BLASTX nr result
ID: Akebia26_contig00024509
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia26_contig00024509
(973 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ACF16408.1| chloroplast ribulose 1,5-bisphosphate carboxylase... 233 9e-59
ref|XP_005648578.1| chloroplast ribulose 1,5-bisphosphate carbox... 231 3e-58
gb|ACU32662.1| chloroplast ribulose-1,5-bisphosphate carboxylase... 216 9e-54
ref|XP_005852247.1| hypothetical protein CHLNCDRAFT_29368 [Chlor... 214 3e-53
ref|XP_005851923.1| hypothetical protein CHLNCDRAFT_59545 [Chlor... 214 3e-53
gb|ACU32661.1| chloroplast ribulose-1,5-bisphosphate carboxylase... 212 2e-52
sp|P16137.1|RBS4_ACEAT RecName: Full=Ribulose bisphosphate carbo... 207 4e-51
dbj|BAD42334.1| ribulose-1,5-bisphosphate carboxyase/oxygenase s... 207 4e-51
dbj|BAM68686.1| ribulose 1,5-bisphosphate carboxlase/oxygenase s... 207 7e-51
dbj|BAD42333.1| ribulose-1,5-bisphosphate carboxyase/oxygenase s... 206 9e-51
sp|P16134.1|RBS1_ACEAT RecName: Full=Ribulose bisphosphate carbo... 206 2e-50
sp|P16135.1|RBS2_ACEAT RecName: Full=Ribulose bisphosphate carbo... 206 2e-50
sp|P16138.1|RBS5_ACEAT RecName: Full=Ribulose bisphosphate carbo... 206 2e-50
gb|AAU93597.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 206 2e-50
sp|Q38692.1|RBS6_ACECL RecName: Full=Ribulose bisphosphate carbo... 205 2e-50
sp|P16136.1|RBS3_ACEAT RecName: Full=Ribulose bisphosphate carbo... 205 3e-50
sp|P16132.1|RBS4_ACECL RecName: Full=Ribulose bisphosphate carbo... 204 4e-50
sp|P26985.2|RBS_BATOE RecName: Full=Ribulose bisphosphate carbox... 204 4e-50
sp|P16133.1|RBS5_ACECL RecName: Full=Ribulose bisphosphate carbo... 204 6e-50
sp|P16131.1|RBS3_ACECL RecName: Full=Ribulose bisphosphate carbo... 204 6e-50
>gb|ACF16408.1| chloroplast ribulose 1,5-bisphosphate carboxylase/oxygenase small
subunit [Lobosphaera incisa]
Length = 189
Score = 233 bits (594), Expect = 9e-59
Identities = 110/162 (67%), Positives = 126/162 (77%)
Frame = -2
Query: 792 LQKAERNTFAARTVSNGIKTRQMMVWQPTDNKYFETLSFLPPLSQDEIARQVDYVTRNGW 613
L A TFA +TVSNGIKTRQMMVWQPT+N+YFETLSFLPPL+ D+IA+QVDY+ NGW
Sbjct: 28 LAPARAATFAQKTVSNGIKTRQMMVWQPTNNRYFETLSFLPPLTDDQIAKQVDYMINNGW 87
Query: 612 TPCLEFADVEFAYVSSKNTNRLGPVTCNYFDNRYWTMYKLPMFGCTDASQVLGEVQNASK 433
PCLEF++ AYV+S N R G V Y DNRYWTM+KLPMFGCTD QVL E+ NA K
Sbjct: 88 VPCLEFSEANMAYVASDNCIRYGNVASGYQDNRYWTMFKLPMFGCTDPGQVLTEIANAEK 147
Query: 432 TFPNAYIRLVAFDAKRQVQVAGFLVHRPDSATDFQSPDKRSV 307
FP+AYIRLVAFD Q QVAGFLVHRP SA DF+ P +RS+
