BLASTX nr result
ID: Akebia26_contig00024783
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia26_contig00024783
(1086 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002283791.1| PREDICTED: pentatricopeptide repeat-containi... 541 e-151
emb|CAN72397.1| hypothetical protein VITISV_041201 [Vitis vinifera] 541 e-151
ref|XP_006488968.1| PREDICTED: pentatricopeptide repeat-containi... 525 e-146
ref|XP_006445545.1| hypothetical protein CICLE_v10014960mg [Citr... 525 e-146
ref|XP_007208240.1| hypothetical protein PRUPE_ppa016950mg, part... 496 e-138
ref|XP_004144134.1| PREDICTED: pentatricopeptide repeat-containi... 495 e-137
gb|EXB88915.1| hypothetical protein L484_003611 [Morus notabilis] 488 e-135
ref|XP_002303975.2| pentatricopeptide repeat-containing family p... 478 e-132
ref|XP_002523384.1| pentatricopeptide repeat-containing protein,... 475 e-131
ref|XP_004294930.1| PREDICTED: pentatricopeptide repeat-containi... 464 e-128
ref|XP_003556973.2| PREDICTED: pentatricopeptide repeat-containi... 447 e-123
ref|XP_007153011.1| hypothetical protein PHAVU_003G000200g [Phas... 443 e-122
ref|XP_007014654.1| Pentatricopeptide repeat (PPR) superfamily p... 436 e-120
ref|XP_002864446.1| pentatricopeptide repeat-containing protein ... 434 e-119
ref|NP_200442.1| pentatricopeptide repeat-containing protein [Ar... 432 e-118
ref|XP_006280289.1| hypothetical protein CARUB_v10026213mg [Caps... 428 e-117
ref|XP_006358733.1| PREDICTED: pentatricopeptide repeat-containi... 420 e-115
ref|XP_002455392.1| hypothetical protein SORBIDRAFT_03g010050 [S... 419 e-114
ref|XP_003589826.1| Pentatricopeptide repeat-containing protein ... 418 e-114
ref|XP_006344590.1| PREDICTED: pentatricopeptide repeat-containi... 417 e-114
>ref|XP_002283791.1| PREDICTED: pentatricopeptide repeat-containing protein At5g56310
[Vitis vinifera]
Length = 576
Score = 541 bits (1395), Expect = e-151
Identities = 263/362 (72%), Positives = 309/362 (85%)
Frame = -1
Query: 1086 SQTNSAREAIVLYKRIQIMGFRPDTYSFPFVLKAIVHLSALEIGKEIHGQVIRIGLYSDV 907
S A EAI+LY RI R DTYS PFVLKA+V L A+ +G++IH Q I GL SD+
Sbjct: 115 SNPELATEAILLYNRILASDLRFDTYSLPFVLKAVVRLLAIHVGRQIHCQAIGTGLVSDI 174
Query: 906 HILTGLIQMYSSCGGVISDARSLFDRMPIRDVVSWNAMVAGYAKVGEVDSARELFELMPE 727
H++T LIQMYSSCG +S+AR LFD + RDV WNAMVAGYAKVG+VD+AR LFE MPE
Sbjct: 175 HVVTALIQMYSSCG-CVSEARQLFDGVCFRDVAFWNAMVAGYAKVGDVDNARHLFERMPE 233
Query: 726 RNVISWTVMIGGYSQMNQPNEAITIFRRMQVEEVEPDEITMLAALSACAHLGALELGEWI 547
RNVISWT +I GY+QM++PNEAIT+FRRMQ+EEVEPDEI MLAALSACAHLGALELGEWI
Sbjct: 234 RNVISWTAVIAGYAQMDRPNEAITMFRRMQLEEVEPDEIAMLAALSACAHLGALELGEWI 293
Query: 546 HDYIDKHRIHKIVPLSNALIDMYVKSGKIEKALEVFETMKLRSVITWTTMVAGLALHGLG 367
H+YIDKH + KIVPL+NALIDMY K GKIEKALEVF+ M+ +SVITWT+M+ GLALHGLG
Sbjct: 294 HNYIDKHGLSKIVPLNNALIDMYAKCGKIEKALEVFKNMEHKSVITWTSMIDGLALHGLG 353
Query: 366 REALEMFSRMERSRVKPNEVTFIAILSACSHVGLVDIGRWYFDNMNSRYQIKPKIEHYGC 187
REALEMFS MER+R+KPNE+TF+AILSAC HVGLV++GRWYF M ++Y IKPKI+HYGC
Sbjct: 354 REALEMFSCMERNRIKPNEITFVAILSACCHVGLVEMGRWYFKCMGTKYGIKPKIQHYGC 413
Query: 186 MVDLLGRAGYLEEAQELVRGMPYEANGAIWGSLLAASRVHGDVVLGECALKHLIKLEPHN 7
M+DLLGRAG+L+EAQELVRGMP+EAN IWGSLLAA+R+HGD LG+ AL+HLIK+EPHN
Sbjct: 414 MIDLLGRAGFLQEAQELVRGMPFEANAPIWGSLLAAARIHGDAELGKQALQHLIKVEPHN 473
Query: 6 SG 1
SG
Sbjct: 474 SG 475
>emb|CAN72397.1| hypothetical protein VITISV_041201 [Vitis vinifera]
Length = 576
Score = 541 bits (1395), Expect = e-151
Identities = 263/362 (72%), Positives = 309/362 (85%)
Frame = -1
Query: 1086 SQTNSAREAIVLYKRIQIMGFRPDTYSFPFVLKAIVHLSALEIGKEIHGQVIRIGLYSDV 907
S A EAI+LY RI R DTYS PFVLKA+V L A+ +G++IH Q I GL SD+
Sbjct: 115 SNPELATEAILLYNRILASDLRFDTYSLPFVLKAVVRLLAIHVGRQIHCQAIGTGLVSDI 174
Query: 906 HILTGLIQMYSSCGGVISDARSLFDRMPIRDVVSWNAMVAGYAKVGEVDSARELFELMPE 727
H++T LIQMYSSCG +S+AR LFD + RDV WNAMVAGYAKVG+VD+AR LFE MPE
Sbjct: 175 HVVTALIQMYSSCG-CVSEARQLFDGVCFRDVAFWNAMVAGYAKVGDVDNARHLFERMPE 233
Query: 726 RNVISWTVMIGGYSQMNQPNEAITIFRRMQVEEVEPDEITMLAALSACAHLGALELGEWI 547
RNVISWT +I GY+QM++PNEAIT+FRRMQ+EEVEPDEI MLAALSACAHLGALELGEWI
Sbjct: 234 RNVISWTAVIAGYAQMDRPNEAITMFRRMQLEEVEPDEIAMLAALSACAHLGALELGEWI 293
Query: 546 HDYIDKHRIHKIVPLSNALIDMYVKSGKIEKALEVFETMKLRSVITWTTMVAGLALHGLG 367
H+YIDKH + KIVPL+NALIDMY K GKIEKALEVF+ M+ +SVITWT+M+ GLALHGLG
Sbjct: 294 HNYIDKHGLSKIVPLNNALIDMYAKCGKIEKALEVFKNMEHKSVITWTSMIDGLALHGLG 353
Query: 366 REALEMFSRMERSRVKPNEVTFIAILSACSHVGLVDIGRWYFDNMNSRYQIKPKIEHYGC 187
REALEMFS MER+R+KPNE+TF+AILSAC HVGLV++GRWYF M ++Y IKPKI+HYGC
Sbjct: 354 REALEMFSCMERNRIKPNEITFVAILSACCHVGLVEMGRWYFKCMGTKYGIKPKIQHYGC 413
Query: 186 MVDLLGRAGYLEEAQELVRGMPYEANGAIWGSLLAASRVHGDVVLGECALKHLIKLEPHN 7
M+DLLGRAG+L+EAQELVRGMP+EAN IWGSLLAA+R+HGD LG+ AL+HLIK+EPHN
Sbjct: 414 MIDLLGRAGFLQEAQELVRGMPFEANAPIWGSLLAAARIHGDAELGKQALQHLIKVEPHN 473
Query: 6 SG 1
SG
Sbjct: 474 SG 475
>ref|XP_006488968.1| PREDICTED: pentatricopeptide repeat-containing protein At5g56310-like
isoform X1 [Citrus sinensis]
gi|568871598|ref|XP_006488969.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g56310-like isoform X2 [Citrus sinensis]
Length = 564
Score = 525 bits (1353), Expect = e-146
Identities = 256/363 (70%), Positives = 310/363 (85%), Gaps = 2/363 (0%)
Frame = -1
Query: 1083 QTNSAREAIVLYKRIQIMGFRPDTYSFPFVLKAIVHLSALEIGKEIHGQVIRIGLYSDVH 904
QT++ A++LY +IQ RPD YSFPFVLKA+V LS +E+G+EIH Q + GL SDVH
Sbjct: 110 QTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVH 169
Query: 903 ILTGLIQMYSSCGGVISDARSLFDRMPIR--DVVSWNAMVAGYAKVGEVDSARELFELMP 730
++ LIQMY+SC I DAR +FD + +R +V WN MVAGYAKVG++++AR LFELM
Sbjct: 170 VVAALIQMYASCK-CIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMT 228
Query: 729 ERNVISWTVMIGGYSQMNQPNEAITIFRRMQVEEVEPDEITMLAALSACAHLGALELGEW 550
E+NVISWT +I GY+QM+QPNEAIT+FRRMQVE V+PDEI MLAALSACA LGA+ELGEW
Sbjct: 229 EKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEW 288
Query: 549 IHDYIDKHRIHKIVPLSNALIDMYVKSGKIEKALEVFETMKLRSVITWTTMVAGLALHGL 370
IH+YI+++ ++ IVPL+NALIDMY KSGKI KAL+VFE MK +SVITWTTM+AGLALHGL
Sbjct: 289 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 348
Query: 369 GREALEMFSRMERSRVKPNEVTFIAILSACSHVGLVDIGRWYFDNMNSRYQIKPKIEHYG 190
GREAL+MFSRMER+RVKPNE+TFIAILSAC HVGLV++GR YF+ M SRY I+PKIE YG
Sbjct: 349 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYG 408
Query: 189 CMVDLLGRAGYLEEAQELVRGMPYEANGAIWGSLLAASRVHGDVVLGECALKHLIKLEPH 10
CM+DLLGRAGYL+EA++L+R MP+EAN AIWGSLLAAS ++GDV LGECAL+HLIKLEPH
