BLASTX nr result
ID: Akebia26_contig00026519
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Akebia26_contig00026519 (1904 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor rpoD ... 673 0.0 ref|XP_006350582.1| PREDICTED: RNA polymerase sigma factor sigE,... 643 0.0 ref|XP_007038959.1| Sigma factor E isoform 1 [Theobroma cacao] g... 637 e-180 ref|XP_004234179.1| PREDICTED: RNA polymerase sigma factor sigE,... 635 e-179 ref|XP_006376620.1| RNA polymerase sigma subunit SigE family pro... 629 e-177 ref|XP_007219010.1| hypothetical protein PRUPE_ppa004259mg [Prun... 623 e-176 ref|XP_004308009.1| PREDICTED: RNA polymerase sigma factor sigE,... 614 e-173 gb|EXB72455.1| RNA polymerase sigma factor rpoD [Morus notabilis] 607 e-171 ref|XP_004234180.1| PREDICTED: RNA polymerase sigma factor sigE,... 607 e-171 ref|XP_002513587.1| RNA polymerase sigma factor rpoD, putative [... 601 e-169 ref|XP_003541542.1| PREDICTED: RNA polymerase sigma factor sigE,... 600 e-169 ref|NP_001254001.1| RNA polymerase sigma factor rpoD-like [Glyci... 590 e-166 ref|XP_006422121.1| hypothetical protein CICLE_v10004760mg [Citr... 589 e-165 gb|EYU19623.1| hypothetical protein MIMGU_mgv1a020453mg [Mimulus... 585 e-164 ref|XP_004149458.1| PREDICTED: RNA polymerase sigma factor sigE,... 582 e-163 ref|XP_003602198.1| RNA polymerase sigma factor rpoD [Medicago t... 582 e-163 ref|XP_006581623.1| PREDICTED: RNA polymerase sigma factor sigE,... 580 e-163 ref|XP_006578934.1| PREDICTED: RNA polymerase sigma factor sigE,... 580 e-163 ref|XP_004166500.1| PREDICTED: RNA polymerase sigma factor sigE,... 578 e-162 ref|NP_001276145.1| RNA polymerase sigma factor sigE, chloroplas... 578 e-162 >ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera] gi|302143685|emb|CBI22546.3| unnamed protein product [Vitis vinifera] Length = 518 Score = 673 bits (1737), Expect = 0.0 Identities = 358/518 (69%), Positives = 414/518 (79%), Gaps = 4/518 (0%) Frame = -3 Query: 1788 MGVVTVPSSAS--QTPLGLSARFSTHRSPLKRPVILAFNTDKTKNTALITNHEPISLPSD 1615 MGVVTV SSAS +TP GL+A+FS H++PL+RP++LAF DK KN AL+T HEPI LP + Sbjct: 1 MGVVTVSSSASASRTPFGLNAKFSNHQTPLRRPLVLAFKADKAKNIALVTPHEPIPLPIE 60 Query: 1614 TPKEHKI-LRKSTKSSKRVKAVXXXXXXXXXXXXXDYSEAAAKLENIYKLSSPADISDAE 1438 T K+HK LR+++K SKRVKAV Y+EAAAKLENIYKLS D+S+AE Sbjct: 61 TSKDHKKRLRRASKPSKRVKAVSTDEVSPCSVELD-YNEAAAKLENIYKLSPATDVSEAE 119 Query: 1437 DTDRLMXXXXRTKKKVEESDEQVEKEIFHNVVRSH-KKAKRLNLDXXXXXXXXXXXEMVI 1261 D +R++ + +K+V +D++ EKE+ NVVR H KK KRL+L+ + V Sbjct: 120 DLERVVRRGRQRRKRVTLADDKAEKEVSDNVVRIHNKKPKRLSLEKRIALSKMKQEKAVA 179 Query: 1260 SSDGKENNDVEGGDVERLLREYSGSTDLVSLDWKKMKIPHVLPSSEHAWLFKLMQPMKAL 1081 S K ++ E +++ L+REYS STDLVSLDWKKMKIP VLP SEHAWLFKLMQPMK L Sbjct: 180 SIQKKRDSKNEDENIDVLVREYSASTDLVSLDWKKMKIPPVLPPSEHAWLFKLMQPMKGL 239 Query: 1080 LQVKENLKKDMGREPTDTELAETTKMSVPKVRRQIEVGRAARNKLIRHNLRLVLFVINKY 901 L+VK+NL+KD+GREPTD ELAE MS +VRR +EVG+AARNKLI+HNLRLVLFVINKY Sbjct: 240 LEVKDNLQKDLGREPTDGELAEAMSMSAVQVRRHMEVGQAARNKLIKHNLRLVLFVINKY 299 Query: 900 FQEFASGSRFQDLCQAGVKGLITAIDRFEPKRRSRLSTYGLFWIRHSIMRSMTLSSFTRV 721 FQEFA+G +FQDLCQAGVKGLITAIDRFEPKR RLSTYGLFWIRH+IMRSMTLSSFTRV Sbjct: 300 FQEFANGPKFQDLCQAGVKGLITAIDRFEPKRSFRLSTYGLFWIRHAIMRSMTLSSFTRV 359 Query: 720 SFGLESVRVEIQRAKLELTFELEREPTEDEIIEKVGISPERYHEVMRASKPVLSLHARHA 541 SFGLESVRVEIQRAKLEL F+L+R PTE+EIIEKVGISPERYHEVMRASK VLSLHARHA Sbjct: 360 SFGLESVRVEIQRAKLELLFKLQRLPTEEEIIEKVGISPERYHEVMRASKSVLSLHARHA 419 Query: 540 ITQEEFINGITDTEGVGGDKRRQPAXXXXXXXXXXXXLKPKESMVIRQRYGLDGKGDRTL 361 TQEE+INGITD EGVGGD+ RQ A LKPKES+V+RQRYGLDGKGDRTL Sbjct: 420 TTQEEYINGITDVEGVGGDRGRQLALLRLALDDVLDSLKPKESLVMRQRYGLDGKGDRTL 479 Query: 360 GEIGGNLNISREMVRKHEVKALMKLKHQARVDYLRRYI 247 GEI GNL+ISREMVRKHEVKALMKLKH ARVDYLR+YI Sbjct: 480 GEIAGNLSISREMVRKHEVKALMKLKHPARVDYLRQYI 517 >ref|XP_006350582.1| PREDICTED: RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like [Solanum tuberosum] Length = 516 Score = 643 bits (1658), Expect = 0.0 Identities = 342/517 (66%), Positives = 403/517 (77%), Gaps = 3/517 (0%) Frame = -3 Query: 1788 MGVVTVPSSASQTPLGLSARFSTHRSPLKRPVILAFNTDKTKNTALITNHEPISLPSDTP 1609 MGVVTV SSAS++PLGLS+RFST PLKRPVI++F DKTKNT LI E ISL +T Sbjct: 1 MGVVTVSSSASRSPLGLSSRFSTRLCPLKRPVIVSFKKDKTKNTTLIAPKESISLSIETS 60 Query: 1608 KEH-KILRKSTKSSKRVKAVXXXXXXXXXXXXXDYSEAAAKLENIYKLSSPADISDAEDT 1432 KE+ K R+ +K S+RV AV YSEAAAKLE+IYK S S+ E Sbjct: 61 KENEKRSRRVSKRSERVHAVAIEASPSTLELD--YSEAAAKLESIYKRSLETASSNTEVQ 118 Query: 1431 DRLMXXXXRTKKKVEESDEQVEKEIFHNVVRSHKK-AKRLNLDXXXXXXXXXXXEMVISS 1255 D L+ RT+K++ E DE+ +KE+ NVV++ +K +KRLNLD EMV SS Sbjct: 119 DHLVKRRPRTRKRIVEGDEEAKKEVADNVVKNRRKTSKRLNLDQRIALLKNKEGEMVASS 178 Query: 1254 DGKE-NNDVEGGDVERLLREYSGSTDLVSLDWKKMKIPHVLPSSEHAWLFKLMQPMKALL 1078 + ++ D E +++L+REYSG+TDL SLDWKKMKIP VLPSSEH WLFKLMQPMKA+L Sbjct: 179 ERRKLKEDTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSSEHVWLFKLMQPMKAIL 238 Query: 1077 QVKENLKKDMGREPTDTELAETTKMSVPKVRRQIEVGRAARNKLIRHNLRLVLFVINKYF 898 QVKENL+ D+GREPTD E+AE T M ++R+++EVGRAARNKLI+HNLRLVLFV+NKYF Sbjct: 239 QVKENLQNDLGREPTDGEVAEATNMDASELRKKLEVGRAARNKLIKHNLRLVLFVMNKYF 298 Query: 897 QEFASGSRFQDLCQAGVKGLITAIDRFEPKRRSRLSTYGLFWIRHSIMRSMTLSSFTRVS 718 Q+FA+GSRFQDLCQAGVKGLITAIDRFEP R+ RLSTYGLFWIRH+I+RSMT SSFT+V Sbjct: 299 QDFANGSRFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRSMTTSSFTKVP 358 Query: 717 FGLESVRVEIQRAKLELTFELEREPTEDEIIEKVGISPERYHEVMRASKPVLSLHARHAI 538 FGLES+RVEIQ+AKLEL FEL+R PT++EII +VG+SPERYHEVM+ SKPV SLHAR+ Sbjct: 359 FGLESIRVEIQKAKLELLFELQRIPTDEEIIRRVGLSPERYHEVMKVSKPVSSLHARNKT 418 Query: 537 