BLASTX nr result
ID: Akebia26_contig00024929
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia26_contig00024929
(261 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_005651417.1| chlorophyll a/b-binding protein [Coccomyxa s... 100 4e-19
ref|XP_005651359.1| major light-harvesting complex II protein m1... 95 1e-17
ref|XP_005650981.1| chlorophyll a/b-binding protein [Coccomyxa s... 92 8e-17
gb|AAB70556.1| chlorophyll a/b binding protein [Tetraselmis sp. ... 92 1e-16
ref|XP_005644537.1| chlorophyll a/b-binding protein [Coccomyxa s... 91 2e-16
ref|XP_005845510.1| hypothetical protein CHLNCDRAFT_137219 [Chlo... 87 2e-15
ref|XP_005843949.1| hypothetical protein CHLNCDRAFT_59790 [Chlor... 86 5e-15
tpg|DAA05914.1| TPA_inf: chloroplast light-harvesting complex II... 85 9e-15
sp|P14273.1|CB2_CHLRE RecName: Full=Chlorophyll a-b binding prot... 82 8e-14
ref|XP_001695353.1| chloropyll a-b binding protein of LHCII type... 82 8e-14
gb|ABD37899.1| light-harvesting chlorophyll-a/b binding protein ... 81 2e-13
sp|P27517.1|CB2_DUNTE RecName: Full=Chlorophyll a-b binding prot... 80 2e-13
gb|ABD91646.1| major light-harvesting chlorophyll a/b protein 2.... 80 2e-13
gb|ABD91647.1| major light-harvesting chlorophyll a/b protein 2.... 80 2e-13
gb|AAC79711.1| chlorophyll a/b binding protein [Acetabularia ace... 80 3e-13
ref|XP_002952704.1| light-harvesting chlorophyll a/b-binding pro... 79 7e-13
ref|XP_001693987.1| light-harvesting protein of photosystem II [... 78 1e-12
tpg|DAA05906.1| TPA_inf: chloroplast light-harvesting complex II... 78 1e-12
dbj|BAA78595.1| hypothetical protein [Chlamydomonas sp. HS-5] 78 1e-12
ref|XP_002949075.1| hypothetical protein VOLCADRAFT_80470 [Volvo... 78 1e-12
>ref|XP_005651417.1| chlorophyll a/b-binding protein [Coccomyxa subellipsoidea C-169]
gi|384253398|gb|EIE26873.1| chlorophyll a/b-binding
protein [Coccomyxa subellipsoidea C-169]
Length = 250
Score = 99.8 bits (247), Expect = 4e-19
Identities = 47/69 (68%), Positives = 54/69 (78%)
Frame = +3
Query: 54 MASALAQRSFLGSTLRPVAPTQGKGTKQVTRAAVEFYGPERAKWLGPFSDNATPDYLTGE 233
MASAL SF G++LR PT GKG +QVTRAA+EFYGP+RA +LGPF+D TP YL GE
Sbjct: 1 MASALLCNSFAGASLRSAVPTAGKGNRQVTRAAIEFYGPDRATFLGPFTD--TPSYLNGE 58
Query: 234 FAGDYGWDT 260
F GDYGWDT
Sbjct: 59 FPGDYGWDT 67
>ref|XP_005651359.1| major light-harvesting complex II protein m10 [Coccomyxa
subellipsoidea C-169] gi|384253340|gb|EIE26815.1| major
light-harvesting complex II protein m10 [Coccomyxa
subellipsoidea C-169]