Sbjct: 148 CFPDAYIRLVAFDNVTQTQVAGFLVHRPASANDFRKPSERSI 189
>ref|XP_005648578.1| chloroplast ribulose 1,5-bisphosphate carboxylase/oxygenase small
subunit [Coccomyxa subellipsoidea C-169]
gi|384250555|gb|EIE24034.1| chloroplast ribulose
1,5-bisphosphate carboxylase/oxygenase small subunit
[Coccomyxa subellipsoidea C-169]
Length = 195
Score = 231 bits (589), Expect = 3e-58
Identities = 108/174 (62%), Positives = 131/174 (75%), Gaps = 2/174 (1%)
Frame = -2
Query: 825 RPAFTGLARVPLQKAERNTFAARTVSNGIKTRQMMVWQPTDNKYFETLSFLPPLSQDEIA 646
+ F+GLARV L TFA RTVSNG +TRQM+VW+P DNK+FET S+LPPL+ D+IA
Sbjct: 21 KAGFSGLARVALPAKAVPTFAQRTVSNGCRTRQMLVWEPVDNKFFETFSYLPPLTDDQIA 80
Query: 645 RQVDYVTRNGWTPCLEFADVEFAYVSSKNTNRL--GPVTCNYFDNRYWTMYKLPMFGCTD 472
+QVDY+ R GWTP LEF++ E AYV R G +CNY+DNRYW MYKLPMFGCTD
Sbjct: 81 KQVDYIIRQGWTPALEFSNAESAYVKDVANIRFTGGSASCNYYDNRYWAMYKLPMFGCTD 140
Query: 471 ASQVLGEVQNASKTFPNAYIRLVAFDAKRQVQVAGFLVHRPDSATDFQSPDKRS 310
ASQVL E+ NA KTFP++Y+R+ AFDA RQVQ LVHRP SATD++ P+ RS
Sbjct: 141 ASQVLAEIANAVKTFPDSYVRMAAFDAVRQVQTVAILVHRPASATDYRLPENRS 194
>gb|ACU32662.1| chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Chlorella pyrenoidosa]
Length = 184
Score = 216 bits (551), Expect = 9e-54
Identities = 108/176 (61%), Positives = 130/176 (73%), Gaps = 9/176 (5%)
Frame = -2
Query: 807 LARVPLQKAERN-------TFAARTVSNGI--KTRQMMVWQPTDNKYFETLSFLPPLSQD 655
L + P+ +R+ TF A TVSNG KT MMVW P +NK+FET S+LPPLS D
Sbjct: 9 LVKAPVATTQRSVLKPAGKTFKAVTVSNGNVQKTSAMMVWTPVNNKFFETFSYLPPLSGD 68
Query: 654 EIARQVDYVTRNGWTPCLEFADVEFAYVSSKNTNRLGPVTCNYFDNRYWTMYKLPMFGCT 475
+IARQVDY+ NGWTPCLEFAD + AYVS+ + R G V+ Y DNRYWTM+KLPMFGCT
Sbjct: 69 QIARQVDYIVLNGWTPCLEFADPDCAYVSNDSCVRFGNVSVGYQDNRYWTMWKLPMFGCT 128
Query: 474 DASQVLGEVQNASKTFPNAYIRLVAFDAKRQVQVAGFLVHRPDSATDFQSPDKRSV 307
D SQVL E+ N + FP+AYIRLVAFDA RQVQ+ GFLVHRP SAT+ + P++RSV
Sbjct: 129 DPSQVLKEISNCERAFPDAYIRLVAFDAIRQVQITGFLVHRPMSATEHRRPNERSV 184
>ref|XP_005852247.1| hypothetical protein CHLNCDRAFT_29368 [Chlorella variabilis]
gi|307111911|gb|EFN60145.1| hypothetical protein
CHLNCDRAFT_29368 [Chlorella variabilis]
Length = 184
Score = 214 bits (546), Expect = 3e-53
Identities = 108/170 (63%), Positives = 126/170 (74%), Gaps = 3/170 (1%)
Frame = -2
Query: 807 LARVPLQKAERNTFAARTVSNGI--KTRQMMVWQPTDNKYFETLSFLPPLSQDEIARQVD 634
+A PL++A +NTFAARTVSNG K M VW P +NK FET SFLPPL+ EI+RQVD
Sbjct: 16 MASTPLKQA-KNTFAARTVSNGSIKKVSAMQVWTPLNNKMFETFSFLPPLTDGEISRQVD 74