TQEEFINGITDTEGVGGDKRRQPAXXXXXXXXXXXXLKPKESMVIRQRYGLDGKGDRTLG 358 TQEE INGITD +GV GDKR+QPA LKPKES+VIRQRYGLDGKGDRTLG Sbjct: 419 TQEELINGITDVDGVDGDKRKQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLG 478 Query: 357 EIGGNLNISREMVRKHEVKALMKLKHQARVDYLRRYI 247 EI GNLNISREMVRKHEVKALMKLKH RVDY+RRYI Sbjct: 479 EIAGNLNISREMVRKHEVKALMKLKHPTRVDYVRRYI 515 >ref|XP_007038959.1| Sigma factor E isoform 1 [Theobroma cacao] gi|590673674|ref|XP_007038960.1| Sigma factor E isoform 1 [Theobroma cacao] gi|508776204|gb|EOY23460.1| Sigma factor E isoform 1 [Theobroma cacao] gi|508776205|gb|EOY23461.1| Sigma factor E isoform 1 [Theobroma cacao] Length = 516 Score = 637 bits (1642), Expect = e-180 Identities = 337/516 (65%), Positives = 394/516 (76%), Gaps = 1/516 (0%) Frame = -3 Query: 1788 MGVVTVPSSASQTPLGLSARFSTHRSPLKRPVILAFNTDKTKNTALITNHEPISLPSDTP 1609 MGVV+V SSA++TPLGLS +FST R +RP+ +AF DK+ NTAL+T E I LP +T Sbjct: 1 MGVVSVSSSAARTPLGLSTKFSTQRCTSRRPLTVAFKADKSDNTALVTPQEHILLPIETA 60 Query: 1608 KEHKILRKSTKSSKRVKAVXXXXXXXXXXXXXDYSEAAAKLENIYKLSSPADISDAEDTD 1429 KEH R K ++ DY+EAAAKLENIYKLS SD E+ + Sbjct: 61 KEHPKRRGKAKKDPKIVNHVFTDDGSPCTLEVDYNEAAAKLENIYKLSPATRSSDVEEVE 120 Query: 1428 RLMXXXXRTKKKVEESDEQVEKEIFHNVVRSH-KKAKRLNLDXXXXXXXXXXXEMVISSD 1252 + + +K+ +ESDE+ VVR+ + KRL+LD + V+S Sbjct: 121 GKIKGRRQRRKRSKESDEKGVNSNDQIVVRNQTNRIKRLSLDNRIALKKNREEKPVVSVR 180 Query: 1251 GKENNDVEGGDVERLLREYSGSTDLVSLDWKKMKIPHVLPSSEHAWLFKLMQPMKALLQV 1072 K++++ E ++RL+R+YS STDLVSLDW+KMKIP VLPS EH WLFKLMQPMKALLQ Sbjct: 181 RKKSSENESEKIDRLVRDYSASTDLVSLDWRKMKIPPVLPSIEHTWLFKLMQPMKALLQA 240 Query: 1071 KENLKKDMGREPTDTELAETTKMSVPKVRRQIEVGRAARNKLIRHNLRLVLFVINKYFQE 892 KENL+KD+GR+PT+ ELAE T MS +VR+ +EVG+AARNKLI+HNLRLVLF INKYFQ+ Sbjct: 241 KENLQKDLGRDPTEDELAEATNMSAAQVRKHLEVGQAARNKLIKHNLRLVLFSINKYFQD 300 Query: 891 FASGSRFQDLCQAGVKGLITAIDRFEPKRRSRLSTYGLFWIRHSIMRSMTLSSFTRVSFG 712 FA+G RFQDLCQAGVKGLITAIDRFEP+RR RLSTY LFWIRH+I+RSMTLSSFTRVSFG Sbjct: 301 FANGPRFQDLCQAGVKGLITAIDRFEPRRRFRLSTYSLFWIRHAIIRSMTLSSFTRVSFG 360 Query: 711 LESVRVEIQRAKLELTFELEREPTEDEIIEKVGISPERYHEVMRASKPVLSLHARHAITQ 532 LESVRVEIQRAKLEL FEL REPTE+EII+KVGISPERY EVMRASKPV SLH+RH++TQ Sbjct: 361 LESVRVEIQRAKLELLFELHREPTEEEIIKKVGISPERYQEVMRASKPVASLHSRHSVTQ 420 Query: 531 EEFINGITDTEGVGGDKRRQPAXXXXXXXXXXXXLKPKESMVIRQRYGLDGKGDRTLGEI 352 EEFINGITD +GVGGD RRQPA LKPKES+VIRQRYGLDGKGDRTLGEI Sbjct: 421 EEFINGITDIDGVGGDHRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEI 480 Query: 351 GGNLNISREMVRKHEVKALMKLKHQARVDYLRRYIV 244 GNLNISREMVRKHEVKALMKLKH ARVDYLRRY+V Sbjct: 481 AGNLNISREMVRKHEVKALMKLKHPARVDYLRRYVV 516 >ref|XP_004234179.1| PREDICTED: RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like isoform 1 [Solanum lycopersicum] Length = 516 Score = 635 bits (1638), Expect = e-179 Identities = 335/517 (64%), Positives = 400/517 (77%), Gaps = 3/517 (0%) Frame = -3 Query: 1788 MGVVTVPSSASQTPLGLSARFSTHRSPLKRPVILAFNTDKTKNTALITNHEPISLPSDTP 1609 MGVVTV SSAS++PLGLS+RFS PLKRPVI++F D TKNT L++ E IS P +T Sbjct: 1 MGVVTVSSSASRSPLGLSSRFSARLCPLKRPVIVSFKKDITKNTTLVSPKESISSPIETS 60 Query: 1608 KEH-KILRKSTKSSKRVKAVXXXXXXXXXXXXXDYSEAAAKLENIYKLSSPADISDAEDT 1432 KE+ K R+ +K ++RV AV YSEAAAKLE+IYK S + E Sbjct: 61 KENEKRSRRVSKRTERVHAVTIEAPPSTLELD--YSEAAAKLESIYKRSLETASPNTEVK 118 Query: 1431 DRLMXXXXRTKKKVEESDEQVEKEIFHNVVRSH-KKAKRLNLDXXXXXXXXXXXEMVISS 1255 D L+ RT+K++ ESDE+ +KE+ NVV++ KK+KRLNLD +M+ SS Sbjct: 119 DHLVKRRPRTRKRIVESDEEAKKEVVDNVVKNRRKKSKRLNLDQRIALLKNKEGKMLASS 178 Query: 1254 DGKE-NNDVEGGDVERLLREYSGSTDLVSLDWKKMKIPHVLPSSEHAWLFKLMQPMKALL 1078 + ++ N D E +++L+REYSG+TDL SLDWKKMKIP VLPSSEH WLFKLMQPMKA+L Sbjct: 179 ERRKLNEDTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSSEHTWLFKLMQPMKAIL 238 Query: 1077 QVKENLKKDMGREPTDTELAETTKMSVPKVRRQIEVGRAARNKLIRHNLRLVLFVINKYF 898 QVKENL+ D+GREPTD E+AE T M ++R+++E GRAARNKLI+HNLRLVLFV+NKYF Sbjct: 239 QVKENLQNDLGREPTDGEVAEATNMDASELRKKLEAGRAARNKLIKHNLRLVLFVMNKYF 298 Query: 897 QEFASGSRFQDLCQAGVKGLITAIDRFEPKRRSRLSTYGLFWIRHSIMRSMTLSSFTRVS 718 Q+FA+ SRFQDLCQAGVKGLITAIDRFEP R+ RLSTYGLFWIRH+I+R MT SSFT+V Sbjct: 299 QDFANASRFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRYMTTSSFTKVP 358 Query: 717 FGLESVRVEIQRAKLELTFELEREPTEDEIIEKVGISPERYHEVMRASKPVLSLHARHAI 538 FGLES+RVEIQ+AKLEL FEL+R PT+DEII++VG SPERYHEVM+ SKP+ SLHAR+ Sbjct: 359 FGLESIRVEIQKAKLELLFELQRIPTDDEIIKRVGFSPERYHEVMKVSKPIFSLHARNKT 418 Query: 537 TQEEFINGITDTEGVGGDKRRQPAXXXXXXXXXXXXLKPKESMVIRQRYGLDGKGDRTLG 358 TQEE INGITD +GV GDKR+QPA LKPKES+VIRQRYGLDGKGDRTLG Sbjct: 419 TQEELINGITDVDGVDGDKRKQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLG 478 Query: 357 EIGGNLNISREMVRKHEVKALMKLKHQARVDYLRRYI 247 EI GNLNISREMVRKHEVKALMKLKH RVDY+RRYI Sbjct: 479 EIAGNLNISREMVRKHEVKALMKLKHPTRVDYVRRYI 515 >ref|XP_006376620.1| RNA polymerase sigma subunit SigE family protein [Populus trichocarpa] gi|550326141|gb|ERP54417.1| RNA polymerase sigma subunit SigE family protein [Populus trichocarpa] Length = 512 Score = 629 bits (1621), Expect = e-177 Identities = 336/516 (65%), Positives = 394/516 (76%), Gaps = 1/516 (0%) Frame = -3 Query: 1788 MGVVTVPSSASQTPLGLSARFSTHRSPLKRPVILAFNTDKTKNTALITNHEPISLPSDTP 1609 MGVV+V SSAS+TPLGLS +FST+ S KRP+I+AF +K+ NT+L+ HE I LP +T Sbjct: 1 MGVVSVSSSASRTPLGLSTKFSTYGSTAKRPLIVAFKANKSNNTSLVAPHEQIPLPVETT 60 Query: 1608 KEHKILRKSTKSSKRVKAVXXXXXXXXXXXXXDYSEAAAKLENIYKLSSPADISDAEDTD 1429 K K L KS KSS R+KAV Y+EAAAKLENIYKLS D SD ED Sbjct: 61 KGKKRLGKSKKSSNRLKAVRTEVSPCTLLVD--YNEAAAKLENIYKLSPGTDTSDVEDAS 118 Query: 1428 RLMXXXXRTKKKVEESDEQVEKEIFHNVVRSH-KKAKRLNLDXXXXXXXXXXXEMVISSD 1252 ++ + K+K+ E D++ E +VR+ KKAKRL+L+ ++V S+ Sbjct: 119 GVIRRGRQRKRKISEGDKETEDRTGKIIVRNRAKKAKRLSLEKRISLRIKNEEKLVSSAG 178 Query: 1251 GKENNDVEGGDVERLLREYSGSTDLVSLDWKKMKIPHVLPSSEHAWLFKLMQPMKALLQV 1072 +++ E ++ L+REYS STDLVSLDWKKMKIP VL SSEH WLFKLMQPMKALLQV Sbjct: 179 KRKDRKNENEKIDDLVREYSASTDLVSLDWKKMKIPPVLTSSEHVWLFKLMQPMKALLQV 238 Query: 1071 KENLKKDMGREPTDTELAETTKMSVPKVRRQIEVGRAARNKLIRHNLRLVLFVINKYFQE 892 KE+L++++G EPTD ELA+ T M V +VR+QI VGRAARNKLI+HNLRLVLFVI KYFQ+ Sbjct: 239 KEHLQENLGGEPTDVELAKATNMDVLQVRKQIAVGRAARNKLIKHNLRLVLFVIKKYFQD 298 Query: 891 FASGSRFQDLCQAGVKGLITAIDRFEPKRRSRLSTYGLFWIRHSIMRSMTLSSFTRVSFG 712 FA+G++FQD CQAGVKGLITAIDRFEPKRR RLSTYGLFWIRH+I+RSMTLSSFTRVSFG Sbjct: 299 FANGTKFQDFCQAGVKGLITAIDRFEPKRRFRLSTYGLFWIRHAIIRSMTLSSFTRVSFG 358 Query: 711 LESVRVEIQRAKLELTFELEREPTEDEIIEKVGISPERYHEVMRASKPVLSLHARHAITQ 532 LES+R EIQ+AKLEL F+L+R+P EDEIIEKV ISPERYHEV RASKPVLSLH+RH TQ Sbjct: 359 LESIRSEIQKAKLELWFQLKRQPMEDEIIEKVRISPERYHEVTRASKPVLSLHSRHKTTQ 418 Query: 531 EEFINGITDTEGVGGDKRRQPAXXXXXXXXXXXXLKPKESMVIRQRYGLDGKGDRTLGEI 352 EEFI GI D + GGD RRQ A LKPKES+V+RQRYGLDGKGDRTLGEI Sbjct: 419 EEFIGGIADVD--GGDDRRQSALLRLALDDVLDSLKPKESLVVRQRYGLDGKGDRTLGEI 476 Query: 351 GGNLNISREMVRKHEVKALMKLKHQARVDYLRRYIV 244 GNLNISREMVRKHEVKALMKLKH RVDYLRRY+V Sbjct: 477 AGNLNISREMVRKHEVKALMKLKHPTRVDYLRRYVV 512 >ref|XP_007219010.1| hypothetical protein PRUPE_ppa004259mg [Prunus persica] gi|462415472|gb|EMJ20209.1| hypothetical protein PRUPE_ppa004259mg [Prunus persica] Length = 519 Score = 623 bits (1607), Expect = e-176 Identities = 340/520 (65%), Positives = 397/520 (76%), Gaps = 5/520 (0%) Frame = -3 Query: 1788 MGVVTVPSSASQTPLGLSARFSTHRSPLKRPVILAFNTDKTKNTALITNHEPISLPSDTP 1609 MGVVTV SSAS+TPLGLS + + RS L++P+I+AF TD+ TAL+ E I LP +T Sbjct: 1 MGVVTVSSSASRTPLGLSTKLTIQRSTLRKPLIVAFKTDEANKTALVAPQEKIPLPIETR 60 Query: 1608 KEH-KILRKSTKSSKRVKAVXXXXXXXXXXXXXDYSEAAAKLENIYKLSSPADI-SDAED 1435 K+H K L K+ K +K VK+ Y+EAAAKLEN+YK S + SD ED Sbjct: 61 KKHQKRLGKARKLAKSVKSATTDVASPCTLEVD-YNEAAAKLENLYKRSPETEANSDVED 119 Query: 1434 TDRLMXXXXRTKKKVEESD-EQVEKEIFHNVVRSH-KKAKRLNLDXXXXXXXXXXXEMVI 1261 D LM + +KK ESD ++ E + VVR+ KKAKRL+L+ +++ Sbjct: 120 VDGLMRRGRKRRKKTSESDADKDENRTSNTVVRNRTKKAKRLSLNKRVALKWNKDEKVIS 179 Query: 1260 SSDGK-ENNDVEGGDVERLLREYSGSTDLVSLDWKKMKIPHVLPSSEHAWLFKLMQPMKA 1084 S K ++ E +E L+REYS STDLVSLDWKKMKIP VL SSEHAWLFKLMQPMK Sbjct: 180 SIVRKRKSRKNENEKIEELVREYSTSTDLVSLDWKKMKIPPVLTSSEHAWLFKLMQPMKG 239 Query: 1083 LLQVKENLKKDMGREPTDTELAETTKMSVPKVRRQIEVGRAARNKLIRHNLRLVLFVINK 904 LL+VKENL+KD+GREPT+ ELAE T MSV +V++ +EVGRAAR+KLI+HNLRLVLFV+NK Sbjct: 240 LLEVKENLQKDLGREPTNGELAEATNMSVVQVKKHLEVGRAARSKLIKHNLRLVLFVMNK 299 Query: 903 YFQEFASGSRFQDLCQAGVKGLITAIDRFEPKRRSRLSTYGLFWIRHSIMRSMTLSSFTR 724 YFQ+FA+G +FQDLCQAGVKGLITAIDRFEPKR RLSTYGLFWIRH+I+RSMTLSSFTR Sbjct: 300 YFQDFANGPKFQDLCQAGVKGLITAIDRFEPKRSFRLSTYGLFWIRHAIIRSMTLSSFTR 359 Query: 723 VSFGLESVRVEIQRAKLELTFELEREPTEDEIIEKVGISPERYHEVMRASKPVLSLHARH 544 VSFGLESVR EIQ+AKL + F L+R PTEDEIIEKVGISPERYHEVMRASKPV SLH+RH Sbjct: 360 VSFGLESVRAEIQKAKLGMLFALKRMPTEDEIIEKVGISPERYHEVMRASKPVFSLHSRH 419 Query: 543 AITQEEFINGITDTEGVGGDKRRQPAXXXXXXXXXXXXLKPKESMVIRQRYGLDGKGDRT 364 TQEEFINGITD +GV GD R++PA LKPKES+VIRQRYGLDGKGDRT Sbjct: 420 TTTQEEFINGITDVDGVEGDNRQKPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRT 479 Query: 363 LGEIGGNLNISREMVRKHEVKALMKLKHQARVDYLRRYIV 244 LGEI GNLNISREMVRKHEVKALMKLKH ARVDYLRRY+V Sbjct: 480 LGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYVV 519 >ref|XP_004308009.1| PREDICTED: RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like [Fragaria vesca subsp. vesca] Length = 520 Score = 614 bits (1583), Expect = e-173 Identities = 341/521 (65%), Positives = 394/521 (75%), Gaps = 6/521 (1%) Frame = -3 Query: 1788 MGVVTVPSSASQTPLGLSARF-STHRSPLKRPVILAFNTDKTKNTALITNHEPISLPSDT 1612 MGVVTV SS S+TPLGLS S+ RS L++P+I+AF TDK+ AL+ E + LP +T Sbjct: 1 MGVVTVSSSVSRTPLGLSTNLVSSQRSTLRKPLIVAFRTDKSDKKALVAPQEKVPLPIET 60 Query: 1611 PKE-HKILRKSTKSSKRVKAVXXXXXXXXXXXXXDYSEAAAKLENIYKLSSPADISDAED 1435 K+ K L K+ K K VKA Y+EAAAKLEN+YK S + SD E+ Sbjct: 61 GKKVQKRLGKARKLPKSVKAALIEEAPTCDLELD-YNEAAAKLENLYKRSPETEASDVEN 119 Query: 1434 TDRLMXXXXRTK-KKVEESDEQVEKEIFHN-VVRS-HKKAKRLNLDXXXXXXXXXXXEMV 1264 D LM R + KK+ E D++VEK + VVRS KKAKRL+LD ++ Sbjct: 120 VDGLMIKRGRKRRKKISEVDDKVEKRTSDDIVVRSVTKKAKRLSLDKRVALKWNKDEKVA 179 Query: 1263 ISSDGKENND-VEGGDVERLLREYSGSTDLVSLDWKKMKIPHVLPSSEHAWLFKLMQPMK 1087 S K + E +E L+REYS STDLVSLDWKKM+IP VL SSEH WLFKLMQPMK Sbjct: 180 ASVVRKRKDKRSENEMMEELVREYSASTDLVSLDWKKMRIPPVLSSSEHTWLFKLMQPMK 239 Query: 1086 ALLQVKENLKKDMGREPTDTELAETTKMSVPKVRRQIEVGRAARNKLIRHNLRLVLFVIN 907 LL+VKE L+KD+GREP ELAE T M+V +V+R +EVGRAARNKLI+HNLRLVLFVIN Sbjct: 240 GLLEVKEILQKDLGREPNKGELAEATNMTVVQVKRHLEVGRAARNKLIKHNLRLVLFVIN 299 Query: 906 KYFQEFASGSRFQDLCQAGVKGLITAIDRFEPKRRSRLSTYGLFWIRHSIMRSMTLSSFT 727 KYFQ+FA+G +FQDLCQAGVKGLITAIDRFEP+RR RLSTYGLFWIRH+I+RSMTLSSFT Sbjct: 300 KYFQDFANGPKFQDLCQAGVKGLITAIDRFEPQRRFRLSTYGLFWIRHAIIRSMTLSSFT 359 Query: 726 RVSFGLESVRVEIQRAKLELTFELEREPTEDEIIEKVGISPERYHEVMRASKPVLSLHAR 547 RVSFGLESVR EIQ+AKLE+ +L+R PTEDEIIEKVGISPERYHEVMRASKPV SL++R Sbjct: 360 RVSFGLESVRAEIQKAKLEMLVQLKRMPTEDEIIEKVGISPERYHEVMRASKPVFSLNSR 419 Query: 546 HAITQEEFINGITDTEGVGGDKRRQPAXXXXXXXXXXXXLKPKESMVIRQRYGLDGKGDR 367 H++TQEEFINGITD +GV GD RR+PA LKPKES+VIRQRYGLDGKGDR Sbjct: 420 HSVTQEEFINGITDVDGVDGDNRRKPALLRLAIDDVLDSLKPKESLVIRQRYGLDGKGDR 479 Query: 366 TLGEIGGNLNISREMVRKHEVKALMKLKHQARVDYLRRYIV 244 TLGEI GNLNISREMVRKHEVKALMKLKH ARVDYLRRYIV Sbjct: 480 TLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYIV 520 >gb|EXB72455.1| RNA polymerase