BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia26_contig00021114
         (3629 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263835.2| PREDICTED: DNA-directed RNA polymerase I sub...  1832   0.0  
emb|CBI35100.3| unnamed protein product [Vitis vinifera]             1773   0.0  
ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I sub...  1768   0.0  
ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I sub...  1763   0.0  
ref|XP_003550091.1| PREDICTED: probable DNA-directed RNA polymer...  1761   0.0  
ref|XP_004486057.1| PREDICTED: probable DNA-directed RNA polymer...  1745   0.0  
ref|XP_007133696.1| hypothetical protein PHAVU_011G201300g [Phas...  1742   0.0  
ref|XP_006464287.1| PREDICTED: probable DNA-directed RNA polymer...  1738   0.0  
ref|XP_004229596.1| PREDICTED: DNA-directed RNA polymerase I sub...  1734   0.0  
ref|XP_006366498.1| PREDICTED: probable DNA-directed RNA polymer...  1727   0.0  
ref|XP_007010837.1| Nuclear RNA polymerase A2 isoform 2 [Theobro...  1724   0.0  
ref|XP_002529996.1| DNA-directed RNA polymerase I subunit, putat...  1717   0.0  
ref|XP_006594369.1| PREDICTED: DNA-directed RNA polymerase I sub...  1665   0.0  
ref|XP_006428126.1| hypothetical protein CICLE_v10024768mg [Citr...  1650   0.0  
ref|XP_004307166.1| PREDICTED: DNA-directed RNA polymerase I sub...  1639   0.0  
ref|XP_004300118.1| PREDICTED: DNA-directed RNA polymerase I sub...  1630   0.0  
ref|XP_006415532.1| hypothetical protein EUTSA_v10006599mg [Eutr...  1627   0.0  
ref|XP_002893589.1| hypothetical protein ARALYDRAFT_313639 [Arab...  1619   0.0  
ref|NP_564341.2| nuclear RNA polymerase A2 [Arabidopsis thaliana...  1614   0.0  
ref|XP_006306612.1| hypothetical protein CARUB_v10008127mg [Caps...  1611   0.0  

>ref|XP_002263835.2| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 [Vitis
            vinifera]
          Length = 1142

 Score = 1832 bits (4746), Expect = 0.0
 Identities = 896/1159 (77%), Positives = 1008/1159 (86%)
 Frame = -3

Query: 3477 PDYKTLQDLIKPHIDSFDHFVDAGLETMLSQIRPIVVFEPYTKTKLQISFGEHELYPPQK 3298
            PDY+ L++L + HIDSFDH V+ GLET+L  ++P                          
Sbjct: 6    PDYEPLRELFQHHIDSFDHLVEFGLETLLMSVKP-------------------------- 39

Query: 3297 ERGVNSFREALYPHECREAKINYAGRFSVEVCFQYNDGPVVREKMNFGHLPIMLKSKVCH 3118
             R   + R+ALYP ECR+AKI+Y+G+   +VCFQY +G  +REK N G  PIMLKSK+CH
Sbjct: 40   -RSARTMRDALYPFECRQAKISYSGKLLADVCFQYGNGVAIREKFNLGQFPIMLKSKLCH 98

Query: 3117 LRGADPQKLIFHKEEASEMGGYFILNGLERLFRLLIIPKRNYPMSVVRVSFRERQEGYTD 2938
            LRGADPQKL+  KEE+SEMGGYFILNGLER+ RLLI+PKRNYPMS+VR SFR+R+EGYTD
Sbjct: 99   LRGADPQKLVSCKEESSEMGGYFILNGLERVVRLLILPKRNYPMSMVRNSFRDRREGYTD 158

Query: 2937 KAVLIRCVRDDQSSISVKLYYLQNGSARLGFWIRGREYLLPVGVVLKALIDTNDHEIYVS 2758
            KAV+IRCVR+DQS+++VKLYYL+NGSARLGFWI+GREYLLPVGVVLKALIDT DHEIY S
Sbjct: 159  KAVVIRCVREDQSAVTVKLYYLRNGSARLGFWIQGREYLLPVGVVLKALIDTTDHEIYES 218

Query: 2757 LTCCYSEKYQRGKGAVGTQLVGERVKIILDEVQALSLCTQLQCLQHLGAYFKPVMDGLET 2578
            LTCCYSEKY+ GKGAVGTQLVGERVKIILDEV+ LSL T+ QCLQH+G +F+ VMDGLE 
Sbjct: 219  LTCCYSEKYEGGKGAVGTQLVGERVKIILDEVRDLSLFTRHQCLQHIGEHFQLVMDGLEN 278

Query: 2577 ESHLAVGRAVLRDYVFVHLESNHDKFNLLIFMLQKLFALVDQTATPDNPDALQTQEVLLP 2398
            ES+  V  AVLR+Y+FVHL++N+DKFNLLIFM+QKLF+L+DQT+ PDNPD LQ QEVLLP
Sbjct: 279  ESYSIVADAVLREYIFVHLDNNYDKFNLLIFMVQKLFSLIDQTSVPDNPDVLQNQEVLLP 338

Query: 2397 GHLITIFLKEKLQEWLYKARRLLLEEIKNKGESFEFLSLAHIKKIIDKNPSKNISLTVEN 2218
            GHLITI+LKEKLQEWLYKARRLL +EI NK ++FEF SLAH+KK++DKNPS+ ISL VEN
Sbjct: 339  GHLITIYLKEKLQEWLYKARRLLQDEI-NKRKNFEFSSLAHVKKVMDKNPSRQISLAVEN 397

Query: 2217 MLKTGNLVTQSGLDIQQRAGMTVHAERLNFLRFLSHFRAVHRGASFAGLRSTSVRKLLPE 2038
            MLKTG LVTQSGLD+QQRAGMTV AERLNFLRFLSHFRAVHRGASFAGLR+TSVRKLLPE
Sbjct: 398  MLKTGRLVTQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKLLPE 457

Query: 2037 AWGFLCPVHTPDGEPCGLLNHMTSTCRVTSHFDSQGNIKDFFKIRLSILSVLTGIGMTPS 1858
            AWGFLCPVHTPDGEPCGLLNHM STCR+TS+FDS+GN +DFFKIR+SILSVL GIGMTP+
Sbjct: 458  AWGFLCPVHTPDGEPCGLLNHMASTCRITSYFDSRGNTRDFFKIRMSILSVLIGIGMTPA 517

Query: 1857 LPKLVRAGPPEVLAVLLDGRVXXXXXXXIVEKAVSYIRRLKLSESAGIPNDLEVGYVPLS 1678
            LPKLV+AGPPEVL+V+LDGRV        VE AV+++RRLK+S  + IP+DLEVGY+PLS
Sbjct: 518  LPKLVQAGPPEVLSVILDGRVVGSIPSSEVETAVNHLRRLKVSAISVIPDDLEVGYIPLS 577

Query: 1677 MGGAYPGLYLFTSPSRFIRPVRNISIPSEEDLDIELIGPFEQVYMEIKCADGGDGGRKNI 1498
            MGGAYPGLYLFTSPSRF+RPVRNISIPSEE  DIELIGPFEQVYMEI+C DG DGGR+NI
Sbjct: 578  MGGAYPGLYLFTSPSRFVRPVRNISIPSEEGHDIELIGPFEQVYMEIRCPDGSDGGRRNI 637

Query: 1497 FPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQAIQFRADQKLYH 1318
            FPATHEEIHPTG+LSVVA+LTPWSDHNQSPRNMYQCQM KQTMAFSSQAI  RADQKLYH
Sbjct: 638  FPATHEEIHPTGMLSVVASLTPWSDHNQSPRNMYQCQMGKQTMAFSSQAINCRADQKLYH 697

Query: 1317 LQTPQTPIVRTTAYTKYNMDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMCHGHI 1138
            LQTPQTPIVRT+AY KY+MDEFPTGTNAIVAVLAY+GYDMEDAMILNKSSV+RG+CHG I
Sbjct: 698  LQTPQTPIVRTSAYVKYSMDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCHGQI 757

Query: 1137 YQLETVDLEDERGNSDHALKLFARSNTDKSMHSSIDSDGLPFVGQIVQPNEPYCSIYNTI 958
            YQ ET+DL DE   SD   ++F RSN DKS +S IDSDGLP+VGQ++ PNEPYCSIYN +
Sbjct: 758  YQTETIDLSDENNKSDRGQRMFRRSNVDKSANSLIDSDGLPYVGQMINPNEPYCSIYNEV 817

Query: 957  SSTTKPFALKGSEPVIVDYVAIDGKNHKKPLQKVNVRFRRSRNPVIGDKFSSRHGQKGVC 778
            +S+T+   LKGSEPVIVDYVA+D KN K P QKVN+RFRR RNP+IGDKFSSRHGQKGVC
Sbjct: 818  TSSTRATKLKGSEPVIVDYVALDAKNKKHP-QKVNIRFRRPRNPIIGDKFSSRHGQKGVC 876

Query: 777  SQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIGMLFESIAAKGGSLHGKFVDATPFAS 598
            SQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTI ML ES+AAKGGSLHGKFVDATPF+ 
Sbjct: 877  SQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKFVDATPFSD 936

Query: 597  SIKTANGEXXXXXXSLVDELGPMLTSHGFNYHGLEVLYSGVLGIEMPCEIFIGPVYYQRL 418
            S++ ANGE      SLVDELG MLTS+GFNYHG+EVLYSG  G E+ CEIFIGPVYYQRL
Sbjct: 937  SLRKANGEAGSESSSLVDELGSMLTSYGFNYHGVEVLYSGFYGTELTCEIFIGPVYYQRL 996

Query: 417  RHMVSDKFQVRSTGTLDQVTRQPXXXXXXXXXXRFGEMERDAMLAHGAAYLLHDRLHTCS 238
            RHMVSDKFQVRSTGT+DQVTRQP          RFGEMERD+MLAHGAAYLLHDRLHTCS
Sbjct: 997  RHMVSDKFQVRSTGTVDQVTRQPIKGRKRGGGIRFGEMERDSMLAHGAAYLLHDRLHTCS 1056

Query: 237  DHHIADVCSLCGSILTTSFIQPQKRAVREIGGLPPGRIPKKVICHACKTSKGMETVAMPY 58
            DHHIADVCSLCGSILTTS IQPQKRAVREIGGLPPGR PKKV CHAC+TSKGMETV+MPY
Sbjct: 1057 DHHIADVCSLCGSILTTSIIQPQKRAVREIGGLPPGRAPKKVTCHACQTSKGMETVSMPY 1116

Query: 57   VFRYLAAELAAMNIKMTLK 1
            +FR+LAAELAAMNIKMTL+
Sbjct: 1117 IFRFLAAELAAMNIKMTLQ 1135


>emb|CBI35100.3| unnamed protein product [Vitis vinifera]
          Length = 1113

 Score = 1773 bits (4593), Expect = 0.0
 Identities = 869/1116 (77%), Positives = 976/1116 (87%)
 Frame = -3

Query: 3348 TKLQISFGEHELYPPQKERGVNSFREALYPHECREAKINYAGRFSVEVCFQYNDGPVVRE 3169
            T++ + FG+ ELYPPQKER   + R+ALYP ECR+AKI+Y+G+   +VCFQY +G  +RE
Sbjct: 15   TRIALWFGQPELYPPQKERSARTMRDALYPFECRQAKISYSGKLLADVCFQYGNGVAIRE 74

Query: 3168 KMNFGHLPIMLKSKVCHLRGADPQKLIFHKEEASEMGGYFILNGLERLFRLLIIPKRNYP 2989
            K N G  PIMLKSK+CHLRGADPQKL+  KEE+SEMGGYFILNGLER+ RLLI+PKRNYP
Sbjct: 75   KFNLGQFPIMLKSKLCHLRGADPQKLVSCKEESSEMGGYFILNGLERVVRLLILPKRNYP 134

Query: 2988 MSVVRVSFRERQEGYTDKAVLIRCVRDDQSSISVKLYYLQNGSARLGFWIRGREYLLPVG 2809
            MS+VR SFR+R+EGYTDKAV+IRCVR+DQS+++VKLYYL+NGSARLGFWI+GREYLLPVG
Sbjct: 135  MSMVRNSFRDRREGYTDKAVVIRCVREDQSAVTVKLYYLRNGSARLGFWIQGREYLLPVG 194

Query: 2808 VVLKALIDTNDHEIYVSLTCCYSEKYQRGKGAVGTQLVGERVKIILDEVQALSLCTQLQC 2629
            VVLKALIDT DHEIY SLTCCYSEKY+ GKGAVGTQLVGERVKIILDEV+ LSL T+ QC
Sbjct: 195  VVLKALIDTTDHEIYESLTCCYSEKYEGGKGAVGTQLVGERVKIILDEVRDLSLFTRHQC 254

Query: 2628 LQHLGAYFKPVMDGLETESHLAVGRAVLRDYVFVHLESNHDKFNLLIFMLQKLFALVDQT 2449
            LQH+G +F+ VMDGLE ES+  V  AVLR+Y+FVHL++N+DKFNLLIFM+QKLF+L+DQT
Sbjct: 255  LQHIGEHFQLVMDGLENESYSIVADAVLREYIFVHLDNNYDKFNLLIFMVQKLFSLIDQT 314