Query: 633 YVTRNGWTPCLEFADVEFAYVSSKNTNRL-GPVTCNYFDNRYWTMYKLPMFGCTDASQVL 457
Y+ RNGWTPCLEFAD + AYV +T RL G Y+DNRYW M+KLPMFGCTD QVL
Sbjct: 75 YIVRNGWTPCLEFADADHAYVDDTSTIRLRGNAVPLYYDNRYWCMWKLPMFGCTDGQQVL 134
Query: 456 GEVQNASKTFPNAYIRLVAFDAKRQVQVAGFLVHRPDSATDFQSPDKRSV 307
E+QN + FP+AYIRLV FD+ RQVQVAG LV+RP S D+QSP RSV
Sbjct: 135 REIQNCRRAFPDAYIRLVGFDSVRQVQVAGLLVNRPASVRDYQSPSTRSV 184
>ref|XP_005851923.1| hypothetical protein CHLNCDRAFT_59545 [Chlorella variabilis]
gi|307111587|gb|EFN59821.1| hypothetical protein
CHLNCDRAFT_59545 [Chlorella variabilis]
Length = 184
Score = 214 bits (546), Expect = 3e-53
Identities = 108/170 (63%), Positives = 126/170 (74%), Gaps = 3/170 (1%)
Frame = -2
Query: 807 LARVPLQKAERNTFAARTVSNGI--KTRQMMVWQPTDNKYFETLSFLPPLSQDEIARQVD 634
+A PL++A +NTFAARTVSNG K M VW P +NK FET SFLPPL+ EI+RQVD
Sbjct: 16 MASTPLKQA-KNTFAARTVSNGSIKKVSAMQVWTPLNNKMFETFSFLPPLTDGEISRQVD 74
Query: 633 YVTRNGWTPCLEFADVEFAYVSSKNTNRL-GPVTCNYFDNRYWTMYKLPMFGCTDASQVL 457
Y+ RNGWTPCLEFAD + AYV +T RL G Y+DNRYW M+KLPMFGCTD QVL
Sbjct: 75 YIVRNGWTPCLEFADADHAYVDDTSTIRLRGNAVPLYYDNRYWCMWKLPMFGCTDGQQVL 134
Query: 456 GEVQNASKTFPNAYIRLVAFDAKRQVQVAGFLVHRPDSATDFQSPDKRSV 307
E+QN + FP+AYIRLV FD+ RQVQVAG LV+RP S D+QSP RSV
Sbjct: 135 REIQNCRRAFPDAYIRLVGFDSVRQVQVAGLLVNRPASVRDYQSPSTRSV 184
>gb|ACU32661.1| chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Chlorella pyrenoidosa]
Length = 181
Score = 212 bits (540), Expect = 2e-52
Identities = 102/162 (62%), Positives = 120/162 (74%), Gaps = 2/162 (1%)
Frame = -2
Query: 786 KAERNTFAARTVSNGI--KTRQMMVWQPTDNKYFETLSFLPPLSQDEIARQVDYVTRNGW 613
K +NT AARTVSNG KT M VW P +NK FET S+LPPL+ EI+RQVDY+ NGW
Sbjct: 20 KQAKNTSAARTVSNGSIQKTTAMQVWTPINNKMFETFSYLPPLTDAEISRQVDYIVNNGW 79
Query: 612 TPCLEFADVEFAYVSSKNTNRLGPVTCNYFDNRYWTMYKLPMFGCTDASQVLGEVQNASK 433
TPCLEFA+ AY S++N R+ TC Y+DNRYWTM+KLPMFGCTD QVL EV N +
Sbjct: 80 TPCLEFAESASAYASNENCIRMNNTTCLYYDNRYWTMWKLPMFGCTDGHQVLQEVANCRR 139
Query: 432 TFPNAYIRLVAFDAKRQVQVAGFLVHRPDSATDFQSPDKRSV 307
FP+AYIR+V FD RQVQVAGFLV+RP +A D+Q P RSV
Sbjct: 140 AFPDAYIRMVGFDPIRQVQVAGFLVNRPSTARDYQKPSTRSV 181
>sp|P16137.1|RBS4_ACEAT RecName: Full=Ribulose bisphosphate carboxylase small chain 4,
chloroplastic; Short=RuBisCO small subunit 4; Flags:
Precursor gi|732554|emb|CAA36111.1| ribulose
bisphosphate carboxylase, small subunit precursor
[Acetabularia acetabulum]
Length = 182
Score = 207 bits (528), Expect = 4e-51
Identities = 102/176 (57%), Positives = 127/176 (72%)
Frame = -2