sigma factor rpoD [Morus notabilis] Length = 517 Score = 607 bits (1565), Expect = e-171 Identities = 339/522 (64%), Positives = 395/522 (75%), Gaps = 7/522 (1%) Frame = -3 Query: 1788 MGVVTVPSSASQTPLGLSARFSTHRSP-LKRPVILAFNTDKTKNTALITNHEPISLPSDT 1612 MGVVTV SSAS+TPLGLS +FS++RS LK+P+I+AF DK+ T L+ + I LP +T Sbjct: 1 MGVVTVSSSASRTPLGLSLKFSSNRSSVLKKPLIVAFKGDKSNKTVLVAPQDQIILPVET 60 Query: 1611 PKEHKI-LRKSTKSSKRVKAVXXXXXXXXXXXXXDYSEAAAKLENIYKLSSPADISDAED 1435 KE K + K+ KSS RVKAV Y+EAAAKLENI+KLSS +D ED Sbjct: 61 RKEVKSRVGKAKKSSNRVKAVATDEASTSTMEVD-YNEAAAKLENIFKLSS----ADVED 115 Query: 1434 TDRLMXXXXRTKKKV-EESDEQVEKE--IFHNVVRSHKK-AKRLNLDXXXXXXXXXXXEM 1267 L R + KV ESDE+ K+ VVR+ KK AKRL+L + Sbjct: 116 AVGLTSRGRRRRSKVIGESDERAGKKSTTSDTVVRNRKKKAKRLSLHKRVELKRDKEENV 175 Query: 1266 VISSDGKENNDV-EGGDVERLLREYSGSTDLVSLDWKKMKIPHVLPSSEHAWLFKLMQPM 1090 + K + E +E+L+REYS STDLVSLDWKKMKIP VLPSSEH WLFKLMQP+ Sbjct: 176 AVVLVRKRRESLNEEEKIEKLVREYSASTDLVSLDWKKMKIPPVLPSSEHTWLFKLMQPL 235 Query: 1089 KALLQVKENLKKDMGREPTDTELAETTKMSVPKVRRQIEVGRAARNKLIRHNLRLVLFVI 910 K L QV E+L+K +GREPT+ ELAE T +SV +V+R +E GRAARNKLI+HNLRLVLFV+ Sbjct: 236 KQLFQVGEDLQKTLGREPTENELAEATNISVVQVKRHLEAGRAARNKLIKHNLRLVLFVM 295 Query: 909 NKYFQEFASGSRFQDLCQAGVKGLITAIDRFEPKRRSRLSTYGLFWIRHSIMRSMTLSSF 730 NKYFQ+F +G +FQDLCQAGV+GLITAIDRFEPKRR RLSTYGLFWIRH+I+RSMT+SSF Sbjct: 296 NKYFQDFTNGPKFQDLCQAGVRGLITAIDRFEPKRRFRLSTYGLFWIRHAIIRSMTVSSF 355 Query: 729 TRVSFGLESVRVEIQRAKLELTFELEREPTEDEIIEKVGISPERYHEVMRASKPVLSLHA 550 TRVSFGLESVR EIQ+AK+ELTFEL+R PTE+EIIEKVGISPERYHEVMRASKPV+SL++ Sbjct: 356 TRVSFGLESVRAEIQKAKIELTFELKRLPTEEEIIEKVGISPERYHEVMRASKPVISLNS 415 Query: 549 RHAITQEEFINGITDTEGVGGDKRRQPAXXXXXXXXXXXXLKPKESMVIRQRYGLDGKGD 370 RH TQEEFIN ITD +GV GD RR+PA LKPKES+VIRQRYGLDGKGD Sbjct: 416 RHVTTQEEFINAITDVDGVDGDDRRKPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGD 475 Query: 369 RTLGEIGGNLNISREMVRKHEVKALMKLKHQARVDYLRRYIV 244 RTLGEI GNLNISREMVRKHEVKALMKLKH ARVDYLRRY+V Sbjct: 476 RTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYMV 517 >ref|XP_004234180.1| PREDICTED: RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like isoform 2 [Solanum lycopersicum] Length = 487 Score = 607 bits (1565), Expect = e-171 Identities = 326/516 (63%), Positives = 383/516 (74%), Gaps = 2/516 (0%) Frame = -3 Query: 1788 MGVVTVPSSASQTPLGLSARFSTHRSPLKRPVILAFNTDKTKNTALITNHEPISLPSDTP 1609 MGVVTV SSAS++PLGLS+RFS PLKRPVI++F D TKNT L++ E IS P +T Sbjct: 1 MGVVTVSSSASRSPLGLSSRFSARLCPLKRPVIVSFKKDITKNTTLVSPKESISSPIETS 60 Query: 1608 KEH-KILRKSTKSSKRVKAVXXXXXXXXXXXXXDYSEAAAKLENIYKLSSPADISDAEDT 1432 KE+ K R+ +K ++RV AV YSEAAAKLE+IYK S + E Sbjct: 61 KENEKRSRRVSKRTERVHAVTIEAPPSTLELD--YSEAAAKLESIYKRSLETASPNTEVK 118 Query: 1431 DRLMXXXXRTKKKVEESDEQVEKEIFHNVVRSH-KKAKRLNLDXXXXXXXXXXXEMVISS 1255 D L+ RT+K++ ESDE+ +KE+ NVV++ KK+KRLNLD Sbjct: 119 DHLVKRRPRTRKRIVESDEEAKKEVVDNVVKNRRKKSKRLNLDQRIA------------- 165 Query: 1254 DGKENNDVEGGDVERLLREYSGSTDLVSLDWKKMKIPHVLPSSEHAWLFKLMQPMKALLQ 1075 LL+ G+TDL SLDWKKMKIP VLPSSEH WLFKLMQPMKA+LQ Sbjct: 166 ---------------LLKNKEGATDLASLDWKKMKIPPVLPSSEHTWLFKLMQPMKAILQ 210 Query: 1074 VKENLKKDMGREPTDTELAETTKMSVPKVRRQIEVGRAARNKLIRHNLRLVLFVINKYFQ 895 VKENL+ D+GREPTD E+AE T M ++R+++E GRAARNKLI+HNLRLVLFV+NKYFQ Sbjct: 211 VKENLQNDLGREPTDGEVAEATNMDASELRKKLEAGRAARNKLIKHNLRLVLFVMNKYFQ 270 Query: 894 EFASGSRFQDLCQAGVKGLITAIDRFEPKRRSRLSTYGLFWIRHSIMRSMTLSSFTRVSF 715 +FA+ SRFQDLCQAGVKGLITAIDRFEP R+ RLSTYGLFWIRH+I+R MT SSFT+V F Sbjct: 271 DFANASRFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRYMTTSSFTKVPF 330 Query: 714 GLESVRVEIQRAKLELTFELEREPTEDEIIEKVGISPERYHEVMRASKPVLSLHARHAIT 535 GLES+RVEIQ+AKLEL FEL+R PT+DEII++VG SPERYHEVM+ SKP+ SLHAR+ T Sbjct: 331 GLESIRVEIQKAKLELLFELQRIPTDDEIIKRVGFSPERYHEVMKVSKPIFSLHARNKTT 390 Query: 534 QEEFINGITDTEGVGGDKRRQPAXXXXXXXXXXXXLKPKESMVIRQRYGLDGKGDRTLGE 355 QEE INGITD +GV GDKR+QPA LKPKES+VIRQRYGLDGKGDRTLGE Sbjct: 391 QEELINGITDVDGVDGDKRKQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGE 450 Query: 354 IGGNLNISREMVRKHEVKALMKLKHQARVDYLRRYI 247 I GNLNISREMVRKHEVKALMKLKH RVDY+RRYI Sbjct: 451 IAGNLNISREMVRKHEVKALMKLKHPTRVDYVRRYI 486 >ref|XP_002513587.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis] gi|223547495|gb|EEF48990.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis] Length = 501 Score = 601 bits (1549), Expect = e-169 Identities = 325/516 (62%), Positives = 389/516 (75%), Gaps = 1/516 (0%) Frame = -3 Query: 1788 MGVVTVPSSASQTPLGLSARFSTHRSPLKRPVILAFNTDKTKNTALITNHEPISLPSDTP 1609 MGVVT SSA++TPLGLS +FST+RS +KR +++AF DK + L+ E LP +T Sbjct: 1 MGVVTASSSAARTPLGLSLKFSTYRSTVKRSLVVAFKEDKANDIILVPPRERTPLPIETS 60 Query: 1608 KEHKILRKSTKSSKRVKAVXXXXXXXXXXXXXDYSEAAAKLENIYKLSSPADISDAEDTD 1429 K K + K+++ V + DY+EAAAKLENIYKLS D SD D + Sbjct: 61 KGKK---RRGKTNREVSS---------GTLEVDYNEAAAKLENIYKLSPATDTSDV-DIN 107 Query: 1428 RLMXXXXRTKKKVEESDEQVEKEIFHNVVRSH-KKAKRLNLDXXXXXXXXXXXEMVISSD 1252 L+ + K+K E DE+ E +VR+ KK KRL+LD E+V Sbjct: 108 GLIRKGRQRKRKTGEGDEKAENRTSRTIVRNRAKKTKRLSLDKRIALKKNEEEEVVGPIR 167 Query: 1251 GKENNDVEGGDVERLLREYSGSTDLVSLDWKKMKIPHVLPSSEHAWLFKLMQPMKALLQV 1072 K+++ + +E L+R YS ST+LVSLDW+KMKIP VLPS+EHAWLFKLMQPMK LL V Sbjct: 168 KKKDSKDDNEKIEELVRTYSASTNLVSLDWRKMKIPPVLPSTEHAWLFKLMQPMKTLLPV 227 Query: 1071 KENLKKDMGREPTDTELAETTKMSVPKVRRQIEVGRAARNKLIRHNLRLVLFVINKYFQE 892 K +L+K++GR+PTD ELAE T M+V KVR+Q+EVGRAARNKLI+HNLRLV+FV+NKYFQ+ Sbjct: 228 KADLQKNLGRDPTDGELAEATNMNVEKVRKQLEVGRAARNKLIKHNLRLVMFVMNKYFQD 287 Query: 891 FASGSRFQDLCQAGVKGLITAIDRFEPKRRSRLSTYGLFWIRHSIMRSMTLSSFTRVSFG 712 FA+G RFQDLCQAGVKGLITAIDRFEP+RR +LSTY