 827 FISSTIKDDIKDFF 840
>gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1454
Score = 156 bits (394), Expect = 8e-36
Identities = 92/241 (38%), Positives = 127/241 (52%)
Frame = -1
Query: 753 HLLNVARALFFQSRVPIKFWGECVFTAIYLINRIPSPLLQNKAHFQLLYNSPVDYGFLRV 574
H+LNVARAL FQS+VP+ WG+CV TA++LINR PS LL NK +++L + Y LR
Sbjct: 721 HILNVARALMFQSQVPLSLWGDCVLTAVFLINRTPSQLLMNKTPYEILTGTAPVYEQLRT 780
Query: 573 FGSLCYASTLLFHRHKFYPRATVCVFVGYTPGIKGYKLYDIVTKSFFHSRDVVFHENLFP 394
FG LCY+ST RHKF PR+ C+F+GY G KGYKL D+ + + F SR+V FHE +FP
Sbjct: 781 FGCLCYSSTSPKQRHKFQPRSRACLFLGYPSGYKGYKLMDLESNTVFISRNVQFHEEVFP 840
Query: 393 FHSIPHSNDLIDPFLXXXXXXXXXXXXXXXXPSINNSAPFVSPLPSEHIAHNTPTQLILQ 214
P S + F I+++ S LPS+ + P Q+ Q
Sbjct: 841 LAKNPGSESSLKLFTPMVPVSSGI---------ISDTTHSPSSLPSQ--ISDLPPQISSQ 889
Query: 213 XXXXXXXXXXXXXXXSYLRDFHCNLFSNNPSHTSNSPYTIENYIFYANFSPSYSNYLLTI 34
++L D+HCN S+ Y I + I Y+ SPS+ Y+ I
Sbjct: 890 ---------RVRKPPAHLNDYHCNTMQ------SDHKYPISSTISYSKISPSHMCYINNI 934
Query: 33 S 31
+
Sbjct: 935 T 935
>gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1461
Score = 155 bits (391), Expect = 2e-35
Identities = 94/255 (36%), Positives = 128/255 (50%), Gaps = 4/255 (1%)
Frame = -1
Query: 753 HLLNVARALFFQSRVPIKFWGECVFTAIYLINRIPSPLLQNKAHFQLLYNSPVDYGFLRV 574
H+LNVARAL FQS + + +WG+CV TA++LINR PS LL NK F++L DY L+
Sbjct: 732 HILNVARALMFQSNMSLPYWGDCVLTAVFLINRTPSALLSNKTPFEVLTGKLPDYSQLKT 791
Query: 573 FGSLCYASTLLFHRHKFYPRATVCVFVGYTPGIKGYKLYDIVTKSFFHSRDVVFHENLFP 394
FG LCY+ST RHKF PR+ CVF+GY G KGYKL D+ + SR+V FHE LFP
Sbjct: 792 FGCLCYSSTSSKQRHKFLPRSRACVFLGYPFGFKGYKLLDLESNVVHISRNVEFHEELFP 851
Query: 393 FHSIPHS----NDLIDPFLXXXXXXXXXXXXXXXXPSINNSAPFVSPLPSEHIAHNTPTQ 226
S S +D+ P +++ S LPS I+ +T
Sbjct: 852 LASSQQSATTASDVFTPM-----------------DPLSSGNSITSHLPSPQISPSTQIS 894
Query: 225 LILQXXXXXXXXXXXXXXXSYLRDFHCNLFSNNPSHTSNSPYTIENYIFYANFSPSYSNY 46
++L+D+HC + + SH I + + Y+ SPS+ Y
Sbjct: 895 -----------KRRITKFPAHLQDYHCYFVNKDDSH------PISSSLSYSQISPSHMLY 937
Query: 45 LLTISFTYESQFYHE 1
+ IS Q YHE
Sbjct: 938 INNISKIPIPQSYHE 952
