BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia26_contig00026519
         (1904 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor rpoD ...   673   0.0  
ref|XP_006350582.1| PREDICTED: RNA polymerase sigma factor sigE,...   643   0.0  
ref|XP_007038959.1| Sigma factor E isoform 1 [Theobroma cacao] g...   637   e-180
ref|XP_004234179.1| PREDICTED: RNA polymerase sigma factor sigE,...   635   e-179
ref|XP_006376620.1| RNA polymerase sigma subunit SigE family pro...   629   e-177
ref|XP_007219010.1| hypothetical protein PRUPE_ppa004259mg [Prun...   623   e-176
ref|XP_004308009.1| PREDICTED: RNA polymerase sigma factor sigE,...   614   e-173
gb|EXB72455.1| RNA polymerase sigma factor rpoD [Morus notabilis]     607   e-171
ref|XP_004234180.1| PREDICTED: RNA polymerase sigma factor sigE,...   607   e-171
ref|XP_002513587.1| RNA polymerase sigma factor rpoD, putative [...   601   e-169
ref|XP_003541542.1| PREDICTED: RNA polymerase sigma factor sigE,...   600   e-169
ref|NP_001254001.1| RNA polymerase sigma factor rpoD-like [Glyci...   590   e-166
ref|XP_006422121.1| hypothetical protein CICLE_v10004760mg [Citr...   589   e-165
gb|EYU19623.1| hypothetical protein MIMGU_mgv1a020453mg [Mimulus...   585   e-164
ref|XP_004149458.1| PREDICTED: RNA polymerase sigma factor sigE,...   582   e-163
ref|XP_003602198.1| RNA polymerase sigma factor rpoD [Medicago t...   582   e-163
ref|XP_006581623.1| PREDICTED: RNA polymerase sigma factor sigE,...   580   e-163
ref|XP_006578934.1| PREDICTED: RNA polymerase sigma factor sigE,...   580   e-163
ref|XP_004166500.1| PREDICTED: RNA polymerase sigma factor sigE,...   578   e-162
ref|NP_001276145.1| RNA polymerase sigma factor sigE, chloroplas...   578   e-162

>ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
            gi|302143685|emb|CBI22546.3| unnamed protein product
            [Vitis vinifera]
          Length = 518

 Score =  673 bits (1737), Expect = 0.0
 Identities = 358/518 (69%), Positives = 414/518 (79%), Gaps = 4/518 (0%)
 Frame = -3

Query: 1788 MGVVTVPSSAS--QTPLGLSARFSTHRSPLKRPVILAFNTDKTKNTALITNHEPISLPSD 1615
            MGVVTV SSAS  +TP GL+A+FS H++PL+RP++LAF  DK KN AL+T HEPI LP +
Sbjct: 1    MGVVTVSSSASASRTPFGLNAKFSNHQTPLRRPLVLAFKADKAKNIALVTPHEPIPLPIE 60

Query: 1614 TPKEHKI-LRKSTKSSKRVKAVXXXXXXXXXXXXXDYSEAAAKLENIYKLSSPADISDAE 1438
            T K+HK  LR+++K SKRVKAV              Y+EAAAKLENIYKLS   D+S+AE
Sbjct: 61   TSKDHKKRLRRASKPSKRVKAVSTDEVSPCSVELD-YNEAAAKLENIYKLSPATDVSEAE 119

Query: 1437 DTDRLMXXXXRTKKKVEESDEQVEKEIFHNVVRSH-KKAKRLNLDXXXXXXXXXXXEMVI 1261
            D +R++    + +K+V  +D++ EKE+  NVVR H KK KRL+L+           + V 
Sbjct: 120  DLERVVRRGRQRRKRVTLADDKAEKEVSDNVVRIHNKKPKRLSLEKRIALSKMKQEKAVA 179

Query: 1260 SSDGKENNDVEGGDVERLLREYSGSTDLVSLDWKKMKIPHVLPSSEHAWLFKLMQPMKAL 1081
            S   K ++  E  +++ L+REYS STDLVSLDWKKMKIP VLP SEHAWLFKLMQPMK L
Sbjct: 180  SIQKKRDSKNEDENIDVLVREYSASTDLVSLDWKKMKIPPVLPPSEHAWLFKLMQPMKGL 239

Query: 1080 LQVKENLKKDMGREPTDTELAETTKMSVPKVRRQIEVGRAARNKLIRHNLRLVLFVINKY 901
            L+VK+NL+KD+GREPTD ELAE   MS  +VRR +EVG+AARNKLI+HNLRLVLFVINKY
Sbjct: 240  LEVKDNLQKDLGREPTDGELAEAMSMSAVQVRRHMEVGQAARNKLIKHNLRLVLFVINKY 299

Query: 900  FQEFASGSRFQDLCQAGVKGLITAIDRFEPKRRSRLSTYGLFWIRHSIMRSMTLSSFTRV 721
            FQEFA+G +FQDLCQAGVKGLITAIDRFEPKR  RLSTYGLFWIRH+IMRSMTLSSFTRV
Sbjct: 300  FQEFANGPKFQDLCQAGVKGLITAIDRFEPKRSFRLSTYGLFWIRHAIMRSMTLSSFTRV 359

Query: 720  SFGLESVRVEIQRAKLELTFELEREPTEDEIIEKVGISPERYHEVMRASKPVLSLHARHA 541
            SFGLESVRVEIQRAKLEL F+L+R PTE+EIIEKVGISPERYHEVMRASK VLSLHARHA
Sbjct: 360  SFGLESVRVEIQRAKLELLFKLQRLPTEEEIIEKVGISPERYHEVMRASKSVLSLHARHA 419

Query: 540  ITQEEFINGITDTEGVGGDKRRQPAXXXXXXXXXXXXLKPKESMVIRQRYGLDGKGDRTL 361
             TQEE+INGITD EGVGGD+ RQ A            LKPKES+V+RQRYGLDGKGDRTL
Sbjct: 420  TTQEEYINGITDVEGVGGDRGRQLALLRLALDDVLDSLKPKESLVMRQRYGLDGKGDRTL 479

Query: 360  GEIGGNLNISREMVRKHEVKALMKLKHQARVDYLRRYI 247
            GEI GNL+ISREMVRKHEVKALMKLKH ARVDYLR+YI
Sbjct: 480  GEIAGNLSISREMVRKHEVKALMKLKHPARVDYLRQYI 517


>ref|XP_006350582.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Solanum tuberosum]
          Length = 516

 Score =  643 bits (1658), Expect = 0.0
 Identities = 342/517 (66%), Positives = 403/517 (77%), Gaps = 3/517 (0%)
 Frame = -3

Query: 1788 MGVVTVPSSASQTPLGLSARFSTHRSPLKRPVILAFNTDKTKNTALITNHEPISLPSDTP 1609
            MGVVTV SSAS++PLGLS+RFST   PLKRPVI++F  DKTKNT LI   E ISL  +T 
Sbjct: 1    MGVVTVSSSASRSPLGLSSRFSTRLCPLKRPVIVSFKKDKTKNTTLIAPKESISLSIETS 60

Query: 1608 KEH-KILRKSTKSSKRVKAVXXXXXXXXXXXXXDYSEAAAKLENIYKLSSPADISDAEDT 1432
            KE+ K  R+ +K S+RV AV              YSEAAAKLE+IYK S     S+ E  
Sbjct: 61   KENEKRSRRVSKRSERVHAVAIEASPSTLELD--YSEAAAKLESIYKRSLETASSNTEVQ 118

Query: 1431 DRLMXXXXRTKKKVEESDEQVEKEIFHNVVRSHKK-AKRLNLDXXXXXXXXXXXEMVISS 1255
            D L+    RT+K++ E DE+ +KE+  NVV++ +K +KRLNLD           EMV SS
Sbjct: 119  DHLVKRRPRTRKRIVEGDEEAKKEVADNVVKNRRKTSKRLNLDQRIALLKNKEGEMVASS 178

Query: 1254 DGKE-NNDVEGGDVERLLREYSGSTDLVSLDWKKMKIPHVLPSSEHAWLFKLMQPMKALL 1078
            + ++   D E   +++L+REYSG+TDL SLDWKKMKIP VLPSSEH WLFKLMQPMKA+L
Sbjct: 179  ERRKLKEDTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSSEHVWLFKLMQPMKAIL 238

Query: 1077 QVKENLKKDMGREPTDTELAETTKMSVPKVRRQIEVGRAARNKLIRHNLRLVLFVINKYF 898
            QVKENL+ D+GREPTD E+AE T M   ++R+++EVGRAARNKLI+HNLRLVLFV+NKYF
Sbjct: 239  QVKENLQNDLGREPTDGEVAEATNMDASELRKKLEVGRAARNKLIKHNLRLVLFVMNKYF 298

Query: 897  QEFASGSRFQDLCQAGVKGLITAIDRFEPKRRSRLSTYGLFWIRHSIMRSMTLSSFTRVS 718
            Q+FA+GSRFQDLCQAGVKGLITAIDRFEP R+ RLSTYGLFWIRH+I+RSMT SSFT+V 
Sbjct: 299  QDFANGSRFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRSMTTSSFTKVP 358

Query: 717  FGLESVRVEIQRAKLELTFELEREPTEDEIIEKVGISPERYHEVMRASKPVLSLHARHAI 538
            FGLES+RVEIQ+AKLEL FEL+R PT++EII +VG+SPERYHEVM+ SKPV SLHAR+  
Sbjct: 359  FGLESIRVEIQKAKLELLFELQRIPTDEEIIRRVGLSPERYHEVMKVSKPVSSLHARNKT 418

Query: 537  TQEEFINGITDTEGVGGDKRRQPAXXXXXXXXXXXXLKPKESMVIRQRYGLDGKGDRTLG 358
            TQEE INGITD +GV GDKR+QPA            LKPKES+VIRQRYGLDGKGDRTLG
Sbjct: 419  TQEELINGITDVDGVDGDKRKQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLG 478

Query: 357  EIGGNLNISREMVRKHEVKALMKLKHQARVDYLRRYI 247
            EI GNLNISREMVRKHEVKALMKLKH  RVDY+RRYI
Sbjct: 479  EIAGNLNISREMVRKHEVKALMKLKHPTRVDYVRRYI 515


>ref|XP_007038959.1| Sigma factor E isoform 1 [Theobroma cacao]
            gi|590673674|ref|XP_007038960.1| Sigma factor E isoform 1
            [Theobroma cacao] gi|508776204|gb|EOY23460.1| Sigma
            factor E isoform 1 [Theobroma cacao]
            gi|508776205|gb|EOY23461.1| Sigma factor E isoform 1
            [Theobroma cacao]
          Length = 516