LFWIRH+I+RSMTLSSFT+VSFG Sbjct: 288 FANGPRFQDLCQAGVKGLITAIDRFEPQRRFQLSTYSLFWIRHAIIRSMTLSSFTKVSFG 347 Query: 711 LESVRVEIQRAKLELTFELEREPTEDEIIEKVGISPERYHEVMRASKPVLSLHARHAITQ 532 LESVR EIQ+AKLEL EL+R PTE+EIIE+VGIS ERYHEV+RA+KP LSLHARHA+TQ Sbjct: 348 LESVRTEIQKAKLELLIELQRRPTEEEIIERVGISAERYHEVIRAAKPALSLHARHAVTQ 407 Query: 531 EEFINGITDTEGVGGDKRRQPAXXXXXXXXXXXXLKPKESMVIRQRYGLDGKGDRTLGEI 352 EEFINGITD + GGD RRQPA LKPKES+VIRQRYGLDGKGDRTLGEI Sbjct: 408 EEFINGITDID--GGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEI 465 Query: 351 GGNLNISREMVRKHEVKALMKLKHQARVDYLRRYIV 244 GNLNISREMVRK+EVKALMKLKH ARVDYLRRY+V Sbjct: 466 AGNLNISREMVRKYEVKALMKLKHPARVDYLRRYVV 501 >ref|XP_003541542.1| PREDICTED: RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like isoform X1 [Glycine max] gi|571496981|ref|XP_006593757.1| PREDICTED: RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like isoform X2 [Glycine max] Length = 512 Score = 600 bits (1546), Expect = e-169 Identities = 325/517 (62%), Positives = 393/517 (76%), Gaps = 2/517 (0%) Frame = -3 Query: 1788 MGVVTVPSSASQTPLGLSARFSTHRSPLKRPVILAFNTDKTKNTALITNHEPISLPSDTP 1609 MGV+TV +SA++TPL L+ R +H+ KRP+ILAF +K+ T L++ E I LP +T Sbjct: 1 MGVITVSTSAARTPLRLNTRLISHQQVHKRPIILAFKGNKSNKTTLVSPQEKIPLPLETA 60 Query: 1608 KEH-KILRKSTKSSKRVKAVXXXXXXXXXXXXXDYSEAAAKLENIYKLSSPADISDAEDT 1432 K+H K + K+++S KRV+AV Y+EAAAKLENIYKLS +D + ED Sbjct: 61 KKHQKRVGKTSESLKRVRAVSTVETSPCTLDVD-YNEAAAKLENIYKLSPVSDTCNVEDI 119 Query: 1431 DRLMXXXXRTKKKVEESDEQVEKEIFHNVVRS-HKKAKRLNLDXXXXXXXXXXXEMVISS 1255 D + R +KKV E + + NVVR+ +KKAKRL+LD E++ + Sbjct: 120 DSKIERVLRRRKKVSEERDDGNCD---NVVRNQNKKAKRLSLDKRIALKNNAKEEVIDQT 176 Query: 1254 DGKENNDVEGGDVERLLREYSGSTDLVSLDWKKMKIPHVLPSSEHAWLFKLMQPMKALLQ 1075 K N +++ L+R+YS STDLVS+DWKKMKIP VLPSSEHAWLFKLMQPMKALLQ Sbjct: 177 QKKRNVKNRVQNIDVLIRDYSASTDLVSMDWKKMKIPPVLPSSEHAWLFKLMQPMKALLQ 236 Query: 1074 VKENLKKDMGREPTDTELAETTKMSVPKVRRQIEVGRAARNKLIRHNLRLVLFVINKYFQ 895 KE+LK ++ +E T ELA+ T MS+ +VR+ IEVGRAARNKLI+HNLRLVLFVINKYFQ Sbjct: 237 AKEDLK-EVDKEITGGELADATNMSIIQVRKAIEVGRAARNKLIKHNLRLVLFVINKYFQ 295 Query: 894 EFASGSRFQDLCQAGVKGLITAIDRFEPKRRSRLSTYGLFWIRHSIMRSMTLSSFTRVSF 715 +FASG RFQDLCQAGVKGLITAIDRFEPKRR +LSTY LFWIRHSI+RS+TLSSFTRV F Sbjct: 296 DFASGPRFQDLCQAGVKGLITAIDRFEPKRRLQLSTYSLFWIRHSIVRSITLSSFTRVPF 355 Query: 714 GLESVRVEIQRAKLELTFELEREPTEDEIIEKVGISPERYHEVMRASKPVLSLHARHAIT 535 GLE VRV+IQR KL+LTFEL+R PTE+E++E++GIS ERYHEVM+ASKP+LSLH+RH T Sbjct: 356 GLERVRVDIQRTKLKLTFELQRSPTEEELVERIGISLERYHEVMKASKPILSLHSRHITT 415 Query: 534 QEEFINGITDTEGVGGDKRRQPAXXXXXXXXXXXXLKPKESMVIRQRYGLDGKGDRTLGE 355 QEE+INGITD +GV GD RRQ A LKPKES+VIRQRYGLDGKGDRTLGE Sbjct: 416 QEEYINGITDVDGVNGDNRRQLAVLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGE 475 Query: 354 IGGNLNISREMVRKHEVKALMKLKHQARVDYLRRYIV 244 I GNLNISRE+VRKHEVKALMKLKH AR+DYLRRY+V Sbjct: 476 IAGNLNISREIVRKHEVKALMKLKHPARLDYLRRYVV 512 >ref|NP_001254001.1| RNA polymerase sigma factor rpoD-like [Glycine max] gi|382365028|dbj|BAM05477.1| sigma-like factor 5A [Glycine max] Length = 512 Score = 590 bits (1521), Expect = e-166 Identities = 320/517 (61%), Positives = 390/517 (75%), Gaps = 2/517 (0%) Frame = -3 Query: 1788 MGVVTVPSSASQTPLGLSARFSTHRSPLKRPVILAFNTDKTKNTALITNHEPISLPSDTP 1609 MGVVTV + A++TPL L+ R ++H+ KRP+I+AF +K AL++ E I LP +T Sbjct: 1 MGVVTVSTLAARTPLRLNTRLTSHQQVHKRPLIVAFKGNKLNKAALVSPQEQIPLPIETA 60 Query: 1608 K-EHKILRKSTKSSKRVKAVXXXXXXXXXXXXXDYSEAAAKLENIYKLSSPADISDAEDT 1432 K + K + K+++S KRV+AV Y+EAAAKLENIYKLS +D + ED Sbjct: 61 KKDQKRVGKTSESLKRVRAVSIVETSPCTLDMD-YNEAAAKLENIYKLSPVSDTCNMEDI 119 Query: 1431 DRLMXXXXRTKKKVEESDEQVEKEIFHNVVRS-HKKAKRLNLDXXXXXXXXXXXEMVISS 1255 D + ++KV + +I VVR+ +KKAKRL+LD E++ + Sbjct: 120 DSKVERVLWRRRKVGNEHDDENCDI---VVRNQNKKAKRLSLDKRITLKNNAKEEVIDQT 176 Query: 1254 DGKENNDVEGGDVERLLREYSGSTDLVSLDWKKMKIPHVLPSSEHAWLFKLMQPMKALLQ 1075 N +++ L+R+YS STDLVS+DWKKMKIP VLPSSEHAWLFKLMQPMKALLQ Sbjct: 177 QKIRNVKNRVQNIDVLIRDYSASTDLVSMDWKKMKIPAVLPSSEHAWLFKLMQPMKALLQ 236 Query: 1074 VKENLKKDMGREPTDTELAETTKMSVPKVRRQIEVGRAARNKLIRHNLRLVLFVINKYFQ 895 KE+L+ +G+E TD ELA+ T MS+ +VR+ IEVGRAARNKLI+HNLRLVLFVI+KYFQ Sbjct: 237 AKEDLQS-VGKEITDGELADATNMSIIQVRKAIEVGRAARNKLIKHNLRLVLFVISKYFQ 295 Query: 894 EFASGSRFQDLCQAGVKGLITAIDRFEPKRRSRLSTYGLFWIRHSIMRSMTLSSFTRVSF 715 +FASG RFQDLCQAGVKGLITAIDRFEPKRR +LSTY LFWIRHSI+RS+TLSSFTRV F Sbjct: 296 DFASGRRFQDLCQAGVKGLITAIDRFEPKRRLQLSTYSLFWIRHSIVRSITLSSFTRVPF 355 Query: 714 GLESVRVEIQRAKLELTFELEREPTEDEIIEKVGISPERYHEVMRASKPVLSLHARHAIT 535 GLE VRV+IQR KL+LTFEL+R PTE+E++E++GISPERY+EVM+ASKP+LSLH+RH T Sbjct: 356 GLERVRVDIQRTKLKLTFELQRSPTEEELVERIGISPERYYEVMKASKPILSLHSRHITT 415 Query: 534 QEEFINGITDTEGVGGDKRRQPAXXXXXXXXXXXXLKPKESMVIRQRYGLDGKGDRTLGE 355 QEE+INGITD +GV GD RRQ A LKPKES+VIRQRYGLDGKGDRTLGE Sbjct: 416 QEEYINGITDVDGVNGDNRRQLAVLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGE 475 Query: 354 IGGNLNISREMVRKHEVKALMKLKHQARVDYLRRYIV 244 I GNLNISREMVRKHEVKALMKLKH AR+DYLRRY+V Sbjct: 476 IAGNLNISREMVRKHEVKALMKLKHPARLDYLRRYVV 512 >ref|XP_006422121.1| hypothetical protein CICLE_v10004760mg [Citrus clementina] gi|567858878|ref|XP_006422122.1| hypothetical protein CICLE_v10004760mg [Citrus clementina] gi|568874930|ref|XP_006490565.1| PREDICTED: RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like isoform X1 [Citrus sinensis] gi|568874932|ref|XP_006490566.1| PREDICTED: RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like isoform X2 [Citrus sinensis] gi|568874934|ref|XP_006490567.1| PREDICTED: RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like isoform X3 [Citrus