>emb|CAN82526.1| hypothetical protein VITISV_028058 [Vitis vinifera]
Length = 1125
Score = 153 bits (387), Expect = 5e-35
Identities = 93/259 (35%), Positives = 129/259 (49%), Gaps = 8/259 (3%)
Frame = -1
Query: 753 HLLNVARALFFQSRVPIKFWGECVFTAIYLINRIPSPLLQNKAHFQLLYNSPVDYGFLRV 574
H+L ARA FQ+ +P+ FW ECV TA+++INR+P+PLL + F+ LY Y +RV
Sbjct: 415 HILESARAFXFQAHLPLPFWAECVSTAVHIINRLPTPLLSRQTPFERLYGKLPSYSHIRV 474
Query: 573 FGSLCYASTLLFHRHKFYPRATVCVFVGYTPGIKGYKLYDIVTKSFFHSRDVVFHENLFP 394
FG L YA T + HKF PRA C+F+GY G K YKLYD+ T F SRDVVFHE +FP
Sbjct: 475 FGCLAYA-TNVHVPHKFAPRAKRCIFLGYPVGQKAYKLYDLDTHQMFTSRDVVFHETIFP 533
Query: 393 FHSIPHSNDLIDPFLXXXXXXXXXXXXXXXXPSINNSAPFVSPLPSEHIAHNTPTQLILQ 214
+ SIP + DPFL S H+A P ++ +
Sbjct: 534 YESIPSPSSNSDPFLL-----------------------------SHHLASPPPEPILRR 564
Query: 213 XXXXXXXXXXXXXXXSYLRDFHCNLFSNNPSHT---SNSP-----YTIENYIFYANFSPS 58
LRD+ CN ++ P+H S+SP Y + N++ Y +SP
Sbjct: 565 SQRPHHPPMA-------LRDYVCNQVTS-PNHLPPLSSSPQKGTRYPLCNFVSYHRYSPQ 616
Query: 57 YSNYLLTISFTYESQFYHE 1
+ ++ +S E Y E
Sbjct: 617 HRSFTAAVSQDIEPTSYAE 635
>emb|CAB10225.1| retrovirus-related like polyprotein [Arabidopsis thaliana]
gi|7268152|emb|CAB78488.1| retrovirus-related like
polyprotein [Arabidopsis thaliana]
Length = 1489
Score = 151 bits (382), Expect = 2e-34
Identities = 95/289 (32%), Positives = 139/289 (48%), Gaps = 38/289 (13%)
Frame = -1
Query: 753 HLLNVARALFFQSRVPIKFWGECVFTAIYLINRIPSPLLQNKAHFQLLYNSPVDYGFLRV 574
H+LNVARAL FQS +P+++W +CV TA++LINR+PSPLL NK+ ++L+ N DY L+
Sbjct: 740 HILNVARALLFQSNIPMQYWSDCVTTAVFLINRLPSPLLNNKSPYELILNKQPDYSLLKN 799
Query: 573 FGSLCYASTLLFHRHKFYPRATVCVFVGYTPGIKGYKLYDIVTKSFFHSRDVVFHENLFP 394
FG LC+ ST R KF PRA CVF+GY G KGYK+ D+ + S SR+VVF E++FP
Sbjct: 800 FGCLCFVSTNAHERTKFTPRARACVFLGYPSGYKGYKVLDLESHSVTVSRNVVFKEHVFP 859
Query: 393 FHSIPHSNDLIDPF----------------LXXXXXXXXXXXXXXXXPSINNSAPFVSPL 262
F + N +D F + + N+++ S L
Sbjct: 860 FKTSELLNKAVDMFPNSILPLPAPLHFVETMPLIDEDSLIPTTTDSRTADNHASSSSSAL 919
Query: 261 PS-EHIAHNTPTQLILQXXXXXXXXXXXXXXXSYLRDFHCNLF----------SNNPSH- 118
PS + NT TQ I SYL ++HC+L S+ P H