Query: 834 QAPRPAFTGLARVPLQKAERNTFAARTVSNGIKTRQMMVWQPTDNKYFETLSFLPPLSQD 655
Q +PA T P + +FA+ TV+N K R+MMVWQP +NK FET SFLPPL+ +
Sbjct: 15 QCTKPAAT-----PKVVTSKRSFAS-TVAN--KNREMMVWQPFNNKMFETFSFLPPLTDE 66
Query: 654 EIARQVDYVTRNGWTPCLEFADVEFAYVSSKNTNRLGPVTCNYFDNRYWTMYKLPMFGCT 475
+I++QVDY+ N WTPCLEFA + AY ++N R+GPV Y DNRYWTM+KLPMFGCT
Sbjct: 67 QISKQVDYILANSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYWTMWKLPMFGCT 126
Query: 474 DASQVLGEVQNASKTFPNAYIRLVAFDAKRQVQVAGFLVHRPDSATDFQSPDKRSV 307
D SQVL E+Q + FP+AYIRLV FDA RQVQ++GFLVHRP SATD++ P R V
Sbjct: 127 DGSQVLSEIQACTNAFPDAYIRLVCFDANRQVQISGFLVHRPPSATDYRLPADRQV 182
>dbj|BAD42334.1| ribulose-1,5-bisphosphate carboxyase/oxygenase small subunit
[Nannochloris bacillaris]
Length = 182
Score = 207 bits (528), Expect = 4e-51
Identities = 105/174 (60%), Positives = 122/174 (70%), Gaps = 5/174 (2%)
Frame = -2
Query: 813 TGLARV-PLQKAERNTFAART--VSNGI--KTRQMMVWQPTDNKYFETLSFLPPLSQDEI 649
T RV P+ K + ART VSNG KT M+VW P +NK+FET SFLPPLS EI
Sbjct: 9 TAAVRVAPITKVNATSTKARTAFVSNGTVKKTTAMLVWTPINNKFFETFSFLPPLSDSEI 68
Query: 648 ARQVDYVTRNGWTPCLEFADVEFAYVSSKNTNRLGPVTCNYFDNRYWTMYKLPMFGCTDA 469
+QVDY+ RNGWTPCLEF+D E AY+ NT RL + Y DNRYW+M+KLPMFGCTD
Sbjct: 69 TKQVDYIVRNGWTPCLEFSDPEGAYIGDTNTVRLQGTSAGYQDNRYWSMWKLPMFGCTDG 128
Query: 468 SQVLGEVQNASKTFPNAYIRLVAFDAKRQVQVAGFLVHRPDSATDFQSPDKRSV 307
SQVL E+ +K FP AYIRLVAFD ++QVQ GFLVHRP A +FQ DKRSV
Sbjct: 129 SQVLKEIAGCTKAFPGAYIRLVAFDNQKQVQCTGFLVHRPVGAKEFQPADKRSV 182
>dbj|BAM68686.1| ribulose 1,5-bisphosphate carboxlase/oxygenase small subunit
[Botryococcus braunii] gi|426206142|dbj|BAM68687.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Botryococcus braunii]
Length = 190
Score = 207 bits (526), Expect = 7e-51
Identities = 98/167 (58%), Positives = 122/167 (73%)
Frame = -2
Query: 807 LARVPLQKAERNTFAARTVSNGIKTRQMMVWQPTDNKYFETLSFLPPLSQDEIARQVDYV 628
+AR + N +A +TVSNGIKT MMVW PT+NK+FET S+LPPLS EIA+QV+Y+
Sbjct: 24 VARPAILAPAVNQWAKKTVSNGIKTSAMMVWTPTNNKFFETFSYLPPLSDAEIAKQVEYI 83
Query: 627 TRNGWTPCLEFADVEFAYVSSKNTNRLGPVTCNYFDNRYWTMYKLPMFGCTDASQVLGEV 448
NG+ CLEFA+ + AYV K+ R+ V Y+DNRYWTM+KLPMFGCTD QVL E+
Sbjct: 84 VNNGYIACLEFAESDLAYVGDKSMIRMNNVAPCYYDNRYWTMWKLPMFGCTDPDQVLREI 143
Query: 447 QNASKTFPNAYIRLVAFDAKRQVQVAGFLVHRPDSATDFQSPDKRSV 307
+K FP+A+IRLVAFD KRQVQ+ G LVHRP +A D+Q P RSV
Sbjct: 144 MLCTKAFPDAFIRLVAFDNKRQVQIGGMLVHRPPTARDYQKPQNRSV 190
>dbj|BAD42333.1| ribulose-1,5-bisphosphate carboxyase/oxygenase small subunit
[Nannochloris bacillaris]
Length = 182