Query: 2448 ATPDNPDALQTQEVLLPGHLITIFLKEKLQEWLYKARRLLLEEIKNKGESFEFLSLAHIK 2269
            + PDNPD LQ QEVLLPGHLITI+LKEKLQEWLYKARRLL +EI NK ++FEF SLAH+K
Sbjct: 315  SVPDNPDVLQNQEVLLPGHLITIYLKEKLQEWLYKARRLLQDEI-NKRKNFEFSSLAHVK 373

Query: 2268 KIIDKNPSKNISLTVENMLKTGNLVTQSGLDIQQRAGMTVHAERLNFLRFLSHFRAVHRG 2089
            K++DKNPS+ ISL VENMLKTG LVTQSGLD+QQRAGMTV AERLNFLRFLSHFRAVHRG
Sbjct: 374  KVMDKNPSRQISLAVENMLKTGRLVTQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRG 433

Query: 2088 ASFAGLRSTSVRKLLPEAWGFLCPVHTPDGEPCGLLNHMTSTCRVTSHFDSQGNIKDFFK 1909
            ASFAGLR+TSVRKLLPEAWGFLCPVHTPDGEPCGLLNHM STCR+TS+FDS+GN +DFFK
Sbjct: 434  ASFAGLRTTSVRKLLPEAWGFLCPVHTPDGEPCGLLNHMASTCRITSYFDSRGNTRDFFK 493

Query: 1908 IRLSILSVLTGIGMTPSLPKLVRAGPPEVLAVLLDGRVXXXXXXXIVEKAVSYIRRLKLS 1729
            IR+SILSVL GIGMTP+LPKLV+AGPPEVL+V+LDGRV        VE AV+++RRLK+S
Sbjct: 494  IRMSILSVLIGIGMTPALPKLVQAGPPEVLSVILDGRVVGSIPSSEVETAVNHLRRLKVS 553

Query: 1728 ESAGIPNDLEVGYVPLSMGGAYPGLYLFTSPSRFIRPVRNISIPSEEDLDIELIGPFEQV 1549
              + IP+DLEVGY+PLSMGGAYPGLYLFTSPSRF+RPVRNISIPSEE  DIELIGPFEQV
Sbjct: 554  AISVIPDDLEVGYIPLSMGGAYPGLYLFTSPSRFVRPVRNISIPSEEGHDIELIGPFEQV 613

Query: 1548 YMEIKCADGGDGGRKNIFPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTM 1369
            YMEI+C DG DGGR+NIFPATHEEIHPTG+LSVVA+LTPWSDHNQSPRNMYQCQM KQTM
Sbjct: 614  YMEIRCPDGSDGGRRNIFPATHEEIHPTGMLSVVASLTPWSDHNQSPRNMYQCQMGKQTM 673

Query: 1368 AFSSQAIQFRADQKLYHLQTPQTPIVRTTAYTKYNMDEFPTGTNAIVAVLAYTGYDMEDA 1189
            AFSSQAI  RADQKLYHLQTPQTPIVRT+AY KY+MDEFPTGTNAIVAVLAY+GYDMEDA
Sbjct: 674  AFSSQAINCRADQKLYHLQTPQTPIVRTSAYVKYSMDEFPTGTNAIVAVLAYSGYDMEDA 733

Query: 1188 MILNKSSVERGMCHGHIYQLETVDLEDERGNSDHALKLFARSNTDKSMHSSIDSDGLPFV 1009
            MILNKSSV+RG+CHG IYQ ET+DL DE   SD   ++F RSN DKS +S IDSDGLP+V
Sbjct: 734  MILNKSSVDRGLCHGQIYQTETIDLSDENNKSDRGQRMFRRSNVDKSANSLIDSDGLPYV 793

Query: 1008 GQIVQPNEPYCSIYNTISSTTKPFALKGSEPVIVDYVAIDGKNHKKPLQKVNVRFRRSRN 829
            GQ++ PNEPYCSIYN ++S+T+   LKGSEPVIVDYVA+D KN K P QKVN+RFRR RN
Sbjct: 794  GQMINPNEPYCSIYNEVTSSTRATKLKGSEPVIVDYVALDAKNKKHP-QKVNIRFRRPRN 852

Query: 828  PVIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIGMLFESIAA 649
            P+IGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTI ML ES+AA
Sbjct: 853  PIIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAA 912

Query: 648  KGGSLHGKFVDATPFASSIKTANGEXXXXXXSLVDELGPMLTSHGFNYHGLEVLYSGVLG 469
            KGGSLHGKFVDATPF+ S++ ANGE      SLVDELG MLTS+GFNYHG+EVLYSG  G
Sbjct: 913  KGGSLHGKFVDATPFSDSLRKANGEAGSESSSLVDELGSMLTSYGFNYHGVEVLYSGFYG 972

Query: 468  IEMPCEIFIGPVYYQRLRHMVSDKFQVRSTGTLDQVTRQPXXXXXXXXXXRFGEMERDAM 289
             E+ CEIFIGPVYYQRLRHMVSDKFQVRSTGT+DQVTRQP          RFGEMERD+M
Sbjct: 973  TELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPIKGRKRGGGIRFGEMERDSM 1032

Query: 288  LAHGAAYLLHDRLHTCSDHHIADVCSLCGSILTTSFIQPQKRAVREIGGLPPGRIPKKVI 109
            LAHGAAYLLHDRLHTCSDHHIADVCSLCGSILTTS IQPQKRA                 
Sbjct: 1033 LAHGAAYLLHDRLHTCSDHHIADVCSLCGSILTTSIIQPQKRA----------------- 1075

Query: 108  CHACKTSKGMETVAMPYVFRYLAAELAAMNIKMTLK 1
                 TSKGMETV+MPY+FR+LAAELAAMNIKMTL+
Sbjct: 1076 -----TSKGMETVSMPYIFRFLAAELAAMNIKMTLQ 1106


>ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like isoform X1
            [Glycine max]
          Length = 1175

 Score = 1768 bits (4579), Expect = 0.0
 Identities = 860/1159 (74%), Positives = 993/1159 (85%)
 Frame = -3

Query: 3477 PDYKTLQDLIKPHIDSFDHFVDAGLETMLSQIRPIVVFEPYTKTKLQISFGEHELYPPQK 3298
            PD++ L++L K HI+SFD+ VDAGL+TML  I+P+ VF+ +T TKL+I      LYPPQK
Sbjct: 9    PDFEALRELFKHHIESFDYMVDAGLDTMLGHIKPVEVFDDFTSTKLRIWLDNPVLYPPQK 68

Query: 3297 ERGVNSFREALYPHECREAKINYAGRFSVEVCFQYNDGPVVREKMNFGHLPIMLKSKVCH 3118
            ER   + REAL P ECR+AKI+Y+G+ +++VCFQYNDGP++RE +NFG  PIML+SK+C+
Sbjct: 69   ERISRTMREALLPFECRQAKISYSGKITIDVCFQYNDGPIIRENVNFGQFPIMLQSKLCN 128

Query: 3117 LRGADPQKLIFHKEEASEMGGYFILNGLERLFRLLIIPKRNYPMSVVRVSFRERQEGYTD 2938
            LRGADPQKL+ +KEEASEMGGYFILNGLER+ RLLI+PKRNYPMS+VR SF +R+EGYTD
Sbjct: 129  LRGADPQKLVSYKEEASEMGGYFILNGLERVVRLLILPKRNYPMSMVRNSFSDRREGYTD 188

Query: 2937 KAVLIRCVRDDQSSISVKLYYLQNGSARLGFWIRGREYLLPVGVVLKALIDTNDHEIYVS 2758
            KAV+IRCVR DQSS+SV+LYYL+NGSARLGFW+RGREYLLPVG++LKALIDT D EIYV+
Sbjct: 189  KAVVIRCVRADQSSLSVRLYYLRNGSARLGFWLRGREYLLPVGIILKALIDTTDREIYVN 248

Query: 2757 LTCCYSEKYQRGKGAVGTQLVGERVKIILDEVQALSLCTQLQCLQHLGAYFKPVMDGLET 2578
            LT CY+EKY++GKGAVGTQLVGER KIILDE++ LSL T+LQCL+++G +F+PVM+ L+ 
Sbjct: 249  LTSCYNEKYEKGKGAVGTQLVGERAKIILDELRDLSLFTRLQCLEYIGEHFQPVMNELKN 308

Query: 2577 ESHLAVGRAVLRDYVFVHLESNHDKFNLLIFMLQKLFALVDQTATPDNPDALQTQEVLLP 2398
            +S+  V  AVL+D + VHL++N DKFNLLIFMLQKLF+L+DQT+ PDNPD+LQ  EVLLP
Sbjct: 309  DSYPIVADAVLKDCILVHLDNNFDKFNLLIFMLQKLFSLIDQTSVPDNPDSLQNHEVLLP 368

Query: 2397 GHLITIFLKEKLQEWLYKARRLLLEEIKNKGESFEFLSLAHIKKIIDKNPSKNISLTVEN 2218
            GHLIT++LKEKL++WL K RRLLL+EI  K + F+F  +  +KK++DKN  K +S  VEN
Sbjct: 369  GHLITLYLKEKLEDWLQKGRRLLLDEIDKKSKKFDFSDIVQVKKVMDKNSPKQVSTAVEN 428

Query: 2217 MLKTGNLVTQSGLDIQQRAGMTVHAERLNFLRFLSHFRAVHRGASFAGLRSTSVRKLLPE 2038
            MLKTG LVTQ+GLD+QQRAG TV AERLNFLRFLSHFRAVHRGASFAGLR+T+VRKLLPE
Sbjct: 429  MLKTGRLVTQTGLDLQQRAGYTVQAERLNFLRFLSHFRAVHRGASFAGLRTTTVRKLLPE 488

Query: 2037 AWGFLCPVHTPDGEPCGLLNHMTSTCRVTSHFDSQGNIKDFFKIRLSILSVLTGIGMTPS 1858
            +WGFLCPVHTPDGEPCGLLNHMT T R+TS FDSQGNIKD+FKI++SIL+VL  +GMTPS
Sbjct: 489  SWGFLCPVHTPDGEPCGLLNHMTCTSRITSFFDSQGNIKDYFKIKMSILNVLLEVGMTPS 548

Query: 1857 LPKLVRAGPPEVLAVLLDGRVXXXXXXXIVEKAVSYIRRLKLSESAGIPNDLEVGYVPLS 1678
            LPK+   GPPE L VLLDG V        VEK V++IR LK+S  A IP+D+EVGYVPLS
Sbjct: 549  LPKIFLPGPPEALTVLLDGCVVGCIASSEVEKVVAHIRELKVSSVAVIPDDMEVGYVPLS 608

Query: 1677 MGGAYPGLYLFTSPSRFIRPVRNISIPSEEDLDIELIGPFEQVYMEIKCADGGDGGRKNI 1498
            MGGAYPGLYL TSPSRF+RPVRNISI S+   +IELIGPFEQV+MEI+C DGGDGGRK+ 
Sbjct: 609  MGGAYPGLYLCTSPSRFVRPVRNISIASDGSENIELIGPFEQVFMEIRCPDGGDGGRKSS 668

Query: 1497 FPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQAIQFRADQKLYH 1318
            FPATHEEIHPT +LSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQ IQ RADQKLYH
Sbjct: 669  FPATHEEIHPTVMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQTIQHRADQKLYH 728

Query: 1317 LQTPQTPIVRTTAYTKYNMDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMCHGHI 1138
            LQTPQTPIVRT+ YTKYN+DEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGM HG I
Sbjct: 729  LQTPQTPIVRTSTYTKYNIDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQI 788

Query: 1137 YQLETVDLEDERGNSDHALKLFARSNTDKSMHSSIDSDGLPFVGQIVQPNEPYCSIYNTI 958
            YQ ET+DL ++ G SD + ++F +SN +KS   SIDSDGLP VGQ+++P+EPYCSIYN +
Sbjct: 789  YQTETIDLTEQGGRSDRSSRMFRKSNIEKSACPSIDSDGLPHVGQMIRPDEPYCSIYNEV 848

Query: 957  SSTTKPFALKGSEPVIVDYVAIDGKNHKKPLQKVNVRFRRSRNPVIGDKFSSRHGQKGVC 778
            +S+      KGSE V VDYVA D KN KK LQKVN+RFR  RNPVIGDKFSSRHGQKGVC
Sbjct: 849  TSSIHTLKRKGSEAVYVDYVAADVKN-KKHLQKVNIRFRHPRNPVIGDKFSSRHGQKGVC 907

Query: 777  SQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIGMLFESIAAKGGSLHGKFVDATPFAS 598
            SQLWPD+DMPFSG TGMRPDLIINPHAFPSRMTI ML ES+AAKGGSL G+FVDATPF S
Sbjct: 908  SQLWPDVDMPFSGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLRGEFVDATPFRS 967