Sbjct: 920 PSIIPPSSNTETQDIDSNAVPITRSKRTTRAPSYLSEYHCSLVPSISTLPPTDSSIPIHP 979
Query: 117 ----------TSNSPYTIENYIFYANFSPSYSNYLLTISFTYESQFYHE 1
+PY I + Y ++P +Y+ + E + + +
Sbjct: 980 LPEIFTASSPKKTTPYPISTVVSYDKYTPLCQSYIFAYNTETEPKTFSQ 1028
>emb|CAN73437.1| hypothetical protein VITISV_031733 [Vitis vinifera]
Length = 1322
Score = 151 bits (381), Expect = 3e-34
Identities = 96/270 (35%), Positives = 131/270 (48%), Gaps = 19/270 (7%)
Frame = -1
Query: 753 HLLNVARALFFQSRVPIKFWGECVFTAIYLINRIPSPLLQNKAHFQLLYNSPVDYGFLRV 574
H+L ARA FQ+ +P+ FW ECV TA+++INR+P+PLL + F+ LY Y +RV
Sbjct: 587 HILESARAFRFQAHLPLPFWAECVSTAVHIINRLPTPLLSRQTPFERLYGKLPSYSHIRV 646
Query: 573 FGSLCYASTLLFHRHKFYPRATVCVFVGYTPGIKGYKLYDIVTKSFFHSRDVVFHENLFP 394
FG L YA T + HKF PRA C+F+GY G K YKLYD+ T F SRDVVFHE +FP
Sbjct: 647 FGCLAYA-TNVHVPHKFAPRAKRCIFLGYPVGQKAYKLYDLDTHQMFTSRDVVFHETIFP 705
Query: 393 FHSIPHSNDLIDPFLXXXXXXXXXXXXXXXXPSINN-SAPFVSPLPSEHIA--------- 244
+ SIP + DP + SI++ S P P P E I+
Sbjct: 706 YESIPSPSSNSDPVI---------------PLSISDLSPPVQQPSPPEPISPIQQPSLPN 750
Query: 243 --HNTPTQLILQXXXXXXXXXXXXXXXSYLRDFHCN--LFSNNPSHTSNSP-----YTIE 91
P+ LRD+ CN F N+ S+SP Y +
Sbjct: 751 SVSTQPSHASPPPEPILRRSQRPHHPPMALRDYVCNQVTFPNHLPPLSSSPQKGTRYPLC 810
Query: 90 NYIFYANFSPSYSNYLLTISFTYESQFYHE 1
N++ Y +SP + ++ +S E Y E
Sbjct: 811 NFVSYHRYSPQHRSFTAAVSQDIEPTSYAE 840
>gb|AAD41979.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1264
Score = 150 bits (379), Expect = 5e-34
Identities = 89/241 (36%), Positives = 122/241 (50%)
Frame = -1
Query: 753 HLLNVARALFFQSRVPIKFWGECVFTAIYLINRIPSPLLQNKAHFQLLYNSPVDYGFLRV 574
H+LNVARAL FQS+VP+ WGECV TA++LINR PS LL NK +++L + YG LR
Sbjct: 580 HILNVARALMFQSQVPLFLWGECVLTAVFLINRTPSQLLSNKTPYEILSGTAPQYGQLRT 639
Query: 573 FGSLCYASTLLFHRHKFYPRATVCVFVGYTPGIKGYKLYDIVTKSFFHSRDVVFHENLFP 394
FG LCY+ST RHKF PR+ C+F+GY+ G KGYKL D+ + + F SR+VVF E +FP
Sbjct: 640 FGCLCYSSTSPKQRHKFQPRSKACIFLGYSSGYKGYKLMDLESNAIFISRNVVFLEEVFP 699
Query: 393 FHSIPHSNDLIDPFLXXXXXXXXXXXXXXXXPSINNSAPFVSPLPSEHIAHNTPTQLILQ 214
S D + S+++ + P S PT
Sbjct: 700 LAGTKKSADSL-KLCTPLVLVPSGIQQQSSFSSLSSQISDLPPQISSQRDRKPPT----- 753
