BLASTX nr result
ID: Akebia26_contig00021730
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Akebia26_contig00021730 (332 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004301757.1| PREDICTED: uncharacterized protein LOC101307... 56 5e-06 gb|ABA97831.1| retrotransposon protein, putative, Ty3-gypsy subc... 56 6e-06 gb|ABA94267.1| retrotransposon protein, putative, unclassified [... 55 8e-06 gb|AAM14687.1|AC097446_16 Putative polyprotein [Oryza sativa Jap... 55 8e-06 emb|CAH67900.1| OSIGBa0115K01-H0319F09.6 [Oryza sativa Indica Gr... 55 8e-06 gb|AAP52177.2| retrotransposon protein, putative, unclassified [... 55 8e-06 emb|CAE02825.1| OSJNBa0043A12.30 [Oryza sativa Japonica Group] 55 8e-06 emb|CAE05649.2| OSJNBa0038O10.15 [Oryza sativa Japonica Group] 55 8e-06 >ref|XP_004301757.1| PREDICTED: uncharacterized protein LOC101307997 [Fragaria vesca subsp. vesca] Length = 832 Score = 56.2 bits (134), Expect = 5e-06 Identities = 29/85 (34%), Positives = 47/85 (55%) Frame = +2 Query: 77 IKDYPLREVLYRSDMSRRIAK*AVALGEFDLTFEPRNAHKWQAMADFLTDFPVEDPHXXX 256 + ++PLR++L + + S R+ K A+ LGEFDL F+PR K QA ADF+ +F +P Sbjct: 199 LTNHPLRQILQKPETSGRMVKWAIELGEFDLHFKPRTTIKGQAAADFIAEFIPMNP---- 254 Query: 257 XXXVKPLEDDSPDLMSSKSRWRLFI 331 +D + D++ W L + Sbjct: 255 -------DDPNQDVLPRNEIWELHV 272 >gb|ABA97831.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa Japonica Group] Length = 1564 Score = 55.8 bits (133), Expect = 6e-06 Identities = 26/57 (45%), Positives = 40/57 (70%), Gaps = 1/57 (1%) Frame = +2 Query: 77 IKDYPLREVLYRSDMSRRIAK*AVALGEFDLTFEPRNAHKWQAMADFLTDF-PVEDP 244 + YPL ++L+ + + R+ K A+ L EFDL FEPR+A K Q +ADF+ ++ PV+DP Sbjct: 919 VTSYPLGQILHNREGTGRVVKWAIELAEFDLHFEPRHAIKSQVLADFIAEWAPVDDP 975 >gb|ABA94267.1| retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] Length = 270 Score = 55.5 bits (132), Expect = 8e-06 Identities = 26/61 (42%), Positives = 40/61 (65%), Gaps = 1/61 (1%) Frame = +2 Query: 65 WDKAIKDYPLREVLYRSDMSRRIAK*AVALGEFDLTFEPRNAHKWQAMADFLTDF-PVED 241 W + YPL ++L+ + + R+ K A+ L EFDL FEPR+A K QA+ADF+ ++ P + Sbjct: 189 WVTVVTSYPLGQILHNREGTGRVVKWAIELSEFDLHFEPRHAIKSQALADFVAEWTPAPE 248 Query: 242 P 244 P Sbjct: 249 P 249 >gb|AAM14687.1|AC097446_16 Putative polyprotein [Oryza sativa Japonica Group] Length = 334 Score = 55.5 bits (132), Expect = 8e-06 Identities = 27/78 (34%), Positives = 42/78 (53%) Frame = +2 Query: 86 YPLREVLYRSDMSRRIAK*AVALGEFDLTFEPRNAHKWQAMADFLTDFPVEDPHXXXXXX 265 YPL ++L+ + + R+ K A+ L EFDL FEPR+A K Q +ADF+ ++ D H Sbjct: 119 YPLGQILHNQEGTGRVVKWAIELAEFDLHFEPRHAIKSQVLADFIAEWTPVDDHVPSNVP 178 Query: 266 VKPLEDDSPDLMSSKSRW 319 P + +P+ W Sbjct: 179 FLPGDGGNPNADIRAGHW 196 >emb|CAH67900.1| OSIGBa0115K01-H0319F09.6 [Oryza sativa Indica Group] Length = 1917 Score = 55.5 bits (132), Expect = 8e-06 Identities = 26/57 (45%), Positives = 40/57 (70%), Gaps = 1/57 (1%) Frame = +2 Query: 77 IKDYPLREVLYRSDMSRRIAK*AVALGEFDLTFEPRNAHKWQAMADFLTDF-PVEDP 244 + YPL ++L+ + +RR+ K A+ L EFDL FEPR+A K QA+ADF+ ++ P +P Sbjct: 1251 VTSYPLGQILHNREGTRRVVKWAIELSEFDLHFEPRHAIKSQALADFVAEWTPAPEP 1307 >gb|AAP52177.2| retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] Length = 326 Score = 55.5 bits (132), Expect = 8e-06 Identities = 27/78 (34%), Positives = 42/78 (53%) Frame = +2 Query: 86 YPLREVLYRSDMSRRIAK*AVALGEFDLTFEPRNAHKWQAMADFLTDFPVEDPHXXXXXX 265 YPL ++L+ + + R+ K A+ L EFDL FEPR+A K Q +ADF+ ++ D H Sbjct: 111 YPLGQILHNQEGTGRVVKWAIELAEFDLHFEPRHAIKSQVLADFIAEWTPVDDHVPSNVP 170 Query: 266 VKPLEDDSPDLMSSKSRW 319 P + +P+ W Sbjct: 171 FLPGDGGNPNADIRAGHW 188 >emb|CAE02825.1| OSJNBa0043A12.30 [Oryza sativa Japonica Group] Length = 1827 Score = 55.5 bits (132), Expect = 8e-06 Identities = 26/57 (45%), Positives = 40/57 (70%), Gaps = 1/57 (1%) Frame = +2 Query: 77 IKDYPLREVLYRSDMSRRIAK*AVALGEFDLTFEPRNAHKWQAMADFLTDF-PVEDP 244 + YPL ++L+ + +RR+ K A+ L EFDL FEPR+A K QA+ADF+ ++ P +P Sbjct: 1234 VTSYPLGQILHNREGTRRVVKWAIELSEFDLHFEPRHAIKSQALADFVAEWTPAPEP 1290 >emb|CAE05649.2| OSJNBa0038O10.15 [Oryza sativa Japonica Group] Length = 1989 Score = 55.5 bits (132), Expect = 8e-06 Identities = 26/57 (45%), Positives = 40/57 (70%), Gaps = 1/57 (1%) Frame = +2 Query: 77 IKDYPLREVLYRSDMSRRIAK*AVALGEFDLTFEPRNAHKWQAMADFLTDF-PVEDP 244 + YPL ++L+ + +RR+ K A+ L EFDL FEPR+A K QA+ADF+ ++ P +P Sbjct: 1323 VTSYPLGQILHNREGTRRVVKWAIELSEFDLHFEPRHAIKSQALADFVAEWTPAPEP 1379