 Score =  637 bits (1642), Expect = e-180
 Identities = 337/516 (65%), Positives = 394/516 (76%), Gaps = 1/516 (0%)
 Frame = -3

Query: 1788 MGVVTVPSSASQTPLGLSARFSTHRSPLKRPVILAFNTDKTKNTALITNHEPISLPSDTP 1609
            MGVV+V SSA++TPLGLS +FST R   +RP+ +AF  DK+ NTAL+T  E I LP +T 
Sbjct: 1    MGVVSVSSSAARTPLGLSTKFSTQRCTSRRPLTVAFKADKSDNTALVTPQEHILLPIETA 60

Query: 1608 KEHKILRKSTKSSKRVKAVXXXXXXXXXXXXXDYSEAAAKLENIYKLSSPADISDAEDTD 1429
            KEH   R   K   ++                DY+EAAAKLENIYKLS     SD E+ +
Sbjct: 61   KEHPKRRGKAKKDPKIVNHVFTDDGSPCTLEVDYNEAAAKLENIYKLSPATRSSDVEEVE 120

Query: 1428 RLMXXXXRTKKKVEESDEQVEKEIFHNVVRSH-KKAKRLNLDXXXXXXXXXXXEMVISSD 1252
              +    + +K+ +ESDE+        VVR+   + KRL+LD           + V+S  
Sbjct: 121  GKIKGRRQRRKRSKESDEKGVNSNDQIVVRNQTNRIKRLSLDNRIALKKNREEKPVVSVR 180

Query: 1251 GKENNDVEGGDVERLLREYSGSTDLVSLDWKKMKIPHVLPSSEHAWLFKLMQPMKALLQV 1072
             K++++ E   ++RL+R+YS STDLVSLDW+KMKIP VLPS EH WLFKLMQPMKALLQ 
Sbjct: 181  RKKSSENESEKIDRLVRDYSASTDLVSLDWRKMKIPPVLPSIEHTWLFKLMQPMKALLQA 240

Query: 1071 KENLKKDMGREPTDTELAETTKMSVPKVRRQIEVGRAARNKLIRHNLRLVLFVINKYFQE 892
            KENL+KD+GR+PT+ ELAE T MS  +VR+ +EVG+AARNKLI+HNLRLVLF INKYFQ+
Sbjct: 241  KENLQKDLGRDPTEDELAEATNMSAAQVRKHLEVGQAARNKLIKHNLRLVLFSINKYFQD 300

Query: 891  FASGSRFQDLCQAGVKGLITAIDRFEPKRRSRLSTYGLFWIRHSIMRSMTLSSFTRVSFG 712
            FA+G RFQDLCQAGVKGLITAIDRFEP+RR RLSTY LFWIRH+I+RSMTLSSFTRVSFG
Sbjct: 301  FANGPRFQDLCQAGVKGLITAIDRFEPRRRFRLSTYSLFWIRHAIIRSMTLSSFTRVSFG 360

Query: 711  LESVRVEIQRAKLELTFELEREPTEDEIIEKVGISPERYHEVMRASKPVLSLHARHAITQ 532
            LESVRVEIQRAKLEL FEL REPTE+EII+KVGISPERY EVMRASKPV SLH+RH++TQ
Sbjct: 361  LESVRVEIQRAKLELLFELHREPTEEEIIKKVGISPERYQEVMRASKPVASLHSRHSVTQ 420

Query: 531  EEFINGITDTEGVGGDKRRQPAXXXXXXXXXXXXLKPKESMVIRQRYGLDGKGDRTLGEI 352
            EEFINGITD +GVGGD RRQPA            LKPKES+VIRQRYGLDGKGDRTLGEI
Sbjct: 421  EEFINGITDIDGVGGDHRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEI 480

Query: 351  GGNLNISREMVRKHEVKALMKLKHQARVDYLRRYIV 244
             GNLNISREMVRKHEVKALMKLKH ARVDYLRRY+V
Sbjct: 481  AGNLNISREMVRKHEVKALMKLKHPARVDYLRRYVV 516


>ref|XP_004234179.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform 1 [Solanum
            lycopersicum]
          Length = 516

 Score =  635 bits (1638), Expect = e-179
 Identities = 335/517 (64%), Positives = 400/517 (77%), Gaps = 3/517 (0%)
 Frame = -3

Query: 1788 MGVVTVPSSASQTPLGLSARFSTHRSPLKRPVILAFNTDKTKNTALITNHEPISLPSDTP 1609
            MGVVTV SSAS++PLGLS+RFS    PLKRPVI++F  D TKNT L++  E IS P +T 
Sbjct: 1    MGVVTVSSSASRSPLGLSSRFSARLCPLKRPVIVSFKKDITKNTTLVSPKESISSPIETS 60

Query: 1608 KEH-KILRKSTKSSKRVKAVXXXXXXXXXXXXXDYSEAAAKLENIYKLSSPADISDAEDT 1432
            KE+ K  R+ +K ++RV AV              YSEAAAKLE+IYK S      + E  
Sbjct: 61   KENEKRSRRVSKRTERVHAVTIEAPPSTLELD--YSEAAAKLESIYKRSLETASPNTEVK 118

Query: 1431 DRLMXXXXRTKKKVEESDEQVEKEIFHNVVRSH-KKAKRLNLDXXXXXXXXXXXEMVISS 1255
            D L+    RT+K++ ESDE+ +KE+  NVV++  KK+KRLNLD           +M+ SS
Sbjct: 119  DHLVKRRPRTRKRIVESDEEAKKEVVDNVVKNRRKKSKRLNLDQRIALLKNKEGKMLASS 178

Query: 1254 DGKE-NNDVEGGDVERLLREYSGSTDLVSLDWKKMKIPHVLPSSEHAWLFKLMQPMKALL 1078
            + ++ N D E   +++L+REYSG+TDL SLDWKKMKIP VLPSSEH WLFKLMQPMKA+L
Sbjct: 179  ERRKLNEDTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSSEHTWLFKLMQPMKAIL 238

Query: 1077 QVKENLKKDMGREPTDTELAETTKMSVPKVRRQIEVGRAARNKLIRHNLRLVLFVINKYF 898
            QVKENL+ D+GREPTD E+AE T M   ++R+++E GRAARNKLI+HNLRLVLFV+NKYF
Sbjct: 239  QVKENLQNDLGREPTDGEVAEATNMDASELRKKLEAGRAARNKLIKHNLRLVLFVMNKYF 298

Query: 897  QEFASGSRFQDLCQAGVKGLITAIDRFEPKRRSRLSTYGLFWIRHSIMRSMTLSSFTRVS 718
            Q+FA+ SRFQDLCQAGVKGLITAIDRFEP R+ RLSTYGLFWIRH+I+R MT SSFT+V 
Sbjct: 299  QDFANASRFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRYMTTSSFTKVP 358

Query: 717  FGLESVRVEIQRAKLELTFELEREPTEDEIIEKVGISPERYHEVMRASKPVLSLHARHAI 538
            FGLES+RVEIQ+AKLEL FEL+R PT+DEII++VG SPERYHEVM+ SKP+ SLHAR+  
Sbjct: 359  FGLESIRVEIQKAKLELLFELQRIPTDDEIIKRVGFSPERYHEVMKVSKPIFSLHARNKT 418

Query: 537  TQEEFINGITDTEGVGGDKRRQPAXXXXXXXXXXXXLKPKESMVIRQRYGLDGKGDRTLG 358
            TQEE INGITD +GV GDKR+QPA            LKPKES+VIRQRYGLDGKGDRTLG
Sbjct: 419  TQEELINGITDVDGVDGDKRKQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLG 478

Query: 357  EIGGNLNISREMVRKHEVKALMKLKHQARVDYLRRYI 247
            EI GNLNISREMVRKHEVKALMKLKH  RVDY+RRYI
Sbjct: 479  EIAGNLNISREMVRKHEVKALMKLKHPTRVDYVRRYI 515


>ref|XP_006376620.1| RNA polymerase sigma subunit SigE family protein [Populus
            trichocarpa] gi|550326141|gb|ERP54417.1| RNA polymerase
            sigma subunit SigE family protein [Populus trichocarpa]
          Length = 512

 Score =  629 bits (1621), Expect = e-177
 Identities = 336/516 (65%), Positives = 394/516 (76%), Gaps = 1/516 (0%)
 Frame = -3

Query: 1788 MGVVTVPSSASQTPLGLSARFSTHRSPLKRPVILAFNTDKTKNTALITNHEPISLPSDTP 1609
            MGVV+V SSAS+TPLGLS +FST+ S  KRP+I+AF  +K+ NT+L+  HE I LP +T 
Sbjct: 1    MGVVSVSSSASRTPLGLSTKFSTYGSTAKRPLIVAFKANKSNNTSLVAPHEQIPLPVETT 60

Query: 1608 KEHKILRKSTKSSKRVKAVXXXXXXXXXXXXXDYSEAAAKLENIYKLSSPADISDAEDTD 1429
            K  K L KS KSS R+KAV              Y+EAAAKLENIYKLS   D SD ED  
Sbjct: 61   KGKKRLGKSKKSSNRLKAVRTEVSPCTLLVD--YNEAAAKLENIYKLSPGTDTSDVEDAS 118

Query: 1428 RLMXXXXRTKKKVEESDEQVEKEIFHNVVRSH-KKAKRLNLDXXXXXXXXXXXEMVISSD 1252
             ++    + K+K+ E D++ E      +VR+  KKAKRL+L+           ++V S+ 
Sbjct: 119  GVIRRGRQRKRKISEGDKETEDRTGKIIVRNRAKKAKRLSLEKRISLRIKNEEKLVSSAG 178

Query: 1251 GKENNDVEGGDVERLLREYSGSTDLVSLDWKKMKIPHVLPSSEHAWLFKLMQPMKALLQV 1072
             +++   E   ++ L+REYS STDLVSLDWKKMKIP VL SSEH WLFKLMQPMKALLQV
Sbjct: 179  KRKDRKNENEKIDDLVREYSASTDLVSLDWKKMKIPPVLTSSEHVWLFKLMQPMKALLQV 238

Query: 1071 KENLKKDMGREPTDTELAETTKMSVPKVRRQIEVGRAARNKLIRHNLRLVLFVINKYFQE 892
            KE+L++++G EPTD ELA+ T M V +VR+QI VGRAARNKLI+HNLRLVLFVI KYFQ+
Sbjct: 239  KEHLQENLGGEPTDVELAKATNMDVLQVRKQIAVGRAARNKLIKHNLRLVLFVIKKYFQD 298