Sbjct: 409 CMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPH 468
Query: 9 NSG 1
NSG
Sbjct: 469 NSG 471
Score = 109 bits (272), Expect = 2e-21
Identities = 89/365 (24%), Positives = 163/365 (44%), Gaps = 43/365 (11%)
Frame = -1
Query: 981 VHLSALEIGKEIHGQVIRIGLYSDVHILTG---LIQMYSSCGGVISDARSLFDR---MPI 820
+H S+L +GK I +RI ++ + T L+ + S C +D + LF M +
Sbjct: 4 LHKSSLILGKSISLSSLRI-IHKRLICCTSAADLVTLLSQCK--CADIKHLFAAHGFMIV 60
Query: 819 RDVVSWNAMVAGY----AKVGEVDSARELFELMPERNVISWTVMIGGYSQMNQPNEAITI 652
R + N +++ + + +G D A +F + +V + I Q + P A+ +
Sbjct: 61 RGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVIL 120
Query: 651 FRRMQVEEVEPDEITMLAALSACAHLGALELGEWIHDYI-------DKHRIHKIVPLS-- 499
+ ++Q + PD + L A L +ELG IH D H + ++ +
Sbjct: 121 YNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYAS 180
Query: 498 ------------------------NALIDMYVKSGKIEKALEVFETMKLRSVITWTTMVA 391
N ++ Y K G + A +FE M ++VI+WTT++A
Sbjct: 181 CKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIA 240
Query: 390 GLALHGLGREALEMFSRMERSRVKPNEVTFIAILSACSHVGLVDIGRWYFDNMNSRYQIK 211
G A EA+ +F RM+ VKP+E+ +A LSAC+ +G V++G W N +Y +
Sbjct: 241 GYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEW-IHNYIEQYGLN 299
Query: 210 PKIEHYGCMVDLLGRAGYLEEAQELVRGMPYEANGAIWGSLLAASRVHGDVVLGECALKH 31
+ ++D+ ++G + +A ++ M + W +++A +HG LG AL
Sbjct: 300 TIVPLNNALIDMYAKSGKIGKALQVFENMK-NKSVITWTTMIAGLALHG---LGREALDM 355
Query: 30 LIKLE 16
++E
Sbjct: 356 FSRME 360
Score = 104 bits (259), Expect = 7e-20
Identities = 79/285 (27%), Positives = 136/285 (47%), Gaps = 5/285 (1%)
Frame = -1
Query: 1086 SQTNSAREAIVLYKRIQIMGFRPDTYSFPFVLKAIVHLSALEIGKEIHGQVIRIGLYSDV 907
+Q + EAI L++R+Q+ +PD + L A L A+E+G+ IH + + GL + V
Sbjct: 243 AQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIV 302
Query: 906 HILTGLIQMYSSCGGVISDARSLFDRMPIRDVVSWNAMVAGYAKVGEVDSARELFELMPE 727
+ LI MY+ G I A +F+ M + V++W M+AG A G
Sbjct: 303 PLNNALIDMYAK-SGKIGKALQVFENMKNKSVITWTTMIAGLALHG-------------- 347
Query: 726 RNVISWTVMIGGYSQMNQPNEAITIFRRMQVEEVEPDEITMLAALSACAHLGALELG-EW 550
+G EA+ +F RM+ V+P+EIT +A LSAC H+G +ELG +
Sbjct: 348 ---------LG--------REALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 390
Query: 549 IHDYIDKHRIHKIVPLSNALIDMYVKSGKIEKALEVFETMKLR-SVITWTTMVAGLALHG 373
+ ++ I + +ID+ ++G +++A ++ M + W +++A ++G
Sbjct: 391 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 450
Query: 372 ---LGREALEMFSRMERSRVKPNEVTFIAILSACSHVGLVDIGRW 247
LG AL+ ++E P+ AILS + +GRW
Sbjct: 451 DVELGECALQHLIKLE-----PHNSGNYAILSNIYAI----LGRW 486
>ref|XP_006445545.1| hypothetical protein CICLE_v10014960mg [Citrus clementina]
gi|557548156|gb|ESR58785.1| hypothetical protein
CICLE_v10014960mg [Citrus clementina]
Length = 510
Score = 525 bits (1353), Expect = e-146
Identities = 256/363 (70%), Positives = 310/363 (85%), Gaps = 2/363 (0%)
Frame = -1
Query: 1083 QTNSAREAIVLYKRIQIMGFRPDTYSFPFVLKAIVHLSALEIGKEIHGQVIRIGLYSDVH 904
QT++ A++LY +IQ RPD YSFPFVLKA+V LS +E+G+EIH Q + GL SDVH
Sbjct: 53 QTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVH 112
Query: 903 ILTGLIQMYSSCGGVISDARSLFDRMPIR--DVVSWNAMVAGYAKVGEVDSARELFELMP 730
++ LIQMY+SC I DAR +FD + +R +V WN MVAGYAKVG++++AR LFELM
Sbjct: 113 VVAALIQMYASCK-CIYDARKVFDELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMT 171
Query: 729 ERNVISWTVMIGGYSQMNQPNEAITIFRRMQVEEVEPDEITMLAALSACAHLGALELGEW 550
E+NVISWT +I GY+QM+QPNEAIT+FRRMQVE V+PDEI MLAALSACA LGA+ELGEW
Sbjct: 172 EKNVISWTTLIAGYAQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEW 231
Query: 549 IHDYIDKHRIHKIVPLSNALIDMYVKSGKIEKALEVFETMKLRSVITWTTMVAGLALHGL 370
IH+YI+++ ++ IVPL+NALIDMY KSGKI KAL+VFE MK +SVITWTTM+AGLALHGL
Sbjct: 232 IHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGL 291
Query: 369 GREALEMFSRMERSRVKPNEVTFIAILSACSHVGLVDIGRWYFDNMNSRYQIKPKIEHYG 190
GREAL+MFSRMER+RVKPNE+TFIAILSAC HVGLV++GR YF+ M SRY I+PKIE YG
Sbjct: 292 GREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYG 351
Query: 189 CMVDLLGRAGYLEEAQELVRGMPYEANGAIWGSLLAASRVHGDVVLGECALKHLIKLEPH 10
CM+DLLGRAGYL+EA++L+R MP+EAN AIWGSLLAAS ++GDV LGECAL+HLIKLEPH
Sbjct: 352 CMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELGECALQHLIKLEPH 411
Query: 9 NSG 1
NSG
Sbjct: 412 NSG 414
Score = 104 bits (260), Expect = 6e-20
Identities = 71/288 (24%), Positives = 128/288 (44%), Gaps = 33/288 (11%)
Frame = -1
Query: 780 AKVGEVDSARELFELMPERNVISWTVMIGGYSQMNQPNEAITIFRRMQVEEVEPDEITML 601
+ +G D A +F + +V + I Q + P A+ ++ ++Q + PD +
Sbjct: 21 SSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFP 80
Query: 600 AALSACAHLGALELGEWIHDYI-------DKHRIHKIVPLS------------------- 499
L A L +ELG IH D H + ++ +
Sbjct: 81 FVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLR 140
Query: 498 -------NALIDMYVKSGKIEKALEVFETMKLRSVITWTTMVAGLALHGLGREALEMFSR 340
N ++ Y K G + A +FE M ++VI+WTT++AG A EA+ +F R
Sbjct: 141 VWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRR 200
Query: 339 MERSRVKPNEVTFIAILSACSHVGLVDIGRWYFDNMNSRYQIKPKIEHYGCMVDLLGRAG 160
M+ VKP+E+ +A LSAC+ +G V++G W N +Y + + ++D+ ++G
Sbjct: 201 MQVENVKPDEIAMLAALSACAQLGAVELGEW-IHNYIEQYGLNTIVPLNNALIDMYAKSG 259
Query: 159 YLEEAQELVRGMPYEANGAIWGSLLAASRVHGDVVLGECALKHLIKLE 16
+ +A ++ M + W +++A +HG LG AL ++E
Sbjct: 260 KIGKALQVFENMK-NKSVITWTTMIAGLALHG---LGREALDMFSRME 303
Score = 104 bits (259), Expect = 7e-20
Identities = 79/285 (27%), Positives = 136/285 (47%), Gaps = 5/285 (1%)
Frame = -1
Query: 1086 SQTNSAREAIVLYKRIQIMGFRPDTYSFPFVLKAIVHLSALEIGKEIHGQVIRIGLYSDV 907
+Q + EAI L++R+Q+ +PD + L A L A+E+G+ IH + + GL + V
Sbjct: 186 AQMDQPNEAITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIV 245
Query: 906 HILTGLIQMYSSCGGVISDARSLFDRMPIRDVVSWNAMVAGYAKVGEVDSARELFELMPE 727
+ LI MY+ G I A +F+ M + V++W M+AG A G
Sbjct: 246 PLNNALIDMYAK-SGKIGKALQVFENMKNKSVITWTTMIAGLALHG-------------- 290
Query: 726 RNVISWTVMIGGYSQMNQPNEAITIFRRMQVEEVEPDEITMLAALSACAHLGALELG-EW 550
+G EA+ +F RM+ V+P+EIT +A LSAC H+G +ELG +
Sbjct: 291 ---------LG--------REALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRY 333
Query: 549 IHDYIDKHRIHKIVPLSNALIDMYVKSGKIEKALEVFETMKLR-SVITWTTMVAGLALHG 373
+ ++ I + +ID+ ++G +++A ++ M + W +++A ++G
Sbjct: 334 FNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYG 393
Query: 372 ---LGREALEMFSRMERSRVKPNEVTFIAILSACSHVGLVDIGRW 247
LG AL+ ++E P+ AILS + +GRW
Sbjct: 394 DVELGECALQHLIKLE-----PHNSGNYAILSNIYAI----LGRW 429
