BLASTX nr result
ID: Akebia26_contig00026195
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Akebia26_contig00026195 (921 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis] 281 2e-73 emb|CAN80304.1| hypothetical protein VITISV_017821 [Vitis vinifera] 268 2e-69 emb|CAN74382.1| hypothetical protein VITISV_007945 [Vitis vinifera] 263 6e-68 emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera] 260 5e-67 emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera] 258 2e-66 dbj|BAB02145.1| copia-like retroelement pol polyprotein-like [Ar... 254 4e-65 gb|AAD17414.1| copia-like retroelement pol polyprotein [Arabidop... 251 2e-64 gb|AAK38381.1|AC079028_5 polyprotein, putative [Arabidopsis thal... 251 2e-64 emb|CAA31653.1| polyprotein [Arabidopsis thaliana] 251 3e-64 dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsi... 251 3e-64 pir||S23319 hypothetical protein 2 - Arabidopsis thaliana retrot... 247 4e-63 emb|CAA20201.1| putative transposable element [Arabidopsis thali... 246 9e-63 gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 245 2e-62 gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group... 245 2e-62 gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Ar... 242 1e-61 gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118... 241 3e-61 gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group] 240 7e-61 gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc... 240 7e-61 gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc... 239 1e-60 emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group] 239 1e-60 >emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis] Length = 1334 Score = 281 bits (720), Expect = 2e-73 Identities = 149/311 (47%), Positives = 199/311 (63%), Gaps = 10/311 (3%) Frame = +3 Query: 3 GIPPSYDNLRICGCVAYAHTKEGKLEPRARKCMFVSYPEGVKGYKLWCQNKHISKCFISR 182 G P +Y NLR+ GC AY H +GKLE RA K +FV YP+GVKGYK+WC+++ KC +SR Sbjct: 641 GKPANYQNLRVFGCPAYLHINQGKLEARALKGVFVGYPDGVKGYKIWCKDQ--GKCIVSR 698 Query: 183 DVVFKVDEYYLKENGESSTSASSDHDA-------CAGIEVELADRTENQ*DYRLXXXXXX 341 DVVF + LKE+ E + A + + VEL ++ + Sbjct: 699 DVVFH-ESVLLKESAEHDAGLQDNPAANKRSGSETSKVNVELLTDKSSEKEAASDDERAT 757 Query: 342 XXXXXXXXXXXALAD---YQLARDRTRRTRVAPTRYGYADLISFALLTAETLEKNELASY 512 AD YQLARDR RR AP RYGYADLI++ALL A+ + E A++ Sbjct: 758 AESEEHEVSELPQADLQNYQLARDRVRREVRAPVRYGYADLIAYALLCADEVTIEEPANF 817 Query: 513 EEACKCKERKEWRQAMQEEMDSLLKNKTWELVDKPVGQRLVSCKWIYKLKEDGSKDGKPR 692 EA + +W +AMQ+EM+SL +N+TW L+ P +RL++CKWI+K E P+ Sbjct: 818 SEAMESVHCDKWLEAMQDEMESLQRNQTWTLIPNPGNKRLINCKWIFKRNEGIPDVEPPK 877 Query: 693 FKARLMARGFTQQAGIDFNEVFSPVVKHTSIRVLLALVTQFDMELEQMDVKTTFLHGNLD 872 +KARL+ARGFTQ+ G+DFNE+FSPVVKH+SIR+LLA+V D+ELEQMDVKT FLHGNL+ Sbjct: 878 YKARLVARGFTQREGVDFNEIFSPVVKHSSIRILLAMVALLDLELEQMDVKTAFLHGNLE 937 Query: 873 EKIFMSQPKGF 905 E+I M+QP+GF Sbjct: 938 EQILMAQPEGF 948 >emb|CAN80304.1| hypothetical protein VITISV_017821 [Vitis vinifera] Length = 939 Score = 268 bits (685), Expect = 2e-69 Identities = 145/303 (47%), Positives = 187/303 (61%) Frame = +3 Query: 9 PPSYDNLRICGCVAYAHTKEGKLEPRARKCMFVSYPEGVKGYKLWCQNKHISKCFISRDV 188 P Y LR GC+AYAH EGKLEPRARKC+FV Y +GVKG KLWC KCFISRDV Sbjct: 322 PCDYSKLRTFGCIAYAHQNEGKLEPRARKCIFVGYSDGVKGCKLWCPTT--KKCFISRDV 379 Query: 189 VFKVDEYYLKENGESSTSASSDHDACAGIEVELADRTENQ*DYRLXXXXXXXXXXXXXXX 368 F+ E+ LK + E + + E+ D+ E + Sbjct: 380 DFRECEF-LKNDREVFINKENG---------EVKDKFETK----------------PQQY 413 Query: 