Score = 206 bits (525), Expect = 9e-51
Identities = 102/167 (61%), Positives = 119/167 (71%), Gaps = 4/167 (2%)
Frame = -2
Query: 795 PLQKAERNTFAART--VSNGI--KTRQMMVWQPTDNKYFETLSFLPPLSQDEIARQVDYV 628
P+ K + ART VSNG KT M+VW P +NK+FET SFLPPLS EI +QVDY+
Sbjct: 16 PITKVNAASTKARTAFVSNGTVKKTTAMLVWTPINNKFFETFSFLPPLSDSEITKQVDYI 75
Query: 627 TRNGWTPCLEFADVEFAYVSSKNTNRLGPVTCNYFDNRYWTMYKLPMFGCTDASQVLGEV 448
RNGWTPCLEF+D E AY+ NT RL + Y DNRYW+M+KLPMFGCTD SQVL E+
Sbjct: 76 VRNGWTPCLEFSDPEGAYIGDTNTVRLQGTSAGYQDNRYWSMWKLPMFGCTDGSQVLKEI 135
Query: 447 QNASKTFPNAYIRLVAFDAKRQVQVAGFLVHRPDSATDFQSPDKRSV 307
+K FP AYIRLVAFD ++QVQ GFLVHRP A +FQ DKRSV
Sbjct: 136 AGCTKAFPGAYIRLVAFDNQKQVQCTGFLVHRPVGAKEFQPADKRSV 182
>sp|P16134.1|RBS1_ACEAT RecName: Full=Ribulose bisphosphate carboxylase small chain 1,
chloroplastic; Short=RuBisCO small subunit 1; Flags:
Precursor gi|732551|emb|CAA36108.1| ribulose
bisphosphate carboxylase, small subunit precursor
[Acetabularia acetabulum]
Length = 182
Score = 206 bits (523), Expect = 2e-50
Identities = 93/144 (64%), Positives = 113/144 (78%)
Frame = -2
Query: 738 KTRQMMVWQPTDNKYFETLSFLPPLSQDEIARQVDYVTRNGWTPCLEFADVEFAYVSSKN 559
K R+MMVWQP +NK FET SFLPPL+ ++I++QVDY+ N WTPCLEFA + AY ++N
Sbjct: 39 KNREMMVWQPFNNKMFETFSFLPPLTDEQISKQVDYILTNSWTPCLEFAASDQAYAGNEN 98
Query: 558 TNRLGPVTCNYFDNRYWTMYKLPMFGCTDASQVLGEVQNASKTFPNAYIRLVAFDAKRQV 379
R+GPV Y DNRYWTM+KLPMFGCTD SQVL E+Q +K FP+AYIRLV FDA RQV
Sbjct: 99 CIRMGPVASTYQDNRYWTMWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDANRQV 158
Query: 378 QVAGFLVHRPDSATDFQSPDKRSV 307
Q++GFLVHRP SATD++ P R V
Sbjct: 159 QISGFLVHRPPSATDYRLPADRQV 182
>sp|P16135.1|RBS2_ACEAT RecName: Full=Ribulose bisphosphate carboxylase small chain 2,
chloroplastic; Short=RuBisCO small subunit 2; Flags:
Precursor gi|732552|emb|CAA36109.1| ribulose
bisphosphate carboxylase, small subunit precursor
[Acetabularia acetabulum]
Length = 173
Score = 206 bits (523), Expect = 2e-50
Identities = 93/144 (64%), Positives = 113/144 (78%)
Frame = -2
Query: 738 KTRQMMVWQPTDNKYFETLSFLPPLSQDEIARQVDYVTRNGWTPCLEFADVEFAYVSSKN 559
K R+MMVWQP +NK FET SFLPPL+ ++I++QVDY+ N WTPCLEFA + AY ++N
Sbjct: 30 KNREMMVWQPFNNKMFETFSFLPPLTDEQISKQVDYILTNSWTPCLEFAASDQAYAGNEN 89
Query: 558 TNRLGPVTCNYFDNRYWTMYKLPMFGCTDASQVLGEVQNASKTFPNAYIRLVAFDAKRQV 379
R+GPV Y DNRYWTM+KLPMFGCTD SQVL E+Q +K FP+AYIRLV FDA RQV
Sbjct: 90 CIRMGPVASTYQDNRYWTMWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDANRQV 149
Query: 378 QVAGFLVHRPDSATDFQSPDKRSV 307