>ref|XP_007208240.1| hypothetical protein PRUPE_ppa016950mg, partial [Prunus persica]
gi|462403882|gb|EMJ09439.1| hypothetical protein
PRUPE_ppa016950mg, partial [Prunus persica]
Length = 532
Score = 496 bits (1276), Expect = e-138
Identities = 247/369 (66%), Positives = 294/369 (79%), Gaps = 11/369 (2%)
Frame = -1
Query: 1074 SAREAIVLYKRIQIMGFRPDTYSFPFVLKAIVHLSALEI----GKEIHGQVIRIGLYSDV 907
S AI LY RIQ+ RPDTYSFPFVLKA+V L+ ++ G +IH +I IG D
Sbjct: 75 SPSHAISLYNRIQLAALRPDTYSFPFVLKAVVRLAPPQVQRLVGAQIHCHIIGIGFDMDA 134
Query: 906 HILTGLIQMYSSCGGVISDARSLFD-----RMPIRDVVSWNAMVAGYAKVGEVDSARELF 742
+LT LI MYSSCG +SDAR+LFD RDV WNAM+AGYAK G+VD+AR LF
Sbjct: 135 SVLTALIHMYSSCG-CVSDARTLFDGAAAFAFAFRDVALWNAMIAGYAKSGDVDNARHLF 193
Query: 741 ELMPER--NVISWTVMIGGYSQMNQPNEAITIFRRMQVEEVEPDEITMLAALSACAHLGA 568
ELMP R NVISWT +I GY+Q+++P+EAIT+FRRMQ+E V+PDEI+MLAALSACAHLGA
Sbjct: 194 ELMPPRIRNVISWTALIAGYAQVDRPHEAITVFRRMQLENVQPDEISMLAALSACAHLGA 253
Query: 567 LELGEWIHDYIDKHRIHKIVPLSNALIDMYVKSGKIEKALEVFETMKLRSVITWTTMVAG 388
L LGEWIH+YI+KH K+V L+NALIDMY KSG I KAL+VFE K ++V+TWTTM+AG
Sbjct: 254 LHLGEWIHNYIEKHEFRKLVSLNNALIDMYAKSGNITKALQVFENTKCKTVVTWTTMIAG 313
Query: 387 LALHGLGREALEMFSRMERSRVKPNEVTFIAILSACSHVGLVDIGRWYFDNMNSRYQIKP 208
LALHGLGREALEMF++MER ++KPN++TFIAILSACSH LV+IG WYF M S+Y+IKP
Sbjct: 314 LALHGLGREALEMFAQMERVKIKPNDITFIAILSACSHGRLVEIGHWYFSIMVSKYRIKP 373
Query: 207 KIEHYGCMVDLLGRAGYLEEAQELVRGMPYEANGAIWGSLLAASRVHGDVVLGECALKHL 28
KI HYGCM+DLL RAGYL+EA ELVR MP+EAN AIWGSLLAAS +HGD LG+ AL+HL
Sbjct: 374 KIVHYGCMIDLLARAGYLQEAHELVRQMPFEANAAIWGSLLAASNIHGDAELGQHALQHL 433
Query: 27 IKLEPHNSG 1
I LEPHNSG
Sbjct: 434 IMLEPHNSG 442
Score = 103 bits (256), Expect = 2e-19
Identities = 70/256 (27%), Positives = 123/256 (48%), Gaps = 5/256 (1%)
Frame = -1
Query: 1086 SQTNSAREAIVLYKRIQIMGFRPDTYSFPFVLKAIVHLSALEIGKEIHGQVIRIGLYSDV 907
+Q + EAI +++R+Q+ +PD S L A HL AL +G+ IH + + V
Sbjct: 214 AQVDRPHEAITVFRRMQLENVQPDEISMLAALSACAHLGALHLGEWIHNYIEKHEFRKLV 273
Query: 906 HILTGLIQMYSSCGGVISDARSLFDRMPIRDVVSWNAMVAGYAKVGEVDSARELFELMPE 727
+ LI MY+ G I+ A +F+ + VV+W M+AG A G
Sbjct: 274 SLNNALIDMYAKSGN-ITKALQVFENTKCKTVVTWTTMIAGLALHG-------------- 318
Query: 726 RNVISWTVMIGGYSQMNQPNEAITIFRRMQVEEVEPDEITMLAALSACAHLGALELGEWI 547
+G EA+ +F +M+ +++P++IT +A LSAC+H +E+G W
Sbjct: 319 ---------LG--------REALEMFAQMERVKIKPNDITFIAILSACSHGRLVEIGHWY 361
Query: 546 HD-YIDKHRIHKIVPLSNALIDMYVKSGKIEKALEVFETMKLR-SVITWTTMVAGLALHG 373
+ K+RI + +ID+ ++G +++A E+ M + W +++A +HG
Sbjct: 362 FSIMVSKYRIKPKIVHYGCMIDLLARAGYLQEAHELVRQMPFEANAAIWGSLLAASNIHG 421
Query: 372 ---LGREALEMFSRME 334
LG+ AL+ +E
Sbjct: 422 DAELGQHALQHLIMLE 437
>ref|XP_004144134.1| PREDICTED: pentatricopeptide repeat-containing protein At5g56310-like
[Cucumis sativus] gi|449493602|ref|XP_004159370.1|
PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Cucumis sativus]
Length = 548
Score = 495 bits (1275), Expect = e-137
Identities = 242/362 (66%), Positives = 295/362 (81%)
Frame = -1
Query: 1086 SQTNSAREAIVLYKRIQIMGFRPDTYSFPFVLKAIVHLSALEIGKEIHGQVIRIGLYSDV 907
S+T+S AI LY RI+I G RPD+YS P VLKA+V LSA+E+G++IH Q + L DV
Sbjct: 98 SKTSSPINAIWLYTRIRIDGLRPDSYSIPSVLKAVVKLSAVEVGRQIHTQTVSSALDMDV 157
Query: 906 HILTGLIQMYSSCGGVISDARSLFDRMPIRDVVSWNAMVAGYAKVGEVDSARELFELMPE 727
++ T LIQMYSSCG +SDAR LFD + +DV WNAMVAGY KVGE+ SAR++F MP+
Sbjct: 158 NVATSLIQMYSSCG-FVSDARKLFDFVGFKDVALWNAMVAGYVKVGELKSARKVFNEMPQ 216
Query: 726 RNVISWTVMIGGYSQMNQPNEAITIFRRMQVEEVEPDEITMLAALSACAHLGALELGEWI 547
RNVISWT +I GY+Q N+P+EAI +FR+MQ+EEVEPDEI MLA LSACA LGALELGEWI
Sbjct: 217 RNVISWTTLIAGYAQTNRPHEAIELFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWI 276
Query: 546 HDYIDKHRIHKIVPLSNALIDMYVKSGKIEKALEVFETMKLRSVITWTTMVAGLALHGLG 367
H+YI+KH + +IV L NALIDMY KSG I +ALEVFE MK +SVITW+T++A LALHGLG
Sbjct: 277 HNYIEKHGLCRIVSLYNALIDMYAKSGNIRRALEVFENMKQKSVITWSTVIAALALHGLG 336
Query: 366 REALEMFSRMERSRVKPNEVTFIAILSACSHVGLVDIGRWYFDNMNSRYQIKPKIEHYGC 187
EA++MF RME+++V+PNEVTF+AILSACSHVG+VD+GR+YFD M S Y+I+PKIEHYGC
Sbjct: 337 GEAIDMFLRMEKAKVRPNEVTFVAILSACSHVGMVDVGRYYFDQMQSMYKIEPKIEHYGC 396
Query: 186 MVDLLGRAGYLEEAQELVRGMPYEANGAIWGSLLAASRVHGDVVLGECALKHLIKLEPHN 7
M+DLL RAGYL+EAQ+L+ MP+EAN IWGSLLAAS H D L + ALKHL KLEP N
Sbjct: 397 MIDLLARAGYLQEAQKLLHDMPFEANAMIWGSLLAASNTHRDAELAQLALKHLAKLEPGN 456
Query: 6 SG 1
SG
Sbjct: 457 SG 458
Score = 101 bits (251), Expect = 6e-19
Identities = 62/263 (23%), Positives = 124/263 (47%), Gaps = 31/263 (11%)
Frame = -1
Query: 711 WTVMIGGYSQMNQPNEAITIFRRMQVEEVEPDEITMLAALSACAHLGALELGEWIHDYID 532
+ I S+ + P AI ++ R++++ + PD ++ + L A L A+E+G IH
Sbjct: 90 YNTAIKALSKTSSPINAIWLYTRIRIDGLRPDSYSIPSVLKAVVKLSAVEVGRQIHTQTV 149
Query: 531 KHRIHKIVPLSNALIDMYVKSGKIEKALEVFETMKLRSVITWT----------------- 403
+ V ++ +LI MY G + A ++F+ + + V W
Sbjct: 150 SSALDMDVNVATSLIQMYSSCGFVSDARKLFDFVGFKDVALWNAMVAGYVKVGELKSARK 209
Query: 402 --------------TMVAGLALHGLGREALEMFSRMERSRVKPNEVTFIAILSACSHVGL 265
T++AG A EA+E+F +M+ V+P+E+ +A+LSAC+ +G
Sbjct: 210 VFNEMPQRNVISWTTLIAGYAQTNRPHEAIELFRKMQLEEVEPDEIAMLAVLSACADLGA 269
Query: 264 VDIGRWYFDNMNSRYQIKPKIEHYGCMVDLLGRAGYLEEAQELVRGMPYEANGAIWGSLL 85
+++G W N ++ + + Y ++D+ ++G + A E+ M + + W +++
Sbjct: 270 LELGEW-IHNYIEKHGLCRIVSLYNALIDMYAKSGNIRRALEVFENMK-QKSVITWSTVI 327
Query: 84 AASRVHGDVVLGECALKHLIKLE 16
AA +HG LG A+ +++E
Sbjct: 328 AALALHG---LGGEAIDMFLRME 347
>gb|EXB88915.1| hypothetical protein L484_003611 [Morus notabilis]
Length = 524
Score = 488 bits (1256), Expect = e-135
Identities = 233/358 (65%), Positives = 293/358 (81%)
Frame = -1
Query: 1074 SAREAIVLYKRIQIMGFRPDTYSFPFVLKAIVHLSALEIGKEIHGQVIRIGLYSDVHILT 895
S EA+ LY ++ + G RPDTY+FPFVLKA++ LSA+E+G++IH Q +R GL SDV+ +T
Sbjct: 78 SPSEAVSLYNKLLLTGLRPDTYTFPFVLKAVIKLSAVEVGRQIHCQALRTGLDSDVNAVT 137
Query: 894 GLIQMYSSCGGVISDARSLFDRMPIRDVVSWNAMVAGYAKVGEVDSARELFELMPERNVI 715
L++MYS CG ++ D+R +FD M DV WNAMVAGYAK G+VD+AR++FE MPERN+I
Sbjct: 138 ALVRMYSCCGSIL-DSRRMFDEMSFWDVALWNAMVAGYAKAGDVDNARKVFEQMPERNLI 196
Query: 714 SWTVMIGGYSQMNQPNEAITIFRRMQVEEVEPDEITMLAALSACAHLGALELGEWIHDYI 535
SWT +I GY+QM +P EAI +F+RM +E VEPDE+ +LA LSACAHLG+L LGE IH+YI
Sbjct: 197 SWTSVIAGYAQMKRPEEAILLFKRMLLENVEPDEVAILALLSACAHLGSLRLGERIHNYI 256
Query: 534 DKHRIHKIVPLSNALIDMYVKSGKIEKALEVFETMKLRSVITWTTMVAGLALHGLGREAL 355
K + + L+NALIDMYVKSG I KAL VFE+MK RSV+TWTTM+AGLALHGLGREA
Sbjct: 257 QKRGFSRKLRLNNALIDMYVKSGSIRKALNVFESMKERSVVTWTTMLAGLALHGLGREAS 316