369 XXALADYQLARDRTRRTRVAPTRYGYADLISFALLTAETLEKNELASYEEACKCKERKEW 548 L +YQL RD RR+ P R+GY D+++++L E L E +Y EA CK+ +W Sbjct: 414 DIPLENYQLTRDGARRSIRPPQRFGYNDMVAYSLSIGEELSCAEPKNYLEAISCKDSPKW 473 Query: 549 RQAMQEEMDSLLKNKTWELVDKPVGQRLVSCKWIYKLKEDGSKDGKPRFKARLMARGFTQ 728 AMQEE +SLLKN TW+LVDKP G ++V CKW++K K RFKA L+A+ +TQ Sbjct: 474 MTAMQEEFESLLKNGTWQLVDKPKGCKVVGCKWVFKKKLGIPHVEPERFKATLVAKAYTQ 533 Query: 729 QAGIDFNEVFSPVVKHTSIRVLLALVTQFDMELEQMDVKTTFLHGNLDEKIFMSQPKGFV 908 + G+DFNE+FSP+VKHTSIRVLLALV+ +++EL QMDV FLHG L+E+IFM QPKGF+ Sbjct: 534 REGMDFNEIFSPMVKHTSIRVLLALVSLWNLELXQMDVNRAFLHGELEEEIFMQQPKGFI 593 Query: 909 KHG 917 G Sbjct: 594 VKG 596 >emb|CAN74382.1| hypothetical protein VITISV_007945 [Vitis vinifera] Length = 444 Score = 263 bits (673), Expect = 6e-68 Identities = 144/300 (48%), Positives = 191/300 (63%) Frame = +3 Query: 18 YDNLRICGCVAYAHTKEGKLEPRARKCMFVSYPEGVKGYKLWCQNKHISKCFISRDVVFK 197 Y NLR G +AYAH EGKLEPRARKC+FV Y +GVKG KLWC KCFIS DVVF+ Sbjct: 43 YSNLRTFGYIAYAHQNEGKLEPRARKCIFVGYLDGVKGNKLWCPTT--KKCFISMDVVFR 100 Query: 198 VDEYYLKENGESSTSASSDHDACAGIEVELADRTENQ*DYRLXXXXXXXXXXXXXXXXXA 377 E+ LK++ E+ST+ + E+ D+ E Q + + Sbjct: 101 ECEF-LKDDRETSTNKENG---------EVKDKLEFQMELK-DKIDATEFEIEPQQYDIP 149 Query: 378 LADYQLARDRTRRTRVAPTRYGYADLISFALLTAETLEKNELASYEEACKCKERKEWRQA 557 L +YQL RDR R++ R+GY D+++ +L + L E +Y E CK+ +W A Sbjct: 150 LENYQLTRDRARKSIRPLQRFGYNDMVACSLSIGKELRCAEPKNYLETVSCKDSPKWMNA 209 Query: 558 MQEEMDSLLKNKTWELVDKPVGQRLVSCKWIYKLKEDGSKDGKPRFKARLMARGFTQQAG 737 MQEE +SL +N T LVDKP G ++V CKW++K K RFKARL+A+G+TQ+ G Sbjct: 210 MQEEFESLFQNGTRLLVDKPKGCKVVGCKWVFKKKLGIPGVEPERFKARLVAKGYTQREG 269 Query: 738 IDFNEVFSPVVKHTSIRVLLALVTQFDMELEQMDVKTTFLHGNLDEKIFMSQPKGFVKHG 917 +DFNE+FSP VKHTSI VLLALV+ +++E+EQMDVKTTFLHG L+E+IFM QP+GF+ G Sbjct: 270 VDFNEIFSPAVKHTSIGVLLALVSLWNLEIEQMDVKTTFLHGELEEEIFMQQPEGFIVKG 329 >emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera] Length = 1562 Score = 260 bits (665), Expect = 5e-67 Identities = 140/310 (45%), Positives = 190/310 (61%), Gaps = 8/310 (2%) Frame = +3 Query: 3 GIPPSYDNLRICGCVAYAHTKEGKLEPRARKCMFVSYPEGVKGYKLWCQNKHISKCFISR 182 G P +Y L+I GC AYAH +GKLEPRA KC+F+ Y GVKGY+LWC K ISR Sbjct: 750 GKPSNYSGLKIFGCPAYAHVSDGKLEPRAMKCIFLGYATGVKGYRLWCTEDRTPKFIISR 809 Query: 183 DVVFKVDEYY--LKENGESSTSASSDHDACAGIEVELADRTENQ*DYRLXXXXXXXXXXX 356 DV F + KE G+ + ++ +D A +E E+ EN D Sbjct: 810 DVTFDESAMFGQRKEFGDLAGTSKTDLGANQKVEFEVDAPMENGVDDTSEEQPVIDQND- 868 Query: 357 XXXXXXALADYQLARDRTRRTRVAPTRY------GYADLISFALLTAETLEKNELASYEE 518 +A R RR P RY + ++FAL AE + + E SY+E Sbjct: 869 ---------SQSIAAHRPRREIRRPMRYVDCVSANITNPVAFALAVAEEIGREEPRSYKE 919 Query: 519 ACKCKERKEWRQAMQEEMDSLLKNKTWELVDKPVGQRLVSCKWIYKLKEDGSKDGKPRFK 698 A + K+ K+W +M +EM SL KN+TWELV P G + V CKW++K+K+ S D P++K Sbjct: 920 AMESKDSKKWLSSMDDEMASLRKNQTWELVPLPEGVKPVDCKWLFKIKDGISXDEPPKYK 979 Query: 699 ARLMARGFTQQAGIDFNEVFSPVVKHTSIRVLLALVTQFDMELEQMDVKTTFLHGNLDEK 878 +RL+A+GF+Q+ GID+NEVFSPVVKH SIRVLLA+V+ F++EL+Q+DVKT FLHGNL+E+ Sbjct: 980 SRLVAKGFSQKEGIDYNEVFSPVVKHKSIRVLLAMVSVFNLELDQLDVKTAFLHGNLEEE 1039 Query: 879 IFMSQPKGFV 908 I+M QP+GFV Sbjct: 1040 IYMKQPEGFV 1049 >emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera] Length = 1208 Score = 258 bits (660), Expect = 2e-66 Identities = 134/302 (44%), Positives = 182/302 (60%), Gaps = 3/302 (0%) Frame = +3 Query: 3 GIPPSYDNLRICGCVAYAHTKEGKLEPRARKCMFVSYPEGVKGYKLWCQNKHISKCFISR 182 G Y +L++ GC AY HTK KLEPRA KC+F+ YP+GVKGYKLW + + KC ISR Sbjct: 609 GKAADYQHLKVFGCTAYVHTKTDKLEPRAVKCIFLGYPKGVKGYKLWIETQGKGKCIISR 668 Query: 183 DVVFKVDEYYLKENGESSTSASSDHDACAGIEVELADRT---ENQ*DYRLXXXXXXXXXX 353 DV F E S + + D + ++ E+ T E + Sbjct: 669 DVTFN-------EQDMSKQTPAKDVEGLDQLQFEVEHETLQPEKSKETSSKTAQEEIVHE 721 Query: 354 XXXXXXXALADYQLARDRTRRTRVAPTRYGYADLISFALLTAETLEKNELASYEEACKCK 533 L Y L RDR +R P RYG A++ +FAL AE + E +Y+EA Sbjct: 722 RQNEPTQGLESYNLVRDRQKRQVKPPKRYGQAEMTAFALSVAEEIVDMEPKTYQEAINSN 781 Query: 534 ERKEWRQAMQEEMDSLLKNKTWELVDKPVGQRLVSCKWIYKLKEDGSKDGKPRFKARLMA 713 E +W +A+QEEMDSL KN+TWELV KP +++V KW++K K+ + PR+KARL+A Sbjct: 782 EADQWVKAIQEEMDSLRKNETWELVTKPKDRKVVGSKWVFKRKQGTLGNEAPRYKARLVA 841 Query: 714 RGFTQQAGIDFNEVFSPVVKHTSIRVLLALVTQFDMELEQMDVKTTFLHGNLDEKIFMSQ 893 +GF+Q+ G+D+NE+FSPVVKH+SIR+LLA V D+EL+Q+DVKT FLHG LDE I+M Sbjct: 842 KGFSQKEGVDYNEIFSPVVKHSSIRLLLAFVAHEDLELDQLDVKTAFLHGELDELIYMQP 901 Query: 894 PK 899 P+ Sbjct: 902 PE 903 >dbj|BAB02145.1| copia-like retroelement pol polyprotein-like [Arabidopsis thaliana] Length = 348 Score = 254 bits (648), Expect = 4e-65 Identities = 144/327 (44%), Positives = 197/327 (60%), Gaps = 21/327 (6%) Frame = +3 Query: 3 GIPPSYDNLRICGCVAYAHTKEGKLEPRARKCMFVSYPEGVKGYKLWCQNKHISKCFISR 182 G P +LR C AY H + K PRA K +F+ YP G+KGY++W + KC SR Sbjct: 41 GTKPDLSHLRRFECSAYVHVTQDKTSPRAVKGVFMGYPFGIKGYRVWLPEE--GKCTTSR 98 Query: 183 DVVF---------------KVDEYYLKEN----GESSTSASSDHDACAGIEV-ELADRTE 302 +VVF + D Y L+++ GE+S+S+S + E E D +E Sbjct: 99 NVVFNEIELYKGTLSSPDGRTDYYDLEDSSSQGGETSSSSSESSENLEESETNEEVDGSE 158 Query: 303 NQ*DYRLXXXXXXXXXXXXXXXXXALADYQLARDRTRRTRVAP-TRYGYADLISFALLTA 479 N+ +L DY LAR+R RR+ + P +R+ D +++AL T Sbjct: 159 NE---------------------QSLDDYLLARERKRRSNIRPPSRFKDGDFVAYALATE 197 Query: 480 ETLEKNELASYEEACKCKERKEWRQAMQEEMDSLLKNKTWELVDKPVGQRLVSCKWIYKL 659 E LE E SYEEA K +RK+W AM+EEMDS K+ TW+L++KP Q+L+ CKWI+KL Sbjct: 198 EDLEIEEPKSYEEAMKRSKRKQWESAMKEEMDSHQKSHTWDLIEKPEKQKLIGCKWIFKL 257 Query: 660 KEDGSKDGKPRFKARLMARGFTQQAGIDFNEVFSPVVKHTSIRVLLALVTQFDMELEQMD 839 K K R+K RL+A+GF+QQ GID+NEVFS VVKH SIR++L+LV D ELEQMD Sbjct: 258 KPGIPGLEKQRYKVRLVAKGFSQQEGIDYNEVFSLVVKHVSIRLMLSLVVNMDYELEQMD 317 Query: 840 VKTTFLHGNLDEKIFMSQPKGFVKHGD 920 VKT+FLHGNL+E+I MSQP+GF++ G+ Sbjct: 318 VKTSFLHGNLEERILMSQPEGFIQEGN 344 >gb|AAD17414.1| copia-like retroelement pol polyprotein [Arabidopsis thaliana] Length = 1166 Score = 251 bits (642), Expect = 2e-64 Identities = 143/335 (42%), Positives = 188/335 (56%), Gaps = 29/335 (8%) Frame = +3 Query: 3 GIPPSYDNLRICGCVAYAHTKEGKLEPRARKCMFVSYPEGVKGYKLWCQNKHISKCFISR 182 G P +LR GC AY H + K PRA K +F+ YP G+KGY++W + KC SR Sbjct: 540 GTKPDLSHLRRFGCSAYVHVTQDKTSPRAVKGVFMGYPCGIKGYRVWLPKE--GKCTTSR 597 Query: 183 DVVFKVDEYYL---------KENGESSTS--------ASSDHDACAGIEVELAD------ 293 +VVF E Y KE E S HD G D Sbjct: 598 NVVFNETELYKDTLSSADERKEEAEKEYKKLKKARKRVSFSHDLLRGPSTSCCDLDDSSS 657 Query: 294 -----RTENQ*DYRLXXXXXXXXXXXXXXXXXALADYQLARDRTRRTRVAP-TRYGYADL 455 + + +L DY LARD RR+ + P +R+ D Sbjct: 658 QGGETSSSSSESSENLEESEMNEEVVGSENEQSLDDYLLARDMKRRSNIRPPSRFEDEDF 717 Query: 456 ISFALLTAETLEKNELASYEEACKCKERKEWRQAMQEEMDSLLKNKTWELVDKPVGQRLV 635 +++AL TAE LE+ E SYEEA K +RK+W AM+EEMDS K+ TW+L++KP Q+L+ Sbjct: 718 VAYALATAEDLEEEEPKSYEEALKSSKRKQWENAMKEEMDSHKKSHTWDLIEKPEKQKLI 777 Query: 636 SCKWIYKLKEDGSKDGKPRFKARLMARGFTQQAGIDFNEVFSPVVKHTSIRVLLALVTQF 815 CKWI+KLK K R+KARL+A+GF+QQ GID+NEVFS VVKH SIR++L+L+ Sbjct: 778 GCKWIFKLKPGIPGVEKQRYKARLVAKGFSQQEGIDYNEVFSLVVKHVSIRLMLSLMVNM 