Length = 250
Score = 94.7 bits (234), Expect = 1e-17
Identities = 43/69 (62%), Positives = 53/69 (76%)
Frame = +3
Query: 54 MASALAQRSFLGSTLRPVAPTQGKGTKQVTRAAVEFYGPERAKWLGPFSDNATPDYLTGE 233
MAS + ++FLG++L PT GKGTKQVTRAA+EFYGP RA +LGPF+ +P YL GE
Sbjct: 1 MASTMMAKTFLGASLAKAVPTSGKGTKQVTRAAIEFYGPNRAGYLGPFT--KSPSYLNGE 58
Query: 234 FAGDYGWDT 260
+ GDYGWDT
Sbjct: 59 YPGDYGWDT 67
>ref|XP_005650981.1| chlorophyll a/b-binding protein [Coccomyxa subellipsoidea C-169]
gi|384252962|gb|EIE26437.1| chlorophyll a/b-binding
protein [Coccomyxa subellipsoidea C-169]
Length = 245
Score = 92.0 bits (227), Expect = 8e-17
Identities = 41/62 (66%), Positives = 52/62 (83%)
Frame = +3
Query: 75 RSFLGSTLRPVAPTQGKGTKQVTRAAVEFYGPERAKWLGPFSDNATPDYLTGEFAGDYGW 254
+SFLG++LR PT+G+G KQVTRAA+EFYGP+RA +LGPF++ +P YL GEF GDYGW
Sbjct: 3 QSFLGASLRSAVPTKGQGNKQVTRAAIEFYGPDRAGFLGPFTE--SPSYLKGEFPGDYGW 60
Query: 255 DT 260
DT
Sbjct: 61 DT 62
>gb|AAB70556.1| chlorophyll a/b binding protein [Tetraselmis sp. RG-15]
Length = 251
Score = 91.7 bits (226), Expect = 1e-16
Identities = 45/67 (67%), Positives = 52/67 (77%)
Frame = +3
Query: 60 SALAQRSFLGSTLRPVAPTQGKGTKQVTRAAVEFYGPERAKWLGPFSDNATPDYLTGEFA 239
+A+A RSF + V + +G KQVTRAAVEFYGP+RAKWLGPFSD+ TP YLTGEF
Sbjct: 2 AAVAARSFAATVAGQVGAS-ARGQKQVTRAAVEFYGPDRAKWLGPFSDD-TPSYLTGEFP 59
Query: 240 GDYGWDT 260
GDYGWDT
Sbjct: 60 GDYGWDT 66
>ref|XP_005644537.1| chlorophyll a/b-binding protein [Coccomyxa subellipsoidea C-169]
gi|384246503|gb|EIE19993.1| chlorophyll a/b-binding
protein [Coccomyxa subellipsoidea C-169]
Length = 254
Score = 90.5 bits (223), Expect = 2e-16
Identities = 43/69 (62%), Positives = 53/69 (76%)
Frame = +3
Query: 54 MASALAQRSFLGSTLRPVAPTQGKGTKQVTRAAVEFYGPERAKWLGPFSDNATPDYLTGE 233
MASAL SF+ S R V+ + KG KQVTRA++E+YGP+R K+LGP+SD ATP YL GE
Sbjct: 1 MASALLSNSFVVSARRTVSSPKSKG-KQVTRASIEWYGPDRPKFLGPYSDGATPSYLKGE 59
Query: 234 FAGDYGWDT 260
+ GDYGWDT
Sbjct: 60 YPGDYGWDT 68
>ref|XP_005845510.1| hypothetical protein CHLNCDRAFT_137219 [Chlorella variabilis]
gi|307105157|gb|EFN53408.1| hypothetical protein
CHLNCDRAFT_137219 [Chlorella variabilis]
Length = 258
Score = 87.0 bits (214), Expect = 2e-15
Identities = 44/70 (62%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
Frame = +3
Query: 54 MASALA-QRSFLGSTLRPVAPTQGKGTKQVTRAAVEFYGPERAKWLGPFSDNATPDYLTG 230
MAS +A R+F G T R + K KQVTRA+VEFYGP+RAK+LGPFS+ A P YL G
Sbjct: 1 MASVVAASRAFTGITARQ-STKSAKARKQVTRASVEFYGPDRAKFLGPFSEGAVPSYLKG 59
Query: 231 EFAGDYGWDT 260