Query: 354 EMFSRMERSRVKPNEVTFIAILSACSHVGLVDIGRWYFDNMNSRYQIKPKIEHYGCMVDL 175
MFSRME + VKPN++TFIA+LSAC H GLV++GRWYF+NM+SRY I+PKIEHYGCM+DL
Sbjct: 317 VMFSRMESAVVKPNDITFIAVLSACRHAGLVEMGRWYFNNMDSRYGIQPKIEHYGCMIDL 376
Query: 174 LGRAGYLEEAQELVRGMPYEANGAIWGSLLAASRVHGDVVLGECALKHLIKLEPHNSG 1
LGR GYL+EA ELV+ MP++AN AIWGSLL AS +HG+ LGE AL+HL+ LEP+NSG
Sbjct: 377 LGRGGYLQEAWELVKAMPFKANAAIWGSLLGASNMHGNAELGERALQHLMVLEPYNSG 434
Score = 105 bits (262), Expect = 3e-20
Identities = 72/256 (28%), Positives = 121/256 (47%), Gaps = 5/256 (1%)
Frame = -1
Query: 1086 SQTNSAREAIVLYKRIQIMGFRPDTYSFPFVLKAIVHLSALEIGKEIHGQVIRIGLYSDV 907
+Q EAI+L+KR+ + PD + +L A HL +L +G+ IH + + G +
Sbjct: 206 AQMKRPEEAILLFKRMLLENVEPDEVAILALLSACAHLGSLRLGERIHNYIQKRGFSRKL 265
Query: 906 HILTGLIQMYSSCGGVISDARSLFDRMPIRDVVSWNAMVAGYAKVGEVDSARELFELMPE 727
+ LI MY G I A ++F+ M R VV+W M+AG A G
Sbjct: 266 RLNNALIDMYVKSGS-IRKALNVFESMKERSVVTWTTMLAGLALHG-------------- 310
Query: 726 RNVISWTVMIGGYSQMNQPNEAITIFRRMQVEEVEPDEITMLAALSACAHLGALELGEWI 547
+G EA +F RM+ V+P++IT +A LSAC H G +E+G W
Sbjct: 311 ---------LG--------REASVMFSRMESAVVKPNDITFIAVLSACRHAGLVEMGRWY 353
Query: 546 HDYID-KHRIHKIVPLSNALIDMYVKSGKIEKALEVFETMKLR-SVITWTTMVAGLALHG 373
+ +D ++ I + +ID+ + G +++A E+ + M + + W +++ +HG
Sbjct: 354 FNNMDSRYGIQPKIEHYGCMIDLLGRGGYLQEAWELVKAMPFKANAAIWGSLLGASNMHG 413
Query: 372 ---LGREALEMFSRME 334
LG AL+ +E
Sbjct: 414 NAELGERALQHLMVLE 429
>ref|XP_002303975.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550343649|gb|EEE78954.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 543
Score = 478 bits (1229), Expect = e-132
Identities = 234/366 (63%), Positives = 288/366 (78%), Gaps = 4/366 (1%)
Frame = -1
Query: 1086 SQTNSAREAIVLYKRIQIMGFRPDTYSFPFVLKAIVHLSALEIGKEIHGQVIRIGLYSDV 907
S + +I LY IQ+ G RPD+YSFPF LKA+ S+++ G+++H Q IR GL+SD+
Sbjct: 89 SSPTHPKASIFLYNNIQLAGLRPDSYSFPFALKAVTRFSSIQTGRQLHSQSIRFGLHSDL 148
Query: 906 HILTGLIQMYSSCG-GVISDARSLFDRMPIR--DVVSWNAMVAGYAKVGEVDSARELFEL 736
H+LT +QMYSS G G I DAR +FD M + DV WNAM+ GYAK G++ +AR+LFE
Sbjct: 149 HVLTAFVQMYSSFGSGCICDARKMFDGMSMSTGDVALWNAMLNGYAKHGDLCNARDLFER 208
Query: 735 MPERNVISWTVMIGGYSQMNQPNEAITIFRRMQVEEVEPDEITMLAALSACAHLGALELG 556
MP+RNVISWT +I GY+Q N+P++AI +FRRMQ+E VEPDEI ML AL+ACA LGALELG
Sbjct: 209 MPQRNVISWTALITGYAQANRPHDAIALFRRMQLENVEPDEIAMLVALTACARLGALELG 268
Query: 555 EWIHDYIDKHRIHKI-VPLSNALIDMYVKSGKIEKALEVFETMKLRSVITWTTMVAGLAL 379
EWI YID+ + +PL+NALIDMY KSG I+ AL+VFE M +++ITWTTM+AGLAL
Sbjct: 269 EWIRHYIDRLGLLTTNIPLNNALIDMYAKSGDIKSALQVFENMNHKTIITWTTMIAGLAL 328
Query: 378 HGLGREALEMFSRMERSRVKPNEVTFIAILSACSHVGLVDIGRWYFDNMNSRYQIKPKIE 199
HGLG EALEMFSRMER+RVKPN++TFIAILSACSHVGLV GRWYF+ M SRY I+PKIE
Sbjct: 329 HGLGTEALEMFSRMERARVKPNDITFIAILSACSHVGLVQTGRWYFNRMISRYGIEPKIE 388
Query: 198 HYGCMVDLLGRAGYLEEAQELVRGMPYEANGAIWGSLLAASRVHGDVVLGECALKHLIKL 19
HYGCM+DLLGRAG+L+EAQ L+ MP+E N IWGSLLAA HGD LGE AL+HL++L
Sbjct: 389 HYGCMIDLLGRAGHLKEAQTLLAQMPFEPNAVIWGSLLAACNTHGDPELGELALQHLLEL 448
Query: 18 EPHNSG 1
EP NSG
Sbjct: 449 EPDNSG 454
>ref|XP_002523384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223537334|gb|EEF38963.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 538
Score = 475 bits (1223), Expect = e-131
Identities = 229/356 (64%), Positives = 288/356 (80%), Gaps = 2/356 (0%)
Frame = -1
Query: 1062 AIVLYKRIQIMGFRPDTYSFPFVLKAIVHLSALEIGKEIHGQVIRIGLYSDVHILTGLIQ 883
+I L+ RIQ RPD+YSFPF LKA++ LSA + G + H Q IR GL+S +H+L LI+
Sbjct: 94 SIFLFNRIQSARLRPDSYSFPFALKAVIRLSATKTGLQFHSQAIRFGLHSHLHVLVSLIR 153
Query: 882 MYSSCGGVISDARSLFDRMPI--RDVVSWNAMVAGYAKVGEVDSARELFELMPERNVISW 709
MYSS ISDAR LFD +P+ R+V WNAM+ YAK+ ++ +A+ LF+ MP+RN+ISW
Sbjct: 154 MYSSSH--ISDARKLFDGIPLTARNVALWNAMLTSYAKICDMPNAQHLFDSMPQRNLISW 211
Query: 708 TVMIGGYSQMNQPNEAITIFRRMQVEEVEPDEITMLAALSACAHLGALELGEWIHDYIDK 529
T +I GY+ +N+P++AI IFR MQ++ V PDEIT+LA LSACA LGALELGEWI +YID
Sbjct: 212 TALISGYAHINRPHQAIAIFRTMQLQNVVPDEITLLAVLSACAQLGALELGEWIRNYIDI 271
Query: 528 HRIHKIVPLSNALIDMYVKSGKIEKALEVFETMKLRSVITWTTMVAGLALHGLGREALEM 349
H +H+ VPL NALIDMY KSG I++AL +FE+MK ++++TWTTM+AGLALHGLG +ALEM
Sbjct: 272 HGLHRNVPLHNALIDMYAKSGNIKRALLIFESMKHKTIVTWTTMIAGLALHGLGTQALEM 331
Query: 348 FSRMERSRVKPNEVTFIAILSACSHVGLVDIGRWYFDNMNSRYQIKPKIEHYGCMVDLLG 169
FSRMER RVKPNE+TFIA+LSACSHVGLV + R +F NM SRY I+PKIEHYGCM+DLLG
Sbjct: 332 FSRMERDRVKPNEITFIAVLSACSHVGLVQLARSFFTNMRSRYTIQPKIEHYGCMIDLLG 391
Query: 168 RAGYLEEAQELVRGMPYEANGAIWGSLLAASRVHGDVVLGECALKHLIKLEPHNSG 1
RAGYL+EAQ+L++ MP+E N AIWGSLLAAS HGD +LGE LKHLI+LEP+NSG
Sbjct: 392 RAGYLQEAQQLLQQMPFEPNAAIWGSLLAASYTHGDAMLGERTLKHLIELEPNNSG 447
Score = 96.7 bits (239), Expect = 2e-17
Identities = 74/282 (26%), Positives = 130/282 (46%), Gaps = 5/282 (1%)
Frame = -1
Query: 1077 NSAREAIVLYKRIQIMGFRPDTYSFPFVLKAIVHLSALEIGKEIHGQVIRIGLYSDVHIL 898
N +AI +++ +Q+ PD + VL A L ALE+G+ I + GL+ +V +
Sbjct: 222 NRPHQAIAIFRTMQLQNVVPDEITLLAVLSACAQLGALELGEWIRNYIDIHGLHRNVPLH 281
Query: 897 TGLIQMYSSCGGVISDARSLFDRMPIRDVVSWNAMVAGYAKVGEVDSARELFELMPERNV 718
LI MY+ G I A +F+ M + +V+W M+AG A G
Sbjct: 282 NALIDMYAKSGN-IKRALLIFESMKHKTIVTWTTMIAGLALHG----------------- 323
Query: 717 ISWTVMIGGYSQMNQPNEAITIFRRMQVEEVEPDEITMLAALSACAHLGALELG-EWIHD 541
+G +A+ +F RM+ + V+P+EIT +A LSAC+H+G ++L + +
Sbjct: 324 ------LG--------TQALEMFSRMERDRVKPNEITFIAVLSACSHVGLVQLARSFFTN 369
Query: 540 YIDKHRIHKIVPLSNALIDMYVKSGKIEKALEVFETMKLR-SVITWTTMVAGLALHG--- 373
++ I + +ID+ ++G +++A ++ + M + W +++A HG
Sbjct: 370 MRSRYTIQPKIEHYGCMIDLLGRAGYLQEAQQLLQQMPFEPNAAIWGSLLAASYTHGDAM 429
Query: 372 LGREALEMFSRMERSRVKPNEVTFIAILSACSHVGLVDIGRW 247
LG L+ +E PN A+LS +GRW
Sbjct: 430 LGERTLKHLIELE-----PNNSGNYALLSNI----YASLGRW 462
>ref|XP_004294930.1| PREDICTED: pentatricopeptide repeat-containing protein At5g56310-like
[Fragaria vesca subsp. vesca]
Length = 518
Score = 464 bits (1194), Expect = e-128
Identities = 233/357 (65%), Positives = 278/357 (77%), Gaps = 2/357 (0%)
Frame = -1
Query: 1065 EAIVLYKRIQIMGFRPDTYSFPFVLKAIVHLSALEIGKEIHGQVIRIGLYSDVHILTGLI 886
+AI +Y IQ G RPDTYS P VLKA+V L A+ IG+++H I GL + V ++T LI
Sbjct: 73 DAISVYTSIQAAGLRPDTYSVPLVLKAVVRLGAVGIGRQVHCHSIVTGLDTHVSVVTALI 132
Query: 885 QMYSSCGGVISDARSLFDRMPIRDVVSWNAMVAGYAKVGEVDSARELFELMP--ERNVIS 712
MYSSCG V DAR LFD RDV WNAM+AGYAK+G VDSAR +FE MP NVIS
Sbjct: 133 HMYSSCGSVF-DARRLFDGAAFRDVALWNAMIAGYAKLGHVDSARHVFETMPLNNSNVIS 191
Query: 711 WTVMIGGYSQMNQPNEAITIFRRMQVEEVEPDEITMLAALSACAHLGALELGEWIHDYID 532