Q++GFLVHRP SATD++ P R V
Sbjct: 150 QISGFLVHRPPSATDYRLPADRQV 173
>sp|P16138.1|RBS5_ACEAT RecName: Full=Ribulose bisphosphate carboxylase small chain 5,
chloroplastic; Short=RuBisCO small subunit 5; Flags:
Precursor gi|732555|emb|CAA36112.1| ribulose
bisphosphate carboxylase, small subunit precursor
[Acetabularia acetabulum]
Length = 183
Score = 206 bits (523), Expect = 2e-50
Identities = 98/166 (59%), Positives = 119/166 (71%)
Frame = -2
Query: 804 ARVPLQKAERNTFAARTVSNGIKTRQMMVWQPTDNKYFETLSFLPPLSQDEIARQVDYVT 625
A VP + FA + N K R MMVWQP +NK FET SFLPPL+ ++I++QVDY+
Sbjct: 20 AAVPKVVMSKGGFARTSAVN--KNRDMMVWQPFNNKMFETFSFLPPLTDEQISKQVDYIL 77
Query: 624 RNGWTPCLEFADVEFAYVSSKNTNRLGPVTCNYFDNRYWTMYKLPMFGCTDASQVLGEVQ 445
N WTPCLEFA + AY ++N R+GPV Y DNRYWTM+KLPMFGCTD SQVL E+Q
Sbjct: 78 ANSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYWTMWKLPMFGCTDGSQVLSEIQ 137
Query: 444 NASKTFPNAYIRLVAFDAKRQVQVAGFLVHRPDSATDFQSPDKRSV 307
+ FP+AYIRLV FDA RQVQ++GFLVHRP SATD++ P R V
Sbjct: 138 ACTNAFPDAYIRLVCFDANRQVQISGFLVHRPPSATDYRLPADRQV 183
>gb|AAU93597.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
[Dunaliella salina]
Length = 190
Score = 206 bits (523), Expect = 2e-50
Identities = 93/153 (60%), Positives = 119/153 (77%)
Frame = -2
Query: 765 AARTVSNGIKTRQMMVWQPTDNKYFETLSFLPPLSQDEIARQVDYVTRNGWTPCLEFADV 586
A + + ++T QMMVW+P +NK FET S+LPPL+ D+IARQVDY+ NGW PCLEF++
Sbjct: 35 APKAQAPAVRTNQMMVWRPVNNKQFETFSYLPPLTADQIARQVDYIVGNGWIPCLEFSEE 94
Query: 585 EFAYVSSKNTNRLGPVTCNYFDNRYWTMYKLPMFGCTDASQVLGEVQNASKTFPNAYIRL 406
+AYV++ NT R GPV+ NY+DNRYWTM+KLPMFGCTD +QVL E+Q S+ FP AY RL
Sbjct: 95 SYAYVANTNTARFGPVSNNYYDNRYWTMWKLPMFGCTDPAQVLMEIQKCSRAFPEAYQRL 154
Query: 405 VAFDAKRQVQVAGFLVHRPDSATDFQSPDKRSV 307
VAFD K+QVQV FLV RP ++TD+ D+RSV
Sbjct: 155 VAFDNKKQVQVISFLVQRPKNSTDYCPIDQRSV 187
>sp|Q38692.1|RBS6_ACECL RecName: Full=Ribulose bisphosphate carboxylase small chain 6,
chloroplastic; Short=RuBisCO small subunit 6; AltName:
Full=rbcS4; Flags: Precursor gi|2654375|emb|CAA82266.1|
ribulosebiphosphate carboxylase, small subunit
[Acetabularia peniculus]
Length = 182
Score = 205 bits (522), Expect = 2e-50
Identities = 98/165 (59%), Positives = 121/165 (73%)
Frame = -2
Query: 801 RVPLQKAERNTFAARTVSNGIKTRQMMVWQPTDNKYFETLSFLPPLSQDEIARQVDYVTR 622
+V + K NT AA IK R+MMVWQP +NK FET S+LPPL+ ++I++QVDY+
Sbjct: 24 KVSINKGFVNTSAA------IKNREMMVWQPFNNKMFETFSYLPPLTDEQISKQVDYILA 77
Query: 621 NGWTPCLEFADVEFAYVSSKNTNRLGPVTCNYFDNRYWTMYKLPMFGCTDASQVLGEVQN 442