Query: 597  SIKTANGEXXXXXXSLVDELGPMLTSHGFNYHGLEVLYSGVLGIEMPCEIFIGPVYYQRL 418
            S+   +GE      SLVD+LG +L   GFNYHGLEVLYSGV G E+ CEIFIGPVYYQRL
Sbjct: 968  SVTKDSGESDSKSGSLVDDLGLLLREKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRL 1027

Query: 417  RHMVSDKFQVRSTGTLDQVTRQPXXXXXXXXXXRFGEMERDAMLAHGAAYLLHDRLHTCS 238
            RHMVSDKFQVRSTGT+DQVTRQP          RFGEMERD++LAHGAAYLLHDRLHTCS
Sbjct: 1028 RHMVSDKFQVRSTGTIDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTCS 1087

Query: 237  DHHIADVCSLCGSILTTSFIQPQKRAVREIGGLPPGRIPKKVICHACKTSKGMETVAMPY 58
            D+HIADVCSLCGS+L T+FIQPQKR VREIGGLPPGR PKKV CHAC+TSKGMETVAMPY
Sbjct: 1088 DYHIADVCSLCGSMLATTFIQPQKRPVREIGGLPPGRAPKKVTCHACQTSKGMETVAMPY 1147

Query: 57   VFRYLAAELAAMNIKMTLK 1
            VFRYLAAELAAMNIKMTLK
Sbjct: 1148 VFRYLAAELAAMNIKMTLK 1166


>ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Cucumis
            sativus]
          Length = 1173

 Score = 1763 bits (4567), Expect = 0.0
 Identities = 843/1159 (72%), Positives = 995/1159 (85%), Gaps = 1/1159 (0%)
 Frame = -3

Query: 3474 DYKTLQDLIKPHIDSFDHFVDAGLETMLSQIRPIVVFEPYTKTKLQISFGEHELYPPQKE 3295
            DY+ L++L + HI+SFDH VDAGLET+++ I+P+ +++ +T  KL+I  G+ ELYPPQKE
Sbjct: 10   DYEALRELFRHHIESFDHLVDAGLETLMNSIKPVEIYDSFTNKKLRIWLGKPELYPPQKE 69

Query: 3294 RGVNSFREALYPHECREAKINYAGRFSVEVCFQYNDGPVVREKMNFGHLPIMLKSKVCHL 3115
            R + + REAL P+ECR+AKI+Y G+F  +VCFQY++  V+REK NFG  PIMLKSK+CHL
Sbjct: 70   RNLRTIREALLPYECRQAKISYTGKFMADVCFQYDEKAVIREKFNFGQFPIMLKSKLCHL 129

Query: 3114 RGADPQKLIFHKEEASEMGGYFILNGLERLFRLLIIPKRNYPMSVVRVSFRERQEGYTDK 2935
            RG DP+KL+ + EEASEMGGYF++NGLER+ RLLI PKRNYP S+VR SF +R+EGYTDK
Sbjct: 130  RGLDPKKLVSYNEEASEMGGYFVMNGLERVVRLLIAPKRNYPTSMVRNSFSDRREGYTDK 189

Query: 2934 AVLIRCVRDDQSSISVKLYYLQNGSARLGFWIRGREYLLPVGVVLKALIDTNDHEIYVSL 2755
            AV+IRCVR+DQSS++VKLYYL+NGSARLGFW++G+EYLLP+GVVLKALIDT DHEIY SL
Sbjct: 190  AVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASL 249

Query: 2754 TCCYSEKYQRGKGAVGTQLVGERVKIILDEVQALSLCTQLQCLQHLGAYFKPVMDGLETE 2575
            T CYS+K+ + KGAVGTQLVGER KIILDEV+ L+L    QCL H+G +F+PVM+GL  E
Sbjct: 250  TSCYSDKHGKSKGAVGTQLVGERAKIILDEVRDLALFDHRQCLDHIGQHFQPVMEGLGKE 309

Query: 2574 SHLAVGRAVLRDYVFVHLESNHDKFNLLIFMLQKLFALVDQTATPDNPDALQTQEVLLPG 2395
                V  AVL+DY+FVHL++N+DKFNLLIFM QKLF+L+DQT+ PDNPD+LQ Q+VLLPG
Sbjct: 310  KFSTVADAVLKDYIFVHLDNNYDKFNLLIFMAQKLFSLIDQTSVPDNPDSLQNQDVLLPG 369

Query: 2394 HLITIFLKEKLQEWLYKARRLLLEEIKNKGESFEFLSLAHIKKIIDKNPSKNISLTVENM 2215
             LIT++LKEKL++WL K ++LL +EI N  ++FEF SLAH+KK++DKNPSK +S  VENM
Sbjct: 370  QLITLYLKEKLEDWLQKVKKLLEDEISNPSKNFEFCSLAHVKKVMDKNPSKQVSSAVENM 429

Query: 2214 LKTGNLVTQSGLDIQQRAGMTVHAERLNFLRFLSHFRAVHRGASFAGLRSTSVRKLLPEA 2035
            LKTG LVTQ+GLD+QQRAG TV AERLNFLRF+SHFRAVHRGASFAGLR+T+VRKLLPE+
Sbjct: 430  LKTGRLVTQTGLDLQQRAGFTVQAERLNFLRFVSHFRAVHRGASFAGLRTTTVRKLLPES 489

Query: 2034 WGFLCPVHTPDGEPCGLLNHMTSTCRVTSHFDSQGNIKDFFKIRLSILSVLTGIGMTPSL 1855
            WGFLCPVHTPDGEPCGLLNH+TSTCR+TSHF+SQG ++DF+KIR SILSVL  +GM PSL
Sbjct: 490  WGFLCPVHTPDGEPCGLLNHLTSTCRITSHFNSQGKVRDFYKIRTSILSVLIAVGMIPSL 549

Query: 1854 PKLVRAGPPEVLAVLLDGRVXXXXXXXIVEKAVSYIRRLKLSESAGIPNDLEVGYVPLSM 1675
            PKLV+ G P+ L VLLDGR+        VEK V+++RRLK+     IP+DLEVGYVPLS+
Sbjct: 550  PKLVQMGLPDFLNVLLDGRIVGYISSNEVEKIVAHLRRLKVLSPHVIPDDLEVGYVPLSI 609

Query: 1674 GGAYPGLYLFTSPSRFIRPVRNISIPSEEDLDIELIGPFEQVYMEIKCADGGDGGRKNIF 1495
             GAYPGLYLFTSPSRF+RPV+N+SI  E++ +IELIGPFEQV+MEI+C DGGDGGRK+ F
Sbjct: 610  SGAYPGLYLFTSPSRFVRPVKNLSISPEDNHNIELIGPFEQVFMEIRCPDGGDGGRKDEF 669

Query: 1494 PATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQAIQFRADQKLYHL 1315
            PATHEEIHPTG+LSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFS QAI++RADQKLYHL
Sbjct: 670  PATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIRYRADQKLYHL 729

Query: 1314 QTPQTPIVRTTAYTKYNMDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMCHGHIY 1135
            QTPQTPIVRT+ YTKYN+DE+PTGTNAIVAVLAYTGYDMEDAMILNKSSVERGM HG IY
Sbjct: 730  QTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQIY 789

Query: 1134 QLETVDLEDERGNSDHALKLFARSNTDKSMHSSIDSDGLPFVGQIVQPNEPYCSIYNTIS 955
            Q ET+DL D+   S  + K+F RSN D S+ S ID+DGLP+VGQ++QP+EPYCSIY+ ++
Sbjct: 790  QTETIDLSDQGNRSSRSQKMFRRSNIDTSVRSIIDADGLPYVGQMIQPDEPYCSIYDEVA 849

Query: 954  STTKPFALKGSEPVIVDYVAIDGKNHKKPLQKVNVRFRRSRNPVIGDKFSSRHGQKGVCS 775
             TT+   LKGSE VIVDYV++D KN   P QKVN+RFRR RNP+IGDKFSSRHGQKGVCS
Sbjct: 850  GTTRTMKLKGSEAVIVDYVSVDVKNKNNP-QKVNIRFRRPRNPMIGDKFSSRHGQKGVCS 908

Query: 774  QLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIGMLFESIAAKGGSLHGKFVDATPFASS 595
            QLWPD+DMPF G TGMRPDLIINPHAFPSRMTI ML ES+AAKGG L+G+FV+ATPF SS
Sbjct: 909  QLWPDVDMPFCGATGMRPDLIINPHAFPSRMTIAMLMESVAAKGGCLNGEFVNATPFRSS 968

Query: 594  I-KTANGEXXXXXXSLVDELGPMLTSHGFNYHGLEVLYSGVLGIEMPCEIFIGPVYYQRL 418
            + KT  G+      +LVDELG  L   GFNYHGLEVLYSGV G E+ CEIFIGPVYYQRL
Sbjct: 969  VNKTNAGDEETNGETLVDELGSTLIKKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRL 1028

Query: 417  RHMVSDKFQVRSTGTLDQVTRQPXXXXXXXXXXRFGEMERDAMLAHGAAYLLHDRLHTCS 238
            RHMVSDK+QVRSTGT+DQVTRQP          RFGEMERD+MLAHGA+YLLHDRLHTCS
Sbjct: 1029 RHMVSDKYQVRSTGTVDQVTRQPIKGRKKGGGIRFGEMERDSMLAHGASYLLHDRLHTCS 1088

Query: 237  DHHIADVCSLCGSILTTSFIQPQKRAVREIGGLPPGRIPKKVICHACKTSKGMETVAMPY 58
            DHHIADVCSLCGS+LT+SF+QP KRAVREIGGLPPG+ PK+V CHACKTSKGMETVAMPY
Sbjct: 1089 DHHIADVCSLCGSVLTSSFVQPPKRAVREIGGLPPGKAPKRVTCHACKTSKGMETVAMPY 1148

Query: 57   VFRYLAAELAAMNIKMTLK 1
            VF+YLAAELAAMNIKMTL+
Sbjct: 1149 VFKYLAAELAAMNIKMTLQ 1167


>ref|XP_003550091.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
            isoform X1 [Glycine max]
          Length = 1175

 Score = 1761 bits (4562), Expect = 0.0
 Identities = 853/1159 (73%), Positives = 991/1159 (85%)
 Frame = -3

Query: 3477 PDYKTLQDLIKPHIDSFDHFVDAGLETMLSQIRPIVVFEPYTKTKLQISFGEHELYPPQK 3298
            PD++ L++L K HI+SFD+  DAGLETML  I+PI VF+ +T TKL+I      LYPPQK
Sbjct: 9    PDFEALRELFKHHIESFDYMADAGLETMLRHIKPIEVFDDFTSTKLRIWLDNPVLYPPQK 68

Query: 3297 ERGVNSFREALYPHECREAKINYAGRFSVEVCFQYNDGPVVREKMNFGHLPIMLKSKVCH 3118
            ER   + REAL P ECR+AKI+YAG+ +++VCFQYNDGP++RE +NFG  PIML+SK+C+
Sbjct: 69   ERISRTMREALLPFECRQAKISYAGKITIDVCFQYNDGPIIRENINFGQFPIMLQSKLCN 128

Query: 3117 LRGADPQKLIFHKEEASEMGGYFILNGLERLFRLLIIPKRNYPMSVVRVSFRERQEGYTD 2938
            LRGADPQKL+ ++EEASEMGGYFILNGLER+ RLLI+PKRN+PMS+VR SF +R+EGYTD
Sbjct: 129  LRGADPQKLVSYREEASEMGGYFILNGLERVIRLLILPKRNHPMSMVRNSFSDRREGYTD 188

Query: 2937 KAVLIRCVRDDQSSISVKLYYLQNGSARLGFWIRGREYLLPVGVVLKALIDTNDHEIYVS 2758
            KA++IRCVR DQSS+SV+LYYL+NGSARLGFW+RGREYLLPVG++LKALIDT D EIYV+
Sbjct: 189  KAIVIRCVRADQSSLSVRLYYLRNGSARLGFWLRGREYLLPVGIILKALIDTTDREIYVN 248

Query: 2757 LTCCYSEKYQRGKGAVGTQLVGERVKIILDEVQALSLCTQLQCLQHLGAYFKPVMDGLET 2578
            LT CY+EKY++GKGAVGTQLVGER KIILDE++ LSL T+LQCL+++G +F+PV+  L+ 
Sbjct: 249  LTSCYNEKYEKGKGAVGTQLVGERAKIILDELRDLSLFTRLQCLEYIGEHFQPVITELKN 308

Query: 2577 ESHLAVGRAVLRDYVFVHLESNHDKFNLLIFMLQKLFALVDQTATPDNPDALQTQEVLLP 2398
            +S+  V  AVL+D + VHL++N DKFNLLIFMLQKLF+L+DQT+ PDNPD+LQ  EVLLP
Sbjct: 309  DSYPIVAEAVLKDCILVHLDNNFDKFNLLIFMLQKLFSLIDQTSVPDNPDSLQNHEVLLP 368