WT +I GY+Q+N+P EAI +FRRMQ+ V+PDEI MLAALSACA LGAL LGEWIH+YI
Sbjct: 192 WTALIAGYAQVNRPTEAIMVFRRMQLHNVQPDEIAMLAALSACAQLGALRLGEWIHNYIQ 251
Query: 531 KHRIHKIVPLSNALIDMYVKSGKIEKALEVFETMKLRSVITWTTMVAGLALHGLGREALE 352
KH ++ L+NALIDMY KSG I KAL+VF + ++VITWTTM+AGLALHGLG +AL+
Sbjct: 252 KHGFRELSSLNNALIDMYAKSGNIRKALQVFHSTNHKTVITWTTMIAGLALHGLGTQALD 311
Query: 351 MFSRMERSRVKPNEVTFIAILSACSHVGLVDIGRWYFDNMNSRYQIKPKIEHYGCMVDLL 172
MFS+MER+++ PN +TFIAILSACSH LV G YFD M SRY+I+PKI HYGCMVDLL
Sbjct: 312 MFSQMERAQIAPNHITFIAILSACSHAHLVQTGLRYFDIMVSRYRIQPKIMHYGCMVDLL 371
Query: 171 GRAGYLEEAQELVRGMPYEANGAIWGSLLAASRVHGDVVLGECALKHLIKLEPHNSG 1
GRAGYL+EAQ+LVR MP+EAN AIWGSLLAAS +HG+ LGE AL++LIKLEP NSG
Sbjct: 372 GRAGYLQEAQQLVRQMPFEANAAIWGSLLAASNIHGNDELGEHALQNLIKLEPQNSG 428
Score = 88.2 bits (217), Expect = 5e-15
Identities = 62/256 (24%), Positives = 118/256 (46%), Gaps = 5/256 (1%)
Frame = -1
Query: 1086 SQTNSAREAIVLYKRIQIMGFRPDTYSFPFVLKAIVHLSALEIGKEIHGQVIRIGLYSDV 907
+Q N EAI++++R+Q+ +PD + L A L AL +G+ IH + + G
Sbjct: 200 AQVNRPTEAIMVFRRMQLHNVQPDEIAMLAALSACAQLGALRLGEWIHNYIQKHGFRELS 259
Query: 906 HILTGLIQMYSSCGGVISDARSLFDRMPIRDVVSWNAMVAGYAKVGEVDSARELFELMPE 727
+ LI MY+ G I A +F + V++W M+AG A G
Sbjct: 260 SLNNALIDMYAKSGN-IRKALQVFHSTNHKTVITWTTMIAGLALHG-------------- 304
Query: 726 RNVISWTVMIGGYSQMNQPNEAITIFRRMQVEEVEPDEITMLAALSACAHLGALELG-EW 550
+G +A+ +F +M+ ++ P+ IT +A LSAC+H ++ G +
Sbjct: 305 ---------LG--------TQALDMFSQMERAQIAPNHITFIAILSACSHAHLVQTGLRY 347
Query: 549 IHDYIDKHRIHKIVPLSNALIDMYVKSGKIEKALEVFETMKLR-SVITWTTMVAGLALHG 373
+ ++RI + ++D+ ++G +++A ++ M + W +++A +HG
Sbjct: 348 FDIMVSRYRIQPKIMHYGCMVDLLGRAGYLQEAQQLVRQMPFEANAAIWGSLLAASNIHG 407
Query: 372 ---LGREALEMFSRME 334
LG AL+ ++E
Sbjct: 408 NDELGEHALQNLIKLE 423
Score = 85.9 bits (211), Expect = 3e-14
Identities = 66/288 (22%), Positives = 122/288 (42%), Gaps = 33/288 (11%)
Frame = -1
Query: 780 AKVGEVDSARELFELMPERNVISWTVMIGGYSQMNQPNEAITIFRRMQVEEVEPDEITML 601
+ +G A +F P+ N+ + MI P++AI+++ +Q + PD ++
Sbjct: 39 SSLGFSSYACSVFTRNPQPNINLYNTMIKALP----PSDAISVYTSIQAAGLRPDTYSVP 94
Query: 600 AALSACAHLGALELGEWIHDYIDKHRIHKIVPLSNALIDMYVKSGKIEKALEVFETMKLR 421
L A LGA+ +G +H + + V + ALI MY G + A +F+ R
Sbjct: 95 LVLKAVVRLGAVGIGRQVHCHSIVTGLDTHVSVVTALIHMYSSCGSVFDARRLFDGAAFR 154
Query: 420 SVITWTTMVAGLALHG---------------------------------LGREALEMFSR 340
V W M+AG A G EA+ +F R
Sbjct: 155 DVALWNAMIAGYAKLGHVDSARHVFETMPLNNSNVISWTALIAGYAQVNRPTEAIMVFRR 214
Query: 339 MERSRVKPNEVTFIAILSACSHVGLVDIGRWYFDNMNSRYQIKPKIEHYGCMVDLLGRAG 160
M+ V+P+E+ +A LSAC+ +G + +G W N ++ + ++D+ ++G
Sbjct: 215 MQLHNVQPDEIAMLAALSACAQLGALRLGEW-IHNYIQKHGFRELSSLNNALIDMYAKSG 273
Query: 159 YLEEAQELVRGMPYEANGAIWGSLLAASRVHGDVVLGECALKHLIKLE 16
+ +A ++ ++ W +++A +HG LG AL ++E
Sbjct: 274 NIRKALQVFHSTNHK-TVITWTTMIAGLALHG---LGTQALDMFSQME 317
>ref|XP_003556973.2| PREDICTED: pentatricopeptide repeat-containing protein At5g56310-like
[Glycine max]
Length = 580
Score = 447 bits (1151), Expect = e-123
Identities = 224/366 (61%), Positives = 284/366 (77%), Gaps = 4/366 (1%)
Frame = -1
Query: 1086 SQTNSAREAIVLYKRIQIMGFRPDTYSFPFVLKAIVHLSALEIGKEIHGQVIRIGLYSDV 907
S +N R AI L+ I+++G PD+YSFPFVLKA+V LSA+ +GK+IH Q I GL S
Sbjct: 135 SSSNPTR-AISLFNAIRLLGMPPDSYSFPFVLKAVVCLSAVHVGKQIHCQAIVSGLDSHP 193
Query: 906 HILTGLIQMYSSCGGVISDARSLFDRMPIRDVVSWNAMVAGYAKVGEVDSARELFELMPE 727
++T L+QMYSSC +S AR LFD + WNAM+AGYAKVG + +AR LFE MPE
Sbjct: 194 SVVTSLVQMYSSCAH-LSSARKLFDGATFKHAPLWNAMLAGYAKVGNMSNARNLFECMPE 252
Query: 726 --RNVISWTVMIGGYSQMNQPNEAITIFRRMQVEEVEPDEITMLAALSACAHLGALELGE 553
R+V+SWT +I GY+Q + PNEAIT+FR M ++ V+PDEI +LA LSACA LGAL+LGE
Sbjct: 253 KDRDVVSWTTLISGYTQTHSPNEAITLFRIMLLQNVQPDEIAILAVLSACADLGALQLGE 312
Query: 552 WIHDYIDKH--RIHKIVPLSNALIDMYVKSGKIEKALEVFETMKLRSVITWTTMVAGLAL 379
WIH+YI+KH ++ K VPL N+LIDMY KSG I KA ++F+ MK +++ITWTT+++GLAL
Sbjct: 313 WIHNYIEKHNNKLRKTVPLCNSLIDMYAKSGDISKARQLFQNMKHKTIITWTTVISGLAL 372
Query: 378 HGLGREALEMFSRMERSRVKPNEVTFIAILSACSHVGLVDIGRWYFDNMNSRYQIKPKIE 199
HG G+EAL++FS ME++RVKPNEVT IA+LSACSHVGLV++GR F +M S+Y I+PKIE
Sbjct: 373 HGFGKEALDVFSCMEKARVKPNEVTLIAVLSACSHVGLVELGRNIFTSMRSKYGIEPKIE 432
Query: 198 HYGCMVDLLGRAGYLEEAQELVRGMPYEANGAIWGSLLAASRVHGDVVLGECALKHLIKL 19
HYGCM+DLLGRAGYL+EA ELVR MP EAN A+WGSLL+AS +GD L AL+HL L
Sbjct: 433 HYGCMIDLLGRAGYLQEAMELVRVMPSEANAAVWGSLLSASNRYGDAALAAEALRHLSVL 492
Query: 18 EPHNSG 1
EPHN G
Sbjct: 493 EPHNCG 498
>ref|XP_007153011.1| hypothetical protein PHAVU_003G000200g [Phaseolus vulgaris]
gi|561026365|gb|ESW25005.1| hypothetical protein
PHAVU_003G000200g [Phaseolus vulgaris]
Length = 555
Score = 443 bits (1140), Expect = e-122
Identities = 219/362 (60%), Positives = 279/362 (77%), Gaps = 2/362 (0%)
Frame = -1
Query: 1080 TNSAREAIVLYKRIQIMGFRPDTYSFPFVLKAIVHLSALEIGKEIHGQVIRIGLYSDVHI 901
+++ AI L+ I+++G RPD+YSFPF LKA+V S L +G +IH Q I G + ++
Sbjct: 111 SHNPTRAISLFNAIRLLGLRPDSYSFPFALKAVVSSSFLHVGHQIHSQAILSGFITHPNV 170
Query: 900 LTGLIQMYSSCGGVISDARSLFDRMPIRDVVSWNAMVAGYAKVGEVDSARELFELMPE-- 727
LT LI MYSSC V S AR LFD + V WNAM+AGYAKVG++ +AR LFE MPE
Sbjct: 171 LTSLIHMYSSCANV-SSARKLFDAATFQHVSLWNAMLAGYAKVGDLSNARNLFETMPEKD 229
Query: 726 RNVISWTVMIGGYSQMNQPNEAITIFRRMQVEEVEPDEITMLAALSACAHLGALELGEWI 547
R+V+SWT +I GY++ + P++AIT+FR M V V+PD+I +LAALSACA LGALELG WI
Sbjct: 230 RDVVSWTCLISGYTRTHCPHQAITLFRTMLVHNVQPDKIAILAALSACADLGALELGVWI 289
Query: 546 HDYIDKHRIHKIVPLSNALIDMYVKSGKIEKALEVFETMKLRSVITWTTMVAGLALHGLG 367
H YI++H++ +IV L N+LIDMY KSG I KA +VFE M+ ++++TWTTM+ GLALHG+G
Sbjct: 290 HSYIERHKLPEIVSLCNSLIDMYAKSGDIGKARQVFEGMERKTIVTWTTMIGGLALHGMG 349
Query: 366 REALEMFSRMERSRVKPNEVTFIAILSACSHVGLVDIGRWYFDNMNSRYQIKPKIEHYGC 187
+EALE+FS ME++ VKPNEVTFI ILSACSHVGLV++GR YF M R+ I+PKIEHYGC
Sbjct: 350 KEALELFSCMEKAGVKPNEVTFITILSACSHVGLVELGRHYFTCMRKRFGIEPKIEHYGC 409
Query: 186 MVDLLGRAGYLEEAQELVRGMPYEANGAIWGSLLAASRVHGDVVLGECALKHLIKLEPHN 7
MVDLLGR GYLEEA+ELVR MP EAN A+WGSLL+AS +GDV L + AL+HL +EPHN
Sbjct: 410 MVDLLGRGGYLEEAKELVRLMPCEANAAVWGSLLSASNRYGDVALAKEALRHLSVMEPHN 469
Query: 6 SG 1
G
Sbjct: 470 CG 471
Score = 90.1 bits (222), Expect = 1e-15
Identities = 68/256 (26%), Positives = 114/256 (44%), Gaps = 5/256 (1%)
Frame = -1
Query: 1086 SQTNSAREAIVLYKRIQIMGFRPDTYSFPFVLKAIVHLSALEIGKEIHGQVIRIGLYSDV 907
++T+ +AI L++ + + +PD + L A L ALE+G IH + R L V
Sbjct: 243 TRTHCPHQAITLFRTMLVHNVQPDKIAILAALSACADLGALELGVWIHSYIERHKLPEIV 302
Query: 906 HILTGLIQMYSSCGGVISDARSLFDRMPIRDVVSWNAMVAGYAKVGEVDSARELFELMPE 727