Query: 891  FASGSRFQDLCQAGVKGLITAIDRFEPKRRSRLSTYGLFWIRHSIMRSMTLSSFTRVSFG 712
            FA+G++FQD CQAGVKGLITAIDRFEPKRR RLSTYGLFWIRH+I+RSMTLSSFTRVSFG
Sbjct: 299  FANGTKFQDFCQAGVKGLITAIDRFEPKRRFRLSTYGLFWIRHAIIRSMTLSSFTRVSFG 358

Query: 711  LESVRVEIQRAKLELTFELEREPTEDEIIEKVGISPERYHEVMRASKPVLSLHARHAITQ 532
            LES+R EIQ+AKLEL F+L+R+P EDEIIEKV ISPERYHEV RASKPVLSLH+RH  TQ
Sbjct: 359  LESIRSEIQKAKLELWFQLKRQPMEDEIIEKVRISPERYHEVTRASKPVLSLHSRHKTTQ 418

Query: 531  EEFINGITDTEGVGGDKRRQPAXXXXXXXXXXXXLKPKESMVIRQRYGLDGKGDRTLGEI 352
            EEFI GI D +  GGD RRQ A            LKPKES+V+RQRYGLDGKGDRTLGEI
Sbjct: 419  EEFIGGIADVD--GGDDRRQSALLRLALDDVLDSLKPKESLVVRQRYGLDGKGDRTLGEI 476

Query: 351  GGNLNISREMVRKHEVKALMKLKHQARVDYLRRYIV 244
             GNLNISREMVRKHEVKALMKLKH  RVDYLRRY+V
Sbjct: 477  AGNLNISREMVRKHEVKALMKLKHPTRVDYLRRYVV 512


>ref|XP_007219010.1| hypothetical protein PRUPE_ppa004259mg [Prunus persica]
            gi|462415472|gb|EMJ20209.1| hypothetical protein
            PRUPE_ppa004259mg [Prunus persica]
          Length = 519

 Score =  623 bits (1607), Expect = e-176
 Identities = 340/520 (65%), Positives = 397/520 (76%), Gaps = 5/520 (0%)
 Frame = -3

Query: 1788 MGVVTVPSSASQTPLGLSARFSTHRSPLKRPVILAFNTDKTKNTALITNHEPISLPSDTP 1609
            MGVVTV SSAS+TPLGLS + +  RS L++P+I+AF TD+   TAL+   E I LP +T 
Sbjct: 1    MGVVTVSSSASRTPLGLSTKLTIQRSTLRKPLIVAFKTDEANKTALVAPQEKIPLPIETR 60

Query: 1608 KEH-KILRKSTKSSKRVKAVXXXXXXXXXXXXXDYSEAAAKLENIYKLSSPADI-SDAED 1435
            K+H K L K+ K +K VK+               Y+EAAAKLEN+YK S   +  SD ED
Sbjct: 61   KKHQKRLGKARKLAKSVKSATTDVASPCTLEVD-YNEAAAKLENLYKRSPETEANSDVED 119

Query: 1434 TDRLMXXXXRTKKKVEESD-EQVEKEIFHNVVRSH-KKAKRLNLDXXXXXXXXXXXEMVI 1261
             D LM    + +KK  ESD ++ E    + VVR+  KKAKRL+L+           +++ 
Sbjct: 120  VDGLMRRGRKRRKKTSESDADKDENRTSNTVVRNRTKKAKRLSLNKRVALKWNKDEKVIS 179

Query: 1260 SSDGK-ENNDVEGGDVERLLREYSGSTDLVSLDWKKMKIPHVLPSSEHAWLFKLMQPMKA 1084
            S   K ++   E   +E L+REYS STDLVSLDWKKMKIP VL SSEHAWLFKLMQPMK 
Sbjct: 180  SIVRKRKSRKNENEKIEELVREYSTSTDLVSLDWKKMKIPPVLTSSEHAWLFKLMQPMKG 239

Query: 1083 LLQVKENLKKDMGREPTDTELAETTKMSVPKVRRQIEVGRAARNKLIRHNLRLVLFVINK 904
            LL+VKENL+KD+GREPT+ ELAE T MSV +V++ +EVGRAAR+KLI+HNLRLVLFV+NK
Sbjct: 240  LLEVKENLQKDLGREPTNGELAEATNMSVVQVKKHLEVGRAARSKLIKHNLRLVLFVMNK 299

Query: 903  YFQEFASGSRFQDLCQAGVKGLITAIDRFEPKRRSRLSTYGLFWIRHSIMRSMTLSSFTR 724
            YFQ+FA+G +FQDLCQAGVKGLITAIDRFEPKR  RLSTYGLFWIRH+I+RSMTLSSFTR
Sbjct: 300  YFQDFANGPKFQDLCQAGVKGLITAIDRFEPKRSFRLSTYGLFWIRHAIIRSMTLSSFTR 359

Query: 723  VSFGLESVRVEIQRAKLELTFELEREPTEDEIIEKVGISPERYHEVMRASKPVLSLHARH 544
            VSFGLESVR EIQ+AKL + F L+R PTEDEIIEKVGISPERYHEVMRASKPV SLH+RH
Sbjct: 360  VSFGLESVRAEIQKAKLGMLFALKRMPTEDEIIEKVGISPERYHEVMRASKPVFSLHSRH 419

Query: 543  AITQEEFINGITDTEGVGGDKRRQPAXXXXXXXXXXXXLKPKESMVIRQRYGLDGKGDRT 364
              TQEEFINGITD +GV GD R++PA            LKPKES+VIRQRYGLDGKGDRT
Sbjct: 420  TTTQEEFINGITDVDGVEGDNRQKPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRT 479

Query: 363  LGEIGGNLNISREMVRKHEVKALMKLKHQARVDYLRRYIV 244
            LGEI GNLNISREMVRKHEVKALMKLKH ARVDYLRRY+V
Sbjct: 480  LGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYVV 519


>ref|XP_004308009.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Fragaria vesca subsp.
            vesca]
          Length = 520

 Score =  614 bits (1583), Expect = e-173
 Identities = 341/521 (65%), Positives = 394/521 (75%), Gaps = 6/521 (1%)
 Frame = -3

Query: 1788 MGVVTVPSSASQTPLGLSARF-STHRSPLKRPVILAFNTDKTKNTALITNHEPISLPSDT 1612
            MGVVTV SS S+TPLGLS    S+ RS L++P+I+AF TDK+   AL+   E + LP +T
Sbjct: 1    MGVVTVSSSVSRTPLGLSTNLVSSQRSTLRKPLIVAFRTDKSDKKALVAPQEKVPLPIET 60

Query: 1611 PKE-HKILRKSTKSSKRVKAVXXXXXXXXXXXXXDYSEAAAKLENIYKLSSPADISDAED 1435
             K+  K L K+ K  K VKA               Y+EAAAKLEN+YK S   + SD E+
Sbjct: 61   GKKVQKRLGKARKLPKSVKAALIEEAPTCDLELD-YNEAAAKLENLYKRSPETEASDVEN 119

Query: 1434 TDRLMXXXXRTK-KKVEESDEQVEKEIFHN-VVRS-HKKAKRLNLDXXXXXXXXXXXEMV 1264
             D LM    R + KK+ E D++VEK    + VVRS  KKAKRL+LD           ++ 
Sbjct: 120  VDGLMIKRGRKRRKKISEVDDKVEKRTSDDIVVRSVTKKAKRLSLDKRVALKWNKDEKVA 179

Query: 1263 ISSDGKENND-VEGGDVERLLREYSGSTDLVSLDWKKMKIPHVLPSSEHAWLFKLMQPMK 1087
             S   K  +   E   +E L+REYS STDLVSLDWKKM+IP VL SSEH WLFKLMQPMK
Sbjct: 180  ASVVRKRKDKRSENEMMEELVREYSASTDLVSLDWKKMRIPPVLSSSEHTWLFKLMQPMK 239

Query: 1086 ALLQVKENLKKDMGREPTDTELAETTKMSVPKVRRQIEVGRAARNKLIRHNLRLVLFVIN 907
             LL+VKE L+KD+GREP   ELAE T M+V +V+R +EVGRAARNKLI+HNLRLVLFVIN
Sbjct: 240  GLLEVKEILQKDLGREPNKGELAEATNMTVVQVKRHLEVGRAARNKLIKHNLRLVLFVIN 299

Query: 906  KYFQEFASGSRFQDLCQAGVKGLITAIDRFEPKRRSRLSTYGLFWIRHSIMRSMTLSSFT 727
            KYFQ+FA+G +FQDLCQAGVKGLITAIDRFEP+RR RLSTYGLFWIRH+I+RSMTLSSFT
Sbjct: 300  KYFQDFANGPKFQDLCQAGVKGLITAIDRFEPQRRFRLSTYGLFWIRHAIIRSMTLSSFT 359

Query: 726  RVSFGLESVRVEIQRAKLELTFELEREPTEDEIIEKVGISPERYHEVMRASKPVLSLHAR 547
            RVSFGLESVR EIQ+AKLE+  +L+R PTEDEIIEKVGISPERYHEVMRASKPV SL++R
Sbjct: 360  RVSFGLESVRAEIQKAKLEMLVQLKRMPTEDEIIEKVGISPERYHEVMRASKPVFSLNSR 419

Query: 546  HAITQEEFINGITDTEGVGGDKRRQPAXXXXXXXXXXXXLKPKESMVIRQRYGLDGKGDR 367
            H++TQEEFINGITD +GV GD RR+PA            LKPKES+VIRQRYGLDGKGDR
Sbjct: 420  HSVTQEEFINGITDVDGVDGDNRRKPALLRLAIDDVLDSLKPKESLVIRQRYGLDGKGDR 479

Query: 366  TLGEIGGNLNISREMVRKHEVKALMKLKHQARVDYLRRYIV 244
            TLGEI GNLNISREMVRKHEVKALMKLKH ARVDYLRRYIV
Sbjct: 480  TLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYIV 520


>gb|EXB72455.1| RNA polymerase sigma factor rpoD [Morus notabilis]
          Length = 517

 Score =  607 bits (1565), Expect = e-171
 Identities = 339/522 (64%), Positives = 395/522 (75%), Gaps = 7/522 (1%)
 Frame = -3

Query: 1788 MGVVTVPSSASQTPLGLSARFSTHRSP-LKRPVILAFNTDKTKNTALITNHEPISLPSDT 1612
            MGVVTV SSAS+TPLGLS +FS++RS  LK+P+I+AF  DK+  T L+   + I LP +T
Sbjct: 1    MGVVTVSSSASRTPLGLSLKFSSNRSSVLKKPLIVAFKGDKSNKTVLVAPQDQIILPVET 60