837 Query: 816 DMELEQMDVKTTFLHGNLDEKIFMSQPKGFVKHGD 920 D ELEQMDVKT FLHGNL+E+I MSQP+GF++ G+ Sbjct: 838 DYELEQMDVKTAFLHGNLEERILMSQPEGFIQEGN 872 >gb|AAK38381.1|AC079028_5 polyprotein, putative [Arabidopsis thaliana] Length = 855 Score = 251 bits (642), Expect = 2e-64 Identities = 136/319 (42%), Positives = 189/319 (59%), Gaps = 20/319 (6%) Frame = +3 Query: 12 PSYDNLRICGCVAYAHTKEGKLEPRARKCMFVSYPEGVKGYKLWCQNKHISKCFISRDVV 191 P Y +LR VAY H +GKL+PRA K +F+ YP G KGYK+W + KC ISR+V+ Sbjct: 342 PGYKHLRRLRAVAYVHVDQGKLKPRAIKGIFIGYPSGTKGYKVWLLEEQ--KCVISRNVI 399 Query: 192 FKVDEYYLKENGE-------------------SSTSASSDHDACAGIE-VELADRTENQ* 311 F+ + Y N + S T SD IE E +D + Q Sbjct: 400 FQEEVVYKDLNDKETVVKKEDIRTQTDNHLVISKTKEVSDQGGVTHIEECEESDENDEQ- 458 Query: 312 DYRLXXXXXXXXXXXXXXXXXALADYQLARDRTRRTRVAPTRYGYADLISFALLTAETLE 491 +LA+YQLA+DR RR P R+ ++FAL+ E+L Sbjct: 459 -----EPETVNETDPTVESEGSLANYQLAKDRVRRQINPPARFTEESGVAFALVVVESLS 513 Query: 492 KNELASYEEACKCKERKEWRQAMQEEMDSLLKNKTWELVDKPVGQRLVSCKWIYKLKEDG 671 E SY+EA + KE +W+ A EEMDSL+KN TW+LVDKP ++++ C+W++KLK Sbjct: 514 LEEPESYQEATQDKEWLKWKNATHEEMDSLIKNGTWDLVDKPTNRKIIGCRWLFKLKSGI 573 Query: 672 SKDGKPRFKARLMARGFTQQAGIDFNEVFSPVVKHTSIRVLLALVTQFDMELEQMDVKTT 851 RFKARL+A+G+TQ+ G+D+ E+F+PVVKHTSIRVL+++V DMELEQMDVKT Sbjct: 574 PGVEPVRFKARLVAKGYTQREGVDYQEIFAPVVKHTSIRVLMSVVVDQDMELEQMDVKTA 633 Query: 852 FLHGNLDEKIFMSQPKGFV 908 FLHG+L+E+++M QP+GF+ Sbjct: 634 FLHGDLEEELYMEQPEGFI 652 >emb|CAA31653.1| polyprotein [Arabidopsis thaliana] Length = 1291 Score = 251 bits (641), Expect = 3e-64 Identities = 135/316 (42%), Positives = 192/316 (60%), Gaps = 17/316 (5%) Frame = +3 Query: 12 PSYDNLRICGCVAYAHTKEGKLEPRARKCMFVSYPEGVKGYKLWCQNKHISKCFISRDVV 191 P Y +LR G +AY H +GKL+PRA K +F+ YP G KGYK+W +H KC ISR+V+ Sbjct: 669 PGYKHLRRFGSIAYVHIDQGKLKPRALKGIFIGYPAGTKGYKIWLLEEH--KCVISRNVL 726 Query: 192 FKVDEYYL----KENGESSTSASSDHDACAGIEV------------ELADRTENQ*DYRL 323 F + Y KE S + + H I+V +++D E+ Sbjct: 727 FHEESVYKDTMKKERVVESEAEPASHSKSTLIKVKTPGNLNSGEVIQVSDEEESDESVEE 786 Query: 324 XXXXXXXXXXXXXXXXXALADYQLARDRTRRTRVAPTRYGYADLISFALLTAETLEKNEL 503 +LA+YQLARDR RR P R+ ++FAL+T ETL E Sbjct: 787 EQEPETQVELPETQTTSSLANYQLARDRERRQIHPPARFTEESGVAFALVTVETLSMEEP 846 Query: 504 ASYEEACKCKERKEWRQAMQEEMDSLLKNKTWELVDKPVGQRLVSCKWIYKLKEDGSKDG 683 SY+EA KE K+W+ A EEMDSL+KN TW LVDKP ++++ C+W++KLK GS Sbjct: 847 QSYQEATSDKEWKKWKLATHEEMDSLIKNGTWVLVDKPQNRKIIGCRWLFKLKS-GSPGV 905 Query: 684 KP-RFKARLMARGFTQQAGIDFNEVFSPVVKHTSIRVLLALVTQFDMELEQMDVKTTFLH 860 +P R+KA+L+A+G+T + G+D+ E+F+ VVKHTSIR+L+++V D+ELEQMDVKT FLH Sbjct: 906 EPVRYKAQLVAKGYTHREGVDYQEIFALVVKHTSIRILMSVVVDQDLELEQMDVKTAFLH 965 Query: 861 GNLDEKIFMSQPKGFV 908 G L+E+++M QP+G + Sbjct: 966 GELEEELYMEQPEGCI 981 >dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsis thaliana] Length = 1342 Score = 251 bits (641), Expect = 3e-64 Identities = 143/316 (45%), Positives = 191/316 (60%), Gaps = 15/316 (4%) Frame = +3 Query: 3 GIPPSYDNLRICGCVAYAHTKEGKLEPRARKCMFVSYPEGVKGYKLWCQNKHISKCFISR 182 G PP Y L+ G VAY H+ +GKL PRA+K +F+ YP+GVK +K+W KC +SR Sbjct: 644 GHPPDYKILKKFGSVAYIHSDQGKLNPRAKKGIFLGYPDGVKRFKVWLLEDR--KCVVSR 701 Query: 183 DVVFKVDEYY--LKENGESSTSASSDHDACAGIEVE-LADRTENQ*D----------YRL 323 D+VF+ ++ Y L++N S IE++ L+ ENQ + Sbjct: 702 DIVFQENQMYKELQKNDMSEEDKQLTEVERTLIELKNLSADDENQSEGGDNSNQEQASTT 761 Query: 324 XXXXXXXXXXXXXXXXXALADYQLARDRTRRTRVAPTRYGYAD--LISFALLTAETLEKN 497 L +Y LARDR RR AP R+ D L+ FAL E E Sbjct: 