N WTPCLEFA + AY ++N +GPV Y DNRYWTM+KLPMFGCTD SQVL E+Q
Sbjct: 78 NAWTPCLEFAASDQAYAGNENCITMGPVASTYQDNRYWTMWKLPMFGCTDGSQVLTEIQA 137
Query: 441 ASKTFPNAYIRLVAFDAKRQVQVAGFLVHRPDSATDFQSPDKRSV 307
+K FP+AYIRLV FDA RQVQ++GFLVHRP SATD++ P R V
Sbjct: 138 CTKAFPDAYIRLVCFDANRQVQISGFLVHRPPSATDYRLPADRQV 182
>sp|P16136.1|RBS3_ACEAT RecName: Full=Ribulose bisphosphate carboxylase small chain 3,
chloroplastic; Short=RuBisCO small subunit 3; Flags:
Precursor gi|732553|emb|CAA36110.1| ribulose bisphophate
carboxylase, small subunit precursor [Acetabularia
acetabulum]
Length = 182
Score = 205 bits (521), Expect = 3e-50
Identities = 94/144 (65%), Positives = 113/144 (78%)
Frame = -2
Query: 738 KTRQMMVWQPTDNKYFETLSFLPPLSQDEIARQVDYVTRNGWTPCLEFADVEFAYVSSKN 559
K R MMVWQP +NK FET SFLPPL+ ++I++QVDY+ N WTPCLEFA + AY ++N
Sbjct: 39 KNRGMMVWQPFNNKMFETFSFLPPLTDEQISKQVDYILINSWTPCLEFAASDQAYAGNEN 98
Query: 558 TNRLGPVTCNYFDNRYWTMYKLPMFGCTDASQVLGEVQNASKTFPNAYIRLVAFDAKRQV 379
R+GPV Y DNRYWTM+KLPMFGCTDASQVL E+Q +K FP+AYIRLV FDA RQV
Sbjct: 99 CIRMGPVASTYQDNRYWTMWKLPMFGCTDASQVLSEIQACTKAFPDAYIRLVCFDANRQV 158
Query: 378 QVAGFLVHRPDSATDFQSPDKRSV 307
Q++GFLVHRP SATD++ P R V
Sbjct: 159 QISGFLVHRPPSATDYKLPADRQV 182
>sp|P16132.1|RBS4_ACECL RecName: Full=Ribulose bisphosphate carboxylase small chain 4,
chloroplastic; Short=RuBisCO small subunit 4; Flags:
Precursor gi|732547|emb|CAA36106.1| ribulose
bisphosphate carboxylase, small subunit precursor
[Acetabularia peniculus]
Length = 182
Score = 204 bits (519), Expect = 4e-50
Identities = 92/144 (63%), Positives = 113/144 (78%)
Frame = -2
Query: 738 KTRQMMVWQPTDNKYFETLSFLPPLSQDEIARQVDYVTRNGWTPCLEFADVEFAYVSSKN 559
K R+MMVWQP +NK FET S+LPPL+ ++I++QVDY+ N WTPCLEFA + AY ++N
Sbjct: 39 KKREMMVWQPFNNKMFETFSYLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNEN 98
Query: 558 TNRLGPVTCNYFDNRYWTMYKLPMFGCTDASQVLGEVQNASKTFPNAYIRLVAFDAKRQV 379
R+GPV Y DNRYWTM+KLPMFGCTD SQVL E+Q +K FP+AYIRLV FDA RQV
Sbjct: 99 CIRMGPVASTYQDNRYWTMWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDANRQV 158
Query: 378 QVAGFLVHRPDSATDFQSPDKRSV 307
Q++GFLVHRP SATD++ P R V
Sbjct: 159 QISGFLVHRPPSATDYRLPADRQV 182
>sp|P26985.2|RBS_BATOE RecName: Full=Ribulose bisphosphate carboxylase small chain,
chloroplastic; Short=RuBisCO small subunit; Flags:
Precursor gi|2654261|emb|CAA40538.1| ribulose
bisphosphate carboxylase small subunit [Batophora
oerstedii]
Length = 175
Score = 204 bits (519), Expect = 4e-50
Identities = 95/153 (62%), Positives = 117/153 (76%), Gaps = 2/153 (1%)