Query: 1611 PKEHKI-LRKSTKSSKRVKAVXXXXXXXXXXXXXDYSEAAAKLENIYKLSSPADISDAED 1435
             KE K  + K+ KSS RVKAV              Y+EAAAKLENI+KLSS    +D ED
Sbjct: 61   RKEVKSRVGKAKKSSNRVKAVATDEASTSTMEVD-YNEAAAKLENIFKLSS----ADVED 115

Query: 1434 TDRLMXXXXRTKKKV-EESDEQVEKE--IFHNVVRSHKK-AKRLNLDXXXXXXXXXXXEM 1267
               L     R + KV  ESDE+  K+      VVR+ KK AKRL+L             +
Sbjct: 116  AVGLTSRGRRRRSKVIGESDERAGKKSTTSDTVVRNRKKKAKRLSLHKRVELKRDKEENV 175

Query: 1266 VISSDGKENNDV-EGGDVERLLREYSGSTDLVSLDWKKMKIPHVLPSSEHAWLFKLMQPM 1090
             +    K    + E   +E+L+REYS STDLVSLDWKKMKIP VLPSSEH WLFKLMQP+
Sbjct: 176  AVVLVRKRRESLNEEEKIEKLVREYSASTDLVSLDWKKMKIPPVLPSSEHTWLFKLMQPL 235

Query: 1089 KALLQVKENLKKDMGREPTDTELAETTKMSVPKVRRQIEVGRAARNKLIRHNLRLVLFVI 910
            K L QV E+L+K +GREPT+ ELAE T +SV +V+R +E GRAARNKLI+HNLRLVLFV+
Sbjct: 236  KQLFQVGEDLQKTLGREPTENELAEATNISVVQVKRHLEAGRAARNKLIKHNLRLVLFVM 295

Query: 909  NKYFQEFASGSRFQDLCQAGVKGLITAIDRFEPKRRSRLSTYGLFWIRHSIMRSMTLSSF 730
            NKYFQ+F +G +FQDLCQAGV+GLITAIDRFEPKRR RLSTYGLFWIRH+I+RSMT+SSF
Sbjct: 296  NKYFQDFTNGPKFQDLCQAGVRGLITAIDRFEPKRRFRLSTYGLFWIRHAIIRSMTVSSF 355

Query: 729  TRVSFGLESVRVEIQRAKLELTFELEREPTEDEIIEKVGISPERYHEVMRASKPVLSLHA 550
            TRVSFGLESVR EIQ+AK+ELTFEL+R PTE+EIIEKVGISPERYHEVMRASKPV+SL++
Sbjct: 356  TRVSFGLESVRAEIQKAKIELTFELKRLPTEEEIIEKVGISPERYHEVMRASKPVISLNS 415

Query: 549  RHAITQEEFINGITDTEGVGGDKRRQPAXXXXXXXXXXXXLKPKESMVIRQRYGLDGKGD 370
            RH  TQEEFIN ITD +GV GD RR+PA            LKPKES+VIRQRYGLDGKGD
Sbjct: 416  RHVTTQEEFINAITDVDGVDGDDRRKPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGD 475

Query: 369  RTLGEIGGNLNISREMVRKHEVKALMKLKHQARVDYLRRYIV 244
            RTLGEI GNLNISREMVRKHEVKALMKLKH ARVDYLRRY+V
Sbjct: 476  RTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYMV 517


>ref|XP_004234180.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform 2 [Solanum
            lycopersicum]
          Length = 487

 Score =  607 bits (1565), Expect = e-171
 Identities = 326/516 (63%), Positives = 383/516 (74%), Gaps = 2/516 (0%)
 Frame = -3

Query: 1788 MGVVTVPSSASQTPLGLSARFSTHRSPLKRPVILAFNTDKTKNTALITNHEPISLPSDTP 1609
            MGVVTV SSAS++PLGLS+RFS    PLKRPVI++F  D TKNT L++  E IS P +T 
Sbjct: 1    MGVVTVSSSASRSPLGLSSRFSARLCPLKRPVIVSFKKDITKNTTLVSPKESISSPIETS 60

Query: 1608 KEH-KILRKSTKSSKRVKAVXXXXXXXXXXXXXDYSEAAAKLENIYKLSSPADISDAEDT 1432
            KE+ K  R+ +K ++RV AV              YSEAAAKLE+IYK S      + E  
Sbjct: 61   KENEKRSRRVSKRTERVHAVTIEAPPSTLELD--YSEAAAKLESIYKRSLETASPNTEVK 118

Query: 1431 DRLMXXXXRTKKKVEESDEQVEKEIFHNVVRSH-KKAKRLNLDXXXXXXXXXXXEMVISS 1255
            D L+    RT+K++ ESDE+ +KE+  NVV++  KK+KRLNLD                 
Sbjct: 119  DHLVKRRPRTRKRIVESDEEAKKEVVDNVVKNRRKKSKRLNLDQRIA------------- 165

Query: 1254 DGKENNDVEGGDVERLLREYSGSTDLVSLDWKKMKIPHVLPSSEHAWLFKLMQPMKALLQ 1075
                           LL+   G+TDL SLDWKKMKIP VLPSSEH WLFKLMQPMKA+LQ
Sbjct: 166  ---------------LLKNKEGATDLASLDWKKMKIPPVLPSSEHTWLFKLMQPMKAILQ 210

Query: 1074 VKENLKKDMGREPTDTELAETTKMSVPKVRRQIEVGRAARNKLIRHNLRLVLFVINKYFQ 895
            VKENL+ D+GREPTD E+AE T M   ++R+++E GRAARNKLI+HNLRLVLFV+NKYFQ
Sbjct: 211  VKENLQNDLGREPTDGEVAEATNMDASELRKKLEAGRAARNKLIKHNLRLVLFVMNKYFQ 270

Query: 894  EFASGSRFQDLCQAGVKGLITAIDRFEPKRRSRLSTYGLFWIRHSIMRSMTLSSFTRVSF 715
            +FA+ SRFQDLCQAGVKGLITAIDRFEP R+ RLSTYGLFWIRH+I+R MT SSFT+V F
Sbjct: 271  DFANASRFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRYMTTSSFTKVPF 330

Query: 714  GLESVRVEIQRAKLELTFELEREPTEDEIIEKVGISPERYHEVMRASKPVLSLHARHAIT 535
            GLES+RVEIQ+AKLEL FEL+R PT+DEII++VG SPERYHEVM+ SKP+ SLHAR+  T
Sbjct: 331  GLESIRVEIQKAKLELLFELQRIPTDDEIIKRVGFSPERYHEVMKVSKPIFSLHARNKTT 390

Query: 534  QEEFINGITDTEGVGGDKRRQPAXXXXXXXXXXXXLKPKESMVIRQRYGLDGKGDRTLGE 355
            QEE INGITD +GV GDKR+QPA            LKPKES+VIRQRYGLDGKGDRTLGE
Sbjct: 391  QEELINGITDVDGVDGDKRKQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGE 450

Query: 354  IGGNLNISREMVRKHEVKALMKLKHQARVDYLRRYI 247
            I GNLNISREMVRKHEVKALMKLKH  RVDY+RRYI
Sbjct: 451  IAGNLNISREMVRKHEVKALMKLKHPTRVDYVRRYI 486


>ref|XP_002513587.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
            gi|223547495|gb|EEF48990.1| RNA polymerase sigma factor
            rpoD, putative [Ricinus communis]
          Length = 501

 Score =  601 bits (1549), Expect = e-169
 Identities = 325/516 (62%), Positives = 389/516 (75%), Gaps = 1/516 (0%)
 Frame = -3

Query: 1788 MGVVTVPSSASQTPLGLSARFSTHRSPLKRPVILAFNTDKTKNTALITNHEPISLPSDTP 1609
            MGVVT  SSA++TPLGLS +FST+RS +KR +++AF  DK  +  L+   E   LP +T 
Sbjct: 1    MGVVTASSSAARTPLGLSLKFSTYRSTVKRSLVVAFKEDKANDIILVPPRERTPLPIETS 60

Query: 1608 KEHKILRKSTKSSKRVKAVXXXXXXXXXXXXXDYSEAAAKLENIYKLSSPADISDAEDTD 1429
            K  K   +  K+++ V +              DY+EAAAKLENIYKLS   D SD  D +
Sbjct: 61   KGKK---RRGKTNREVSS---------GTLEVDYNEAAAKLENIYKLSPATDTSDV-DIN 107

Query: 1428 RLMXXXXRTKKKVEESDEQVEKEIFHNVVRSH-KKAKRLNLDXXXXXXXXXXXEMVISSD 1252
             L+    + K+K  E DE+ E      +VR+  KK KRL+LD           E+V    
Sbjct: 108  GLIRKGRQRKRKTGEGDEKAENRTSRTIVRNRAKKTKRLSLDKRIALKKNEEEEVVGPIR 167

Query: 1251 GKENNDVEGGDVERLLREYSGSTDLVSLDWKKMKIPHVLPSSEHAWLFKLMQPMKALLQV 1072
             K+++  +   +E L+R YS ST+LVSLDW+KMKIP VLPS+EHAWLFKLMQPMK LL V
Sbjct: 168  KKKDSKDDNEKIEELVRTYSASTNLVSLDWRKMKIPPVLPSTEHAWLFKLMQPMKTLLPV 227

Query: 1071 KENLKKDMGREPTDTELAETTKMSVPKVRRQIEVGRAARNKLIRHNLRLVLFVINKYFQE 892
            K +L+K++GR+PTD ELAE T M+V KVR+Q+EVGRAARNKLI+HNLRLV+FV+NKYFQ+
Sbjct: 228  KADLQKNLGRDPTDGELAEATNMNVEKVRKQLEVGRAARNKLIKHNLRLVMFVMNKYFQD 287

Query: 891  FASGSRFQDLCQAGVKGLITAIDRFEPKRRSRLSTYGLFWIRHSIMRSMTLSSFTRVSFG 712
            FA+G RFQDLCQAGVKGLITAIDRFEP+RR +LSTY LFWIRH+I+RSMTLSSFT+VSFG
Sbjct: 288  FANGPRFQDLCQAGVKGLITAIDRFEPQRRFQLSTYSLFWIRHAIIRSMTLSSFTKVSFG 347

Query: 711  LESVRVEIQRAKLELTFELEREPTEDEIIEKVGISPERYHEVMRASKPVLSLHARHAITQ 532
            LESVR EIQ+AKLEL  EL+R PTE+EIIE+VGIS ERYHEV+RA+KP LSLHARHA+TQ
Sbjct: 348  LESVRTEIQKAKLELLIELQRRPTEEEIIERVGISAERYHEVIRAAKPALSLHARHAVTQ 407