+ LI MY+ G I AR +F+ M + +V+W M+ G A G
Sbjct: 303 SLCNSLIDMYAKSGD-IGKARQVFEGMERKTIVTWTTMIGGLALHG-------------- 347
Query: 726 RNVISWTVMIGGYSQMNQPNEAITIFRRMQVEEVEPDEITMLAALSACAHLGALELGEWI 547
EA+ +F M+ V+P+E+T + LSAC+H+G +ELG
Sbjct: 348 -----------------MGKEALELFSCMEKAGVKPNEVTFITILSACSHVGLVELGRHY 390
Query: 546 HDYIDKH-RIHKIVPLSNALIDMYVKSGKIEKALEVFETMKLR-SVITWTTMVAGLALHG 373
+ K I + ++D+ + G +E+A E+ M + W ++++ +G
Sbjct: 391 FTCMRKRFGIEPKIEHYGCMVDLLGRGGYLEEAKELVRLMPCEANAAVWGSLLSASNRYG 450
Query: 372 ---LGREALEMFSRME 334
L +EAL S ME
Sbjct: 451 DVALAKEALRHLSVME 466
>ref|XP_007014654.1| Pentatricopeptide repeat (PPR) superfamily protein, putative isoform
1 [Theobroma cacao] gi|590582550|ref|XP_007014655.1|
Pentatricopeptide repeat (PPR) superfamily protein,
putative isoform 1 [Theobroma cacao]
gi|508785017|gb|EOY32273.1| Pentatricopeptide repeat
(PPR) superfamily protein, putative isoform 1 [Theobroma
cacao] gi|508785018|gb|EOY32274.1| Pentatricopeptide
repeat (PPR) superfamily protein, putative isoform 1
[Theobroma cacao]
Length = 540
Score = 436 bits (1122), Expect = e-120
Identities = 216/373 (57%), Positives = 284/373 (76%), Gaps = 13/373 (3%)
Frame = -1
Query: 1080 TNSAREAIVLYKRIQIMGFRPDTYSFPFVLKAIVHLSALEIGKEIHGQVIRIGLYSDVHI 901
++SA EA+ +YK I RPD+YSFPF LKA+V L AL G +IH Q + GL +++++
Sbjct: 79 SHSAFEALHVYKSIARAKLRPDSYSFPFALKAVVDLQALRFGTQIHSQTVCAGLNANIYV 138
Query: 900 LTGLIQMYSSCGGVISDARSLFDRMP-----IRDVVSWNAMVAGYAKVGEVDSARELFEL 736
T LIQMYSSC +SDAR LFD++ I+DV W+A +AGYAKVG+ D+A +L E
Sbjct: 139 ATALIQMYSSCA-CVSDARKLFDQLTSVSRSIQDVALWSATIAGYAKVGDPDAAWDLLER 197
Query: 735 MPERN------VISWTVMIGGYSQMNQPNEAITIFRRMQVEEVEPDEITMLAALSACAHL 574
MP+ ++ WT +I GY+QM++PNEAI +FRRMQ+E V+PDEI MLA L+ACAHL
Sbjct: 198 MPQTQTNAEAVMVCWTTVIAGYAQMDRPNEAIAVFRRMQLENVKPDEIAMLAVLTACAHL 257
Query: 573 GALE--LGEWIHDYIDKHRIHKIVPLSNALIDMYVKSGKIEKALEVFETMKLRSVITWTT 400
GA++ LGE IH YI KH ++++PL NALI+MY KSG I KAL+VFE M ++VITWTT
Sbjct: 258 GAIQFLLGECIHGYIHKHGFNQMIPLKNALIEMYAKSGDICKALQVFENMNHKTVITWTT 317
Query: 399 MVAGLALHGLGREALEMFSRMERSRVKPNEVTFIAILSACSHVGLVDIGRWYFDNMNSRY 220
+++ LA HGLG AL+MFSRMER++V+PN++TF+A+LSAC+H GLVD+G +F+ M+SRY
Sbjct: 318 IISALAFHGLGTLALQMFSRMERAQVQPNDITFLAVLSACTHAGLVDLGGCFFNTMSSRY 377
Query: 219 QIKPKIEHYGCMVDLLGRAGYLEEAQELVRGMPYEANGAIWGSLLAASRVHGDVVLGECA 40
I+PKI+HYGCM+DLLGRAGYL EA ELV MP++ N AIWGSLLAAS +H + LGE A
Sbjct: 378 GIQPKIQHYGCMIDLLGRAGYLREALELVSRMPFKPNAAIWGSLLAASNIHANAELGELA 437
Query: 39 LKHLIKLEPHNSG 1
L HL++LEP NSG
Sbjct: 438 LLHLVELEPWNSG 450
Score = 90.1 bits (222), Expect = 1e-15
Identities = 66/251 (26%), Positives = 121/251 (48%), Gaps = 7/251 (2%)
Frame = -1
Query: 1086 SQTNSAREAIVLYKRIQIMGFRPDTYSFPFVLKAIVHLSALE--IGKEIHGQVIRIGLYS 913
+Q + EAI +++R+Q+ +PD + VL A HL A++ +G+ IHG + + G
Sbjct: 220 AQMDRPNEAIAVFRRMQLENVKPDEIAMLAVLTACAHLGAIQFLLGECIHGYIHKHGFNQ 279
Query: 912 DVHILTGLIQMYSSCGGVISDARSLFDRMPIRDVVSWNAMVAGYAKVGEVDSARELFELM 733
+ + LI+MY+ G I A +F+ M + V++W +++ A G
Sbjct: 280 MIPLKNALIEMYAKSGD-ICKALQVFENMNHKTVITWTTIISALAFHG------------ 326
Query: 732 PERNVISWTVMIGGYSQMNQPNEAITIFRRMQVEEVEPDEITMLAALSACAHLGALELGE 553
+G A+ +F RM+ +V+P++IT LA LSAC H G ++LG
Sbjct: 327 -----------LG--------TLALQMFSRMERAQVQPNDITFLAVLSACTHAGLVDLGG 367
Query: 552 -WIHDYIDKHRIHKIVPLSNALIDMYVKSGKIEKALEVFETMKLR-SVITWTTMVAGLAL 379
+ + ++ I + +ID+ ++G + +ALE+ M + + W +++A +
Sbjct: 368 CFFNTMSSRYGIQPKIQHYGCMIDLLGRAGYLREALELVSRMPFKPNAAIWGSLLAASNI 427
Query: 378 HG---LGREAL 355
H LG AL
Sbjct: 428 HANAELGELAL 438
>ref|XP_002864446.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297310281|gb|EFH40705.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 531
Score = 434 bits (1116), Expect = e-119
Identities = 211/363 (58%), Positives = 278/363 (76%), Gaps = 2/363 (0%)
Frame = -1
Query: 1083 QTNSAREAIVLYKRIQIMGFRPDTYSFPFVLKAIVHLSALEIGKEIHGQVIRIGLYSDVH 904
+ N+ AI +Y++ +PDT++FPFVLK +V +S + G+++HGQ + G S VH
Sbjct: 93 ERNAHSIAITVYRKFWAFCAKPDTFTFPFVLKIVVRVSDVWFGRQVHGQAVVFGFDSSVH 152
Query: 903 ILTGLIQMYSSCGGVISDARSLFDRMPIRDVVSWNAMVAGYAKVGEVDSARELFELMP-- 730
++TGLIQMYSSCGG + DAR +FD M +RDV WNA++AGY KVGE+D AR L E+MP
Sbjct: 153 VVTGLIQMYSSCGG-LGDARKVFDEMRVRDVNVWNALLAGYGKVGEMDEARGLLEMMPCW 211
Query: 729 ERNVISWTVMIGGYSQMNQPNEAITIFRRMQVEEVEPDEITMLAALSACAHLGALELGEW 550
RN +SWT +I GY++ + +EAI +F+RM +E V+PDE+T+LA LSACA LG+LELGE
Sbjct: 212 VRNAVSWTCVISGYARSGRASEAIEVFQRMLMENVDPDEVTLLAVLSACADLGSLELGER 271
Query: 549 IHDYIDKHRIHKIVPLSNALIDMYVKSGKIEKALEVFETMKLRSVITWTTMVAGLALHGL 370
I Y+D +++ V L+NA+IDMY KSG I KALEVFE++ R+V+TWTT++ GLA HG
Sbjct: 272 ICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALEVFESVNERNVVTWTTIITGLATHGH 331
Query: 369 GREALEMFSRMERSRVKPNEVTFIAILSACSHVGLVDIGRWYFDNMNSRYQIKPKIEHYG 190
G EAL MF RM ++ VKPN+VTFIAILSACSHVG VD+G +F++M S+Y I P IEHYG
Sbjct: 332 GAEALVMFDRMVKAGVKPNDVTFIAILSACSHVGWVDLGNRFFNSMRSKYGINPNIEHYG 391
Query: 189 CMVDLLGRAGYLEEAQELVRGMPYEANGAIWGSLLAASRVHGDVVLGECALKHLIKLEPH 10
CM+DLLGRAG L EA+E+++ MP+E+N AIWGSLLAAS VH D+ +GE AL LIKLEP+
Sbjct: 392 CMIDLLGRAGKLREAEEVIKSMPFESNAAIWGSLLAASNVHHDIDVGERALYQLIKLEPN 451
Query: 9 NSG 1
NSG
Sbjct: 452 NSG 454
Score = 92.0 bits (227), Expect = 4e-16
Identities = 72/284 (25%), Positives = 134/284 (47%), Gaps = 5/284 (1%)
Frame = -1
Query: 1086 SQTNSAREAIVLYKRIQIMGFRPDTYSFPFVLKAIVHLSALEIGKEIHGQVIRIGLYSDV 907
+++ A EAI +++R+ + PD + VL A L +LE+G+ I V G+ V
Sbjct: 226 ARSGRASEAIEVFQRMLMENVDPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAV 285
Query: 906 HILTGLIQMYSSCGGVISDARSLFDRMPIRDVVSWNAMVAGYAKVGEVDSARELFELMPE 727
+ +I MY+ G I+ A +F+ + R+VV+W ++ G A G
Sbjct: 286 SLNNAVIDMYAKSGN-ITKALEVFESVNERNVVTWTTIITGLATHG-------------- 330
Query: 726 RNVISWTVMIGGYSQMNQPNEAITIFRRMQVEEVEPDEITMLAALSACAHLGALELG-EW 550
EA+ +F RM V+P+++T +A LSAC+H+G ++LG +
Sbjct: 331 -----------------HGAEALVMFDRMVKAGVKPNDVTFIAILSACSHVGWVDLGNRF 373
Query: 549 IHDYIDKHRIHKIVPLSNALIDMYVKSGKIEKALEVFETMKLRS-VITWTTMVAGLALH- 376
+ K+ I+ + +ID+ ++GK+ +A EV ++M S W +++A +H
Sbjct: 374 FNSMRSKYGINPNIEHYGCMIDLLGRAGKLREAEEVIKSMPFESNAAIWGSLLAASNVHH 433
Query: 375 --GLGREALEMFSRMERSRVKPNEVTFIAILSACSHVGLVDIGR 250
+G AL ++E + N ++ + + S++G D R
Sbjct: 434 DIDVGERALYQLIKLEPN----NSGNYMLLANLYSNLGRWDESR 473
>ref|NP_200442.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171630|sp|Q9FMA1.1|PP433_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g56310 gi|10177829|dbj|BAB11258.1| unnamed protein