sinensis] gi|557523994|gb|ESR35361.1| hypothetical protein CICLE_v10004760mg [Citrus clementina] gi|557523995|gb|ESR35362.1| hypothetical protein CICLE_v10004760mg [Citrus clementina] Length = 513 Score = 589 bits (1519), Expect = e-165 Identities = 318/517 (61%), Positives = 386/517 (74%), Gaps = 2/517 (0%) Frame = -3 Query: 1788 MGVVTVPSSASQTPLGLSARFSTHRSPLKRPVILAFNTDKTKNTALITNHEPISLPSDTP 1609 MGVVT+ SS +++P+GLS +HRS KRP+I+AF DK+ N AL + E I LP +TP Sbjct: 1 MGVVTISSSPARSPIGLST--ISHRSTSKRPLIVAFKADKSNNQALFSPQEQIPLPIETP 58 Query: 1608 KEHKILRK-STKSSKRVKAVXXXXXXXXXXXXXDYSEAAAKLENIYKLSSPADISDAEDT 1432 K H+ R+ S K +RVK V Y+EAAAKLENIYKLS S+ + Sbjct: 59 KRHQKRRENSRKRLERVKGVFSDEASPCTLDVD-YNEAAAKLENIYKLSPAVTTSEVKYA 117 Query: 1431 DRLMXXXXRTKKKVEESDEQVEKEIFHNVVRSH-KKAKRLNLDXXXXXXXXXXXEMVISS 1255 D ++ + +K++ E +++ + VVR+ K+ KRL+LD ++V + Sbjct: 118 DGVVKRGRQRRKRIGEVEKKSDDVSGKPVVRNQVKRPKRLSLDKRIELRKNEDEKVVTKT 177 Query: 1254 DGKENNDVEGGDVERLLREYSGSTDLVSLDWKKMKIPHVLPSSEHAWLFKLMQPMKALLQ 1075 ++ D E +E+L+REYS STDLVSLDWKKMKIP VL S+EH WLFKLMQPMK +Q Sbjct: 178 RKTDSKD-EHEKIEKLVREYSYSTDLVSLDWKKMKIPPVLSSTEHTWLFKLMQPMKVFVQ 236 Query: 1074 VKENLKKDMGREPTDTELAETTKMSVPKVRRQIEVGRAARNKLIRHNLRLVLFVINKYFQ 895 VKE L+KD+GREPTD ELAE T MS +V++ +EVGRAARNKLI+HNLRLVLFVI KYFQ Sbjct: 237 VKEQLQKDLGREPTDVELAEATNMSAAQVKKCLEVGRAARNKLIKHNLRLVLFVIKKYFQ 296 Query: 894 EFASGSRFQDLCQAGVKGLITAIDRFEPKRRSRLSTYGLFWIRHSIMRSMTLSSFTRVSF 715 +FA+G RFQDLCQAGVKGLITAIDRFEPKRR RLSTYGLFWIRH+I+RSMT+SSFTRV F Sbjct: 297 DFANGPRFQDLCQAGVKGLITAIDRFEPKRRFRLSTYGLFWIRHAIIRSMTVSSFTRVPF 356 Query: 714 GLESVRVEIQRAKLELTFELEREPTEDEIIEKVGISPERYHEVMRASKPVLSLHARHAIT 535 GLESVR EIQRAKLEL FEL+R PT++EII+ V ISPERY EVM+ASKP+LSLH+RH +T Sbjct: 357 GLESVRGEIQRAKLELLFELKRVPTDEEIIQGVNISPERYREVMKASKPILSLHSRHGVT 416 Query: 534 QEEFINGITDTEGVGGDKRRQPAXXXXXXXXXXXXLKPKESMVIRQRYGLDGKGDRTLGE 355 QEEFINGITD +GV + +RQPA LKPKES+VIRQR+GLDGKGDRTLGE Sbjct: 417 QEEFINGITDVDGVENENQRQPALLRLALDDVLDSLKPKESLVIRQRFGLDGKGDRTLGE 476 Query: 354 IGGNLNISREMVRKHEVKALMKLKHQARVDYLRRYIV 244 I GNLNISREMVRKHEVK LMKLKH RVDYLR+++V Sbjct: 477 IAGNLNISREMVRKHEVKGLMKLKHPTRVDYLRQHMV 513 >gb|EYU19623.1| hypothetical protein MIMGU_mgv1a020453mg [Mimulus guttatus] Length = 515 Score = 585 bits (1507), Expect = e-164 Identities = 317/517 (61%), Positives = 389/517 (75%), Gaps = 3/517 (0%) Frame = -3 Query: 1788 MGVVTVPSSASQTPLGLSARFSTHRSPLKRPVILAFNTDKTKNTALITNHEPISLPSDTP 1609 MGVVTV +SAS+T LGL+ R+ T S L+RPV+ AF DK K LI+ E +LP + Sbjct: 1 MGVVTVSTSASRTSLGLNERYLTRVSILRRPVVFAFKNDKIKKIVLISPRESAALPLEAT 60 Query: 1608 KEH-KILRKSTKSSKRVKAVXXXXXXXXXXXXXDYSEAAAKLENIYKLSSPADISDAEDT 1432 K++ K LRK K ++RV AV Y+EAAAKLE I+K S +IS E Sbjct: 61 KDNEKRLRKVKKRAERVNAVSTDEAPPSTIDLD-YNEAAAKLEYIFKQSPTVEISVDEVK 119 Query: 1431 DRLMXXXXRTKKKVEESDEQVEKEIFHNVVRSHK-KAKRLNLDXXXXXXXXXXXEMV-IS 1258 D + + +K+ E +DE ++I NVVRS + K +RLNL+ E I Sbjct: 120 D-VRVKRRQPRKRTEYADEA--EKIADNVVRSRRSKDRRLNLEKRIALRTKKEDESTAIF 176 Query: 1257 SDGKENNDVEGGDVERLLREYSGSTDLVSLDWKKMKIPHVLPSSEHAWLFKLMQPMKALL 1078 K + E ++RL+R+YS S+DLVSLDWKKMKIP VLPS+EH WLFKLMQP+KA+L Sbjct: 177 QRRKTGKNDEDEKIDRLVRDYSASSDLVSLDWKKMKIPPVLPSAEHVWLFKLMQPVKAIL 236 Query: 1077 QVKENLKKDMGREPTDTELAETTKMSVPKVRRQIEVGRAARNKLIRHNLRLVLFVINKYF 898 VKE ++ ++GREPTD +LA M ++R+Q+E+GRAARNKLI+HNLRLVLFV+NKYF Sbjct: 237 DVKETIENNLGREPTDEKLATAINMDTVQLRKQLEIGRAARNKLIKHNLRLVLFVMNKYF 296 Query: 897 QEFASGSRFQDLCQAGVKGLITAIDRFEPKRRSRLSTYGLFWIRHSIMRSMTLSSFTRVS 718 Q+F++GSRFQDLCQAG KGLITAIDRFEPKR+ RLSTYGLFWIRHSI+RSMTLSSFT+VS Sbjct: 297 QDFSNGSRFQDLCQAGAKGLITAIDRFEPKRKLRLSTYGLFWIRHSIIRSMTLSSFTKVS 356 Query: 717 FGLESVRVEIQRAKLELTFELEREPTEDEIIEKVGISPERYHEVMRASKPVLSLHARHAI 538 FGLESVRVEI++AKLEL FEL+R PT++EI+ +VGIS ERYHEVMR SKP++SLHARH++ Sbjct: 357 FGLESVRVEIRKAKLELMFELKRLPTDEEIVGRVGISQERYHEVMRVSKPIISLHARHSV 416 Query: 537 TQEEFINGITDTEGVGGDKRRQPAXXXXXXXXXXXXLKPKESMVIRQRYGLDGKGDRTLG 358 TQEEFINGITD +GV GD+R+QPA LKPKE++VIRQRYGLDGKGDRTLG Sbjct: 417 TQEEFINGITDVDGVEGDRRKQPALLRLALDDVLDSLKPKENLVIRQRYGLDGKGDRTLG 476 Query: 357 EIGGNLNISREMVRKHEVKALMKLKHQARVDYLRRYI 247 EI GNLNISREMVRK+EVKALMKLKH+ARVDYLRRY+ Sbjct: 477 EIAGNLNISREMVRKYEVKALMKLKHRARVDYLRRYV 513 >ref|XP_004149458.1| PREDICTED: RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like [Cucumis sativus] Length = 514 Score = 582 bits (1500), Expect = e-163 Identities = 322/522 (61%), Positives = 381/522 (72%), Gaps = 7/522 (1%) Frame = -3 Query: 1788 MGVVTVPSSASQTPLGLSARFSTHRSPLKRPVILAFNTDKTKNTALITNHEPISLPSDTP 1609 MGVVTV S+A++TP L +FS H S LKRP I+AF DK NT L++ HE ++LP ++ Sbjct: 1 MGVVTVSSAAARTPFRLGVKFSNHSSTLKRPSIVAFKADKHTNTTLVSPHEQVTLPVESN 60 Query: 1608 KEHKILRKST-KSSKRVKAVXXXXXXXXXXXXXDYSEAAAKLENIYKLSSPADISDAEDT 1432 K +T K KRVKAV Y+EAAAKLENI+KLS + SD E Sbjct: 61 NRRKKRSGNTSKPLKRVKAVLIDEATPCSLDLD-YNEAAAKLENIFKLSPMTEDSDKECK 119 Query: 1431 DRLMXXXXRTKKKVEESDEQVEKEIFHNVVRSH-KKAKRLNLDXXXXXXXXXXXEMVI-- 1261 D K+ ++ ++ +VR+ K+ KRL+LD + V Sbjct: 120 D-------GRSKRGQKRSKKSANRPGDGIVRNQTKRIKRLDLDKRIALKNKKEGKAVALL 172 Query: 1260 --SSDGK-ENNDVEGGDVERLLREYSGSTDLVSLDWKKMKIPHVLPSSEHAWLFKLMQPM 1090 D K E ++++ +++RL+R+YS STDLVSLDWKKMKIP VLPSSEH LFKL+QPM Sbjct: 173 RKQKDTKNEADEIDDDEIDRLVRDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLVQPM 232 Query: 1089 KALLQVKENLKKDMGREPTDTELAETTKMSVPKVRRQIEVGRAARNKLIRHNLRLVLFVI 910 KAL++V+E L+K +GREPT+ ELA T M+V +VRRQ+EVGRAARNKLI+HNLRLVLFVI Sbjct: 233 KALVEVQEELQKGLGREPTEGELANATNMNVIQVRRQLEVGRAARNKLIKHNLRLVLFVI 292 Query: 909 NKYFQEFASGSRFQDLCQAGVKGLITAIDRFEPKRRSRLSTYGLFWIRHSIMRSMTLSSF 730 NKYF++FASG +FQDLCQAGVKGLITAIDRFEPKR+ RLSTY LFWIRH+I+RSMTLSSF Sbjct: 