762 RSASKDKQVEETDSDDDCLENYLLARDRIRRQIRAPQRFVEEDDSLVGFALTMTEDGEVY 821 Query: 498 ELASYEEACKCKERKEWRQAMQEEMDSLLKNKTWELVDKPVGQRLVSCKWIYKLKEDGSK 677 E +YEEA + E ++W+QA EEMDS+ KN TW+++DKP G+R++ CKWI+K K Sbjct: 822 EPETYEEAMRSPECEKWKQATIEEMDSMKKNDTWDVIDKPEGKRVIGCKWIFKRKAGIPG 881 Query: 678 DGKPRFKARLMARGFTQQAGIDFNEVFSPVVKHTSIRVLLALVTQFDMELEQMDVKTTFL 857 PR+KARL+A+GF+Q+ GID+ E+FSPVVKH SIR LL++V QFDMELEQ+DVKT FL Sbjct: 882 VEPPRYKARLVAKGFSQREGIDYQEIFSPVVKHVSIRYLLSIVVQFDMELEQLDVKTAFL 941 Query: 858 HGNLDEKIFMSQPKGF 905 HGNLDE I MSQP+G+ Sbjct: 942 HGNLDEYILMSQPEGY 957 >pir||S23319 hypothetical protein 2 - Arabidopsis thaliana retrotransposon Ta1-2 (strain Landsberg) (fragment) gi|16384|emb|CAA37924.1| unnamed protein product [Arabidopsis thaliana] Length = 1084 Score = 247 bits (631), Expect = 4e-63 Identities = 130/315 (41%), Positives = 187/315 (59%), Gaps = 16/315 (5%) Frame = +3 Query: 12 PSYDNLRICGCVAYAHTKEGKLEPRARKCMFVSYPEGVKGYKLWCQNKHISKCFISRDVV 191 P Y +LR G +AY H +GKL+PRA K +F+ YP G KGYK+W + KC ISR+V+ Sbjct: 569 PGYKHLRRFGSIAYVHIDQGKLKPRALKGIFIGYPSGTKGYKIWLLEEQ--KCVISRNVL 626 Query: 192 FKVDEYYL----KENGESSTSASSDHDACAGIE------------VELADRTENQ*DYRL 323 F + Y KE S + + H I+ ++++D E+ Sbjct: 627 FHEELVYKDTIEKERVVESEAEPASHSKSTLIKMKTPGNLNSGGVIQVSDEEESDESVDE 686 Query: 324 XXXXXXXXXXXXXXXXXALADYQLARDRTRRTRVAPTRYGYADLISFALLTAETLEKNEL 503 +LA+YQL RDR RR P R+ ++FAL+T ETL E Sbjct: 687 EQEPEPQVELPETQTTSSLANYQLVRDRERRQIHPPARFTEESGVAFALVTVETLSMEEP 746 Query: 504 ASYEEACKCKERKEWRQAMQEEMDSLLKNKTWELVDKPVGQRLVSCKWIYKLKEDGSKDG 683 SY+EA KE K+W+ A EE +SL+KN TW LVDKP ++++ C+W++K+K Sbjct: 747 QSYQEATSDKEWKKWKLATHEEKNSLIKNGTWVLVDKPKDRKIIGCRWLFKMKSGIPGVE 806 Query: 684 KPRFKARLMARGFTQQAGIDFNEVFSPVVKHTSIRVLLALVTQFDMELEQMDVKTTFLHG 863 R+KARL+A+G+TQ+ G+D+ E+F+PV KHTSIR+L+++V D+ELEQMDVKTTFLHG Sbjct: 807 PVRYKARLVAKGYTQREGVDYQEIFAPVAKHTSIRILMSVVVDQDLELEQMDVKTTFLHG 866 Query: 864 NLDEKIFMSQPKGFV 908 L+E+++M QP GF+ Sbjct: 867 ELEEELYMEQPDGFI 881 >emb|CAA20201.1| putative transposable element [Arabidopsis thaliana] gi|7268932|emb|CAB79135.1| putative transposable element [Arabidopsis thaliana] Length = 1308 Score = 246 bits (628), Expect = 9e-63 Identities = 135/316 (42%), Positives = 188/316 (59%), Gaps = 18/316 (5%) Frame = +3 Query: 12 PSYDNLRICGCVAYAHTKEGKLEPRARKCMFVSYPEGVKGYKLWCQNKHISKCFISRDVV 191 P Y +LR GC+AY H +GKL+PRA K +F+ YP+G KGYK+W ++ KC ISR++V Sbjct: 650 PGYKHLRRFGCIAYVHLDQGKLKPRALKGVFLGYPQGTKGYKVWLLDEE--KCVISRNIV 707 Query: 192 FKVDEYY--LKENGESSTSASSD-------------HDACA---GIEVELADRTENQ*DY 317 F ++ Y ++E+ E S SD H C+ G+ +E D+ + Sbjct: 708 FNENQVYKDIRESSEQSVKDISDLEGYNEFQVSVKEHGECSKTGGVTIEEIDQESDS--- 764 Query: 318 RLXXXXXXXXXXXXXXXXXALADYQLARDRTRRTRVAPTRYGYADLISFALLTAETLEKN 497 L++YQ ARDR RR P + + AL+ AE +E Sbjct: 765 ------ENSVTQEPLIASIDLSNYQSARDRERRAPNPPQKLADYTHFALALVMAEEIESE 818 Query: 498 ELASYEEACKCKERKEWRQAMQEEMDSLLKNKTWELVDKPVGQRLVSCKWIYKLKEDGSK 677 E Y +A K K +W M+EE+DSLLKN TW++V+ P Q+++SC+W++KLK Sbjct: 819 EPQCYHDAKKDKHWIKWNGGMKEEIDSLLKNGTWDIVEWPKEQKVISCRWLFKLKPGIPG 878 Query: 678 DGKPRFKARLMARGFTQQAGIDFNEVFSPVVKHTSIRVLLALVTQFDMELEQMDVKTTFL 857 R+KARL+ARGFTQQ GID+ EVF+PVVKH SIR+L++ V + DMELEQMDVKTTFL Sbjct: 879 VEAQRYKARLVARGFTQQKGIDYEEVFAPVVKHISIRILMSAVVKDDMELEQMDVKTTFL 938 Query: 858 HGNLDEKIFMSQPKGF 905 HG LD+ ++M QP+GF Sbjct: 939 HGELDQVLYMEQPEGF 954 >gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa Japonica Group] gi|77548751|gb|ABA91548.