Query: 531  EEFINGITDTEGVGGDKRRQPAXXXXXXXXXXXXLKPKESMVIRQRYGLDGKGDRTLGEI 352
            EEFINGITD +  GGD RRQPA            LKPKES+VIRQRYGLDGKGDRTLGEI
Sbjct: 408  EEFINGITDID--GGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEI 465

Query: 351  GGNLNISREMVRKHEVKALMKLKHQARVDYLRRYIV 244
             GNLNISREMVRK+EVKALMKLKH ARVDYLRRY+V
Sbjct: 466  AGNLNISREMVRKYEVKALMKLKHPARVDYLRRYVV 501


>ref|XP_003541542.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X1 [Glycine max]
            gi|571496981|ref|XP_006593757.1| PREDICTED: RNA
            polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X2 [Glycine max]
          Length = 512

 Score =  600 bits (1546), Expect = e-169
 Identities = 325/517 (62%), Positives = 393/517 (76%), Gaps = 2/517 (0%)
 Frame = -3

Query: 1788 MGVVTVPSSASQTPLGLSARFSTHRSPLKRPVILAFNTDKTKNTALITNHEPISLPSDTP 1609
            MGV+TV +SA++TPL L+ R  +H+   KRP+ILAF  +K+  T L++  E I LP +T 
Sbjct: 1    MGVITVSTSAARTPLRLNTRLISHQQVHKRPIILAFKGNKSNKTTLVSPQEKIPLPLETA 60

Query: 1608 KEH-KILRKSTKSSKRVKAVXXXXXXXXXXXXXDYSEAAAKLENIYKLSSPADISDAEDT 1432
            K+H K + K+++S KRV+AV              Y+EAAAKLENIYKLS  +D  + ED 
Sbjct: 61   KKHQKRVGKTSESLKRVRAVSTVETSPCTLDVD-YNEAAAKLENIYKLSPVSDTCNVEDI 119

Query: 1431 DRLMXXXXRTKKKVEESDEQVEKEIFHNVVRS-HKKAKRLNLDXXXXXXXXXXXEMVISS 1255
            D  +    R +KKV E  +    +   NVVR+ +KKAKRL+LD           E++  +
Sbjct: 120  DSKIERVLRRRKKVSEERDDGNCD---NVVRNQNKKAKRLSLDKRIALKNNAKEEVIDQT 176

Query: 1254 DGKENNDVEGGDVERLLREYSGSTDLVSLDWKKMKIPHVLPSSEHAWLFKLMQPMKALLQ 1075
              K N      +++ L+R+YS STDLVS+DWKKMKIP VLPSSEHAWLFKLMQPMKALLQ
Sbjct: 177  QKKRNVKNRVQNIDVLIRDYSASTDLVSMDWKKMKIPPVLPSSEHAWLFKLMQPMKALLQ 236

Query: 1074 VKENLKKDMGREPTDTELAETTKMSVPKVRRQIEVGRAARNKLIRHNLRLVLFVINKYFQ 895
             KE+LK ++ +E T  ELA+ T MS+ +VR+ IEVGRAARNKLI+HNLRLVLFVINKYFQ
Sbjct: 237  AKEDLK-EVDKEITGGELADATNMSIIQVRKAIEVGRAARNKLIKHNLRLVLFVINKYFQ 295

Query: 894  EFASGSRFQDLCQAGVKGLITAIDRFEPKRRSRLSTYGLFWIRHSIMRSMTLSSFTRVSF 715
            +FASG RFQDLCQAGVKGLITAIDRFEPKRR +LSTY LFWIRHSI+RS+TLSSFTRV F
Sbjct: 296  DFASGPRFQDLCQAGVKGLITAIDRFEPKRRLQLSTYSLFWIRHSIVRSITLSSFTRVPF 355

Query: 714  GLESVRVEIQRAKLELTFELEREPTEDEIIEKVGISPERYHEVMRASKPVLSLHARHAIT 535
            GLE VRV+IQR KL+LTFEL+R PTE+E++E++GIS ERYHEVM+ASKP+LSLH+RH  T
Sbjct: 356  GLERVRVDIQRTKLKLTFELQRSPTEEELVERIGISLERYHEVMKASKPILSLHSRHITT 415

Query: 534  QEEFINGITDTEGVGGDKRRQPAXXXXXXXXXXXXLKPKESMVIRQRYGLDGKGDRTLGE 355
            QEE+INGITD +GV GD RRQ A            LKPKES+VIRQRYGLDGKGDRTLGE
Sbjct: 416  QEEYINGITDVDGVNGDNRRQLAVLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGE 475

Query: 354  IGGNLNISREMVRKHEVKALMKLKHQARVDYLRRYIV 244
            I GNLNISRE+VRKHEVKALMKLKH AR+DYLRRY+V
Sbjct: 476  IAGNLNISREIVRKHEVKALMKLKHPARLDYLRRYVV 512


>ref|NP_001254001.1| RNA polymerase sigma factor rpoD-like [Glycine max]
            gi|382365028|dbj|BAM05477.1| sigma-like factor 5A
            [Glycine max]
          Length = 512

 Score =  590 bits (1521), Expect = e-166
 Identities = 320/517 (61%), Positives = 390/517 (75%), Gaps = 2/517 (0%)
 Frame = -3

Query: 1788 MGVVTVPSSASQTPLGLSARFSTHRSPLKRPVILAFNTDKTKNTALITNHEPISLPSDTP 1609
            MGVVTV + A++TPL L+ R ++H+   KRP+I+AF  +K    AL++  E I LP +T 
Sbjct: 1    MGVVTVSTLAARTPLRLNTRLTSHQQVHKRPLIVAFKGNKLNKAALVSPQEQIPLPIETA 60

Query: 1608 K-EHKILRKSTKSSKRVKAVXXXXXXXXXXXXXDYSEAAAKLENIYKLSSPADISDAEDT 1432
            K + K + K+++S KRV+AV              Y+EAAAKLENIYKLS  +D  + ED 
Sbjct: 61   KKDQKRVGKTSESLKRVRAVSIVETSPCTLDMD-YNEAAAKLENIYKLSPVSDTCNMEDI 119

Query: 1431 DRLMXXXXRTKKKVEESDEQVEKEIFHNVVRS-HKKAKRLNLDXXXXXXXXXXXEMVISS 1255
            D  +      ++KV    +    +I   VVR+ +KKAKRL+LD           E++  +
Sbjct: 120  DSKVERVLWRRRKVGNEHDDENCDI---VVRNQNKKAKRLSLDKRITLKNNAKEEVIDQT 176

Query: 1254 DGKENNDVEGGDVERLLREYSGSTDLVSLDWKKMKIPHVLPSSEHAWLFKLMQPMKALLQ 1075
                N      +++ L+R+YS STDLVS+DWKKMKIP VLPSSEHAWLFKLMQPMKALLQ
Sbjct: 177  QKIRNVKNRVQNIDVLIRDYSASTDLVSMDWKKMKIPAVLPSSEHAWLFKLMQPMKALLQ 236

Query: 1074 VKENLKKDMGREPTDTELAETTKMSVPKVRRQIEVGRAARNKLIRHNLRLVLFVINKYFQ 895
             KE+L+  +G+E TD ELA+ T MS+ +VR+ IEVGRAARNKLI+HNLRLVLFVI+KYFQ
Sbjct: 237  AKEDLQS-VGKEITDGELADATNMSIIQVRKAIEVGRAARNKLIKHNLRLVLFVISKYFQ 295

Query: 894  EFASGSRFQDLCQAGVKGLITAIDRFEPKRRSRLSTYGLFWIRHSIMRSMTLSSFTRVSF 715
            +FASG RFQDLCQAGVKGLITAIDRFEPKRR +LSTY LFWIRHSI+RS+TLSSFTRV F
Sbjct: 296  DFASGRRFQDLCQAGVKGLITAIDRFEPKRRLQLSTYSLFWIRHSIVRSITLSSFTRVPF 355

Query: 714  GLESVRVEIQRAKLELTFELEREPTEDEIIEKVGISPERYHEVMRASKPVLSLHARHAIT 535
            GLE VRV+IQR KL+LTFEL+R PTE+E++E++GISPERY+EVM+ASKP+LSLH+RH  T
Sbjct: 356  GLERVRVDIQRTKLKLTFELQRSPTEEELVERIGISPERYYEVMKASKPILSLHSRHITT 415

Query: 534  QEEFINGITDTEGVGGDKRRQPAXXXXXXXXXXXXLKPKESMVIRQRYGLDGKGDRTLGE 355
            QEE+INGITD +GV GD RRQ A            LKPKES+VIRQRYGLDGKGDRTLGE
Sbjct: 416  QEEYINGITDVDGVNGDNRRQLAVLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGE 475

Query: 354  IGGNLNISREMVRKHEVKALMKLKHQARVDYLRRYIV 244
            I GNLNISREMVRKHEVKALMKLKH AR+DYLRRY+V
Sbjct: 476  IAGNLNISREMVRKHEVKALMKLKHPARLDYLRRYVV 512


>ref|XP_006422121.1| hypothetical protein CICLE_v10004760mg [Citrus clementina]
            gi|567858878|ref|XP_006422122.1| hypothetical protein
            CICLE_v10004760mg [Citrus clementina]
            gi|568874930|ref|XP_006490565.1| PREDICTED: RNA
            polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X1 [Citrus
            sinensis] gi|568874932|ref|XP_006490566.1| PREDICTED: RNA
            polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X2 [Citrus
            sinensis] gi|568874934|ref|XP_006490567.1| PREDICTED: RNA
            polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X3 [Citrus
            sinensis] gi|557523994|gb|ESR35361.1| hypothetical
            protein CICLE_v10004760mg [Citrus clementina]
            gi|557523995|gb|ESR35362.1| hypothetical protein
            CICLE_v10004760mg [Citrus clementina]
          Length = 513

 Score =  589 bits (1519), Expect = e-165
 Identities = 318/517 (61%), Positives = 386/517 (74%), Gaps = 2/517 (0%)
 Frame = -3

Query: 1788 MGVVTVPSSASQTPLGLSARFSTHRSPLKRPVILAFNTDKTKNTALITNHEPISLPSDTP 1609
            MGVVT+ SS +++P+GLS    +HRS  KRP+I+AF  DK+ N AL +  E I LP +TP
Sbjct: 1    MGVVTISSSPARSPIGLST--ISHRSTSKRPLIVAFKADKSNNQALFSPQEQIPLPIETP 58