293 NKYFEDFASGPKFQDLCQAGVKGLITAIDRFEPKRKFRLSTYALFWIRHAIIRSMTLSSF 352 Query: 729 TRVSFGLESVRVEIQRAKLELTFELEREPTEDEIIEKVGISPERYHEVMRASKPVLSLHA 550 TRVSFGL+SVRVEIQRAKLEL EL R PTE EI KVGIS ERY EVMRA+KPV SLH+ Sbjct: 353 TRVSFGLDSVRVEIQRAKLELLCELHRLPTEGEITAKVGISQERYLEVMRATKPVYSLHS 412 Query: 549 RHAITQEEFINGITDTEGVGGDKRRQPAXXXXXXXXXXXXLKPKESMVIRQRYGLDGKGD 370 RH+ T EE INGITD EG GGD RRQPA LKPKES+VIRQRYGLDGKG+ Sbjct: 413 RHSTTSEELINGITDVEGTGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGN 472 Query: 369 RTLGEIGGNLNISREMVRKHEVKALMKLKHQARVDYLRRYIV 244 RTLGEI GNLNISREMVRKHEVKALMKLKH ARVDYLRRY++ Sbjct: 473 RTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYLI 514 >ref|XP_003602198.1| RNA polymerase sigma factor rpoD [Medicago truncatula] gi|355491246|gb|AES72449.1| RNA polymerase sigma factor rpoD [Medicago truncatula] Length = 514 Score = 582 bits (1500), Expect = e-163 Identities = 318/517 (61%), Positives = 378/517 (73%), Gaps = 2/517 (0%) Frame = -3 Query: 1788 MGVVTVPSSASQTPLGLSARFSTHRSPLKRPVILAFNTDKTKNTALITNHEPISLPSDTP 1609 MGVVTV SSA++TPLGL+A+FSTH LKRP+ +AF DK +TAL+ E I Sbjct: 1 MGVVTVSSSAARTPLGLNAKFSTHHPVLKRPLTVAFKGDKQNDTALVATQEKIPTQVKPA 60 Query: 1608 KEHKI-LRKSTKSSKRVKAVXXXXXXXXXXXXXDYSEAAAKLENIYKLSSPADISDAEDT 1432 K HK + K+ K K+ +AV Y+EAAA LENIYKLS DI DA+ Sbjct: 61 KTHKKRIAKTNKLPKKPRAVCTEETFPSSLDVD-YNEAAAILENIYKLSPTTDICDADYI 119 Query: 1431 DRLMXXXXRTKKKVEESDEQVEKEIFHNVVRSHK-KAKRLNLDXXXXXXXXXXXEMVISS 1255 +R + R KK+ D E VVR+ K KAKR+NLD E VI + Sbjct: 120 ERKIKRVSRRGKKI--GDVSKEDSNSDRVVRNQKTKAKRMNLDERIALKTSENSEDVIPT 177 Query: 1254 DGKENNDVEGGDVERLLREYSGSTDLVSLDWKKMKIPHVLPSSEHAWLFKLMQPMKALLQ 1075 K N ++ LLREYS DLVSLDWKKMKIP VLPSSEHA+LFKLMQPMKALLQ Sbjct: 178 RKKRNPRSRVEKIDELLREYSVPADLVSLDWKKMKIPPVLPSSEHAFLFKLMQPMKALLQ 237 Query: 1074 VKENLKKDMGREPTDTELAETTKMSVPKVRRQIEVGRAARNKLIRHNLRLVLFVINKYFQ 895 VK++L+K++ REPT+ E+A+ T M +V++ IEVGRAARNKLI+HNLRLVLFVIN+YF Sbjct: 238 VKDDLQKELEREPTEDEIADATNMHTTQVKKAIEVGRAARNKLIKHNLRLVLFVINRYFS 297 Query: 894 EFASGSRFQDLCQAGVKGLITAIDRFEPKRRSRLSTYGLFWIRHSIMRSMTLSSFTRVSF 715 +FA+ RFQDLCQAGVKGLIT+IDRFEP RR RLSTY LFWIRH+I+RSMTL+SF+RV F Sbjct: 298 DFANSPRFQDLCQAGVKGLITSIDRFEPNRRFRLSTYSLFWIRHAIIRSMTLASFSRVPF 357 Query: 714 GLESVRVEIQRAKLELTFELEREPTEDEIIEKVGISPERYHEVMRASKPVLSLHARHAIT 535 GLESVR EI+RAK+EL+F+L+R PTE+EIIEKV +SPERY +VM+ASKP+LSLH+RH T Sbjct: 358 GLESVRAEIRRAKIELSFQLQRSPTEEEIIEKVHVSPERYRDVMKASKPLLSLHSRHLTT 417 Query: 534 QEEFINGITDTEGVGGDKRRQPAXXXXXXXXXXXXLKPKESMVIRQRYGLDGKGDRTLGE 355 QEEFING+ D GV GD RRQPA LKPKE++VIRQR+GLDGKGDRTLGE Sbjct: 418 QEEFINGVVDDGGVDGDNRRQPALLRLALDDVLDSLKPKENLVIRQRFGLDGKGDRTLGE 477 Query: 354 IGGNLNISREMVRKHEVKALMKLKHQARVDYLRRYIV 244 I NLNISREMVRKHEVKALMKLKH AR+DYLRRY+V Sbjct: 478 IASNLNISREMVRKHEVKALMKLKHSARLDYLRRYVV 514 >ref|XP_006581623.1| PREDICTED: RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like isoform X2 [Glycine max] Length = 507 Score = 580 bits (1495), Expect = e-163 Identities = 320/520 (61%), Positives = 389/520 (74%), Gaps = 5/520 (0%) Frame = -3 Query: 1788 MGVVTVPSSASQTPLGLSARFSTHRSPLKRPVILAFNTDKTKNTALITNHEPISLPSDTP 1609 MGVVTV SSA++TPLGL+ +F +R LKRP+I+AF DK ++AL+ E I +P +T Sbjct: 1 MGVVTVSSSAARTPLGLNTKFCNNR--LKRPLIVAFKGDKHNDSALVATQEKIPVPVETA 58 Query: 1608 K--EHKILRKSTKSSKRVKAVXXXXXXXXXXXXXDYSEAAAKLENIYKLSSPADISDAED 1435 K + K + K+ K KR + DY+EAAA LEN+YKLS +D ++ D Sbjct: 59 KKTQKKRIGKTNKLPKRESS--------PSSMDVDYNEAAAMLENLYKLSPASDNAECID 110 Query: 1434 TDRLMXXXXRTKKKVEESDEQVEKEIFHNVVRS---HKKAKRLNLDXXXXXXXXXXXEMV 1264 ++ R KK V+ES+E+ K + VVR+ +KK KRLNLD + V Sbjct: 111 -GKIKRVSRRGKKVVDESEEKELKGDW--VVRNQNKNKKPKRLNLDQRISLKNNKSGDEV 167 Query: 1263 ISSDGKENNDVEGGDVERLLREYSGSTDLVSLDWKKMKIPHVLPSSEHAWLFKLMQPMKA 1084 I + K N + +E L+REYS STD VS+DWK+M+IP VL SSEHAWLFKLMQPMKA Sbjct: 168 IPTRKKRNVGNKIEKIEELIREYSVSTDFVSMDWKRMRIPPVLSSSEHAWLFKLMQPMKA 227 Query: 1083 LLQVKENLKKDMGREPTDTELAETTKMSVPKVRRQIEVGRAARNKLIRHNLRLVLFVINK 904 LLQVKE+L++++ REP D ELA+ T MS+ +VR+ I+VG+AARNKLI+HNLRLVLFVINK Sbjct: 228 LLQVKEDLQQELTREPADGELADATNMSITQVRKAIDVGQAARNKLIKHNLRLVLFVINK 287 Query: 903 YFQEFASGSRFQDLCQAGVKGLITAIDRFEPKRRSRLSTYGLFWIRHSIMRSMTLSSFTR 724 YF +FASG RFQDLCQAGVKGLITAIDRFEP RR RLSTY LFWIRH+I+RSMTLS+FTR Sbjct: 288 YFTDFASGPRFQDLCQAGVKGLITAIDRFEPNRRFRLSTYSLFWIRHAIIRSMTLSNFTR 347 Query: 723 VSFGLESVRVEIQRAKLELTFELEREPTEDEIIEKVGISPERYHEVMRASKPVLSLHARH 544 V FGLESVR EIQ+AK ELTFEL+R PTE+EIIE+V ISPERYH+V++ASK +LSL++RH Sbjct: 348 VPFGLESVRAEIQKAKTELTFELQRSPTEEEIIERVHISPERYHDVIKASKSILSLNSRH 407 Query: 543 AITQEEFINGITDTEGVGGDKRRQPAXXXXXXXXXXXXLKPKESMVIRQRYGLDGKGDRT 364 TQEEFINGI D +GV GD R+QPA LKPKES+VIRQR+GLDGKGDRT Sbjct: 408 TTTQEEFINGIVDDDGVNGDNRKQPALLRLALDDVLDSLKPKESLVIRQRFGLDGKGDRT 467 Query: 363 LGEIGGNLNISREMVRKHEVKALMKLKHQARVDYLRRYIV 244 LGEI GNLNISREMVRKHEVKALMKLKH AR+DYLRRY+V Sbjct: 468 LGEIAGNLNISREMVRKHEVKALMKLKHSARLDYLRRYVV 507 >ref|XP_006578934.1| PREDICTED: RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like [Glycine max] Length = 509 Score = 580 bits (1495), Expect = e-163 Identities = 320/521 (61%), Positives = 383/521 (73%), Gaps = 6/521 (1%) Frame = -3 Query: 1788 MGVVTVPSSASQTPLGLSARFSTHRSPLKRPVILAFNTDKTKNTALITNHEPISLPSDTP 1609 MGVVTV SAS+TPLG + +FSTHR LKRP+I+AF DK ++AL+ E I +P +T Sbjct: 1 MGVVTVSGSASRTPLGFNTKFSTHR--LKRPLIVAFKGDKHNDSALVATQEKIPVPVETA 58 Query: 1608 K--EHKILRKSTKSSKRVKAVXXXXXXXXXXXXXDYSEAAAKLENIYKLSSPADISDAED 1435 K + K + KS K KR + DY+EAAA LENIYKLS + +AE Sbjct: 59 KKTQKKRIGKSNKLPKRESS--------PSSMDVDYNEAAAMLENIYKLSPASHTGNAEC 110 Query: 1434 TD-RLMXXXXRTKKKVEESDEQVEKEIFHNVVR---SHKKAKRLNLDXXXXXXXXXXXEM 