Query: 2397 GHLITIFLKEKLQEWLYKARRLLLEEIKNKGESFEFLSLAHIKKIIDKNPSKNISLTVEN 2218
            GHLIT++LKEKL++WL K +RLLL+EI  K + F+F  +  +KK++DKN  K +S  VEN
Sbjct: 369  GHLITLYLKEKLEDWLQKGKRLLLDEIDKKSKKFDFSDIVQVKKVMDKNSPKQVSTAVEN 428

Query: 2217 MLKTGNLVTQSGLDIQQRAGMTVHAERLNFLRFLSHFRAVHRGASFAGLRSTSVRKLLPE 2038
            MLKTG LVTQ+GLD+QQRAG TV AERLNFLRF+SHFRAVHRGASFAGLR+T+VRKLLPE
Sbjct: 429  MLKTGRLVTQTGLDLQQRAGYTVQAERLNFLRFVSHFRAVHRGASFAGLRTTTVRKLLPE 488

Query: 2037 AWGFLCPVHTPDGEPCGLLNHMTSTCRVTSHFDSQGNIKDFFKIRLSILSVLTGIGMTPS 1858
            +WGFLCPVHTPDGEPCGLLNHMT T R+TS FDSQGN+KD+FKI++SIL+VL  +GMTPS
Sbjct: 489  SWGFLCPVHTPDGEPCGLLNHMTCTSRITSFFDSQGNVKDYFKIKMSILNVLLEVGMTPS 548

Query: 1857 LPKLVRAGPPEVLAVLLDGRVXXXXXXXIVEKAVSYIRRLKLSESAGIPNDLEVGYVPLS 1678
            LPK+   GPPE L VLLDG V         EK V++IR LK+S +A IP+D+EVGYVPLS
Sbjct: 549  LPKIFLPGPPEALTVLLDGCVVGCIASSEAEKVVAHIRELKVSSAAVIPDDMEVGYVPLS 608

Query: 1677 MGGAYPGLYLFTSPSRFIRPVRNISIPSEEDLDIELIGPFEQVYMEIKCADGGDGGRKNI 1498
            MGGAYPGLYL TSPSRF+RPVRNISIPS    +IE IGPFEQV+MEI+C DGGDGGRK+ 
Sbjct: 609  MGGAYPGLYLCTSPSRFVRPVRNISIPSNGSENIEFIGPFEQVFMEIRCPDGGDGGRKSS 668

Query: 1497 FPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQAIQFRADQKLYH 1318
            FPATHEEIHPT +LSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQ IQ RADQKLYH
Sbjct: 669  FPATHEEIHPTVMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQTIQHRADQKLYH 728

Query: 1317 LQTPQTPIVRTTAYTKYNMDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMCHGHI 1138
            LQTPQTPIVRT+ YTKYN+DEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGM HG I
Sbjct: 729  LQTPQTPIVRTSTYTKYNIDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQI 788

Query: 1137 YQLETVDLEDERGNSDHALKLFARSNTDKSMHSSIDSDGLPFVGQIVQPNEPYCSIYNTI 958
            YQ ET+DL ++ G  D + ++F +SN +KS   SIDSDGLP VGQ+++P+EPYCSIYN +
Sbjct: 789  YQTETIDLTEQGGRLDRSSRMFRKSNLEKSACPSIDSDGLPHVGQMIRPDEPYCSIYNEV 848

Query: 957  SSTTKPFALKGSEPVIVDYVAIDGKNHKKPLQKVNVRFRRSRNPVIGDKFSSRHGQKGVC 778
            +S+      KGSE V VDYVA+D KN KK LQKVN+RFR  RNPVIGDKFSSRHGQKGVC
Sbjct: 849  TSSIHTLKRKGSEAVYVDYVAVDVKN-KKHLQKVNIRFRHPRNPVIGDKFSSRHGQKGVC 907

Query: 777  SQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIGMLFESIAAKGGSLHGKFVDATPFAS 598
            SQLWPD+DMPFSG TGMRPDLIINPHAFPSRMTI ML ES+AAKGGSL G+FVDATPF S
Sbjct: 908  SQLWPDVDMPFSGNTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLRGEFVDATPFRS 967

Query: 597  SIKTANGEXXXXXXSLVDELGPMLTSHGFNYHGLEVLYSGVLGIEMPCEIFIGPVYYQRL 418
            S+K  +GE      S+VD+LG +L   GFNYHGLEVLYSGV G E+ CEIFIGPVYYQRL
Sbjct: 968  SVKKDSGESDSMSGSIVDDLGLLLREKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRL 1027

Query: 417  RHMVSDKFQVRSTGTLDQVTRQPXXXXXXXXXXRFGEMERDAMLAHGAAYLLHDRLHTCS 238
            RHMVSDKFQVRSTGT+DQVTRQP          RFGEMERD++LAHGAAYLLHDRLHTCS
Sbjct: 1028 RHMVSDKFQVRSTGTIDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTCS 1087

Query: 237  DHHIADVCSLCGSILTTSFIQPQKRAVREIGGLPPGRIPKKVICHACKTSKGMETVAMPY 58
            D+HIADVCSLCGS+LTT+F QPQKR VREIGGLPPGR PKKV CHAC+TSKGMETVAMPY
Sbjct: 1088 DYHIADVCSLCGSMLTTTFTQPQKRPVREIGGLPPGRAPKKVTCHACQTSKGMETVAMPY 1147

Query: 57   VFRYLAAELAAMNIKMTLK 1
            VFRYLAAELAAMNIKMTLK
Sbjct: 1148 VFRYLAAELAAMNIKMTLK 1166


>ref|XP_004486057.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
            isoform X1 [Cicer arietinum]
            gi|502078798|ref|XP_004486058.1| PREDICTED: probable
            DNA-directed RNA polymerase I subunit RPA2-like isoform
            X2 [Cicer arietinum]
          Length = 1177

 Score = 1745 bits (4520), Expect = 0.0
 Identities = 847/1164 (72%), Positives = 988/1164 (84%)
 Frame = -3

Query: 3492 SNLPSPDYKTLQDLIKPHIDSFDHFVDAGLETMLSQIRPIVVFEPYTKTKLQISFGEHEL 3313
            S+L   ++  L+DL+KPHI+SFDH +DAGL+TM   I+P+ V  P   T L+IS    ++
Sbjct: 10   SSLDDANFDALRDLLKPHIESFDHMIDAGLKTMFIGIKPLEVPHPTQPTTLKISMDNPKI 69

Query: 3312 YPPQKERGVNSFREALYPHECREAKINYAGRFSVEVCFQYNDGPVVREKMNFGHLPIMLK 3133
            + PQKERG +  R  LYP ECR+AKI+Y G F+ E+CFQY++GP+VREK NFG  PIML+
Sbjct: 70   FEPQKERGFSKSRNILYPFECRQAKISYTGTFTAELCFQYDNGPIVREKFNFGQFPIMLQ 129

Query: 3132 SKVCHLRGADPQKLIFHKEEASEMGGYFILNGLERLFRLLIIPKRNYPMSVVRVSFRERQ 2953
            SK+C+LRGA P+KL+ +KEEASE+GGYFILNGLER+ RLLI+PKRNYPMS VR SF ER+
Sbjct: 130  SKLCNLRGASPKKLVSYKEEASEVGGYFILNGLERVMRLLIMPKRNYPMSTVRSSFSERR 189

Query: 2952 EGYTDKAVLIRCVRDDQSSISVKLYYLQNGSARLGFWIRGREYLLPVGVVLKALIDTNDH 2773
            EGYTDKAV+IRCVR DQ+S+S+KLYYL+NGSARLGFWI GREY+LPVG+VLKALIDT D 
Sbjct: 190  EGYTDKAVVIRCVRADQTSVSIKLYYLRNGSARLGFWILGREYMLPVGIVLKALIDTTDR 249

Query: 2772 EIYVSLTCCYSEKYQRGKGAVGTQLVGERVKIILDEVQALSLCTQLQCLQHLGAYFKPVM 2593
            EIYV+LT CY+EKY++GKGAVGTQLVGER KIILDEV+ LSL T+LQCLQ++G +F+P++
Sbjct: 250  EIYVNLTSCYNEKYEKGKGAVGTQLVGERAKIILDEVRDLSLFTRLQCLQYIGEHFQPIL 309

Query: 2592 DGLETESHLAVGRAVLRDYVFVHLESNHDKFNLLIFMLQKLFALVDQTATPDNPDALQTQ 2413
             GL+ ESH  V  AVLRDY+ VHL++N DKFNLLIFMLQKLF+L+DQT+ PDNPD+LQ Q
Sbjct: 310  QGLKNESHHIVADAVLRDYILVHLDNNFDKFNLLIFMLQKLFSLIDQTSVPDNPDSLQNQ 369

Query: 2412 EVLLPGHLITIFLKEKLQEWLYKARRLLLEEIKNKGESFEFLSLAHIKKIIDKNPSKNIS 2233
            EVLLPGHLIT++LKEKL+EWL K +RLLL+EI+ KG +FEF  +A +KK+++KN +K IS
Sbjct: 370  EVLLPGHLITLYLKEKLEEWLQKGKRLLLDEIEKKGATFEFGRIADVKKVLEKNHTKGIS 429

Query: 2232 LTVENMLKTGNLVTQSGLDIQQRAGMTVHAERLNFLRFLSHFRAVHRGASFAGLRSTSVR 2053
              +ENMLKTG LVT +GLD+ QRAG TV AER+NFLRF+SHFRAVHRG+SFAGLR+T+VR
Sbjct: 430  TAIENMLKTGRLVTTTGLDLHQRAGYTVQAERINFLRFISHFRAVHRGSSFAGLRTTTVR 489

Query: 2052 KLLPEAWGFLCPVHTPDGEPCGLLNHMTSTCRVTSHFDSQGNIKDFFKIRLSILSVLTGI 1873
            KLLPE+WGFLCPVHTPDGEPCGLLNHMT TCRVTS +DS+GNIKD+FKI+LSIL++L  I
Sbjct: 490  KLLPESWGFLCPVHTPDGEPCGLLNHMTRTCRVTSFYDSEGNIKDYFKIKLSILNILVEI 549

Query: 1872 GMTPSLPKLVRAGPPEVLAVLLDGRVXXXXXXXIVEKAVSYIRRLKLSESAGIPNDLEVG 1693
            GMT SLPK+   GPPEVL VLLDG +        VEK V++IR LK+S +A IPND+EVG
Sbjct: 550  GMTQSLPKIFLPGPPEVLTVLLDGCIVGFIPSTEVEKVVAHIRELKVSSAAVIPNDMEVG 609

Query: 1692 YVPLSMGGAYPGLYLFTSPSRFIRPVRNISIPSEEDLDIELIGPFEQVYMEIKCADGGDG 1513
            YVPLSMGGAYPGLYLFTSPSRF+RPVRN+SIPS  + ++ELIGPFEQV+MEI+C DGGDG
Sbjct: 610  YVPLSMGGAYPGLYLFTSPSRFVRPVRNLSIPSTNE-NVELIGPFEQVFMEIRCPDGGDG 668

Query: 1512 GRKNIFPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQAIQFRAD 1333
            GRK+ FPATHEEIHPTG+LSVV NLTPWSDHNQSPRNMYQCQMAKQTM FSSQ IQ RAD
Sbjct: 669  GRKSPFPATHEEIHPTGMLSVVGNLTPWSDHNQSPRNMYQCQMAKQTMGFSSQTIQHRAD 728

Query: 1332 QKLYHLQTPQTPIVRTTAYTKYNMDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGM 1153
            QKLYHLQTPQTPIVRT AY++Y++DE+P+GTNAIVAVLAYTGYDMEDAMILNKSSVERGM
Sbjct: 729  QKLYHLQTPQTPIVRTRAYSEYSIDEYPSGTNAIVAVLAYTGYDMEDAMILNKSSVERGM 788

Query: 1152 CHGHIYQLETVDLEDERGNSDHALKLFARSNTDKSMHSSIDSDGLPFVGQIVQPNEPYCS 973
             HG IYQ ET+DL ++ G SD + ++F +S  DK    SIDSDGLP VGQ++ P+EPYCS
Sbjct: 789  FHGQIYQTETIDLTEKGGKSDQSARVFRKSKLDKPC-PSIDSDGLPHVGQMIWPDEPYCS 847

Query: 972  IYNTISSTTKPFALKGSEPVIVDYVAIDGKNHKKPLQKVNVRFRRSRNPVIGDKFSSRHG 793
             YN +++ T  F  KGSEPV VDYVA+D K  KK L KVN+RFR  RNPVIGDKFSSRHG
Sbjct: 848  TYNEVTNKTYLFKKKGSEPVYVDYVAVDTKT-KKNLNKVNIRFRHPRNPVIGDKFSSRHG 906

Query: 792  QKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIGMLFESIAAKGGSLHGKFVDA 613
            QKGVCSQLWPDIDMPFSG TGMRPDLIINPHAFPSRMTI ML ES+AAKGGSLHGKF DA
Sbjct: 907  QKGVCSQLWPDIDMPFSGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKFKDA 966