Query: 1608 KEHKILRK-STKSSKRVKAVXXXXXXXXXXXXXDYSEAAAKLENIYKLSSPADISDAEDT 1432
            K H+  R+ S K  +RVK V              Y+EAAAKLENIYKLS     S+ +  
Sbjct: 59   KRHQKRRENSRKRLERVKGVFSDEASPCTLDVD-YNEAAAKLENIYKLSPAVTTSEVKYA 117

Query: 1431 DRLMXXXXRTKKKVEESDEQVEKEIFHNVVRSH-KKAKRLNLDXXXXXXXXXXXEMVISS 1255
            D ++    + +K++ E +++ +      VVR+  K+ KRL+LD           ++V  +
Sbjct: 118  DGVVKRGRQRRKRIGEVEKKSDDVSGKPVVRNQVKRPKRLSLDKRIELRKNEDEKVVTKT 177

Query: 1254 DGKENNDVEGGDVERLLREYSGSTDLVSLDWKKMKIPHVLPSSEHAWLFKLMQPMKALLQ 1075
               ++ D E   +E+L+REYS STDLVSLDWKKMKIP VL S+EH WLFKLMQPMK  +Q
Sbjct: 178  RKTDSKD-EHEKIEKLVREYSYSTDLVSLDWKKMKIPPVLSSTEHTWLFKLMQPMKVFVQ 236

Query: 1074 VKENLKKDMGREPTDTELAETTKMSVPKVRRQIEVGRAARNKLIRHNLRLVLFVINKYFQ 895
            VKE L+KD+GREPTD ELAE T MS  +V++ +EVGRAARNKLI+HNLRLVLFVI KYFQ
Sbjct: 237  VKEQLQKDLGREPTDVELAEATNMSAAQVKKCLEVGRAARNKLIKHNLRLVLFVIKKYFQ 296

Query: 894  EFASGSRFQDLCQAGVKGLITAIDRFEPKRRSRLSTYGLFWIRHSIMRSMTLSSFTRVSF 715
            +FA+G RFQDLCQAGVKGLITAIDRFEPKRR RLSTYGLFWIRH+I+RSMT+SSFTRV F
Sbjct: 297  DFANGPRFQDLCQAGVKGLITAIDRFEPKRRFRLSTYGLFWIRHAIIRSMTVSSFTRVPF 356

Query: 714  GLESVRVEIQRAKLELTFELEREPTEDEIIEKVGISPERYHEVMRASKPVLSLHARHAIT 535
            GLESVR EIQRAKLEL FEL+R PT++EII+ V ISPERY EVM+ASKP+LSLH+RH +T
Sbjct: 357  GLESVRGEIQRAKLELLFELKRVPTDEEIIQGVNISPERYREVMKASKPILSLHSRHGVT 416

Query: 534  QEEFINGITDTEGVGGDKRRQPAXXXXXXXXXXXXLKPKESMVIRQRYGLDGKGDRTLGE 355
            QEEFINGITD +GV  + +RQPA            LKPKES+VIRQR+GLDGKGDRTLGE
Sbjct: 417  QEEFINGITDVDGVENENQRQPALLRLALDDVLDSLKPKESLVIRQRFGLDGKGDRTLGE 476

Query: 354  IGGNLNISREMVRKHEVKALMKLKHQARVDYLRRYIV 244
            I GNLNISREMVRKHEVK LMKLKH  RVDYLR+++V
Sbjct: 477  IAGNLNISREMVRKHEVKGLMKLKHPTRVDYLRQHMV 513


>gb|EYU19623.1| hypothetical protein MIMGU_mgv1a020453mg [Mimulus guttatus]
          Length = 515

 Score =  585 bits (1507), Expect = e-164
 Identities = 317/517 (61%), Positives = 389/517 (75%), Gaps = 3/517 (0%)
 Frame = -3

Query: 1788 MGVVTVPSSASQTPLGLSARFSTHRSPLKRPVILAFNTDKTKNTALITNHEPISLPSDTP 1609
            MGVVTV +SAS+T LGL+ R+ T  S L+RPV+ AF  DK K   LI+  E  +LP +  
Sbjct: 1    MGVVTVSTSASRTSLGLNERYLTRVSILRRPVVFAFKNDKIKKIVLISPRESAALPLEAT 60

Query: 1608 KEH-KILRKSTKSSKRVKAVXXXXXXXXXXXXXDYSEAAAKLENIYKLSSPADISDAEDT 1432
            K++ K LRK  K ++RV AV              Y+EAAAKLE I+K S   +IS  E  
Sbjct: 61   KDNEKRLRKVKKRAERVNAVSTDEAPPSTIDLD-YNEAAAKLEYIFKQSPTVEISVDEVK 119

Query: 1431 DRLMXXXXRTKKKVEESDEQVEKEIFHNVVRSHK-KAKRLNLDXXXXXXXXXXXEMV-IS 1258
            D +     + +K+ E +DE   ++I  NVVRS + K +RLNL+           E   I 
Sbjct: 120  D-VRVKRRQPRKRTEYADEA--EKIADNVVRSRRSKDRRLNLEKRIALRTKKEDESTAIF 176

Query: 1257 SDGKENNDVEGGDVERLLREYSGSTDLVSLDWKKMKIPHVLPSSEHAWLFKLMQPMKALL 1078
               K   + E   ++RL+R+YS S+DLVSLDWKKMKIP VLPS+EH WLFKLMQP+KA+L
Sbjct: 177  QRRKTGKNDEDEKIDRLVRDYSASSDLVSLDWKKMKIPPVLPSAEHVWLFKLMQPVKAIL 236

Query: 1077 QVKENLKKDMGREPTDTELAETTKMSVPKVRRQIEVGRAARNKLIRHNLRLVLFVINKYF 898
             VKE ++ ++GREPTD +LA    M   ++R+Q+E+GRAARNKLI+HNLRLVLFV+NKYF
Sbjct: 237  DVKETIENNLGREPTDEKLATAINMDTVQLRKQLEIGRAARNKLIKHNLRLVLFVMNKYF 296

Query: 897  QEFASGSRFQDLCQAGVKGLITAIDRFEPKRRSRLSTYGLFWIRHSIMRSMTLSSFTRVS 718
            Q+F++GSRFQDLCQAG KGLITAIDRFEPKR+ RLSTYGLFWIRHSI+RSMTLSSFT+VS
Sbjct: 297  QDFSNGSRFQDLCQAGAKGLITAIDRFEPKRKLRLSTYGLFWIRHSIIRSMTLSSFTKVS 356

Query: 717  FGLESVRVEIQRAKLELTFELEREPTEDEIIEKVGISPERYHEVMRASKPVLSLHARHAI 538
            FGLESVRVEI++AKLEL FEL+R PT++EI+ +VGIS ERYHEVMR SKP++SLHARH++
Sbjct: 357  FGLESVRVEIRKAKLELMFELKRLPTDEEIVGRVGISQERYHEVMRVSKPIISLHARHSV 416

Query: 537  TQEEFINGITDTEGVGGDKRRQPAXXXXXXXXXXXXLKPKESMVIRQRYGLDGKGDRTLG 358
            TQEEFINGITD +GV GD+R+QPA            LKPKE++VIRQRYGLDGKGDRTLG
Sbjct: 417  TQEEFINGITDVDGVEGDRRKQPALLRLALDDVLDSLKPKENLVIRQRYGLDGKGDRTLG 476

Query: 357  EIGGNLNISREMVRKHEVKALMKLKHQARVDYLRRYI 247
            EI GNLNISREMVRK+EVKALMKLKH+ARVDYLRRY+
Sbjct: 477  EIAGNLNISREMVRKYEVKALMKLKHRARVDYLRRYV 513


>ref|XP_004149458.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Cucumis sativus]
          Length = 514

 Score =  582 bits (1500), Expect = e-163
 Identities = 322/522 (61%), Positives = 381/522 (72%), Gaps = 7/522 (1%)
 Frame = -3

Query: 1788 MGVVTVPSSASQTPLGLSARFSTHRSPLKRPVILAFNTDKTKNTALITNHEPISLPSDTP 1609
            MGVVTV S+A++TP  L  +FS H S LKRP I+AF  DK  NT L++ HE ++LP ++ 
Sbjct: 1    MGVVTVSSAAARTPFRLGVKFSNHSSTLKRPSIVAFKADKHTNTTLVSPHEQVTLPVESN 60

Query: 1608 KEHKILRKST-KSSKRVKAVXXXXXXXXXXXXXDYSEAAAKLENIYKLSSPADISDAEDT 1432
               K    +T K  KRVKAV              Y+EAAAKLENI+KLS   + SD E  
Sbjct: 61   NRRKKRSGNTSKPLKRVKAVLIDEATPCSLDLD-YNEAAAKLENIFKLSPMTEDSDKECK 119

Query: 1431 DRLMXXXXRTKKKVEESDEQVEKEIFHNVVRSH-KKAKRLNLDXXXXXXXXXXXEMVI-- 1261
            D          K+ ++  ++        +VR+  K+ KRL+LD           + V   
Sbjct: 120  D-------GRSKRGQKRSKKSANRPGDGIVRNQTKRIKRLDLDKRIALKNKKEGKAVALL 172

Query: 1260 --SSDGK-ENNDVEGGDVERLLREYSGSTDLVSLDWKKMKIPHVLPSSEHAWLFKLMQPM 1090
                D K E ++++  +++RL+R+YS STDLVSLDWKKMKIP VLPSSEH  LFKL+QPM
Sbjct: 173  RKQKDTKNEADEIDDDEIDRLVRDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLVQPM 232

Query: 1089 KALLQVKENLKKDMGREPTDTELAETTKMSVPKVRRQIEVGRAARNKLIRHNLRLVLFVI 910
            KAL++V+E L+K +GREPT+ ELA  T M+V +VRRQ+EVGRAARNKLI+HNLRLVLFVI
Sbjct: 233  KALVEVQEELQKGLGREPTEGELANATNMNVIQVRRQLEVGRAARNKLIKHNLRLVLFVI 292

Query: 909  NKYFQEFASGSRFQDLCQAGVKGLITAIDRFEPKRRSRLSTYGLFWIRHSIMRSMTLSSF 730
            NKYF++FASG +FQDLCQAGVKGLITAIDRFEPKR+ RLSTY LFWIRH+I+RSMTLSSF
Sbjct: 293  NKYFEDFASGPKFQDLCQAGVKGLITAIDRFEPKRKFRLSTYALFWIRHAIIRSMTLSSF 352

Query: 729  TRVSFGLESVRVEIQRAKLELTFELEREPTEDEIIEKVGISPERYHEVMRASKPVLSLHA 550
            TRVSFGL+SVRVEIQRAKLEL  EL R PTE EI  KVGIS ERY EVMRA+KPV SLH+
Sbjct: 353  TRVSFGLDSVRVEIQRAKLELLCELHRLPTEGEITAKVGISQERYLEVMRATKPVYSLHS 412