Query: 213 XXXXXXXXXXXXXXXSYLRDFHCNLFSNNPSHTSNSPYTIENYIFYANFSPSYSNYLLTI 34
+L D+ CN + S+ Y I + I Y+ SPS+ Y+ I
Sbjct: 754 ----------------HLSDYVCN------NMQSDQKYPISSTISYSQISPSHMCYINNI 791
Query: 33 S 31
+
Sbjct: 792 T 792
>gb|AAC33963.1| contains similarity to reverse transcriptases (Pfam; rvt.hmm, score:
11.19) [Arabidopsis thaliana]
Length = 1633
Score = 149 bits (377), Expect = 8e-34
Identities = 97/282 (34%), Positives = 135/282 (47%), Gaps = 33/282 (11%)
Frame = -1
Query: 753 HLLNVARALFFQSRVPIKFWGECVFTAIYLINRIPSPLLQNKAHFQLLYNSPVDYGFLRV 574
HLLN+AR+L FQS VP+++W +CV TA YLINR+PSPLL NK F+LL DY L+
Sbjct: 663 HLLNIARSLLFQSNVPLQYWSDCVLTAAYLINRLPSPLLDNKTPFELLLKKIPDYTLLK- 721
Query: 573 FGSLCYASTLLFHRHKFYPRATVCVFVGYTPGIKGYKLYDIVTKSFFHSRDVVFHENLFP 394
LCYAST + R+KF PRA CVF+GY G KGYK+ D+ + S +R+VVFHE FP
Sbjct: 722 -SCLCYASTNVHDRNKFSPRARPCVFLGYPSGYKGYKVLDLESHSISITRNVVFHETKFP 780
Query: 393 FHSIPHSNDLIDPF------------LXXXXXXXXXXXXXXXXPSINNSAPFVS---PLP 259
F + + +D F S +NSA S PLP
Sbjct: 781 FKTSKFLKESVDMFPNSILPLPAPLHFVESMPLDDDLRADDNNASTSNSASSASSIPPLP 840
Query: 258 SEHIAHNTPTQLILQXXXXXXXXXXXXXXXSYLRDFHCN----LFSNNPSHTSN------ 109
S NT I +YL ++HCN L S +P+ +++
Sbjct: 841 STVNTQNTDALDIDTNSVPIARPKRNAKAPAYLSEYHCNSVPFLSSLSPTTSTSIETPSS 900
Query: 108 --------SPYTIENYIFYANFSPSYSNYLLTISFTYESQFY 7
+PY + I Y +P + +Y+ + E + +
Sbjct: 901 SIPPKKITTPYPMSTAISYDKLTPLFHSYICAYNVETEPKAF 942
>gb|ACB45081.1| putative polyprotein [Solanum habrochaites]
Length = 559
Score = 149 bits (377), Expect = 8e-34
Identities = 90/260 (34%), Positives = 126/260 (48%), Gaps = 9/260 (3%)
Frame = -1
Query: 753 HLLNVARALFFQSRVPIKFWGECVFTAIYLINRIPSPLLQNKAHFQLLYNSPVDYGFLRV 574
H++ ARA+ FQ +PIKFWGEC A+++INRIPS +L NK+ F++++ P D ++++
Sbjct: 83 HIMETARAIRFQGNIPIKFWGECALAAVHIINRIPSTVLLNKSPFEIMFGKPPDLSYMKI 142
Query: 573 FGSLCYASTLLFHRHKFYPRATVCVFVGYTPGIKGYKLYDIVTKSFFHSRDVVFHENLFP 394
G LCYA+TLL KF PRA V + Y KGYKLYD+ K FF SRDVVF+E FP
Sbjct: 143 IGCLCYATTLL-RSDKFGPRAIKSVLMSYGTTQKGYKLYDLQNKVFFVSRDVVFNEFTFP 201
Query: 393 FH---------SIPHSNDLIDPFLXXXXXXXXXXXXXXXXPSINNSAPFVSPLPSEHIAH 241