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 2340 Score = 245 bits (625), Expect = 2e-62 Identities = 136/307 (44%), Positives = 181/307 (58%), Gaps = 2/307 (0%) Frame = +3 Query: 3 GIPPSYDNLRICGCVAYAHTKEGKLEPRARKCMFVSYPEGVKGYKLWCQNKHISKCFISR 182 G P +Y +LR+ GC AYAH GKLEPRA KC+F+ YP GVKGYKLWC K ISR Sbjct: 858 GSPANYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWCPET--KKVVISR 915 Query: 183 DVVFKVDEYYLKENGESSTSASSDHDACAGIEVELADRTENQ*DYRLXXXXXXXXXXXXX 362 +VVF + L + ++ S A +E ++ + + Sbjct: 916 NVVFH-ESVMLHDKPSTNVPVESQEKASVQVEHLISSGHAPEKEDVAINQDEPVIEDSNS 974 Query: 363 XXXXALADYQLARDRTRRTRVAPTRY-GYADLISFALLTAETLEKN-ELASYEEACKCKE 536 +A+DR +R P RY A+++++AL AE +E N E ++Y EA + Sbjct: 975 SIVQQSPKRSIAKDRPKRNIKPPQRYIEEANIVAYALSVAEEIEGNAEPSTYSEAIVSDD 1034 Query: 537 RKEWRQAMQEEMDSLLKNKTWELVDKPVGQRLVSCKWIYKLKEDGSKDGKPRFKARLMAR 716 W AM +EM+SL KN TWELV P ++ + CKWI+K KE S + R+KARL+A+ Sbjct: 1035 CNRWITAMHDEMESLEKNHTWELVKLPKEKKPIRCKWIFKRKEGISSSDEARYKARLIAK 1094 Query: 717 GFTQQAGIDFNEVFSPVVKHTSIRVLLALVTQFDMELEQMDVKTTFLHGNLDEKIFMSQP 896 G++Q GIDFN+VFSPVVKH+SIR LL++V D ELEQMDVKT FLHG L+E I+M QP Sbjct: 1095 GYSQIPGIDFNDVFSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQP 1154 Query: 897 KGFVKHG 917 KGFV G Sbjct: 1155 KGFVVPG 1161 >gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group] gi|53370655|gb|AAU89150.1| integrase core domain containing protein [Oryza sativa Japonica Group] gi|108710286|gb|ABF98081.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1322 Score = 245 bits (625), Expect = 2e-62 Identities = 137/310 (44%), Positives = 185/310 (59%), Gaps = 5/310 (1%) Frame = +3 Query: 3 GIPPSYDNLRICGCVAYAHTKEGKLEPRARKCMFVSYPEGVKGYKLWCQNKHISKCFISR 182 G+P Y LR+ GC AYAH GKLEPRA KC+F+ Y GVKGYKLW N +K F+SR Sbjct: 644 GMPADYSQLRVFGCTAYAHVDNGKLEPRAIKCLFLGYGSGVKGYKLW--NPETNKTFMSR 701 Query: 183 DVVFKVDEYYLKENG---ESSTSASSDHDACAGIEVELADRTENQ*DYRLXXXXXXXXXX 353 +V+F +E+ + + + S + ++VE D E + Sbjct: 702 NVIF--NEFVMFNDSLPTDVIPGGSDEEQQYVSVQVEHVDDQETE-----IVGNDVNDTV 754 Query: 354 XXXXXXXALADYQLARDRTRRTRVAPTRY-GYADLISFALLTAETLEKN-ELASYEEACK 527 D +A RT+R+ AP R D++ +A AE +E E A+Y EA Sbjct: 755 QHSPSVLQPQDEPIAHRRTKRSCGAPVRLIEECDMVYYAFSYAEQVENTLEPATYTEAVV 814 Query: 528 CKERKEWRQAMQEEMDSLLKNKTWELVDKPVGQRLVSCKWIYKLKEDGSKDGKPRFKARL 707 +R++W A+QEEM SL KN TWELV P ++ V CKWI+K KE S PRFK RL Sbjct: 815 SGDREKWISAIQEEMQSLEKNGTWELVHLPKQKKPVRCKWIFKRKEGLSPSEPPRFKVRL 874 Query: 708 MARGFTQQAGIDFNEVFSPVVKHTSIRVLLALVTQFDMELEQMDVKTTFLHGNLDEKIFM 887 +A+GF+Q AG+D+N+VFSPVVKH+SIR ++VT D+ELEQ+DVKTTFLHG L+E+I+M Sbjct: 875 VAKGFSQIAGVDYNDVFSPVVKHSSIRTFFSIVTMHDLELEQLDVKTTFLHGELEEEIYM 934 Query: 888 SQPKGFVKHG 917 QP+GF+ G Sbjct: 935 DQPEGFIVPG 944 >gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Arabidopsis thaliana] Length = 1356 Score = 242 bits (618), Expect = 1e-61 Identities = 131/318 (41%), Positives = 189/318 (59%), Gaps = 19/318 (5%) Frame = +3 Query: 12 PSYDNLRICGCVAYAHTKEGKLEPRARKCMFVSYPEGVKGYKLWCQNKHISKCFISRDVV 191 P Y +LR G +AY H +GKL+PRA K F+ YP G KGYK+W + KC ISR+VV Sbjct: 659 PGYKHLRKFGSIAYVHQDQGKLKPRALKGFFLGYPAGTKGYKVWLLEEE--KCVISRNVV 716 Query: 192 FKVDEYY----LKE------NGESSTSASSDHDACAG---------IEVELADRTENQ*D 314 F+ Y +KE N + +TS+ + + A ++ + TE + Sbjct: 717 FQESVVYRDLKVKEDDTDNLNQKETTSSEVEQNKFAEASGSGGVIQLQSDSEPITEGEQS 776 Query: 315 YRLXXXXXXXXXXXXXXXXXALADYQLARDRTRRTRVAPTRYGYADLISFALLTAETLEK 494 L Y+LARDR RR PTR+ ++FAL+ E Sbjct: 777 