product [Arabidopsis thaliana]
gi|332009364|gb|AED96747.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 530
Score = 432 bits (1111), Expect = e-118
Identities = 212/363 (58%), Positives = 279/363 (76%), Gaps = 2/363 (0%)
Frame = -1
Query: 1083 QTNSAREAIVLYKRIQIMGFRPDTYSFPFVLKAIVHLSALEIGKEIHGQVIRIGLYSDVH 904
+ N+ AI +Y+++ + +PDT++FPFVLK V +S + G++IHGQV+ G S VH
Sbjct: 93 EPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVH 152
Query: 903 ILTGLIQMYSSCGGVISDARSLFDRMPIRDVVSWNAMVAGYAKVGEVDSARELFELMP-- 730
++TGLIQMY SCGG + DAR +FD M ++DV WNA++AGY KVGE+D AR L E+MP
Sbjct: 153 VVTGLIQMYFSCGG-LGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCW 211
Query: 729 ERNVISWTVMIGGYSQMNQPNEAITIFRRMQVEEVEPDEITMLAALSACAHLGALELGEW 550
RN +SWT +I GY++ + +EAI +F+RM +E VEPDE+T+LA LSACA LG+LELGE
Sbjct: 212 VRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGER 271
Query: 549 IHDYIDKHRIHKIVPLSNALIDMYVKSGKIEKALEVFETMKLRSVITWTTMVAGLALHGL 370
I Y+D +++ V L+NA+IDMY KSG I KAL+VFE + R+V+TWTT++AGLA HG
Sbjct: 272 ICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGH 331
Query: 369 GREALEMFSRMERSRVKPNEVTFIAILSACSHVGLVDIGRWYFDNMNSRYQIKPKIEHYG 190
G EAL MF+RM ++ V+PN+VTFIAILSACSHVG VD+G+ F++M S+Y I P IEHYG
Sbjct: 332 GAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYG 391
Query: 189 CMVDLLGRAGYLEEAQELVRGMPYEANGAIWGSLLAASRVHGDVVLGECALKHLIKLEPH 10
CM+DLLGRAG L EA E+++ MP++AN AIWGSLLAAS VH D+ LGE AL LIKLEP+
Sbjct: 392 CMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPN 451
Query: 9 NSG 1
NSG
Sbjct: 452 NSG 454
Score = 97.1 bits (240), Expect = 1e-17
Identities = 74/284 (26%), Positives = 137/284 (48%), Gaps = 5/284 (1%)
Frame = -1
Query: 1086 SQTNSAREAIVLYKRIQIMGFRPDTYSFPFVLKAIVHLSALEIGKEIHGQVIRIGLYSDV 907
+++ A EAI +++R+ + PD + VL A L +LE+G+ I V G+ V
Sbjct: 226 AKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAV 285
Query: 906 HILTGLIQMYSSCGGVISDARSLFDRMPIRDVVSWNAMVAGYAKVGEVDSARELFELMPE 727
+ +I MY+ G I+ A +F+ + R+VV+W ++AG A G
Sbjct: 286 SLNNAVIDMYAKSGN-ITKALDVFECVNERNVVTWTTIIAGLATHG-------------- 330
Query: 726 RNVISWTVMIGGYSQMNQPNEAITIFRRMQVEEVEPDEITMLAALSACAHLGALELGEWI 547
EA+ +F RM V P+++T +A LSAC+H+G ++LG+ +
Sbjct: 331 -----------------HGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRL 373
Query: 546 HDYI-DKHRIHKIVPLSNALIDMYVKSGKIEKALEVFETMKLR-SVITWTTMVAGLALH- 376
+ + K+ IH + +ID+ ++GK+ +A EV ++M + + W +++A +H
Sbjct: 374 FNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHH 433
Query: 375 --GLGREALEMFSRMERSRVKPNEVTFIAILSACSHVGLVDIGR 250
LG AL ++E + N ++ + + S++G D R
Sbjct: 434 DLELGERALSELIKLEPN----NSGNYMLLANLYSNLGRWDESR 473
>ref|XP_006280289.1| hypothetical protein CARUB_v10026213mg [Capsella rubella]
gi|482548993|gb|EOA13187.1| hypothetical protein
CARUB_v10026213mg [Capsella rubella]
Length = 532
Score = 428 bits (1101), Expect = e-117
Identities = 212/363 (58%), Positives = 277/363 (76%), Gaps = 2/363 (0%)
Frame = -1
Query: 1083 QTNSAREAIVLYKRIQIMGFRPDTYSFPFVLKAIVHLSALEIGKEIHGQVIRIGLYSDVH 904
+ N+ A+ +Y++ + +PDT++FPFVLK V +S + G++IHGQ + GL S VH
Sbjct: 94 EPNANSFAVSVYRKFWALCCKPDTFTFPFVLKIAVRVSDVCFGRQIHGQTVVFGLDSSVH 153
Query: 903 ILTGLIQMYSSCGGVISDARSLFDRMPIRDVVSWNAMVAGYAKVGEVDSARELFELMP-- 730
++TG+IQMYSSCGG + DAR +FD +RDV WNA++AGY KVGE+D AR L ++MP
Sbjct: 154 VVTGIIQMYSSCGG-LGDARKVFDETRVRDVNVWNALLAGYGKVGEMDEARVLLDMMPCW 212
Query: 729 ERNVISWTVMIGGYSQMNQPNEAITIFRRMQVEEVEPDEITMLAALSACAHLGALELGEW 550
RNV+SWT +I GY++ +P+EAI +F+RM +E VEPDE+T+LAALSACA L +LELGE
Sbjct: 213 IRNVVSWTCVISGYAKSRRPSEAIEVFQRMLMENVEPDEVTLLAALSACADLVSLELGER 272
Query: 549 IHDYIDKHRIHKIVPLSNALIDMYVKSGKIEKALEVFETMKLRSVITWTTMVAGLALHGL 370
I Y+D + + V L+NA+IDMY KSG I KALEVFE + R+V+TWTT++ GLA HG
Sbjct: 273 ICSYVDHRGMERAVSLNNAVIDMYAKSGNITKALEVFERVNERNVVTWTTIITGLATHGH 332
Query: 369 GREALEMFSRMERSRVKPNEVTFIAILSACSHVGLVDIGRWYFDNMNSRYQIKPKIEHYG 190
G EAL MF+RM ++ VKPN+VTFIAILSACSHVG V +G+ F +M S+Y ++P IEHYG
Sbjct: 333 GTEALAMFNRMVKAGVKPNDVTFIAILSACSHVGWVYLGKRLFSSMISKYGMQPNIEHYG 392
Query: 189 CMVDLLGRAGYLEEAQELVRGMPYEANGAIWGSLLAASRVHGDVVLGECALKHLIKLEPH 10
CM+DLLGRAG L EA+E ++ MP+EAN AIWGSLLAAS VH D+ LGE AL LIKLEP+
Sbjct: 393 CMIDLLGRAGLLREAEEAIKSMPFEANAAIWGSLLAASNVHHDLELGERALNQLIKLEPN 452
Query: 9 NSG 1
NSG
Sbjct: 453 NSG 455
>ref|XP_006358733.1| PREDICTED: pentatricopeptide repeat-containing protein At5g56310-like
isoform X1 [Solanum tuberosum]
gi|565385767|ref|XP_006358734.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g56310-like isoform X2 [Solanum tuberosum]
Length = 508
Score = 420 bits (1079), Expect = e-115
Identities = 208/363 (57%), Positives = 273/363 (75%), Gaps = 2/363 (0%)
Frame = -1
Query: 1083 QTNSAREAIVLYKRIQIMGFRPDTYSFPFVLKAIVHLSALEIGKEIHGQVIRIGLYSDVH 904
Q + + +AI LYK+ + +G DTYS PFVL A+ + L ++IH + I GL +DVH
Sbjct: 54 QRHLSMDAICLYKQARAIGLYHDTYSIPFVLNAV---TCLTTSRQIHCEAILTGLNNDVH 110
Query: 903 ILTGLIQMYSSCGGVISDARSLFDRMPIRDVVSWNAMVAGYAKVGEVDSARELFELMPER 724
+ T L++MYSS G ISDAR +FD M +DV WNAM+AGY K ++D+A+ LF+ M E+
Sbjct: 111 VATSLVRMYSSFG-CISDARKVFDEMRNKDVGLWNAMIAGYVKAHDMDTAKYLFDNMLEK 169
Query: 723 NVISWTVMIGGYSQMNQPNEAITIFRRMQVEEV--EPDEITMLAALSACAHLGALELGEW 550
NV+SWT +I GY+Q NQ ++AI +FR+M EV +PDE+TMLAALSACAHLG ELGEW
Sbjct: 170 NVVSWTTIIAGYAQGNQFSQAIGVFRKMMSVEVSAKPDEVTMLAALSACAHLGEHELGEW 229
Query: 549 IHDYIDKHRIHKIVPLSNALIDMYVKSGKIEKALEVFETMKLRSVITWTTMVAGLALHGL 370
IH YI KHR+H+ V L+N LIDMY KSG ++KA+E+FE+M+ RSV+TW+T+++ LA++G
Sbjct: 230 IHSYIIKHRLHRSVSLNNTLIDMYAKSGNVKKAVELFESMETRSVVTWSTVISALAVNGY 289
Query: 369 GREALEMFSRMERSRVKPNEVTFIAILSACSHVGLVDIGRWYFDNMNSRYQIKPKIEHYG 190
GREA+ MF R+E ++PN VTFIA+LSACSH GLV+ GR YF M ++ I P I HYG
Sbjct: 290 GREAINMFPRLEMVGIRPNSVTFIALLSACSHAGLVEEGRLYFKTMEEKHGISPDIRHYG 349
Query: 189 CMVDLLGRAGYLEEAQELVRGMPYEANGAIWGSLLAASRVHGDVVLGECALKHLIKLEPH 10
CMVDL GRAGYL+EA +V+ MP+EAN AIWGSLLAA+R G V LGE AL+HL ++EPH
Sbjct: 350 CMVDLFGRAGYLDEAANMVKMMPFEANAAIWGSLLAAARNQGHVELGEQALQHLTEVEPH 409
Query: 9 NSG 1
NSG
Sbjct: 410 NSG 412
>ref|XP_002455392.1| hypothetical protein SORBIDRAFT_03g010050 [Sorghum bicolor]
gi|241927367|gb|EES00512.1| hypothetical protein
SORBIDRAFT_03g010050 [Sorghum bicolor]
Length = 506
Score = 419 bits (1077), Expect = e-114
Identities = 195/321 (60%), Positives = 258/321 (80%), Gaps = 1/321 (0%)
Frame = -1
Query: 960 IGKEIHGQVIRIG-LYSDVHILTGLIQMYSSCGGVISDARSLFDRMPIRDVVSWNAMVAG 784