F S+ L P I+N+ + P +H
Sbjct: 202 FQTQCFDDIQDSVSSIESLDLPVRFDDLEDYHQQDQPTIDDPIDNADNAFANAPEDHHQQ 261
Query: 240 NTPTQLILQXXXXXXXXXXXXXXXSYLRDFHCNLFSNNPSHTSNSPYTIENYIFYANFSP 61
+ PT + +DF S + SN Y++EN I Y N SP
Sbjct: 262 DQPTMDDSFLSSNRRQSTRTSRPPIWQKDFVTTFKSRS---RSNCLYSLENNIDYKNLSP 318
Query: 60 SYSNYLLTISFTYESQFYHE 1
Y + +S E +FYH+
Sbjct: 319 YYQCCIANLSVDTEPKFYHQ 338
>emb|CAN65808.1| hypothetical protein VITISV_033389 [Vitis vinifera]
Length = 1279
Score = 149 bits (377), Expect = 8e-34
Identities = 97/271 (35%), Positives = 134/271 (49%), Gaps = 20/271 (7%)
Frame = -1
Query: 753 HLLNVARALFFQSRVPIKFWGECVFTAIYLINRIPSPLLQNKAHFQLLYNSPVDYGFLRV 574
H+L ARA FQ+ +P+ FW ECV TA+++INR+P+PLL + F+ LY Y +RV
Sbjct: 564 HILESARAFRFQAHLPLPFWAECVSTAVHIINRLPTPLLSRQTPFERLYGKLPSYSHIRV 623
Query: 573 FGSLCYASTLLFHRHKFYPRATVCVFVGYTPGIKGYKLYDIVTKSFFHSRDVVFHENLFP 394
FG L YA T + HKF PRA C+F+GY G K YKLYD+ T F SRDVVFHE +FP
Sbjct: 624 FGCLAYA-TNVHVPHKFAPRAKRCIFLGYPVGQKAYKLYDLDTHQMFTSRDVVFHETIFP 682
Query: 393 FHSIPHSNDLIDPFLXXXXXXXXXXXXXXXXPSINN-SAPFVSPLPSEHIA--------- 244
+ SIP + DP + SI++ S P P P E I+
Sbjct: 683 YESIPSPSSNSDPVI---------------PLSISDLSPPVPQPSPPEPISPIQQPSLPN 727
Query: 243 --HNTPTQLILQXXXXXXXXXXXXXXXSYLRDFHCNLFSNNPSH---TSNSP-----YTI 94
P+ LRD+ CN + +P+H S+SP Y +
Sbjct: 728 SVSTQPSPASPPPEPILRRSQXPHHPPMALRDYVCNQVT-SPNHLPPLSSSPQKGTRYPL 786
Query: 93 ENYIFYANFSPSYSNYLLTISFTYESQFYHE 1
N++ Y +SP + ++ +S E Y E
Sbjct: 787 CNFVSYHRYSPQHRSFTAAVSQDIEPTSYAE 817
>emb|CAA72989.1| unnamed protein product [Brassica oleracea var. viridis]
Length = 1131
Score = 149 bits (375), Expect = 1e-33
Identities = 68/120 (56%), Positives = 86/120 (71%)
Frame = -1
Query: 753 HLLNVARALFFQSRVPIKFWGECVFTAIYLINRIPSPLLQNKAHFQLLYNSPVDYGFLRV 574
HLLNVARAL FQS+VP+++WG+CV TA +LINR PSPLL NK+ +++L Y LR
Sbjct: 681 HLLNVARALMFQSQVPLQYWGDCVLTAAFLINRTPSPLLANKSPYEVLMGKAPQYDQLRT 740
Query: 573 FGSLCYASTLLFHRHKFYPRATVCVFVGYTPGIKGYKLYDIVTKSFFHSRDVVFHENLFP 394
FG LCY ST RHKF PR+ CVF+GY G KGYKL D+ + + SR+V FHE++FP
Sbjct: 741 FGCLCYGSTSPKQRHKFMPRSRACVFLGYPSGYKGYKLLDLESNKIYISRNVTFHEDIFP 800