Query: 549  RHAITQEEFINGITDTEGVGGDKRRQPAXXXXXXXXXXXXLKPKESMVIRQRYGLDGKGD 370
            RH+ T EE INGITD EG GGD RRQPA            LKPKES+VIRQRYGLDGKG+
Sbjct: 413  RHSTTSEELINGITDVEGTGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGN 472

Query: 369  RTLGEIGGNLNISREMVRKHEVKALMKLKHQARVDYLRRYIV 244
            RTLGEI GNLNISREMVRKHEVKALMKLKH ARVDYLRRY++
Sbjct: 473  RTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYLI 514


>ref|XP_003602198.1| RNA polymerase sigma factor rpoD [Medicago truncatula]
            gi|355491246|gb|AES72449.1| RNA polymerase sigma factor
            rpoD [Medicago truncatula]
          Length = 514

 Score =  582 bits (1500), Expect = e-163
 Identities = 318/517 (61%), Positives = 378/517 (73%), Gaps = 2/517 (0%)
 Frame = -3

Query: 1788 MGVVTVPSSASQTPLGLSARFSTHRSPLKRPVILAFNTDKTKNTALITNHEPISLPSDTP 1609
            MGVVTV SSA++TPLGL+A+FSTH   LKRP+ +AF  DK  +TAL+   E I       
Sbjct: 1    MGVVTVSSSAARTPLGLNAKFSTHHPVLKRPLTVAFKGDKQNDTALVATQEKIPTQVKPA 60

Query: 1608 KEHKI-LRKSTKSSKRVKAVXXXXXXXXXXXXXDYSEAAAKLENIYKLSSPADISDAEDT 1432
            K HK  + K+ K  K+ +AV              Y+EAAA LENIYKLS   DI DA+  
Sbjct: 61   KTHKKRIAKTNKLPKKPRAVCTEETFPSSLDVD-YNEAAAILENIYKLSPTTDICDADYI 119

Query: 1431 DRLMXXXXRTKKKVEESDEQVEKEIFHNVVRSHK-KAKRLNLDXXXXXXXXXXXEMVISS 1255
            +R +    R  KK+   D   E      VVR+ K KAKR+NLD           E VI +
Sbjct: 120  ERKIKRVSRRGKKI--GDVSKEDSNSDRVVRNQKTKAKRMNLDERIALKTSENSEDVIPT 177

Query: 1254 DGKENNDVEGGDVERLLREYSGSTDLVSLDWKKMKIPHVLPSSEHAWLFKLMQPMKALLQ 1075
              K N       ++ LLREYS   DLVSLDWKKMKIP VLPSSEHA+LFKLMQPMKALLQ
Sbjct: 178  RKKRNPRSRVEKIDELLREYSVPADLVSLDWKKMKIPPVLPSSEHAFLFKLMQPMKALLQ 237

Query: 1074 VKENLKKDMGREPTDTELAETTKMSVPKVRRQIEVGRAARNKLIRHNLRLVLFVINKYFQ 895
            VK++L+K++ REPT+ E+A+ T M   +V++ IEVGRAARNKLI+HNLRLVLFVIN+YF 
Sbjct: 238  VKDDLQKELEREPTEDEIADATNMHTTQVKKAIEVGRAARNKLIKHNLRLVLFVINRYFS 297

Query: 894  EFASGSRFQDLCQAGVKGLITAIDRFEPKRRSRLSTYGLFWIRHSIMRSMTLSSFTRVSF 715
            +FA+  RFQDLCQAGVKGLIT+IDRFEP RR RLSTY LFWIRH+I+RSMTL+SF+RV F
Sbjct: 298  DFANSPRFQDLCQAGVKGLITSIDRFEPNRRFRLSTYSLFWIRHAIIRSMTLASFSRVPF 357

Query: 714  GLESVRVEIQRAKLELTFELEREPTEDEIIEKVGISPERYHEVMRASKPVLSLHARHAIT 535
            GLESVR EI+RAK+EL+F+L+R PTE+EIIEKV +SPERY +VM+ASKP+LSLH+RH  T
Sbjct: 358  GLESVRAEIRRAKIELSFQLQRSPTEEEIIEKVHVSPERYRDVMKASKPLLSLHSRHLTT 417

Query: 534  QEEFINGITDTEGVGGDKRRQPAXXXXXXXXXXXXLKPKESMVIRQRYGLDGKGDRTLGE 355
            QEEFING+ D  GV GD RRQPA            LKPKE++VIRQR+GLDGKGDRTLGE
Sbjct: 418  QEEFINGVVDDGGVDGDNRRQPALLRLALDDVLDSLKPKENLVIRQRFGLDGKGDRTLGE 477

Query: 354  IGGNLNISREMVRKHEVKALMKLKHQARVDYLRRYIV 244
            I  NLNISREMVRKHEVKALMKLKH AR+DYLRRY+V
Sbjct: 478  IASNLNISREMVRKHEVKALMKLKHSARLDYLRRYVV 514


>ref|XP_006581623.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X2 [Glycine max]
          Length = 507

 Score =  580 bits (1495), Expect = e-163
 Identities = 320/520 (61%), Positives = 389/520 (74%), Gaps = 5/520 (0%)
 Frame = -3

Query: 1788 MGVVTVPSSASQTPLGLSARFSTHRSPLKRPVILAFNTDKTKNTALITNHEPISLPSDTP 1609
            MGVVTV SSA++TPLGL+ +F  +R  LKRP+I+AF  DK  ++AL+   E I +P +T 
Sbjct: 1    MGVVTVSSSAARTPLGLNTKFCNNR--LKRPLIVAFKGDKHNDSALVATQEKIPVPVETA 58

Query: 1608 K--EHKILRKSTKSSKRVKAVXXXXXXXXXXXXXDYSEAAAKLENIYKLSSPADISDAED 1435
            K  + K + K+ K  KR  +              DY+EAAA LEN+YKLS  +D ++  D
Sbjct: 59   KKTQKKRIGKTNKLPKRESS--------PSSMDVDYNEAAAMLENLYKLSPASDNAECID 110

Query: 1434 TDRLMXXXXRTKKKVEESDEQVEKEIFHNVVRS---HKKAKRLNLDXXXXXXXXXXXEMV 1264
              ++     R KK V+ES+E+  K  +  VVR+   +KK KRLNLD           + V
Sbjct: 111  -GKIKRVSRRGKKVVDESEEKELKGDW--VVRNQNKNKKPKRLNLDQRISLKNNKSGDEV 167

Query: 1263 ISSDGKENNDVEGGDVERLLREYSGSTDLVSLDWKKMKIPHVLPSSEHAWLFKLMQPMKA 1084
            I +  K N   +   +E L+REYS STD VS+DWK+M+IP VL SSEHAWLFKLMQPMKA
Sbjct: 168  IPTRKKRNVGNKIEKIEELIREYSVSTDFVSMDWKRMRIPPVLSSSEHAWLFKLMQPMKA 227

Query: 1083 LLQVKENLKKDMGREPTDTELAETTKMSVPKVRRQIEVGRAARNKLIRHNLRLVLFVINK 904
            LLQVKE+L++++ REP D ELA+ T MS+ +VR+ I+VG+AARNKLI+HNLRLVLFVINK
Sbjct: 228  LLQVKEDLQQELTREPADGELADATNMSITQVRKAIDVGQAARNKLIKHNLRLVLFVINK 287

Query: 903  YFQEFASGSRFQDLCQAGVKGLITAIDRFEPKRRSRLSTYGLFWIRHSIMRSMTLSSFTR 724
            YF +FASG RFQDLCQAGVKGLITAIDRFEP RR RLSTY LFWIRH+I+RSMTLS+FTR
Sbjct: 288  YFTDFASGPRFQDLCQAGVKGLITAIDRFEPNRRFRLSTYSLFWIRHAIIRSMTLSNFTR 347

Query: 723  VSFGLESVRVEIQRAKLELTFELEREPTEDEIIEKVGISPERYHEVMRASKPVLSLHARH 544
            V FGLESVR EIQ+AK ELTFEL+R PTE+EIIE+V ISPERYH+V++ASK +LSL++RH
Sbjct: 348  VPFGLESVRAEIQKAKTELTFELQRSPTEEEIIERVHISPERYHDVIKASKSILSLNSRH 407

Query: 543  AITQEEFINGITDTEGVGGDKRRQPAXXXXXXXXXXXXLKPKESMVIRQRYGLDGKGDRT 364
              TQEEFINGI D +GV GD R+QPA            LKPKES+VIRQR+GLDGKGDRT
Sbjct: 408  TTTQEEFINGIVDDDGVNGDNRKQPALLRLALDDVLDSLKPKESLVIRQRFGLDGKGDRT 467

Query: 363  LGEIGGNLNISREMVRKHEVKALMKLKHQARVDYLRRYIV 244
            LGEI GNLNISREMVRKHEVKALMKLKH AR+DYLRRY+V
Sbjct: 468  LGEIAGNLNISREMVRKHEVKALMKLKHSARLDYLRRYVV 507


>ref|XP_006578934.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Glycine max]
          Length = 509

 Score =  580 bits (1495), Expect = e-163
 Identities = 320/521 (61%), Positives = 383/521 (73%), Gaps = 6/521 (1%)
 Frame = -3

Query: 1788 MGVVTVPSSASQTPLGLSARFSTHRSPLKRPVILAFNTDKTKNTALITNHEPISLPSDTP 1609
            MGVVTV  SAS+TPLG + +FSTHR  LKRP+I+AF  DK  ++AL+   E I +P +T 
Sbjct: 1    MGVVTVSGSASRTPLGFNTKFSTHR--LKRPLIVAFKGDKHNDSALVATQEKIPVPVETA 58

Query: 1608 K--EHKILRKSTKSSKRVKAVXXXXXXXXXXXXXDYSEAAAKLENIYKLSSPADISDAED 1435
            K  + K + KS K  KR  +              DY+EAAA LENIYKLS  +   +AE 
Sbjct: 59   KKTQKKRIGKSNKLPKRESS--------PSSMDVDYNEAAAMLENIYKLSPASHTGNAEC 110

Query: 1434 TD-RLMXXXXRTKKKVEESDEQVEKEIFHNVVR---SHKKAKRLNLDXXXXXXXXXXXEM 1267
             D ++     R KK V+ES+E+  K     VVR    +KKAKRL LD           + 
Sbjct: 111  IDDKIKRVSRRGKKVVDESEEKELKG--DRVVRRQNKNKKAKRLTLDQRISLKNNKRGDE 168