EF GDYGWDT
Sbjct: 60 EFPGDYGWDT 69
>ref|XP_005843949.1| hypothetical protein CHLNCDRAFT_59790 [Chlorella variabilis]
gi|307103588|gb|EFN51847.1| hypothetical protein
CHLNCDRAFT_59790 [Chlorella variabilis]
Length = 251
Score = 85.9 bits (211), Expect = 5e-15
Identities = 41/69 (59%), Positives = 50/69 (72%)
Frame = +3
Query: 54 MASALAQRSFLGSTLRPVAPTQGKGTKQVTRAAVEFYGPERAKWLGPFSDNATPDYLTGE 233
M + A R+ G + RP +G++QVTRA+VEFYGP+RAKWLGPFSD A P YL GE
Sbjct: 1 MQATAATRATFGLS-RPAV----RGSRQVTRASVEFYGPDRAKWLGPFSDGAVPSYLKGE 55
Query: 234 FAGDYGWDT 260
F GDYGWD+
Sbjct: 56 FPGDYGWDS 64
>tpg|DAA05914.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm2 [Acetabularia acetabulum]
Length = 248
Score = 85.1 bits (209), Expect = 9e-15
Identities = 40/64 (62%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Frame = +3
Query: 72 QRSFLGSTLRPVAPTQGKGTKQVT-RAAVEFYGPERAKWLGPFSDNATPDYLTGEFAGDY 248
Q S +G+T + P KG K+V+ +AAVE+YGP+RAKWLGP+SD A P YLTGEF GDY
Sbjct: 3 QTSLVGTTTKSTLP---KGNKRVSVQAAVEWYGPDRAKWLGPYSDGAVPSYLTGEFPGDY 59
Query: 249 GWDT 260
GWDT
Sbjct: 60 GWDT 63
>sp|P14273.1|CB2_CHLRE RecName: Full=Chlorophyll a-b binding protein of LHCII type I,
chloroplastic; Short=CAB; Short=LHCP; Flags: Precursor
gi|20269802|gb|AAM18056.1|AF495472_1 major
light-harvesting complex II protein m6 [Chlamydomonas
reinhardtii] gi|167409|gb|AAA33082.1| chlorophyll
a/b-binding protein [Chlamydomonas reinhardtii]
Length = 253
Score = 82.0 bits (201), Expect = 8e-14
Identities = 39/69 (56%), Positives = 43/69 (62%)
Frame = +3
Query: 54 MASALAQRSFLGSTLRPVAPTQGKGTKQVTRAAVEFYGPERAKWLGPFSDNATPDYLTGE 233
MA ALA R L T + + VEFYGP RAKWLGP+S+NATP YLTGE
Sbjct: 1 MAFALASRKALQVTCKATGKKTAAKAAAPKSSGVEFYGPNRAKWLGPYSENATPAYLTGE 60
Query: 234 FAGDYGWDT 260
F GDYGWDT
Sbjct: 61 FPGDYGWDT 69
>ref|XP_001695353.1| chloropyll a-b binding protein of LHCII type I, chloroplast
precursor [Chlamydomonas reinhardtii]
gi|158275836|gb|EDP01611.1| chloropyll a-b binding
protein of LHCII type I, chloroplast precursor
[Chlamydomonas reinhardtii]
Length = 253
Score = 82.0 bits (201), Expect = 8e-14
Identities = 39/69 (56%), Positives = 43/69 (62%)
Frame = +3
Query: 54 MASALAQRSFLGSTLRPVAPTQGKGTKQVTRAAVEFYGPERAKWLGPFSDNATPDYLTGE 233
MA ALA R L T + + VEFYGP RAKWLGP+S+NATP YLTGE
Sbjct: 1 MAFALASRKALQVTCKATGKKTAAKAAAPKSSGVEFYGPNRAKWLGPYSENATPAYLTGE 60
Query: 234 FAGDYGWDT 260
F GDYGWDT
Sbjct: 61 FPGDYGWDT 69
>gb|ABD37899.1| light-harvesting chlorophyll-a/b binding protein LhcbM2