Query: 612  TPFASSIKTANGEXXXXXXSLVDELGPMLTSHGFNYHGLEVLYSGVLGIEMPCEIFIGPV 433
            TPF SS+K  + E      SLVDELG ML   GFNYHG EVLYSGV G E+ CEIFIGPV
Sbjct: 967  TPFRSSVKKDDEESGSKSASLVDELGVMLKEKGFNYHGCEVLYSGVYGTELTCEIFIGPV 1026

Query: 432  YYQRLRHMVSDKFQVRSTGTLDQVTRQPXXXXXXXXXXRFGEMERDAMLAHGAAYLLHDR 253
            YYQRLRHMVSDK+QVRSTGT+DQVTRQP          RFGEMERD++LAHGAAYLLHDR
Sbjct: 1027 YYQRLRHMVSDKYQVRSTGTIDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDR 1086

Query: 252  LHTCSDHHIADVCSLCGSILTTSFIQPQKRAVREIGGLPPGRIPKKVICHACKTSKGMET 73
            LHTCSD+HIADVCS+CGS+LTT+F QP+KR VREIGGLPP R P+KV CHAC++SKGME 
Sbjct: 1087 LHTCSDYHIADVCSICGSMLTTTFQQPRKRPVREIGGLPPARAPRKVTCHACQSSKGMEK 1146

Query: 72   VAMPYVFRYLAAELAAMNIKMTLK 1
            VAMPY+FRYLAAELAAMNIKMTLK
Sbjct: 1147 VAMPYIFRYLAAELAAMNIKMTLK 1170


>ref|XP_007133696.1| hypothetical protein PHAVU_011G201300g [Phaseolus vulgaris]
            gi|561006696|gb|ESW05690.1| hypothetical protein
            PHAVU_011G201300g [Phaseolus vulgaris]
          Length = 1180

 Score = 1742 bits (4511), Expect = 0.0
 Identities = 849/1164 (72%), Positives = 988/1164 (84%), Gaps = 5/1164 (0%)
 Frame = -3

Query: 3477 PDYKTLQDLIKPHIDSFDHFVDAGLETMLSQIRPIVVFEPYTKTKLQISFGEHELYPPQK 3298
            PD++ L++L K HI+SFDH V AGLET L  I+PI V + +T TKL+I      +YPPQK
Sbjct: 9    PDFEALRELFKHHIESFDHMVKAGLETTLLHIKPIEVLDDFTTTKLRIWLENPVVYPPQK 68

Query: 3297 ERGVNSFREALYPHECREAKINYAGRFSVEVCFQYNDGPVVREKMNFGHLPIMLKSKVCH 3118
            ER   + REAL P ECR+AKI+YAG+ +++VCFQYNDGPV+RE +NFG  PIML+SK+C+
Sbjct: 69   ERISKTMREALLPFECRQAKISYAGKITIDVCFQYNDGPVIRENVNFGQFPIMLQSKLCN 128

Query: 3117 LRGADPQKLIFHKEEASEMGGYFILNGLERLFRLLIIPKRNYPMSVVRVSFRERQEGYTD 2938
            LRGADP+KL+  KEEASEMGGYFILNGLER+ RLLI+PKRNYPMS+VR SF +R+EGYTD
Sbjct: 129  LRGADPKKLVSCKEEASEMGGYFILNGLERVIRLLILPKRNYPMSMVRSSFCDRREGYTD 188

Query: 2937 KAVLIRCVRDDQSSISVKLYYLQNGSARLGFWIRGREYLLPVGVVLKALIDTNDHEIYVS 2758
            KAV+IRCVR DQSS+S++LYYL+NGSARLGFW+RGREYLLPVG+VLKALIDT D EIYV+
Sbjct: 189  KAVVIRCVRADQSSLSIRLYYLRNGSARLGFWLRGREYLLPVGIVLKALIDTTDREIYVN 248

Query: 2757 LTCCYSEKYQRGKGAVGTQLVGERVKIILDEVQALSLCTQLQCLQHLGAYFKPVMDGLET 2578
            LT CY+EKY +GKGAVGTQLVGER KIILDE++ LSL T+ QCL+++G +F+P+M  L  
Sbjct: 249  LTSCYNEKYAKGKGAVGTQLVGERAKIILDELRDLSLFTRRQCLEYIGEHFQPIMPELMK 308

Query: 2577 ESHLAVGRAVLRDYVFVHLESNHDKFNLLIFMLQKLFALVDQTATPDNPDALQTQEVLLP 2398
            +S+  V  AVL+D + VHL+++ DKFNLLIFMLQKLF+L+DQT+ PDNPD+LQ  EVLLP
Sbjct: 309  DSYAIVADAVLKDCILVHLDNDFDKFNLLIFMLQKLFSLIDQTSVPDNPDSLQNHEVLLP 368

Query: 2397 GHLITIFLKEKLQEWLYKARRLLLEEIKNKGESFEFLSLAHIKKIIDKNPSKNISLTVEN 2218
            GHLI++++KEKL++WL K ++LL++EI+ K   F+F  +A +KKI+DKN +K +S +VEN
Sbjct: 369  GHLISLYIKEKLEDWLQKGKKLLMDEIQKKSNKFDFSDIAQVKKIMDKNSAKLVSASVEN 428

Query: 2217 MLKTGNLVTQSGLDIQQRAGMTVHAERLNFLRFLSHFRAVHRGASFAGLRSTSVRKLLPE 2038
            +LKTG LVTQ+GLD+QQRAG TV AERLNFLRF+SHFRAVHRGASFAGLR+T+VRKLLPE
Sbjct: 429  LLKTGRLVTQTGLDLQQRAGYTVQAERLNFLRFMSHFRAVHRGASFAGLRTTTVRKLLPE 488

Query: 2037 AWGFLCPVHTPDGEPCGLLNHMTSTCRVTSHFDSQGNIKDFFKIRLSILSVLTGIGMTPS 1858
            +WGFLCPVHTPDGEPCGLLNHMT TCR+TS FDSQGNIKD+FKI+ SI  +L  +GMT S
Sbjct: 489  SWGFLCPVHTPDGEPCGLLNHMTRTCRITSFFDSQGNIKDYFKIQKSIRDILMEVGMTSS 548

Query: 1857 LPKLVRAGPPEVLAVLLDGRVXXXXXXXIVEKAVSYIRRLKLSESAGIPNDLEVGYVPLS 1678
            LPK+   GPPE L VLLDG V        VEK V+YIR LK+S ++ IP D+EVGYVPLS
Sbjct: 549  LPKIFLPGPPEALTVLLDGCVVGCIASSEVEKVVAYIRELKVSSASVIPGDMEVGYVPLS 608

Query: 1677 MGGAYPGLYLFTSPSRFIRPVRNISIPSEEDLDIELIGPFEQVYMEIKCADGGDGGRKNI 1498
            MGGAYPGLYLFTSPSRF+RPV+NISIPS     IELIGPFEQV+MEI+C DGGDGGRK+ 
Sbjct: 609  MGGAYPGLYLFTSPSRFVRPVKNISIPSNGSESIELIGPFEQVFMEIRCLDGGDGGRKSS 668

Query: 1497 FPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQAIQFRADQKLYH 1318
            FPATHEEIHPT +LSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQ IQ RADQKLYH
Sbjct: 669  FPATHEEIHPTEMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQTIQHRADQKLYH 728

Query: 1317 LQTPQTPIVRTTAYTKYNMDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMCHGHI 1138
            LQTPQTPIVRT+ YTKYN+DEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGM HG I
Sbjct: 729  LQTPQTPIVRTSTYTKYNIDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQI 788

Query: 1137 YQLETVDLEDERGNSDHALKLFARSNTDKSMHSSIDSDGLPFVGQIVQPNEPYCSIYNTI 958
            YQ ET+DL ++RG SD + ++F +SN +K    SIDSDGLP VGQ+++P+EPYCSIYN +
Sbjct: 789  YQTETIDLTEQRGKSDRSSRIFRKSNVEKLGCPSIDSDGLPHVGQMIRPDEPYCSIYNEV 848

Query: 957  SSTTKPFALKGSEPVIVDYVAIDGKNHKKPLQKVNVRFRRSRNPVIGDKFSSRHGQKGVC 778
            +S+T+ +  KGSE V VDYVA+D KN KK +QKVN+RFR  RNPVIGDKFSSRHGQKGVC
Sbjct: 849  TSSTQTYKRKGSEAVYVDYVAVDVKN-KKHIQKVNIRFRHPRNPVIGDKFSSRHGQKGVC 907

Query: 777  SQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIGMLFESIAAKGGSLHGKFVDATPFAS 598
            SQLWPD+DMPFSG TGMRPDLIINPHAFPSRMTI ML ES+AAKGGSL G+FVDATPF S
Sbjct: 908  SQLWPDVDMPFSGNTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLRGEFVDATPFRS 967

Query: 597  SIKTANGEXXXXXXSLVDELGPMLTSHGFNYHGLEVLYSGVLGIEMPCEIFIGPVYYQRL 418
            S K           SLVD+LG +L   GFNYHGLEVLYSGV G E+ CEIFIGPVYYQRL
Sbjct: 968  STKKDGEGSDSKSGSLVDDLGVLLKEKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRL 1027

Query: 417  RHMVSDKFQVRSTGTLDQVTRQPXXXXXXXXXXRFGEMERDAMLAHGAAYLLHDRLHTCS 238
            RHMVSDKFQVRSTGT+DQVTRQP          RFGEMERD++LAHGAAYLLHDRLHTCS
Sbjct: 1028 RHMVSDKFQVRSTGTIDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTCS 1087

Query: 237  DHHIADVCSLCGSILTTSFIQPQKRAVREIGGLPPGRIP-----KKVICHACKTSKGMET 73
            D+HIADVCSLCGS+L+T+FIQPQKR VR+IGGLPPGR+P     KKV CHAC+TSKGMET
Sbjct: 1088 DYHIADVCSLCGSMLSTTFIQPQKRPVRQIGGLPPGRLPPGRAAKKVSCHACQTSKGMET 1147

Query: 72   VAMPYVFRYLAAELAAMNIKMTLK 1
            VAMPYVFRYLAAELAAMNIKMTLK
Sbjct: 1148 VAMPYVFRYLAAELAAMNIKMTLK 1171


>ref|XP_006464287.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
            isoform X1 [Citrus sinensis]
          Length = 1175

 Score = 1738 bits (4501), Expect = 0.0
 Identities = 832/1163 (71%), Positives = 991/1163 (85%), Gaps = 3/1163 (0%)
 Frame = -3

Query: 3480 SPDYKTLQDLIKPHIDSFDHFVDAGLETMLSQIRPIVVFEPYTKTKLQISFGEHELYPPQ 3301
            S D++ L++L++ HI+SFD+ +D GL  M   ++ + V + +T  +L+IS G  E++PPQ
Sbjct: 6    SADFEPLRELVRHHIESFDYMLDEGLSEMFDHVKTVFVHDSFTNKRLKISVGNPEIFPPQ 65

Query: 3300 KERGVNSFREALYPHECREAKINYAGRFSVEVCFQYNDG--PVVREKMNFGHLPIMLKSK 3127
            KE+G  + R+AL P ECR+AKI+Y G+   +V FQY D   PVVRE+ NFG  P+MLK++
Sbjct: 66   KEQGSKTLRDALLPFECRQAKISYTGKLMADVEFQYLDAGSPVVRERFNFGQFPVMLKTR 125

Query: 3126 VCHLRGADPQKLIFHKEEASEMGGYFILNGLERLFRLLIIPKRNYPMSVVRVSFRERQEG 2947
             CHL+GAD QKL+  KEEA+EMGGYFILNGLER+FR +I+PK+NYPMS+VR SFR+R+EG
Sbjct: 126  RCHLQGADSQKLVSLKEEAAEMGGYFILNGLERVFRSVILPKQNYPMSMVRSSFRDRREG 185

Query: 2946 YTDKAVLIRCVRDDQSSISVKLYYLQNGSARLGFWIRGREYLLPVGVVLKALIDTNDHEI 2767
            YTDKAV+IRCVR DQSS+++KLYYL NGS RLGFW++G+EYLLPVG+VLKAL+DTND EI
Sbjct: 186  YTDKAVVIRCVRKDQSSVTLKLYYLLNGSVRLGFWLQGKEYLLPVGIVLKALVDTNDLEI 245

Query: 2766 YVSLTCCYSEKYQRGKGAVGTQLVGERVKIILDEVQALSLCTQLQCLQHLGAYFKPVMDG 2587
            +  LTCCY EKY++ KGAVG+ LV ERVKIIL EVQ LSL T+LQCLQH+G +F+PV+DG
Sbjct: 246  FNHLTCCYDEKYKKEKGAVGSPLVSERVKIILAEVQDLSLTTRLQCLQHIGEHFQPVIDG 305

Query: 2586 LETESHLAVGRAVLRDYVFVHLESNHDKFNLLIFMLQKLFALVDQTATPDNPDALQTQEV 2407
            L++ES+ AV   V+RDY+FVHL  N+DKFNLLIFMLQKLF+LVD T+  DNPD+LQ QE+
Sbjct: 306  LQSESYYAVAETVIRDYIFVHLNDNNDKFNLLIFMLQKLFSLVDHTSVSDNPDSLQNQEI 365