+G ++H ++R G + SD H+ L+Q+Y +C V +DARS+F M +RDVV+WN M+AG
Sbjct: 96 LGPQLHSLLLRTGHVASDTHVSASLVQLYCTCRHV-ADARSVFHEMAVRDVVAWNVMIAG 154
Query: 783 YAKVGEVDSARELFELMPERNVISWTVMIGGYSQMNQPNEAITIFRRMQVEEVEPDEITM 604
Y K G++ ARELF+ MPERNV+SWT +IGGY+QM +P EA+ +FRRMQVE +EPD + +
Sbjct: 155 YVKAGDLAHARELFDAMPERNVVSWTTVIGGYAQMRRPEEAVEVFRRMQVEGIEPDGVAL 214
Query: 603 LAALSACAHLGALELGEWIHDYIDKHRIHKIVPLSNALIDMYVKSGKIEKALEVFETMKL 424
L+ LSAC LGA++LGEW+H ++ + + + +PL N++IDMY+K G IEKA+EVFE M+
Sbjct: 215 LSVLSACGDLGAVDLGEWVHRFVVRRGLRQEIPLMNSIIDMYMKCGCIEKAVEVFEGMEE 274
Query: 423 RSVITWTTMVAGLALHGLGREALEMFSRMERSRVKPNEVTFIAILSACSHVGLVDIGRWY 244
+SV+TWTT++AG ALHGLG +A+EMF RMER + PN+VTF+AILSACSHVGL D+GRWY
Sbjct: 275 KSVVTWTTLIAGFALHGLGLQAVEMFRRMERENMAPNDVTFLAILSACSHVGLTDLGRWY 334
Query: 243 FDNMNSRYQIKPKIEHYGCMVDLLGRAGYLEEAQELVRGMPYEANGAIWGSLLAASRVHG 64
F+ M S+Y+IKP++EHYGCMVDLLGRAG L+EAQ+LV+ MP +AN AIWG+LLAASR HG
Sbjct: 335 FNIMVSQYRIKPQVEHYGCMVDLLGRAGCLKEAQDLVKDMPLKANAAIWGALLAASRTHG 394
Query: 63 DVVLGECALKHLIKLEPHNSG 1
D LGE AL HLI+LEP NSG
Sbjct: 395 DADLGEEALVHLIELEPSNSG 415
Score = 117 bits (294), Expect = 6e-24
Identities = 74/258 (28%), Positives = 132/258 (51%), Gaps = 5/258 (1%)
Frame = -1
Query: 1086 SQTNSAREAIVLYKRIQIMGFRPDTYSFPFVLKAIVHLSALEIGKEIHGQVIRIGLYSDV 907
+Q EA+ +++R+Q+ G PD + VL A L A+++G+ +H V+R GL ++
Sbjct: 187 AQMRRPEEAVEVFRRMQVEGIEPDGVALLSVLSACGDLGAVDLGEWVHRFVVRRGLRQEI 246
Query: 906 HILTGLIQMYSSCGGVISDARSLFDRMPIRDVVSWNAMVAGYAKVGEVDSARELFELMPE 727
++ +I MY C G I A +F+ M + VV+W ++AG+A G
Sbjct: 247 PLMNSIIDMYMKC-GCIEKAVEVFEGMEEKSVVTWTTLIAGFALHG-------------- 291
Query: 726 RNVISWTVMIGGYSQMNQPNEAITIFRRMQVEEVEPDEITMLAALSACAHLGALELGEWI 547
+G +A+ +FRRM+ E + P+++T LA LSAC+H+G +LG W
Sbjct: 292 ---------LG--------LQAVEMFRRMERENMAPNDVTFLAILSACSHVGLTDLGRWY 334
Query: 546 HD-YIDKHRIHKIVPLSNALIDMYVKSGKIEKALEVFETMKLR-SVITWTTMVAGLALHG 373
+ + ++RI V ++D+ ++G +++A ++ + M L+ + W ++A HG
Sbjct: 335 FNIMVSQYRIKPQVEHYGCMVDLLGRAGCLKEAQDLVKDMPLKANAAIWGALLAASRTHG 394
Query: 372 ---LGREALEMFSRMERS 328
LG EAL +E S
Sbjct: 395 DADLGEEALVHLIELEPS 412
>ref|XP_003589826.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478874|gb|AES60077.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 526
Score = 418 bits (1075), Expect = e-114
Identities = 219/363 (60%), Positives = 278/363 (76%), Gaps = 3/363 (0%)
Frame = -1
Query: 1080 TNSAREAIVLYKRIQIMGFRPDTYSFPFVLKAIVHLSALEIGKEIHGQVIRIGLYSDVHI 901
+++A+ A+ +++ ++ +G D+YS P+VLK++V L+ +GK+IH + GL +V +
Sbjct: 90 SSNAKLAVSIFRSVRRLGLSFDSYSLPYVLKSVVCLNDFGLGKQIHCVGVVTGLDKNVSV 149
Query: 900 LTGLIQMYSSCGGVISDARSLFDRMPIRDVVSWNAMVAGYAKVGEVDSARELFELMPERN 721
+ LIQMYS C V S AR LFD V NAM+ Y KVG+V +AR+LF+ M ER+
Sbjct: 150 CSSLIQMYS-CYDVCS-ARKLFDEFGGNGCVL-NAMIVAYVKVGDVSNARKLFDSMLERD 206
Query: 720 --VISWTVMIGGYSQMNQPNEAITIFRRMQVEEVEPDEITMLAALSACAHLGALELGEWI 547
V SWT MI GY+Q + PNEAI +FRRMQ+E V+PDEI +LA LSACA LGAL LGEWI
Sbjct: 207 KDVFSWTAMISGYTQAHNPNEAIKLFRRMQLENVKPDEIAILAVLSACADLGALHLGEWI 266
Query: 546 HDYIDKHRIHKIVPLSNALIDMYVKSGKIEKALEVFETMKLRSVITWTTMVAGLALHGLG 367
H+YI+KH++ KIVPL N+LIDMY KSG I KALE+FE MK +++ITWTTM+AGLALHGLG
Sbjct: 267 HNYIEKHKLSKIVPLYNSLIDMYAKSGNIRKALELFENMKHKTIITWTTMIAGLALHGLG 326
Query: 366 REALEMFSRMER-SRVKPNEVTFIAILSACSHVGLVDIGRWYFDNMNSRYQIKPKIEHYG 190
+EAL +FS ME+ RVKPNEVTFIAILSACSHVGLV++GR YF +M SRY I+PKIEHYG
Sbjct: 327 KEALRVFSCMEKEDRVKPNEVTFIAILSACSHVGLVELGRDYFTSMRSRYGIEPKIEHYG 386
Query: 189 CMVDLLGRAGYLEEAQELVRGMPYEANGAIWGSLLAASRVHGDVVLGECALKHLIKLEPH 10
CM+DLLGRAG+L+EA+E+V MP+EAN AIWGSLLAAS GD L E AL+HL LEP
Sbjct: 387 CMIDLLGRAGHLQEAKEMVLRMPFEANAAIWGSLLAASTRCGDAELAEEALRHLTVLEPG 446
Query: 9 NSG 1
+ G
Sbjct: 447 HCG 449
Score = 94.4 bits (233), Expect = 8e-17
Identities = 71/257 (27%), Positives = 123/257 (47%), Gaps = 6/257 (2%)
Frame = -1
Query: 1086 SQTNSAREAIVLYKRIQIMGFRPDTYSFPFVLKAIVHLSALEIGKEIHGQVIRIGLYSDV 907
+Q ++ EAI L++R+Q+ +PD + VL A L AL +G+ IH + + L V
Sbjct: 220 TQAHNPNEAIKLFRRMQLENVKPDEIAILAVLSACADLGALHLGEWIHNYIEKHKLSKIV 279
Query: 906 HILTGLIQMYSSCGGVISDARSLFDRMPIRDVVSWNAMVAGYAKVGEVDSARELFELMPE 727
+ LI MY+ G I A LF+ M + +++W M+AG A G
Sbjct: 280 PLYNSLIDMYAKSGN-IRKALELFENMKHKTIITWTTMIAGLALHG-------------- 324
Query: 726 RNVISWTVMIGGYSQMNQPNEAITIFRRMQVEE-VEPDEITMLAALSACAHLGALELG-E 553
+G EA+ +F M+ E+ V+P+E+T +A LSAC+H+G +ELG +
Sbjct: 325 ---------LG--------KEALRVFSCMEKEDRVKPNEVTFIAILSACSHVGLVELGRD 367
Query: 552 WIHDYIDKHRIHKIVPLSNALIDMYVKSGKIEKALEVFETMKLR-SVITWTTMVAGLALH 376
+ ++ I + +ID+ ++G +++A E+ M + W +++A
Sbjct: 368 YFTSMRSRYGIEPKIEHYGCMIDLLGRAGHLQEAKEMVLRMPFEANAAIWGSLLAASTRC 427
Query: 375 G---LGREALEMFSRME 334
G L EAL + +E
Sbjct: 428 GDAELAEEALRHLTVLE 444
>ref|XP_006344590.1| PREDICTED: pentatricopeptide repeat-containing protein At5g56310-like
isoform X1 [Solanum tuberosum]
gi|565355429|ref|XP_006344591.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g56310-like isoform X2 [Solanum tuberosum]
Length = 508
Score = 417 bits (1072), Expect = e-114
Identities = 209/363 (57%), Positives = 271/363 (74%), Gaps = 2/363 (0%)
Frame = -1
Query: 1083 QTNSAREAIVLYKRIQIMGFRPDTYSFPFVLKAIVHLSALEIGKEIHGQVIRIGLYSDVH 904
Q + +++AI LYK+ + +G DTYS PFVL A L ++IH + I GL +DVH
Sbjct: 54 QQHLSKDAICLYKQARAIGLYHDTYSIPFVLNAETRLIT---SRQIHCEAILTGLNNDVH 110
Query: 903 ILTGLIQMYSSCGGVISDARSLFDRMPIRDVVSWNAMVAGYAKVGEVDSARELFELMPER 724
+ T L++MYSS G ISDAR +FD M +DV WNAM+ GY K ++D+A+ LF+ M E+
Sbjct: 111 VATSLVRMYSSFG-CISDARKVFDEMRNKDVGWWNAMIVGYVKAHDMDTAKCLFDNMLEK 169
Query: 723 NVISWTVMIGGYSQMNQPNEAITIFRRMQVEEV--EPDEITMLAALSACAHLGALELGEW 550
NV+SWT +I GY+Q NQ ++AI +FR+M EV +PDE+TMLAALSACAHLG ELGEW
Sbjct: 170 NVVSWTAIIAGYAQGNQFSQAIGVFRKMMSVEVSAKPDEVTMLAALSACAHLGEHELGEW 229
Query: 549 IHDYIDKHRIHKIVPLSNALIDMYVKSGKIEKALEVFETMKLRSVITWTTMVAGLALHGL 370
IH YI KHR+ + V L+N LIDMY KSG ++KA+E+FE+M+ RSV+TW+T+++ LA++G
Sbjct: 230 IHSYIIKHRLRRTVSLNNTLIDMYAKSGNVKKAVELFESMETRSVVTWSTVISALAVNGY 289
Query: 369 GREALEMFSRMERSRVKPNEVTFIAILSACSHVGLVDIGRWYFDNMNSRYQIKPKIEHYG 190
GREA+ MFSRME ++PN VTFIA+LSACSH GLV+ GR YF M ++ I P I HYG
Sbjct: 290 GREAINMFSRMEMVGIRPNSVTFIALLSACSHAGLVEEGRLYFKTMEEKHGISPDIRHYG 349
Query: 189 CMVDLLGRAGYLEEAQELVRGMPYEANGAIWGSLLAASRVHGDVVLGECALKHLIKLEPH 10
CMVDL GRAGYL+EA +V+ MP+EAN AIWGSLLAASR G V LGE AL+HL ++EPH
Sbjct: 350 CMVDLFGRAGYLDEAANMVKMMPFEANAAIWGSLLAASRNQGHVELGEQALQHLTEVEPH 409
Query: 9 NSG 1
NSG
Sbjct: 410 NSG 412