SDSEEEVEYSEKTQETPKRTGLTTYKLARDRVRRNINPPTRFTEESSVTFALVVVENCIV 836 Query: 495 NELASYEEACKCKERKEWRQAMQEEMDSLLKNKTWELVDKPVGQRLVSCKWIYKLKEDGS 674 E SY+EA + ++ ++W A +EMDSL+KN TW+LVDKP ++++ C+W++KLK Sbjct: 837 QEPQSYQEAMESQDCEKWDMATHDEMDSLMKNGTWDLVDKPKDRKIIGCRWLFKLKSGIP 896 Query: 675 KDGKPRFKARLMARGFTQQAGIDFNEVFSPVVKHTSIRVLLALVTQFDMELEQMDVKTTF 854 RFKARL+A+G+TQ+ G+D+ E+F+PVVKH SIR+L++LV D+ELEQMDVKTTF Sbjct: 897 GVEPTRFKARLVAKGYTQREGVDYQEIFAPVVKHVSIRILMSLVVDKDLELEQMDVKTTF 956 Query: 855 LHGNLDEKIFMSQPKGFV 908 LHG+L+E+++M QP+GFV Sbjct: 957 LHGDLEEELYMEQPEGFV 974 >gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1| copia LTR rider [Solanum lycopersicum] Length = 1307 Score = 241 bits (615), Expect = 3e-61 Identities = 129/304 (42%), Positives = 192/304 (63%), Gaps = 3/304 (0%) Frame = +3 Query: 3 GIPPSYDNLRICGCVAYAHTKEGKLEPRARKCMFVSYPEGVKGYKLWCQNKHISKCFISR 182 G Y NL+ GC AY H EGKLEPRA+K +FV Y +GVKG+++W + + +SR Sbjct: 629 GKAADYSNLKAFGCTAYYHVSEGKLEPRAKKGVFVGYGDGVKGFRIWSPAE--KRVIMSR 686 Query: 183 DVVFKVDEYYLKENGESSTSASSDHDACAGIEVELADRTENQ*DYRLXXXXXXXXXXXXX 362 +VVF DE L T+ S +E ++ +N+ D + Sbjct: 687 NVVF--DESPLLRTIVKPTTTSETGSLDKQVEFQVI---QNESDLKEPEEEDQEPQTETD 741 Query: 363 XXXXALADYQ--LARDRTRRTRVAP-TRYGYADLISFALLTAETLEKNELASYEEACKCK 533 +D +A+DR RR V P TRYG+ D++ +AL AE ++ +E ++Y+EA Sbjct: 742 IPESMPSDIHQSIAQDRPRRVGVRPPTRYGFEDMVGYALQVAEEVDTSEPSTYKEAILSS 801 Query: 534 ERKEWRQAMQEEMDSLLKNKTWELVDKPVGQRLVSCKWIYKLKEDGSKDGKPRFKARLMA 713 + ++W AM +EM+SL KN+TW+LV +P G+++++CKW++K KE S ++KAR++A Sbjct: 802 DSEKWFAAMGDEMESLHKNQTWDLVIQPSGRKIITCKWVFKKKEGISPAEGVKYKARVVA 861 Query: 714 RGFTQQAGIDFNEVFSPVVKHTSIRVLLALVTQFDMELEQMDVKTTFLHGNLDEKIFMSQ 893 RGF Q+ G+D+NE+FSPVV+HTSIRVLLA+V ++ELEQ+DVKT FLHG L+E+I+M+Q Sbjct: 862 RGFNQREGVDYNEIFSPVVRHTSIRVLLAIVAHQNLELEQLDVKTAFLHGELEEEIYMTQ 921 Query: 894 PKGF 905 P GF Sbjct: 922 PDGF 925 >gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group] Length = 1280 Score = 240 bits (612), Expect = 7e-61 Identities = 131/307 (42%), Positives = 180/307 (58%), Gaps = 2/307 (0%) Frame = +3 Query: 3 GIPPSYDNLRICGCVAYAHTKEGKLEPRARKCMFVSYPEGVKGYKLWCQNKHISKCFISR 182 G P +Y +LR+ GC AYAH GKLEPRA KC+F+ YP GVKGYKLWC K ISR Sbjct: 686 GSPANYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWCPET--KKVVISR 743 Query: 183 DVVFKVDEYYLKENGESSTSASSDHDACAGIEVELADRTENQ*DYRLXXXXXXXXXXXXX 362 +VVF + L + ++ S A +E ++ + + Sbjct: 744 NVVFH-ESVILHDKPSTNVPVESQEKASVQVEHLISSGHAPEKENVAINQDAPVIEDSDS 802 Query: 363 XXXXALADYQLARDRTRRTRVAPTRY-GYADLISFALLTAETLEKN-ELASYEEACKCKE 536 + +A+D+ +R P RY A+++++AL AE +E N E ++Y EA + Sbjct: 803 SIVQQSSKRSIAKDKPKRNIKPPRRYIEEANIVAYALSVAEEIEGNAEPSTYSEAIVSDD 862 Query: 537 RKEWRQAMQEEMDSLLKNKTWELVDKPVGQRLVSCKWIYKLKEDGSKDGKPRFKARLMAR 716 W AM +EM+SL KN TWE V P ++ + CKWI+K KE S + R+KARL+A+ Sbjct: 863 CNRWITAMHDEMESLKKNHTWEFVKLPKEKKPIRCKWIFKRKEGMSPSDEARYKARLVAK 922 Query: 717 GFTQQAGIDFNEVFSPVVKHTSIRVLLALVTQFDMELEQMDVKTTFLHGNLDEKIFMSQP 896 G++Q GIDFN+VFSP++KH+SIR LL +V D ELEQMDVKT FLHG L+E I+M QP Sbjct: 923 GYSQIPGIDFNDVFSPIMKHSSIRTLLGIVAMHDYELEQMDVKTAFLHGELEEDIYMEQP 982 Query: 897 KGFVKHG 917 +GFV G Sbjct: 983 EGFVVLG 989 >gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1312 Score = 240 bits (612), Expect = 7e-61 Identities = 131/307 (42%), Positives = 180/307 (58%), Gaps = 2/307 (0%) Frame = +3 Query: 3 GIPPSYDNLRICGCVAYAHTKEGKLEPRARKCMFVSYPEGVKGYKLWCQNKHISKCFISR 182 G P +Y +LR+ GC AYAH GKLEPRA KC+F+ YP GVKGYKLWC K ISR Sbjct: 686 GSPANYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWCPET--KKVVISR 743 Query: 183 DVVFKVDEYYLKENGESSTSASSDHDACAGIEVELADRTENQ*DYRLXXXXXXXXXXXXX 362 +VVF + L + ++ S A +E ++ + + Sbjct: 744 NVVFH-ESVILHDKPSTNVPVESQEKASVQVEHLISSGHAPEKENVAINQDAPVIEDSDS 802 Query: 363 XXXXALADYQLARDRTRRTRVAPTRY-GYADLISFALLTAETLEKN-ELASYEEACKCKE 536 + +A+D+ +R P RY A+++++AL AE +E N E ++Y EA + Sbjct: 803 SIVQQSSKRSIAKDKPKRNIKPPRRYIEEANIVAYALSVAEEIEGNAEPSTYSEAIVSDD 862 Query: 537 RKEWRQAMQEEMDSLLKNKTWELVDKPVGQRLVSCKWIYKLKEDGSKDGKPRFKARLMAR 716 W AM +EM+SL KN TWE V P ++ + CKWI+K KE S + R+KARL+A+ Sbjct: 863 CNRWITAMHDEMESLKKNHTWEFVKLPKEKKPIRCKWIFKRKEGMSPSDEARYKARLVAK 922 Query: 717 GFTQQAGIDFNEVFSPVVKHTSIRVLLALVTQFDMELEQMDVKTTFLHGNLDEKIFMSQP 896 G++Q GIDFN+VFSP++KH+SIR LL +V D ELEQMDVKT FLHG L+E I+M QP Sbjct: 923 GYSQIPGIDFNDVFSPIMKHSSIRTLLGIVAMHDYELEQMDVKTAFLHGELEEDIYMEQP 982 Query: 897 KGFVKHG 917 +GFV G Sbjct: 983 EGFVVLG 989 >gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1278 Score = 239 bits (609), Expect = 1e-60 Identities = 136/308 (44%), Positives = 177/308 (57%), Gaps = 3/308 (0%) Frame = +3 Query: 3 GIPPSYDNLRICGCVAYAHTKEGKLEPRARKCMFVSYPEGVKGYKLWCQNKHISKCFISR 182 G+P Y LR+ GC AYAH KLEPRA KC+F+ Y GVKGYKLW N +K F+SR Sbjct: 644 GMPADYSQLRVFGCTAYAHVDNEKLEPRAIKCLFLGYGLGVKGYKLW--NPETNKTFMSR 701 Query: 183 DVVFKVDEYYLKENGESSTSASSDHDA-CAGIEVELADRTENQ*DYRLXXXXXXXXXXXX 359 VVF + SD + ++VE D E + Sbjct: 702 SVVFNESVMFNDSLPTDVIPGGSDEEQQYVSVQVEHVDDQETE-----IVGNDVNDTVQH 756 Query: 360 XXXXXALADYQLARDRTRRTRVAPTRY-GYADLISFALLTAETLEKN-ELASYEEACKCK 533 D +A RT+R+ AP R D++ +A AE +E E A+Y EA Sbjct: 757 SPPVLQPQDEPIAHRRTKRSCGAPVRLIEECDMVYYAFSCAEQVENTLEPATYTEAVVSG 816 Query: 534 ERKEWRQAMQEEMDSLLKNKTWELVDKPVGQRLVSCKWIYKLKEDGSKDGKPRFKARLMA 713 +R++W AMQEEM SL KN TWELV P ++ V CKWI+K KE S PRFKARL+A Sbjct: 817 DREKWISAMQEEMQSLEKNGTWELVHLPKQKKPVRCKWIFKRKEGLSPSEPPRFKARLVA 876 Query: 714 RGFTQQAGIDFNEVFSPVVKHTSIRVLLALVTQFDMELEQMDVKTTFLHGNLDEKIFMSQ 893 +GF+Q G+D+N+VFSPVVKH+SIR ++V D+ELEQ+DVKT FLHG L+E+I+M Q Sbjct: 877 KGFSQIVGVDYNDVFSPVVKHSSIRTFFSIVAMHDLELEQLDVKTAFLHGELEEEIYMDQ 936 Query: 894 PKGFVKHG 917 P+GF+ G Sbjct: 937 PEGFIVPG 944 >emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group] Length = 1335 Score = 239 bits (609), Expect = 1e-60 Identities = 133/316 (42%), Positives = 184/316 (58%), Gaps = 11/316 (3%) Frame = +3 Query: 3 GIPPSYDNLRICGCVAYAHTKEGKLEPRARKCMFVSYPEGVKGYKLWCQNKHISKCFISR 182 G P Y L++ GC AYAH GKLEPRA KC+F+ Y GVKGYKLW N K F+SR Sbjct: 645 GTPADYSQLKVFGCTAYAHVDNGKLEPRAVKCLFLGYGSGVKGYKLW--NPETGKTFMSR 702 Query: 183 DVVFK--------VDEYYLKENGESSTSASSDH-DACAGIEVELADRTENQ*DYRLXXXX 335 VVF + ++ E +H D G++VE D ++ + + Sbjct: 703 SVVFNESVMFTNSLPSEHVPEKELQRMHMQVEHVDDDTGVQVEPVDEQDDH-NNDVADDD 761 Query: 336 XXXXXXXXXXXXXALADYQLARDRTRRTRVAPTRY-GYADLISFALLTAETLEK-NELAS 509 D +A+ +++RT P R +L +AL AE +E +E A+ Sbjct: 762 AHDDVQQTPPILQLEEDLSIAQRKSKRTTKPPKRLIEECNLSYYALSCAEQVENVHEPAT 821 Query: 510 YEEACKCKERKEWRQAMQEEMDSLLKNKTWELVDKPVGQRLVSCKWIYKLKEDGSKDGKP 689 Y+EA +C + + W AM EEM SL KN TWE+V P ++ +SCKWI+K KE S P Sbjct: 822 YKEAVRCGDSENWISAMHEEMQSLEKNSTWEVVPLPKKKKTISCKWIFKRKEALSLSEPP 881 Query: 690 RFKARLMARGFTQQAGIDFNEVFSPVVKHTSIRVLLALVTQFDMELEQMDVKTTFLHGNL 869 ++KARL+ARG++Q G+D+N+VFSPVVKH+SIR L++V D+ELEQ+DVKT FLHG L Sbjct: 882 KYKARLVARGYSQIPGVDYNDVFSPVVKHSSIRTFLSIVASHDLELEQLDVKTAFLHGEL 941 Query: 870 DEKIFMSQPKGFVKHG 917 +E I+M QP+GF+ G Sbjct: 942 EEDIYMDQPEGFIVPG 957