Query: 1266 VISSDGKENNDVEGGDVERLLREYSGSTDLVSLDWKKMKIPHVLPSSEHAWLFKLMQPMK 1087
            VI +  K N       +E L+REYS S D +S+DWK+M+IP VL SSEHAWLFKLMQPMK
Sbjct: 169  VIPTRKKRNFRNRIEKIEELIREYSVSNDFISMDWKRMRIPPVLSSSEHAWLFKLMQPMK 228

Query: 1086 ALLQVKENLKKDMGREPTDTELAETTKMSVPKVRRQIEVGRAARNKLIRHNLRLVLFVIN 907
            ALLQVKE+L+K++ REP D ELA+ T MS+ +V++ I+VG+AARNKLI+HNLRLVLFVIN
Sbjct: 229  ALLQVKEDLQKELAREPADGELADATNMSITQVKKAIDVGQAARNKLIKHNLRLVLFVIN 288

Query: 906  KYFQEFASGSRFQDLCQAGVKGLITAIDRFEPKRRSRLSTYGLFWIRHSIMRSMTLSSFT 727
            KYF +FASG RFQDLCQAGVKGLITAIDRFEP RR RLSTY LFWIRH+I+RSMTLSSF 
Sbjct: 289  KYFTDFASGPRFQDLCQAGVKGLITAIDRFEPNRRFRLSTYSLFWIRHAIIRSMTLSSFI 348

Query: 726  RVSFGLESVRVEIQRAKLELTFELEREPTEDEIIEKVGISPERYHEVMRASKPVLSLHAR 547
            RV FGLESVR EIQ+AK ELTF+L+R PTE+EIIE+V ISPERYH++++ASK +LSL++R
Sbjct: 349  RVPFGLESVRAEIQKAKTELTFKLQRSPTEEEIIERVHISPERYHDIIKASKSILSLNSR 408

Query: 546  HAITQEEFINGITDTEGVGGDKRRQPAXXXXXXXXXXXXLKPKESMVIRQRYGLDGKGDR 367
            H  TQEEFINGI D +GV GD R+QPA            LKPKES+VIRQR+GLDGKGDR
Sbjct: 409  HTTTQEEFINGIVDDDGVNGDNRKQPALLRLALDDVLDSLKPKESLVIRQRFGLDGKGDR 468

Query: 366  TLGEIGGNLNISREMVRKHEVKALMKLKHQARVDYLRRYIV 244
            TLGEI GNLNISREMVRKHEVKALMKL H AR+DYLRRY+V
Sbjct: 469  TLGEIAGNLNISREMVRKHEVKALMKLNHSARLDYLRRYVV 509


>ref|XP_004166500.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Cucumis sativus]
          Length = 515

 Score =  578 bits (1489), Expect = e-162
 Identities = 321/523 (61%), Positives = 378/523 (72%), Gaps = 8/523 (1%)
 Frame = -3

Query: 1788 MGVVTVPSSASQTPLGLSARFSTHRSPLKRPVILAFNTDKTKNTALITNHEPISLPSDTP 1609
            MGVVTV S+A++TP  L  +FS H S LKRP I+AF  DK  NT L++ HE ++LP ++ 
Sbjct: 1    MGVVTVSSAAARTPFRLGVKFSNHSSTLKRPSIVAFKADKHTNTTLVSPHEQVTLPVESN 60

Query: 1608 KEHKILRKST-KSSKRVKAVXXXXXXXXXXXXXDYSEAAAKLENIYKLSSPADISDAEDT 1432
               K    +T K  KRVKAV              Y+EAAAKLENI+KLS   + SD E  
Sbjct: 61   NRRKKRSGNTSKPLKRVKAVLIDEATPCSLDLD-YNEAAAKLENIFKLSPMTEDSDKECK 119

Query: 1431 DRLMXXXXRTKKKVEESDEQVEKEIFHNVVRSH-KKAKRLNLDXXXXXXXXXXXEM---- 1267
            D          K+ ++  ++        +VR+  K+ KRL+LD           +     
Sbjct: 120  D-------GRSKRGQKRSKKSANRPGDGIVRNQTKRIKRLDLDKRIALKNKRKAKRNKEG 172

Query: 1266 --VISSDGKENNDVEGGDVERLLREYSGSTDLVSLDWKKMKIPHVLPSSEHAWLFKLMQP 1093
              V S   ++    E  +++RL+R+YS STDLVSLDWKKMKIP VLPSSEH  LFKL+QP
Sbjct: 173  KAVPSLRKQKETKNEDDEIDRLVRDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLVQP 232

Query: 1092 MKALLQVKENLKKDMGREPTDTELAETTKMSVPKVRRQIEVGRAARNKLIRHNLRLVLFV 913
            MKAL++V+E L+K +GREPT+ ELA  T M+V +VRRQ+EVGRAARNKLI+HNLRLVLFV
Sbjct: 233  MKALVEVQEELQKGLGREPTEGELANATNMNVIQVRRQLEVGRAARNKLIKHNLRLVLFV 292

Query: 912  INKYFQEFASGSRFQDLCQAGVKGLITAIDRFEPKRRSRLSTYGLFWIRHSIMRSMTLSS 733
            INKYF++FASG +FQDLCQAGVKGLITAIDRFEPKR+ RLSTY LFWIRH+I+RSMTLSS
Sbjct: 293  INKYFEDFASGPKFQDLCQAGVKGLITAIDRFEPKRKFRLSTYALFWIRHAIIRSMTLSS 352

Query: 732  FTRVSFGLESVRVEIQRAKLELTFELEREPTEDEIIEKVGISPERYHEVMRASKPVLSLH 553
            FTRVSFGL+SVRVEIQRAKLEL  EL R PTE EI  KVGIS ERY EVMRA+KPV SLH
Sbjct: 353  FTRVSFGLDSVRVEIQRAKLELLCELHRLPTEGEITAKVGISQERYLEVMRATKPVYSLH 412

Query: 552  ARHAITQEEFINGITDTEGVGGDKRRQPAXXXXXXXXXXXXLKPKESMVIRQRYGLDGKG 373
            +RH+ T EE INGITD EG GGD RRQPA            LKPKES+VIRQRYGLDGKG
Sbjct: 413  SRHSTTSEELINGITDVEGTGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKG 472

Query: 372  DRTLGEIGGNLNISREMVRKHEVKALMKLKHQARVDYLRRYIV 244
            +RTLGEI GNLNISREMVRKHEVKALMKLKH ARVDYLRRY++
Sbjct: 473  NRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYLI 515


>ref|NP_001276145.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like
            [Glycine max] gi|382365034|dbj|BAM05478.1| sigma-like
            factor 5B [Glycine max]
          Length = 507

 Score =  578 bits (1489), Expect = e-162
 Identities = 319/520 (61%), Positives = 388/520 (74%), Gaps = 5/520 (0%)
 Frame = -3

Query: 1788 MGVVTVPSSASQTPLGLSARFSTHRSPLKRPVILAFNTDKTKNTALITNHEPISLPSDTP 1609
            MGVVTV SSA++TPLGL+ +F  +R  LKRP+I+AF  DK  ++AL+   E I +P +T 
Sbjct: 1    MGVVTVSSSAARTPLGLNTKFCNNR--LKRPLIVAFKGDKHNDSALVATQEKIPVPVETA 58

Query: 1608 K--EHKILRKSTKSSKRVKAVXXXXXXXXXXXXXDYSEAAAKLENIYKLSSPADISDAED 1435
            K  + K + K+ K  KR  +              DY+EAAA LEN+YKLS  +D ++  D
Sbjct: 59   KKTQKKRIGKTNKLPKRESS--------PSSMDVDYNEAAAMLENLYKLSPASDNAECID 110

Query: 1434 TDRLMXXXXRTKKKVEESDEQVEKEIFHNVVRS---HKKAKRLNLDXXXXXXXXXXXEMV 1264
              ++     R KK V+ES+E+  K  +  VVR+   +KK KRLNLD           + V
Sbjct: 111  -GKIKRVSRRGKKVVDESEEKELKGDW--VVRNQNKNKKPKRLNLDQRISLKNNKSGDEV 167

Query: 1263 ISSDGKENNDVEGGDVERLLREYSGSTDLVSLDWKKMKIPHVLPSSEHAWLFKLMQPMKA 1084
            I +  K N   +   +E L+REYS STD VS+DWK+M+IP VL SSEHAWLFKLMQPMKA
Sbjct: 168  IPTRKKRNVGNKIEKIEELIREYSVSTDFVSMDWKRMRIPPVLSSSEHAWLFKLMQPMKA 227

Query: 1083 LLQVKENLKKDMGREPTDTELAETTKMSVPKVRRQIEVGRAARNKLIRHNLRLVLFVINK 904
            LLQVKE+L++++ REP D ELA+ T MS+ +VR+ I+VG+AARNKLI+HNLRLVLFVINK
Sbjct: 228  LLQVKEDLQQELTREPADGELADATNMSITQVRKAIDVGQAARNKLIKHNLRLVLFVINK 287

Query: 903  YFQEFASGSRFQDLCQAGVKGLITAIDRFEPKRRSRLSTYGLFWIRHSIMRSMTLSSFTR 724
            YF +FASG RFQDLCQAGVKGLITAIDRFEP RR RLSTY LFWIRH+I+RSMTLS+FTR
Sbjct: 288  YFTDFASGPRFQDLCQAGVKGLITAIDRFEPNRRFRLSTYSLFWIRHAIIRSMTLSNFTR 347

Query: 723  VSFGLESVRVEIQRAKLELTFELEREPTEDEIIEKVGISPERYHEVMRASKPVLSLHARH 544
            V FGLESVR EIQ+AK ELTFEL+R PTE+EIIE+V ISPERYH+V++ASK +LSL++RH
Sbjct: 348  VPFGLESVRAEIQKAKTELTFELQRSPTEEEIIERVHISPERYHDVIKASKSILSLNSRH 407

Query: 543  AITQEEFINGITDTEGVGGDKRRQPAXXXXXXXXXXXXLKPKESMVIRQRYGLDGKGDRT 364
              TQEEFINGI D +GV GD R+QPA            LKPKES+VIR R+GLDGKGDRT
Sbjct: 408  TTTQEEFINGIVDDDGVNGDNRKQPALLRLALDDVLDSLKPKESLVIRXRFGLDGKGDRT 467

Query: 363  LGEIGGNLNISREMVRKHEVKALMKLKHQARVDYLRRYIV 244
            LGEI GNLNISREMVRKHEVKALMKLKH AR+DYLRRY+V
Sbjct: 468  LGEIAGNLNISREMVRKHEVKALMKLKHSARLDYLRRYVV 507