Frame = -2
Query: 759 RTVSNGI--KTRQMMVWQPTDNKYFETLSFLPPLSQDEIARQVDYVTRNGWTPCLEFADV 586
R +SNG K+R MMVW+P +NK+FET S+LPPL+ D+I +QVDY+ RN WTPCLEFA
Sbjct: 23 RFLSNGTISKSRAMMVWEPFNNKFFETFSYLPPLTDDQITKQVDYILRNNWTPCLEFAGS 82
Query: 585 EFAYVSSKNTNRLGPVTCNYFDNRYWTMYKLPMFGCTDASQVLGEVQNASKTFPNAYIRL 406
+ AYV+ NT R+G Y DNRYWTM+KLPMFGC D SQVL E+ +K FP+AYIRL
Sbjct: 83 DQAYVTHDNTVRMGDCASTYQDNRYWTMWKLPMFGCIDGSQVLTEISACTKAFPDAYIRL 142
Query: 405 VAFDAKRQVQVAGFLVHRPDSATDFQSPDKRSV 307
V FDA RQVQ++GFLVHRP+SATD++ P R V
Sbjct: 143 VCFDANRQVQISGFLVHRPESATDYRLPADRQV 175
>sp|P16133.1|RBS5_ACECL RecName: Full=Ribulose bisphosphate carboxylase small chain 5,
chloroplastic; Short=RuBisCO small subunit 5; Flags:
Precursor gi|732548|emb|CAA36107.1| ribulose
bisphosphate carboxylase, small subunit precursor
[Acetabularia peniculus]
Length = 184
Score = 204 bits (518), Expect = 6e-50
Identities = 91/144 (63%), Positives = 114/144 (79%)
Frame = -2
Query: 738 KTRQMMVWQPTDNKYFETLSFLPPLSQDEIARQVDYVTRNGWTPCLEFADVEFAYVSSKN 559
K+R+MMVWQP +NK FET S+LPPL+ ++I++QVDY+ N WTPCLEFA + AY ++N
Sbjct: 41 KSREMMVWQPFNNKMFETFSYLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNEN 100
Query: 558 TNRLGPVTCNYFDNRYWTMYKLPMFGCTDASQVLGEVQNASKTFPNAYIRLVAFDAKRQV 379
R+GPV Y DNRYWTM+KLPMFGCTD SQVL E+Q +K FP+AYIRLV FDA RQV
Sbjct: 101 CIRMGPVASTYQDNRYWTMWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDANRQV 160
Query: 378 QVAGFLVHRPDSATDFQSPDKRSV 307
Q++GFLVHRP +ATD++ P R V
Sbjct: 161 QISGFLVHRPPTATDYRLPADRQV 184
>sp|P16131.1|RBS3_ACECL RecName: Full=Ribulose bisphosphate carboxylase small chain 3,
chloroplastic; Short=RuBisCO small subunit 3; Flags:
Precursor gi|732546|emb|CAA36105.1| ribulose
bisphosphate carboxylase, small subunit precursor
[Acetabularia peniculus]
Length = 183
Score = 204 bits (518), Expect = 6e-50
Identities = 92/144 (63%), Positives = 113/144 (78%)
Frame = -2
Query: 738 KTRQMMVWQPTDNKYFETLSFLPPLSQDEIARQVDYVTRNGWTPCLEFADVEFAYVSSKN 559
K R MMVWQP +NK FET S+LPPL+ ++I++QVDY+ N WTPCLEFA + AY ++N
Sbjct: 40 KCRDMMVWQPFNNKMFETFSYLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNEN 99
Query: 558 TNRLGPVTCNYFDNRYWTMYKLPMFGCTDASQVLGEVQNASKTFPNAYIRLVAFDAKRQV 379
R+GPV+ Y DNRYWTM+KLPMFGCTD SQVL E+Q +K FP+AYIRLV FDA RQV
Sbjct: 100 CIRMGPVSSTYQDNRYWTMWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDANRQV 159
Query: 378 QVAGFLVHRPDSATDFQSPDKRSV 307
Q++GFLVHRP SATD++ P R V
Sbjct: 160 QISGFLVHRPPSATDYRLPADRQV 183