Query: 2406 LLPGHLITIFLKEKLQEWLYKARRLLLEEIKNKGESFEFLSLAHIKKIIDKNPSKNISLT 2227
            LLPGHLITI+LKEKL++WL K ++L+ +EI+N G+ F+F +LA+IKK+++KNPSK I  +
Sbjct: 366  LLPGHLITIYLKEKLEDWLRKGKKLIQDEIENNGKKFDFFNLANIKKVMEKNPSKQIGTS 425

Query: 2226 VENMLKTGNLVTQSGLDIQQRAGMTVHAERLNFLRFLSHFRAVHRGASFAGLRSTSVRKL 2047
            +E MLKTG L TQ+GLD+QQRAG TV AERLNFLRF+S FRAVHRGASFAGLR+TSVRKL
Sbjct: 426  IETMLKTGRLATQTGLDLQQRAGYTVQAERLNFLRFISFFRAVHRGASFAGLRTTSVRKL 485

Query: 2046 LPEAWGFLCPVHTPDGEPCGLLNHMTSTCRVTSHFDSQGNIKDFFKIRLSILSVLTGIGM 1867
            LPE+WGFLCPVHTPDGEPCGLLNHMTSTCRV S++DS+GNI+DF K+R SIL VL G+GM
Sbjct: 486  LPESWGFLCPVHTPDGEPCGLLNHMTSTCRVASYYDSRGNIRDFSKMRTSILRVLIGVGM 545

Query: 1866 TPSLPKLVRAGPPEVLAVLLDGRVXXXXXXXIVEKAVSYIRRLKLSESAGIPNDLEVGYV 1687
             PSLPKLV++GPP VL+VLLDGRV        +EK V+++RRLK+S ++ IP+DLEVGYV
Sbjct: 546  IPSLPKLVKSGPPAVLSVLLDGRVVGVIPSSEIEKVVAHLRRLKVSAASVIPDDLEVGYV 605

Query: 1686 PLSMGGAYPGLYLFTSPSRFIRPVRNISIPSEEDLDIELIGPFEQVYMEIKCADGGDGGR 1507
            PLS+GGAYPGLYLFTSP +F+RPVRNIS+PSEE  +IELIGPFEQV+MEI+C DGGDGGR
Sbjct: 606  PLSLGGAYPGLYLFTSPPKFVRPVRNISLPSEESQNIELIGPFEQVFMEIRCPDGGDGGR 665

Query: 1506 KNIFPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQAIQFRADQK 1327
            +N FPATHEEIHPTG+LSVVANLTP+SDHNQSPRNMYQCQMAKQTM FS QA++FRADQK
Sbjct: 666  RNAFPATHEEIHPTGMLSVVANLTPYSDHNQSPRNMYQCQMAKQTMGFSVQALKFRADQK 725

Query: 1326 LYHLQTPQTPIVRTTAYTKYNMDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMCH 1147
            LYHLQTPQTPIVRT  YTKY++DE+PTGTNAIVAVLAYTGYDMEDAMILNKSSV+RGMCH
Sbjct: 726  LYHLQTPQTPIVRTNTYTKYSIDEYPTGTNAIVAVLAYTGYDMEDAMILNKSSVDRGMCH 785

Query: 1146 GHIYQLETVDLEDERGNSDHALKLFARSNTDKSMHSSIDSDGLPFVGQIVQPNEPYCSIY 967
            G IYQ ET+DL D+    D   KLF R+   KS+HS IDSDGLP+VGQ++ P EPYCSIY
Sbjct: 786  GQIYQTETIDLSDDGNKVDRGQKLFRRNKDAKSLHSVIDSDGLPYVGQMIHPGEPYCSIY 845

Query: 966  NTISSTTKPFALKGSEPVIVDYVAIDGKNHKKPLQKVNVRFRRSRNPVIGDKFSSRHGQK 787
            +  +++ +  + KGSE V VDYVA+D KN K   QK N+RFR +RNP+IGDKFSSRHGQK
Sbjct: 846  DKTTNSWRTNSRKGSESVFVDYVAVDMKNSKNLPQKANIRFRHTRNPIIGDKFSSRHGQK 905

Query: 786  GVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIGMLFESIAAKGGSLHGKFVDATP 607
            GVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTI ML ES+AAKGGSLHGKF+DATP
Sbjct: 906  GVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKFMDATP 965

Query: 606  FASSIKTANGE-XXXXXXSLVDELGPMLTSHGFNYHGLEVLYSGVLGIEMPCEIFIGPVY 430
            FA+S+K  NG+       SLVDELG ML + GFNYHG+EVLYSGV G E+ CEIFIGPVY
Sbjct: 966  FANSVKKTNGDTGTDESKSLVDELGEMLRTCGFNYHGVEVLYSGVYGTELTCEIFIGPVY 1025

Query: 429  YQRLRHMVSDKFQVRSTGTLDQVTRQPXXXXXXXXXXRFGEMERDAMLAHGAAYLLHDRL 250
            YQRLRHMVSDKFQVRSTGT+DQ+TRQP          RFGEMERD++LAHGAAYLLHDRL
Sbjct: 1026 YQRLRHMVSDKFQVRSTGTMDQITRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRL 1085

Query: 249  HTCSDHHIADVCSLCGSILTTSFIQPQKRAVREIGGLPPGRIPKKVICHACKTSKGMETV 70
            HTCSD+H+ADVCSLCGS+LT +FI PQKRA+REIGGLPP R PKKV CHAC+TSKGMETV
Sbjct: 1086 HTCSDYHVADVCSLCGSVLTATFIHPQKRAIREIGGLPPARAPKKVTCHACQTSKGMETV 1145

Query: 69   AMPYVFRYLAAELAAMNIKMTLK 1
            AMPYVFRYLAAELAAMNIK+TL+
Sbjct: 1146 AMPYVFRYLAAELAAMNIKITLQ 1168


>ref|XP_004229596.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Solanum
            lycopersicum]
          Length = 1184

 Score = 1734 bits (4491), Expect = 0.0
 Identities = 842/1159 (72%), Positives = 981/1159 (84%), Gaps = 1/1159 (0%)
 Frame = -3

Query: 3474 DYKTLQDLIKPHIDSFDHFVDAGLETMLSQIRPIVVFEPYTKTKLQISFGEHELYPPQKE 3295
            DY  L++L   HI+SFD+ VD GLETML  I+PI + + ++  KL+I FG+ EL+PPQKE
Sbjct: 24   DYSALKELFSHHIESFDYMVDNGLETMLLNIKPIEIVDSFSSLKLRIWFGKPELFPPQKE 83

Query: 3294 RGVNSFREALYPHECREAKINYAGRFSVEVCFQYNDGPVVREKMNFGHLPIMLKSKVCHL 3115
            R   +  +ALYP ECR+AKI+Y+G+F V++CFQY DG V+REK NFG  PIMLKSK+CHL
Sbjct: 84   RASKAMHDALYPFECRQAKISYSGKFLVDICFQYGDGAVIREKFNFGQFPIMLKSKLCHL 143

Query: 3114 RGADP-QKLIFHKEEASEMGGYFILNGLERLFRLLIIPKRNYPMSVVRVSFRERQEGYTD 2938
            RGAD  +KL+ +KEE SEMGGYFIL GLER+ RL+I+PKRNYP S+ R SFR+R+EGY+D
Sbjct: 144  RGADDSKKLVAYKEEPSEMGGYFILKGLERVIRLIILPKRNYPTSMARNSFRDRREGYSD 203

Query: 2937 KAVLIRCVRDDQSSISVKLYYLQNGSARLGFWIRGREYLLPVGVVLKALIDTNDHEIYVS 2758
            KAV+IRCVR+DQS++S+KLYYL NGSARLGFWI+GREYLLPVG++LKAL+DT DHEIYV+
Sbjct: 204  KAVVIRCVREDQSAVSLKLYYLNNGSARLGFWIQGREYLLPVGIILKALVDTTDHEIYVN 263

Query: 2757 LTCCYSEKYQRGKGAVGTQLVGERVKIILDEVQALSLCTQLQCLQHLGAYFKPVMDGLET 2578
            LTCCY+E+  R KG+VGTQLVGER KIILDEVQALSL T+ QCL+H+G +F+PV+ G++ 
Sbjct: 264  LTCCYNEECDRVKGSVGTQLVGERAKIILDEVQALSLFTRAQCLRHIGEHFQPVVIGMQN 323

Query: 2577 ESHLAVGRAVLRDYVFVHLESNHDKFNLLIFMLQKLFALVDQTATPDNPDALQTQEVLLP 2398
            +S+  V  AVLRDY+FVHL++NHDKFNLLIFMLQKLF+L+DQT+  DNPD+LQ QEVLLP
Sbjct: 324  DSYKTVADAVLRDYIFVHLDNNHDKFNLLIFMLQKLFSLIDQTSVLDNPDSLQNQEVLLP 383

Query: 2397 GHLITIFLKEKLQEWLYKARRLLLEEIKNKGESFEFLSLAHIKKIIDKNPSKNISLTVEN 2218
            GHLITI+LKEKLQ+WL K +R L EE   + + FE  SL  +KK I+KN  K I LT+E+
Sbjct: 384  GHLITIYLKEKLQDWLLKLQRSLQEETDGEKKKFELSSLTDVKKAIEKNAPKQIGLTIES 443

Query: 2217 MLKTGNLVTQSGLDIQQRAGMTVHAERLNFLRFLSHFRAVHRGASFAGLRSTSVRKLLPE 2038
            MLKTG L TQSGLD+QQRAGMTV AE+LNFLRFLSHFRAVHRGASFAGLR+TSVRKLLPE
Sbjct: 444  MLKTGRLATQSGLDLQQRAGMTVQAEKLNFLRFLSHFRAVHRGASFAGLRTTSVRKLLPE 503

Query: 2037 AWGFLCPVHTPDGEPCGLLNHMTSTCRVTSHFDSQGNIKDFFKIRLSILSVLTGIGMTPS 1858
            +WGFLCPVHTPDGEPCGLLNHMT++CR+TS++DS+GN+KDFFK+R+SIL+VL  IGMTPS
Sbjct: 504  SWGFLCPVHTPDGEPCGLLNHMTASCRITSYYDSKGNVKDFFKMRMSILNVLIAIGMTPS 563

Query: 1857 LPKLVRAGPPEVLAVLLDGRVXXXXXXXIVEKAVSYIRRLKLSESAGIPNDLEVGYVPLS 1678
             PKLV+AGPPE+L+VLLDGR+       ++EKAV+++RRLKLS ++ IP DLEVGY+PLS
Sbjct: 564  SPKLVQAGPPELLSVLLDGRIAGYIPSDLIEKAVTHLRRLKLSSTSSIPVDLEVGYIPLS 623

Query: 1677 MGGAYPGLYLFTSPSRFIRPVRNISIPSEEDLDIELIGPFEQVYMEIKCADGGDGGRKNI 1498
            M GAYPGLYLFTSPSRF+RPVRNIS P+EE  D+ELIGPFEQVYMEI C DGGDGGRK +
Sbjct: 624  MNGAYPGLYLFTSPSRFVRPVRNISAPAEEGNDLELIGPFEQVYMEISCPDGGDGGRKTL 683

Query: 1497 FPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQAIQFRADQKLYH 1318
            FPATH EIHPT ILSVV NLTPWSDHNQSPRNMYQCQM KQTM FSSQA+  RADQKLYH
Sbjct: 684  FPATHREIHPTNILSVVGNLTPWSDHNQSPRNMYQCQMGKQTMGFSSQALNCRADQKLYH 743

Query: 1317 LQTPQTPIVRTTAYTKYNMDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMCHGHI 1138
            LQTPQTPIVRT AY KY +D++P GTNAIVAVLAY+GYDMEDAM+LNKSSV+RGMCHGHI
Sbjct: 744  LQTPQTPIVRTKAYEKYCVDDYPLGTNAIVAVLAYSGYDMEDAMVLNKSSVDRGMCHGHI 803

Query: 1137 YQLETVDLEDERGNSDHALKLFARSNTDKSMHSSIDSDGLPFVGQIVQPNEPYCSIYNTI 958
            YQ ET+DL ++   SD A +LF RSN DKS H  IDSDGLP+VGQ + PNEPYCSIYN I
Sbjct: 804  YQTETIDLTEQSAKSDRAQRLFRRSNLDKSSHQLIDSDGLPYVGQRINPNEPYCSIYNEI 863

Query: 957  SSTTKPFALKGSEPVIVDYVAIDGKNHKKPLQKVNVRFRRSRNPVIGDKFSSRHGQKGVC 778
            +S T    LKGSEPV+VDYVA+D KN K  LQK N+RFRRSRNPVIGDKFSSRHGQKGVC
Sbjct: 864  TSQTTCMKLKGSEPVVVDYVAVDVKN-KAHLQKANIRFRRSRNPVIGDKFSSRHGQKGVC 922

Query: 777  SQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIGMLFESIAAKGGSLHGKFVDATPFAS 598
            SQLWPD+DMPFS VTGMRPDLIINPHAFPSRMTI ML ESIAAKGG+LHGKFVDATPF++
Sbjct: 923  SQLWPDVDMPFSAVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGALHGKFVDATPFSN 982

Query: 597  SIKTANGEXXXXXXSLVDELGPMLTSHGFNYHGLEVLYSGVLGIEMPCEIFIGPVYYQRL 418
            ++K +  E      SLVD+LG ML   GFN+HG EVLYSGV G E+ C IFIGPVYYQRL
Sbjct: 983  TMKESESE----SSSLVDDLGSMLAVCGFNHHGTEVLYSGVYGTELTCRIFIGPVYYQRL 1038

Query: 417  RHMVSDKFQVRSTGTLDQVTRQPXXXXXXXXXXRFGEMERDAMLAHGAAYLLHDRLHTCS 238
            RHMVSDKFQVRSTG +D +TRQP          RFGEMERD++LAHGA+YLLHDRLHT S
Sbjct: 1039 RHMVSDKFQVRSTGQVDHITRQPIKGRKRGGGVRFGEMERDSLLAHGASYLLHDRLHTSS 1098

Query: 237  DHHIADVCSLCGSILTTSFIQPQKRAVREIGGLPPGRIPKKVICHACKTSKGMETVAMPY 58
            DHHIADVCS CGS+LT+S IQP KRAV+ I    P R PKKV C AC++SKGMETVAMPY
Sbjct: 1099 DHHIADVCSECGSVLTSSVIQPPKRAVQAILKQLPAREPKKVTCVACRSSKGMETVAMPY 1158

Query: 57   VFRYLAAELAAMNIKMTLK 1
            VF+YLAAELAAMNIKMTLK
Sbjct: 1159 VFKYLAAELAAMNIKMTLK 1177


>ref|XP_006366498.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
            [Solanum tuberosum]
          Length = 1179

 Score = 1727 bits (4472), Expect = 0.0
 Identities = 838/1159 (72%), Positives = 977/1159 (84%), Gaps = 1/1159 (0%)
 Frame = -3

Query: 3474 DYKTLQDLIKPHIDSFDHFVDAGLETMLSQIRPIVVFEPYTKTKLQISFGEHELYPPQKE 3295
            DY  L++L   HI+SFD+ VD GLETML  I+PI + + ++  KL+I FG+ EL+PPQKE
Sbjct: 19   DYSALKELFSHHIESFDYMVDNGLETMLLNIKPIEIVDSFSSLKLRIWFGKPELFPPQKE 78

Query: 3294 RGVNSFREALYPHECREAKINYAGRFSVEVCFQYNDGPVVREKMNFGHLPIMLKSKVCHL 3115
            R   +  +ALYP ECR+AK++Y G+F V++CFQY DG V+REK NFG  PIMLKSK+CHL
Sbjct: 79   RASKTMHDALYPFECRQAKLSYTGKFLVDICFQYGDGAVIREKFNFGQFPIMLKSKLCHL 138

Query: 3114 RGADP-QKLIFHKEEASEMGGYFILNGLERLFRLLIIPKRNYPMSVVRVSFRERQEGYTD 2938
            RGAD  +KLI +KEE SEMGGYFIL GLER+ RL+I+PKRNYP S+ R SFR+R+EGY+D
Sbjct: 139  RGADDSRKLIAYKEEPSEMGGYFILKGLERVIRLIILPKRNYPTSMARNSFRDRREGYSD 198

Query: 2937 KAVLIRCVRDDQSSISVKLYYLQNGSARLGFWIRGREYLLPVGVVLKALIDTNDHEIYVS 2758
            KAV+IRCVR+DQS++S+KLYYL NGSARLGFWI+GREYLLPVG++LKAL+DT DHEIYV+
Sbjct: 199  KAVVIRCVREDQSAVSLKLYYLNNGSARLGFWIQGREYLLPVGIILKALVDTTDHEIYVN 258

Query: 2757 LTCCYSEKYQRGKGAVGTQLVGERVKIILDEVQALSLCTQLQCLQHLGAYFKPVMDGLET 2578
            LTCCY+E+  R KG+VGTQLVGER KIILDEVQALSL T+ QCL+H+G +F+PV+ G++ 
Sbjct: 259  LTCCYNEECDRVKGSVGTQLVGERAKIILDEVQALSLFTRAQCLRHIGEHFQPVVIGMQN 318

Query: 2577 ESHLAVGRAVLRDYVFVHLESNHDKFNLLIFMLQKLFALVDQTATPDNPDALQTQEVLLP 2398
            +S+  V  AVLRDY+FVHL++NHDKFNLLIFMLQKLF+L+DQT+  DNPD+LQ QEVLLP
Sbjct: 319  DSYKTVADAVLRDYIFVHLDNNHDKFNLLIFMLQKLFSLIDQTSVLDNPDSLQNQEVLLP 378

Query: 2397 GHLITIFLKEKLQEWLYKARRLLLEEIKNKGESFEFLSLAHIKKIIDKNPSKNISLTVEN 2218
            GHLITI+LKEKLQ+WL K +R L EE   + + FE  SL  +KK I+KN  K I L +E+
Sbjct: 379  GHLITIYLKEKLQDWLLKLQRSLQEETDGEKKKFELSSLTDVKKAIEKNAPKQIGLAIES 438

Query: 2217 MLKTGNLVTQSGLDIQQRAGMTVHAERLNFLRFLSHFRAVHRGASFAGLRSTSVRKLLPE 2038
            MLKTG L TQSGLD+QQRAGMTV AE+LNFLRFLSHFRAVHRGASFAGLR+TSVRKLLPE
Sbjct: 439  MLKTGRLATQSGLDLQQRAGMTVQAEKLNFLRFLSHFRAVHRGASFAGLRTTSVRKLLPE 498

Query: 2037 AWGFLCPVHTPDGEPCGLLNHMTSTCRVTSHFDSQGNIKDFFKIRLSILSVLTGIGMTPS 1858
            +WGFLCPVHTPDGEPCGLLNHMT++CR+TS++DS+GN+KDFFK+R+SIL+VL  IGMTP 
Sbjct: 499  SWGFLCPVHTPDGEPCGLLNHMTASCRITSYYDSKGNVKDFFKMRMSILNVLIAIGMTPP 558

Query: 1857 LPKLVRAGPPEVLAVLLDGRVXXXXXXXIVEKAVSYIRRLKLSESAGIPNDLEVGYVPLS 1678
             PKLV+ GPPE+L+VLLDGR+       ++EKAV+++RRLKLS ++ IP DLEVGY+PLS
Sbjct: 559  SPKLVQGGPPELLSVLLDGRIAGYIPSDLIEKAVTHLRRLKLSSTSSIPVDLEVGYIPLS 618

Query: 1677 MGGAYPGLYLFTSPSRFIRPVRNISIPSEEDLDIELIGPFEQVYMEIKCADGGDGGRKNI 1498
            M GAYPGLYLFTSPSRF+RPVRNIS P+EE  D+EL+GPFEQVYMEI C DGGDGGRK +
Sbjct: 619  MNGAYPGLYLFTSPSRFVRPVRNISAPAEEGNDLELVGPFEQVYMEISCPDGGDGGRKTL 678

Query: 1497 FPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQAIQFRADQKLYH 1318
            FPATH EIHPT ILSVV NLTPWSDHNQSPRNMYQCQM KQTM FSSQA+  RADQKLYH
Sbjct: 679  FPATHREIHPTNILSVVGNLTPWSDHNQSPRNMYQCQMGKQTMGFSSQALNCRADQKLYH 738

Query: 1317 LQTPQTPIVRTTAYTKYNMDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMCHGHI 1138
            LQTPQTPIVRT AY KY +D++P GTNAIVAVLAY+GYDMEDAM+LNKSSV+RGMCHGHI
Sbjct: 739  LQTPQTPIVRTKAYEKYCVDDYPLGTNAIVAVLAYSGYDMEDAMVLNKSSVDRGMCHGHI 798

Query: 1137 YQLETVDLEDERGNSDHALKLFARSNTDKSMHSSIDSDGLPFVGQIVQPNEPYCSIYNTI 958
            YQ ET+DL ++   SD A +LF RSN DKS H  ID+DGLP+VGQ + PNEPYCSIYN I
Sbjct: 799  YQTETIDLTEQSAKSDRAQRLFRRSNLDKSSHQLIDTDGLPYVGQRINPNEPYCSIYNEI 858

Query: 957  SSTTKPFALKGSEPVIVDYVAIDGKNHKKPLQKVNVRFRRSRNPVIGDKFSSRHGQKGVC 778
            +S T    LKGSEPV+VDYVA+D KN K  LQK N+RFRRSRNPVIGDKFSSRHGQKGVC
Sbjct: 859  TSQTTSMKLKGSEPVVVDYVAVDVKN-KTHLQKANIRFRRSRNPVIGDKFSSRHGQKGVC 917

Query: 777  SQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIGMLFESIAAKGGSLHGKFVDATPFAS 598
            SQLWPD+DMPFS VTGMRPDLIINPHAFPSRMTI ML ESIAAKGG+LHGKFVDATPF++
Sbjct: 918  SQLWPDVDMPFSAVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGALHGKFVDATPFSN 977

Query: 597  SIKTANGEXXXXXXSLVDELGPMLTSHGFNYHGLEVLYSGVLGIEMPCEIFIGPVYYQRL 418
            ++K +  E      SLVD+LG ML   GFN+HG EVLYSGV G E+ C IFIGPVYYQRL
Sbjct: 978  TMKESESE----SSSLVDDLGSMLAVCGFNHHGTEVLYSGVYGTELTCLIFIGPVYYQRL 1033

Query: 417  RHMVSDKFQVRSTGTLDQVTRQPXXXXXXXXXXRFGEMERDAMLAHGAAYLLHDRLHTCS 238
            RHMVSDKFQVRSTG +D +TRQP          RFGEMERD++LAHGAAYLLHDRLHT S
Sbjct: 1034 RHMVSDKFQVRSTGQVDHITRQPIKGRKRGGGVRFGEMERDSLLAHGAAYLLHDRLHTSS 1093

Query: 237  DHHIADVCSLCGSILTTSFIQPQKRAVREIGGLPPGRIPKKVICHACKTSKGMETVAMPY 58
            DHHIADVCS CGS+LT+S IQP KRAV+ I    P R PKKV C AC++SKGMETVAMPY
Sbjct: 1094 DHHIADVCSECGSVLTSSVIQPPKRAVQVILKQLPAREPKKVTCVACRSSKGMETVAMPY 1153

Query: 57   VFRYLAAELAAMNIKMTLK 1
            VF+YLAAELAAMNIKMTLK
Sbjct: 1154 VFKYLAAELAAMNIKMTLK 1172


>ref|XP_007010837.1| Nuclear RNA polymerase A2 isoform 2 [Theobroma cacao]
            gi|508727750|gb|EOY19647.1| Nuclear RNA polymerase A2
            isoform 2 [Theobroma cacao]
          Length = 1180

 Score = 1724 bits (4464), Expect = 0.0
 Identities = 828/1158 (71%), Positives = 977/1158 (84%)
 Frame = -3

Query: 3474 DYKTLQDLIKPHIDSFDHFVDAGLETMLSQIRPIVVFEPYTKTKLQISFGEHELYPPQKE 3295
            + + L++L K HI+SFD+ +D GL+ ML +++P+ +F+  +   L+I     E+YPPQK+
Sbjct: 17   ELEELKELFKHHIESFDYMIDEGLDLMLKRVKPVQIFDSSSNKTLRIWLDHPEVYPPQKD 76

Query: 3294 RGVNSFREALYPHECREAKINYAGRFSVEVCFQYNDGPVVREKMNFGHLPIMLKSKVCHL 3115
            R   +   ALYP ECR+AKI+Y G F ++VCFQ++ G VVREK+NFG  PIMLKSK C+L
Sbjct: 77   RSSKTSAGALYPFECRQAKISYTGSFHIDVCFQWDGGVVVREKLNFGEFPIMLKSKRCYL 136

Query: 3114 RGADPQKLIFHKEEASEMGGYFILNGLERLFRLLIIPKRNYPMSVVRVSFRERQEGYTDK 2935
            R ADP+KL+  KEE+ EMGGYFILNGLER+ RLLI+PKRNYPMS+VR SFR+R+EGYTDK
Sbjct: 137  READPRKLVACKEESREMGGYFILNGLERVVRLLILPKRNYPMSLVRNSFRDRREGYTDK 196

Query: 2934 AVLIRCVRDDQSSISVKLYYLQNGSARLGFWIRGREYLLPVGVVLKALIDTNDHEIYVSL 2755
            AV+IRCVR D SS++VKLYYL NGSARLGFW++GREY+LPVG++LKALIDTND EIY  L
Sbjct: 197  AVVIRCVRGDLSSVTVKLYYLHNGSARLGFWVQGREYMLPVGIILKALIDTNDREIYTKL 256