[Acutodesmus obliquus]
Length = 249
Score = 80.9 bits (198), Expect = 2e-13
Identities = 34/46 (73%), Positives = 41/46 (89%)
Frame = +3
Query: 123 KGTKQVTRAAVEFYGPERAKWLGPFSDNATPDYLTGEFAGDYGWDT 260
+ T+QVTRAA+E+YGP+R K+LGPFS+ TP YLTGEFAGDYGWDT
Sbjct: 17 RATRQVTRAAIEWYGPDRPKFLGPFSEGDTPAYLTGEFAGDYGWDT 62
>sp|P27517.1|CB2_DUNTE RecName: Full=Chlorophyll a-b binding protein of LHCII type I,
chloroplastic; Short=CAB; Short=LHCP; Flags: Precursor
gi|167985|gb|AAA62772.1| 28.5 kDa LHCII apoprotein
[Dunaliella tertiolecta]
Length = 253
Score = 80.5 bits (197), Expect = 2e-13
Identities = 39/69 (56%), Positives = 49/69 (71%)
Frame = +3
Query: 54 MASALAQRSFLGSTLRPVAPTQGKGTKQVTRAAVEFYGPERAKWLGPFSDNATPDYLTGE 233
MA+ +A+ +R T+ + V RAAVEFYGP+RAK+LGPFS+N TP+YLTGE
Sbjct: 1 MAALIARSGLKALNIRQ---TRQQRMATVPRAAVEFYGPDRAKFLGPFSENDTPEYLTGE 57
Query: 234 FAGDYGWDT 260
F GDYGWDT
Sbjct: 58 FPGDYGWDT 66
>gb|ABD91646.1| major light-harvesting chlorophyll a/b protein 2.1 [Dunaliella
salina] gi|90191873|gb|ABD91648.1| major
light-harvesting chlorophyll a/b protein 2.1 [Dunaliella
salina]
Length = 253
Score = 80.5 bits (197), Expect = 2e-13
Identities = 39/69 (56%), Positives = 49/69 (71%)
Frame = +3
Query: 54 MASALAQRSFLGSTLRPVAPTQGKGTKQVTRAAVEFYGPERAKWLGPFSDNATPDYLTGE 233
MA+ +A+ +R T+ + V RAAVEFYGP+RAK+LGPFS+N TP+YLTGE
Sbjct: 1 MAALIARSGLKALNIRQ---TRQQRMATVPRAAVEFYGPDRAKFLGPFSENDTPEYLTGE 57
Query: 234 FAGDYGWDT 260
F GDYGWDT
Sbjct: 58 FPGDYGWDT 66
>gb|ABD91647.1| major light-harvesting chlorophyll a/b protein 2.2 [Dunaliella
salina] gi|90191875|gb|ABD91649.1| major
light-harvesting chlorophyll a/b protein 2.2 [Dunaliella
salina]
Length = 253
Score = 80.5 bits (197), Expect = 2e-13
Identities = 39/69 (56%), Positives = 49/69 (71%)
Frame = +3
Query: 54 MASALAQRSFLGSTLRPVAPTQGKGTKQVTRAAVEFYGPERAKWLGPFSDNATPDYLTGE 233
MA+ +A+ +R T+ + V RAAVEFYGP+RAK+LGPFS+N TP+YLTGE
Sbjct: 1 MAALIARSGLKALNIRQ---TRQQRMATVPRAAVEFYGPDRAKFLGPFSENDTPEYLTGE 57
Query: 234 FAGDYGWDT 260
F GDYGWDT
Sbjct: 58 FPGDYGWDT 66
>gb|AAC79711.1| chlorophyll a/b binding protein [Acetabularia acetabulum]
Length = 251
Score = 80.1 bits (196), Expect = 3e-13
Identities = 35/47 (74%), Positives = 41/47 (87%), Gaps = 1/47 (2%)
Frame = +3
Query: 123 KGTKQVT-RAAVEFYGPERAKWLGPFSDNATPDYLTGEFAGDYGWDT 260
KG K+V+ +AAVE+YGP+RAKWLGP+SD A P YLTGEF GDYGWDT
Sbjct: 20 KGNKRVSVQAAVEWYGPDRAKWLGPYSDGAVPSYLTGEFPGDYGWDT 66
>ref|XP_002952704.1| light-harvesting chlorophyll a/b-binding protein [Volvox carteri f.
