BLASTX nr result

ID: Akebia26_contig00021730 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia26_contig00021730
         (332 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004301757.1| PREDICTED: uncharacterized protein LOC101307...    56   5e-06
gb|ABA97831.1| retrotransposon protein, putative, Ty3-gypsy subc...    56   6e-06
gb|ABA94267.1| retrotransposon protein, putative, unclassified [...    55   8e-06
gb|AAM14687.1|AC097446_16 Putative polyprotein [Oryza sativa Jap...    55   8e-06
emb|CAH67900.1| OSIGBa0115K01-H0319F09.6 [Oryza sativa Indica Gr...    55   8e-06
gb|AAP52177.2| retrotransposon protein, putative, unclassified [...    55   8e-06
emb|CAE02825.1| OSJNBa0043A12.30 [Oryza sativa Japonica Group]         55   8e-06
emb|CAE05649.2| OSJNBa0038O10.15 [Oryza sativa Japonica Group]         55   8e-06

>ref|XP_004301757.1| PREDICTED: uncharacterized protein LOC101307997 [Fragaria vesca
           subsp. vesca]
          Length = 832

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 29/85 (34%), Positives = 47/85 (55%)
 Frame = +2

Query: 77  IKDYPLREVLYRSDMSRRIAK*AVALGEFDLTFEPRNAHKWQAMADFLTDFPVEDPHXXX 256
           + ++PLR++L + + S R+ K A+ LGEFDL F+PR   K QA ADF+ +F   +P    
Sbjct: 199 LTNHPLRQILQKPETSGRMVKWAIELGEFDLHFKPRTTIKGQAAADFIAEFIPMNP---- 254

Query: 257 XXXVKPLEDDSPDLMSSKSRWRLFI 331
                  +D + D++     W L +
Sbjct: 255 -------DDPNQDVLPRNEIWELHV 272


>gb|ABA97831.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1564

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 26/57 (45%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
 Frame = +2

Query: 77   IKDYPLREVLYRSDMSRRIAK*AVALGEFDLTFEPRNAHKWQAMADFLTDF-PVEDP 244
            +  YPL ++L+  + + R+ K A+ L EFDL FEPR+A K Q +ADF+ ++ PV+DP
Sbjct: 919  VTSYPLGQILHNREGTGRVVKWAIELAEFDLHFEPRHAIKSQVLADFIAEWAPVDDP 975


>gb|ABA94267.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 270

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 26/61 (42%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
 Frame = +2

Query: 65  WDKAIKDYPLREVLYRSDMSRRIAK*AVALGEFDLTFEPRNAHKWQAMADFLTDF-PVED 241
           W   +  YPL ++L+  + + R+ K A+ L EFDL FEPR+A K QA+ADF+ ++ P  +
Sbjct: 189 WVTVVTSYPLGQILHNREGTGRVVKWAIELSEFDLHFEPRHAIKSQALADFVAEWTPAPE 248

Query: 242 P 244
           P
Sbjct: 249 P 249


>gb|AAM14687.1|AC097446_16 Putative polyprotein [Oryza sativa Japonica Group]
          Length = 334

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 27/78 (34%), Positives = 42/78 (53%)
 Frame = +2

Query: 86  YPLREVLYRSDMSRRIAK*AVALGEFDLTFEPRNAHKWQAMADFLTDFPVEDPHXXXXXX 265
           YPL ++L+  + + R+ K A+ L EFDL FEPR+A K Q +ADF+ ++   D H      
Sbjct: 119 YPLGQILHNQEGTGRVVKWAIELAEFDLHFEPRHAIKSQVLADFIAEWTPVDDHVPSNVP 178

Query: 266 VKPLEDDSPDLMSSKSRW 319
             P +  +P+       W
Sbjct: 179 FLPGDGGNPNADIRAGHW 196


>emb|CAH67900.1| OSIGBa0115K01-H0319F09.6 [Oryza sativa Indica Group]
          Length = 1917

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 26/57 (45%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
 Frame = +2

Query: 77   IKDYPLREVLYRSDMSRRIAK*AVALGEFDLTFEPRNAHKWQAMADFLTDF-PVEDP 244
            +  YPL ++L+  + +RR+ K A+ L EFDL FEPR+A K QA+ADF+ ++ P  +P
Sbjct: 1251 VTSYPLGQILHNREGTRRVVKWAIELSEFDLHFEPRHAIKSQALADFVAEWTPAPEP 1307


>gb|AAP52177.2| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 326

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 27/78 (34%), Positives = 42/78 (53%)
 Frame = +2

Query: 86  YPLREVLYRSDMSRRIAK*AVALGEFDLTFEPRNAHKWQAMADFLTDFPVEDPHXXXXXX 265
           YPL ++L+  + + R+ K A+ L EFDL FEPR+A K Q +ADF+ ++   D H      
Sbjct: 111 YPLGQILHNQEGTGRVVKWAIELAEFDLHFEPRHAIKSQVLADFIAEWTPVDDHVPSNVP 170

Query: 266 VKPLEDDSPDLMSSKSRW 319
             P +  +P+       W
Sbjct: 171 FLPGDGGNPNADIRAGHW 188


>emb|CAE02825.1| OSJNBa0043A12.30 [Oryza sativa Japonica Group]
          Length = 1827

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 26/57 (45%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
 Frame = +2

Query: 77   IKDYPLREVLYRSDMSRRIAK*AVALGEFDLTFEPRNAHKWQAMADFLTDF-PVEDP 244
            +  YPL ++L+  + +RR+ K A+ L EFDL FEPR+A K QA+ADF+ ++ P  +P
Sbjct: 1234 VTSYPLGQILHNREGTRRVVKWAIELSEFDLHFEPRHAIKSQALADFVAEWTPAPEP 1290


>emb|CAE05649.2| OSJNBa0038O10.15 [Oryza sativa Japonica Group]
          Length = 1989

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 26/57 (45%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
 Frame = +2

Query: 77   IKDYPLREVLYRSDMSRRIAK*AVALGEFDLTFEPRNAHKWQAMADFLTDF-PVEDP 244
            +  YPL ++L+  + +RR+ K A+ L EFDL FEPR+A K QA+ADF+ ++ P  +P
Sbjct: 1323 VTSYPLGQILHNREGTRRVVKWAIELSEFDLHFEPRHAIKSQALADFVAEWTPAPEP 1379


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