1267 D ++ R KK V+ES+E+ K VVR +KKAKRL LD + Sbjct: 111 IDDKIKRVSRRGKKVVDESEEKELKG--DRVVRRQNKNKKAKRLTLDQRISLKNNKRGDE 168 Query: 1266 VISSDGKENNDVEGGDVERLLREYSGSTDLVSLDWKKMKIPHVLPSSEHAWLFKLMQPMK 1087 VI + K N +E L+REYS S D +S+DWK+M+IP VL SSEHAWLFKLMQPMK Sbjct: 169 VIPTRKKRNFRNRIEKIEELIREYSVSNDFISMDWKRMRIPPVLSSSEHAWLFKLMQPMK 228 Query: 1086 ALLQVKENLKKDMGREPTDTELAETTKMSVPKVRRQIEVGRAARNKLIRHNLRLVLFVIN 907 ALLQVKE+L+K++ REP D ELA+ T MS+ +V++ I+VG+AARNKLI+HNLRLVLFVIN Sbjct: 229 ALLQVKEDLQKELAREPADGELADATNMSITQVKKAIDVGQAARNKLIKHNLRLVLFVIN 288 Query: 906 KYFQEFASGSRFQDLCQAGVKGLITAIDRFEPKRRSRLSTYGLFWIRHSIMRSMTLSSFT 727 KYF +FASG RFQDLCQAGVKGLITAIDRFEP RR RLSTY LFWIRH+I+RSMTLSSF Sbjct: 289 KYFTDFASGPRFQDLCQAGVKGLITAIDRFEPNRRFRLSTYSLFWIRHAIIRSMTLSSFI 348 Query: 726 RVSFGLESVRVEIQRAKLELTFELEREPTEDEIIEKVGISPERYHEVMRASKPVLSLHAR 547 RV FGLESVR EIQ+AK ELTF+L+R PTE+EIIE+V ISPERYH++++ASK +LSL++R Sbjct: 349 RVPFGLESVRAEIQKAKTELTFKLQRSPTEEEIIERVHISPERYHDIIKASKSILSLNSR 408 Query: 546 HAITQEEFINGITDTEGVGGDKRRQPAXXXXXXXXXXXXLKPKESMVIRQRYGLDGKGDR 367 H TQEEFINGI D +GV GD R+QPA LKPKES+VIRQR+GLDGKGDR Sbjct: 409 HTTTQEEFINGIVDDDGVNGDNRKQPALLRLALDDVLDSLKPKESLVIRQRFGLDGKGDR 468 Query: 366 TLGEIGGNLNISREMVRKHEVKALMKLKHQARVDYLRRYIV 244 TLGEI GNLNISREMVRKHEVKALMKL H AR+DYLRRY+V Sbjct: 469 TLGEIAGNLNISREMVRKHEVKALMKLNHSARLDYLRRYVV 509 >ref|XP_004166500.1| PREDICTED: RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like [Cucumis sativus] Length = 515 Score = 578 bits (1489), Expect = e-162 Identities = 321/523 (61%), Positives = 378/523 (72%), Gaps = 8/523 (1%) Frame = -3 Query: 1788 MGVVTVPSSASQTPLGLSARFSTHRSPLKRPVILAFNTDKTKNTALITNHEPISLPSDTP 1609 MGVVTV S+A++TP L +FS H S LKRP I+AF DK NT L++ HE ++LP ++ Sbjct: 1 MGVVTVSSAAARTPFRLGVKFSNHSSTLKRPSIVAFKADKHTNTTLVSPHEQVTLPVESN 60 Query: 1608 KEHKILRKST-KSSKRVKAVXXXXXXXXXXXXXDYSEAAAKLENIYKLSSPADISDAEDT 1432 K +T K KRVKAV Y+EAAAKLENI+KLS + SD E Sbjct: 61 NRRKKRSGNTSKPLKRVKAVLIDEATPCSLDLD-YNEAAAKLENIFKLSPMTEDSDKECK 119 Query: 1431 DRLMXXXXRTKKKVEESDEQVEKEIFHNVVRSH-KKAKRLNLDXXXXXXXXXXXEM---- 1267 D K+ ++ ++ +VR+ K+ KRL+LD + Sbjct: 120 D-------GRSKRGQKRSKKSANRPGDGIVRNQTKRIKRLDLDKRIALKNKRKAKRNKEG 172 Query: 1266 --VISSDGKENNDVEGGDVERLLREYSGSTDLVSLDWKKMKIPHVLPSSEHAWLFKLMQP 1093 V S ++ E +++RL+R+YS STDLVSLDWKKMKIP VLPSSEH LFKL+QP Sbjct: 173 KAVPSLRKQKETKNEDDEIDRLVRDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLVQP 232 Query: 1092 MKALLQVKENLKKDMGREPTDTELAETTKMSVPKVRRQIEVGRAARNKLIRHNLRLVLFV 913 MKAL++V+E L+K +GREPT+ ELA T M+V +VRRQ+EVGRAARNKLI+HNLRLVLFV Sbjct: 233 MKALVEVQEELQKGLGREPTEGELANATNMNVIQVRRQLEVGRAARNKLIKHNLRLVLFV 292 Query: 912 INKYFQEFASGSRFQDLCQAGVKGLITAIDRFEPKRRSRLSTYGLFWIRHSIMRSMTLSS 733 INKYF++FASG +FQDLCQAGVKGLITAIDRFEPKR+ RLSTY LFWIRH+I+RSMTLSS Sbjct: 293 INKYFEDFASGPKFQDLCQAGVKGLITAIDRFEPKRKFRLSTYALFWIRHAIIRSMTLSS 352 Query: 732 FTRVSFGLESVRVEIQRAKLELTFELEREPTEDEIIEKVGISPERYHEVMRASKPVLSLH 553 FTRVSFGL+SVRVEIQRAKLEL EL R PTE EI KVGIS ERY EVMRA+KPV SLH Sbjct: 353 FTRVSFGLDSVRVEIQRAKLELLCELHRLPTEGEITAKVGISQERYLEVMRATKPVYSLH 412 Query: 552 ARHAITQEEFINGITDTEGVGGDKRRQPAXXXXXXXXXXXXLKPKESMVIRQRYGLDGKG 373 +RH+ T EE INGITD EG GGD RRQPA LKPKES+VIRQRYGLDGKG Sbjct: 413 SRHSTTSEELINGITDVEGTGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKG 472 Query: 372 DRTLGEIGGNLNISREMVRKHEVKALMKLKHQARVDYLRRYIV 244 +RTLGEI GNLNISREMVRKHEVKALMKLKH ARVDYLRRY++ Sbjct: 473 NRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYLI 515 >ref|NP_001276145.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like [Glycine max] gi|382365034|dbj|BAM05478.1| sigma-like factor 5B [Glycine max] Length = 507 Score = 578 bits (1489), Expect = e-162 Identities = 319/520 (61%), Positives = 388/520 (74%), Gaps = 5/520 (0%) Frame = -3 Query: 1788 MGVVTVPSSASQTPLGLSARFSTHRSPLKRPVILAFNTDKTKNTALITNHEPISLPSDTP 1609 MGVVTV SSA++TPLGL+ +F +R LKRP+I+AF DK ++AL+ E I +P +T Sbjct: 1 MGVVTVSSSAARTPLGLNTKFCNNR--LKRPLIVAFKGDKHNDSALVATQEKIPVPVETA 58 Query: 1608 K--EHKILRKSTKSSKRVKAVXXXXXXXXXXXXXDYSEAAAKLENIYKLSSPADISDAED 1435 K + K + K+ K KR + DY+EAAA LEN+YKLS +D ++ D Sbjct: 59 KKTQKKRIGKTNKLPKRESS--------PSSMDVDYNEAAAMLENLYKLSPASDNAECID 110 Query: 1434 TDRLMXXXXRTKKKVEESDEQVEKEIFHNVVRS---HKKAKRLNLDXXXXXXXXXXXEMV 1264 ++ R KK V+ES+E+ K + VVR+ +KK KRLNLD + V Sbjct: 111 -GKIKRVSRRGKKVVDESEEKELKGDW--VVRNQNKNKKPKRLNLDQRISLKNNKSGDEV 167 Query: 1263 ISSDGKENNDVEGGDVERLLREYSGSTDLVSLDWKKMKIPHVLPSSEHAWLFKLMQPMKA 1084 I + K N + +E L+REYS STD VS+DWK+M+IP VL SSEHAWLFKLMQPMKA Sbjct: 168 IPTRKKRNVGNKIEKIEELIREYSVSTDFVSMDWKRMRIPPVLSSSEHAWLFKLMQPMKA 227 Query: 1083 LLQVKENLKKDMGREPTDTELAETTKMSVPKVRRQIEVGRAARNKLIRHNLRLVLFVINK 904 LLQVKE+L++++ REP D ELA+ T MS+ +VR+ I+VG+AARNKLI+HNLRLVLFVINK Sbjct: 228 LLQVKEDLQQELTREPADGELADATNMSITQVRKAIDVGQAARNKLIKHNLRLVLFVINK 287 Query: 903 YFQEFASGSRFQDLCQAGVKGLITAIDRFEPKRRSRLSTYGLFWIRHSIMRSMTLSSFTR 724 YF +FASG RFQDLCQAGVKGLITAIDRFEP RR RLSTY LFWIRH+I+RSMTLS+FTR Sbjct: 288 YFTDFASGPRFQDLCQAGVKGLITAIDRFEPNRRFRLSTYSLFWIRHAIIRSMTLSNFTR 347 Query: 723 VSFGLESVRVEIQRAKLELTFELEREPTEDEIIEKVGISPERYHEVMRASKPVLSLHARH 544 V FGLESVR EIQ+AK ELTFEL+R PTE+EIIE+V ISPERYH+V++ASK +LSL++RH Sbjct: 348 VPFGLESVRAEIQKAKTELTFELQRSPTEEEIIERVHISPERYHDVIKASKSILSLNSRH 407 Query: 543 AITQEEFINGITDTEGVGGDKRRQPAXXXXXXXXXXXXLKPKESMVIRQRYGLDGKGDRT 364 TQEEFINGI D +GV GD R+QPA LKPKES+VIR R+GLDGKGDRT Sbjct: 408 TTTQEEFINGIVDDDGVNGDNRKQPALLRLALDDVLDSLKPKESLVIRXRFGLDGKGDRT 467 Query: 363 LGEIGGNLNISREMVRKHEVKALMKLKHQARVDYLRRYIV 244 LGEI GNLNISREMVRKHEVKALMKLKH AR+DYLRRY+V Sbjct: 468 LGEIAGNLNISREMVRKHEVKALMKLKHSARLDYLRRYVV 507