nagariensis] gi|300262048|gb|EFJ46257.1|
light-harvesting chlorophyll a/b-binding protein [Volvox
carteri f. nagariensis]
Length = 251
Score = 79.0 bits (193), Expect = 7e-13
Identities = 37/66 (56%), Positives = 48/66 (72%)
Frame = +3
Query: 63 ALAQRSFLGSTLRPVAPTQGKGTKQVTRAAVEFYGPERAKWLGPFSDNATPDYLTGEFAG 242
A+ +S L S++RP A + + V RAA+E+YGP+R K+LGPFS+ TP YLTGEF G
Sbjct: 2 AVVAKSALRSSVRP-ATVASRAARVVPRAAIEWYGPDRPKFLGPFSEGDTPAYLTGEFPG 60
Query: 243 DYGWDT 260
DYGWDT
Sbjct: 61 DYGWDT 66
>ref|XP_001693987.1| light-harvesting protein of photosystem II [Chlamydomonas
reinhardtii] gi|15430556|dbj|BAB64413.1|
light-harvesting chlorophyll-a/b binding protein LhcII-3
[Chlamydomonas reinhardtii] gi|15430564|dbj|BAB64417.1|
light-harvesting chlorophyll-a/b binding protein LhcII-3
[Chlamydomonas reinhardtii] gi|158277154|gb|EDP02923.1|
light-harvesting protein of photosystem II
[Chlamydomonas reinhardtii]
Length = 249
Score = 78.2 bits (191), Expect = 1e-12
Identities = 36/66 (54%), Positives = 47/66 (71%)
Frame = +3
Query: 63 ALAQRSFLGSTLRPVAPTQGKGTKQVTRAAVEFYGPERAKWLGPFSDNATPDYLTGEFAG 242
A +S + S++RP G+ + V RAA+E+YGP+R K+LGPFS+ TP YLTGEF G
Sbjct: 2 AAIMKSAVRSSVRPTV--SGRSARVVPRAAIEWYGPDRPKFLGPFSEGDTPAYLTGEFPG 59
Query: 243 DYGWDT 260
DYGWDT
Sbjct: 60 DYGWDT 65
>tpg|DAA05906.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm8 [Acetabularia acetabulum]
Length = 220
Score = 78.2 bits (191), Expect = 1e-12
Identities = 33/48 (68%), Positives = 38/48 (79%)
Frame = +3
Query: 117 QGKGTKQVTRAAVEFYGPERAKWLGPFSDNATPDYLTGEFAGDYGWDT 260
Q K + V+R AVE+YGP+RAKWLGPFS+ P YLTGEF GDYGWDT
Sbjct: 14 QTKSIRNVSRNAVEWYGPDRAKWLGPFSEGDVPSYLTGEFPGDYGWDT 61
>dbj|BAA78595.1| hypothetical protein [Chlamydomonas sp. HS-5]
Length = 222
Score = 77.8 bits (190), Expect = 1e-12
Identities = 35/48 (72%), Positives = 39/48 (81%)
Frame = +3
Query: 117 QGKGTKQVTRAAVEFYGPERAKWLGPFSDNATPDYLTGEFAGDYGWDT 260
QG+ + V AVEFYGP+RAKWLGPFSD+ TP YLTGEF GDYGWDT
Sbjct: 18 QGERSTSVIARAVEFYGPDRAKWLGPFSDD-TPSYLTGEFPGDYGWDT 64
>ref|XP_002949075.1| hypothetical protein VOLCADRAFT_80470 [Volvox carteri f.
nagariensis] gi|300265820|gb|EFJ50010.1| hypothetical
protein VOLCADRAFT_80470 [Volvox carteri f. nagariensis]
Length = 252
Score = 77.8 bits (190), Expect = 1e-12
Identities = 35/67 (52%), Positives = 48/67 (71%)
Frame = +3
Query: 60 SALAQRSFLGSTLRPVAPTQGKGTKQVTRAAVEFYGPERAKWLGPFSDNATPDYLTGEFA 239
SA+ + + +++RP P + + V RAA+E+YGP+R K+LGPFS+ TP YLTGEF
Sbjct: 2 SAVVKSAVRSTSVRPT-PVGSRAARVVPRAAIEWYGPDRPKFLGPFSEGDTPAYLTGEFP 60
Query: 240 GDYGWDT 260
GDYGWDT
Sbjct: 61 GDYGWDT 67