Query: 2754 TCCYSEKYQRGKGAVGTQLVGERVKIILDEVQALSLCTQLQCLQHLGAYFKPVMDGLETE 2575
            TCCY+EK   GKGAVGTQLVGER KIILDEVQ L+L TQ QCLQH+G +F+P+M+G+E+E
Sbjct: 257  TCCYNEKNGEGKGAVGTQLVGERAKIILDEVQHLALFTQEQCLQHIGEHFQPIMEGMESE 316

Query: 2574 SHLAVGRAVLRDYVFVHLESNHDKFNLLIFMLQKLFALVDQTATPDNPDALQTQEVLLPG 2395
            S+  V   VLR+Y+FVHL+ N+DKFNLLIFM+QKLF+L+DQT+ PDN D+LQ QEVLLPG
Sbjct: 317  SYSTVADVVLRNYIFVHLDDNNDKFNLLIFMVQKLFSLIDQTSAPDNSDSLQNQEVLLPG 376

Query: 2394 HLITIFLKEKLQEWLYKARRLLLEEIKNKGESFEFLSLAHIKKIIDKNPSKNISLTVENM 2215
            HLITI+LKEKL++WL K ++L+ + I NK ++F+F S+  +KK+++KN    +S  +EN+
Sbjct: 377  HLITIYLKEKLEDWLRKGKKLIEDAINNKSKNFDFCSMKDVKKVMEKNRPTQVSAAIENL 436

Query: 2214 LKTGNLVTQSGLDIQQRAGMTVHAERLNFLRFLSHFRAVHRGASFAGLRSTSVRKLLPEA 2035
            LKTG L+TQ+GLD+QQRAG TV AERLN+ RFLS FR VHRGASFAGLR+TSVRKLLPE+
Sbjct: 437  LKTGRLITQTGLDLQQRAGFTVQAERLNYHRFLSFFRCVHRGASFAGLRTTSVRKLLPES 496

Query: 2034 WGFLCPVHTPDGEPCGLLNHMTSTCRVTSHFDSQGNIKDFFKIRLSILSVLTGIGMTPSL 1855
            WGFLCPVHTPDGEPCGLLNHMT TCR+TS+++S GNI+DFFKIR+SIL VL G+GMT S 
Sbjct: 497  WGFLCPVHTPDGEPCGLLNHMTCTCRITSYYNSPGNIRDFFKIRMSILDVLVGVGMTTSW 556

Query: 1854 PKLVRAGPPEVLAVLLDGRVXXXXXXXIVEKAVSYIRRLKLSESAGIPNDLEVGYVPLSM 1675
            PK+  AGPP+VL VLLDGRV         EK V+++RRLKL+ ++ IP+DLEVGYVPLS+
Sbjct: 557  PKVDHAGPPQVLPVLLDGRVVGSLPSGEAEKVVAHLRRLKLAAASVIPDDLEVGYVPLSL 616

Query: 1674 GGAYPGLYLFTSPSRFIRPVRNISIPSEEDLDIELIGPFEQVYMEIKCADGGDGGRKNIF 1495
            GG YPGLYLFTSPSRF+RPVRNISIPS +  DIELIGPFEQV+MEI+C DGG+GGR NIF
Sbjct: 617  GGTYPGLYLFTSPSRFVRPVRNISIPSADGKDIELIGPFEQVFMEIRCPDGGNGGRSNIF 676

Query: 1494 PATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQAIQFRADQKLYHL 1315
            PATHEEI PT +LSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFS QAI  RADQKLYHL
Sbjct: 677  PATHEEISPTAMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAINARADQKLYHL 736

Query: 1314 QTPQTPIVRTTAYTKYNMDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMCHGHIY 1135
            QTPQTPIVRT  YTKY MDE+P+GTNAIVAVLAYTGYDMEDAMILNKSSVERGMCHG IY
Sbjct: 737  QTPQTPIVRTKTYTKYCMDEYPSGTNAIVAVLAYTGYDMEDAMILNKSSVERGMCHGQIY 796

Query: 1134 QLETVDLEDERGNSDHALKLFARSNTDKSMHSSIDSDGLPFVGQIVQPNEPYCSIYNTIS 955
            Q ET+DL D++  SD   ++F R ++D+S+ S +DSDGLP VGQ+++PNEPYCS  N ++
Sbjct: 797  QTETIDLGDDKSKSDRGQRIFKREHSDRSISSCLDSDGLPHVGQVIRPNEPYCSTINQVT 856

Query: 954  STTKPFALKGSEPVIVDYVAIDGKNHKKPLQKVNVRFRRSRNPVIGDKFSSRHGQKGVCS 775
            ++ + +  KGSE VIVDYVA+D K+ KK LQK N+RFR  RNPVIGDKFSSRHGQKGVCS
Sbjct: 857  NSKRLYNHKGSETVIVDYVAVDTKS-KKHLQKANIRFRHPRNPVIGDKFSSRHGQKGVCS 915

Query: 774  QLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIGMLFESIAAKGGSLHGKFVDATPFASS 595
            QLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTI ML ES+AAKGGSLHGKFVDATPF+ S
Sbjct: 916  QLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKFVDATPFSDS 975

Query: 594  IKTANGEXXXXXXSLVDELGPMLTSHGFNYHGLEVLYSGVLGIEMPCEIFIGPVYYQRLR 415
            +K A G+      SLVDELG ML + GFNYHG+EVLYSGV G E+ CEIFIGPVYYQRLR
Sbjct: 976  VKEAKGKTEAESESLVDELGSMLRARGFNYHGVEVLYSGVYGTELTCEIFIGPVYYQRLR 1035

Query: 414  HMVSDKFQVRSTGTLDQVTRQPXXXXXXXXXXRFGEMERDAMLAHGAAYLLHDRLHTCSD 235
            HMVSDK+QVR+TG +DQ+TRQP          RFGEMERDAMLAHGAAYLLHDRLHTCSD
Sbjct: 1036 HMVSDKYQVRATGQVDQITRQPIKGRKRGGGIRFGEMERDAMLAHGAAYLLHDRLHTCSD 1095

Query: 234  HHIADVCSLCGSILTTSFIQPQKRAVREIGGLPPGRIPKKVICHACKTSKGMETVAMPYV 55
            +HIADVCSLCGSILTTS +QP KR VREIGGLPP R PKKV CHAC+TSKGMETVAMPYV
Sbjct: 1096 YHIADVCSLCGSILTTSIVQPPKRVVREIGGLPPARAPKKVTCHACQTSKGMETVAMPYV 1155

Query: 54   FRYLAAELAAMNIKMTLK 1
            FRYLAAELAAMNI MT++
Sbjct: 1156 FRYLAAELAAMNITMTIQ 1173


>ref|XP_002529996.1| DNA-directed RNA polymerase I subunit, putative [Ricinus communis]
            gi|223530519|gb|EEF32401.1| DNA-directed RNA polymerase I
            subunit, putative [Ricinus communis]
          Length = 1159

 Score = 1717 bits (4446), Expect = 0.0
 Identities = 853/1165 (73%), Positives = 975/1165 (83%), Gaps = 7/1165 (0%)
 Frame = -3

Query: 3474 DYKTLQDLIKPHIDSFDHFVDAGLETMLSQIRPIVVFEPYTKTKLQISFGEHELYPPQKE 3295
            DY  LQ+L + HIDSFD+ ++ GLE ML  I+P       ++TK                
Sbjct: 17   DYSALQELTRHHIDSFDYMIERGLEIMLDNIKP-----ESSRTK---------------- 55

Query: 3294 RGVNSFREALYPHECREAKINYAGRFSVEVCFQYNDGPVVREKMNFGHLPIMLKSKVCHL 3115
                   + L P ECR+AKI+Y G+F  +VCF+Y+   V+REK NFG LPIMLKS++CHL
Sbjct: 56   ------HKRLLPFECRQAKISYTGKFEADVCFEYHGKAVIREKYNFGQLPIMLKSRLCHL 109

Query: 3114 RGADPQKLIFHKEEASEMGGYFILNGLERLFRLLIIPKRNYPMSVVRVSFRERQEGYTDK 2935
             G D Q+L+   EE++EMGGYFILNGLER+ RLLI+PKRNYPMS VR SFR+R+EGYTDK
Sbjct: 110  YGVDSQQLVSFNEESAEMGGYFILNGLERVVRLLIMPKRNYPMSTVRGSFRDRREGYTDK 169

Query: 2934 AVLIRCVRD------DQSSISVKLYYLQNGSARLGFWIRGREYLLPVGVVLKALIDTNDH 2773
            AV+IRCVR+      DQSS+SVKLYYL++GSARLGFWI+GREYLLP G+VLKAL +T D 
Sbjct: 170  AVVIRCVREYQSSLTDQSSVSVKLYYLRSGSARLGFWIQGREYLLPAGIVLKALAETTDR 229

Query: 2772 EIYVSLTCCYSEKYQRGKGAVGTQLVGERVKIILDEVQALSLCTQLQCLQHLGAYFKPVM 2593
            EIY  LTCCY EKY++ KGAVG+QLVGER KIILDEV+ LSL TQ +CL+H+G +F+PVM
Sbjct: 230  EIYEKLTCCYDEKYEKAKGAVGSQLVGERAKIILDEVRDLSLFTQSECLRHIGEHFQPVM 289

Query: 2592 DGLETESHLAVGRAVLRDYVFVHLESNHDKFNLLIFMLQKLFALVDQTATPDNPDALQTQ 2413
            DGLE E+   V  AVL+DY+FVHL +  DKFNLLIFMLQKLF+LVDQT+  DNPD+LQ Q
Sbjct: 290  DGLEKETFSNVAHAVLKDYIFVHLNNYDDKFNLLIFMLQKLFSLVDQTSVVDNPDSLQNQ 349

Query: 2412 EVLLPGHLITIFLKEKLQEWLYKARRLLLEEIKNKGESFEFLSLAHIKKIIDKNPSKNIS 2233
            EVLLPGHL+TI+LKEKL+EWL KA+++L EEI  K  +F FLS+  +KK+IDKNPS  IS
Sbjct: 350  EVLLPGHLVTIYLKEKLEEWLRKAKKVLQEEIA-KNNNFNFLSVLDVKKVIDKNPSTTIS 408

Query: 2232 LTVENMLKTGNLVTQSGLDIQQRAGMTVHAERLNFLRFLSHFRAVHRGASFAGLRSTSVR 2053
            L VENMLKTG LVTQ+GLD+QQRAG TV AERLNFLRFLS FRAVHRGASFAGLR+TSVR
Sbjct: 409  LAVENMLKTGRLVTQTGLDLQQRAGYTVQAERLNFLRFLSFFRAVHRGASFAGLRTTSVR 468

Query: 2052 KLLPEAWGFLCPVHTPDGEPCGLLNHMTSTCRVTSHFDSQGNIKDFFKIRLSILSVLTGI 1873
            KLLPE+WGFLCPVHTPDGEPCGLLNHMT +CR+TS+FDSQG +KDFF IR SIL VLT +
Sbjct: 469  KLLPESWGFLCPVHTPDGEPCGLLNHMTRSCRITSYFDSQGAVKDFFDIRKSILGVLTSL 528

Query: 1872 GMTPSLPKLVRAGPPEVLAVLLDGRVXXXXXXXIVEKAVSYIRRLKLSESAGIPNDLEVG 1693
            GMT SLPKLV+AGPP+VL+VLLDGRV        VEK V ++RRLK++ S+ IP+DLEVG
Sbjct: 529  GMTSSLPKLVQAGPPQVLSVLLDGRVVGSIPSSQVEKVVVHLRRLKVAASSVIPDDLEVG 588

Query: 1692 YVPLSMGGAYPGLYLFTSPSRFIRPVRNISIPSEEDLDIELIGPFEQVYMEIKCADGGDG 1513
            YVPLSMGGA+PGLYLFTSPSRFIRPV+NISIP+ E  +IELIGPFEQV+MEI+C DGG+G
Sbjct: 589  YVPLSMGGAFPGLYLFTSPSRFIRPVKNISIPAGEGENIELIGPFEQVFMEIRCPDGGNG 648

Query: 1512 GRKNIFPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQAIQFRAD 1333
            GR + FPATHEEIHPT +LSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFS Q+++FRAD
Sbjct: 649  GRSDAFPATHEEIHPTDMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQSLRFRAD 708

Query: 1332 QKLYHLQTPQTPIVRTTAYTKYNMDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGM 1153
            QKLYHLQTPQTPIVRT++YTKY +DE+PTGTNAIVAVLAYTGYDMEDAMILNKSSVERGM
Sbjct: 709  QKLYHLQTPQTPIVRTSSYTKYCVDEYPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGM 768

Query: 1152 CHGHIYQLETVDLEDERGNSDHALKLFARSNTDKSMHSSIDSDGLPFVGQIVQPNEPYCS 973
            CHG IYQ ET+DL +E   SD A ++F RSN DKS+HS IDSDGLP+VGQ++ PNEPYCS
Sbjct: 769  CHGQIYQTETIDLSEEGSRSDRAQRMFRRSNIDKSLHSVIDSDGLPYVGQMIHPNEPYCS 828

Query: 972  IYNTISSTTKPFALKGSEPVIVDYVAIDGKNHKKPLQKVNVRFRRSRNPVIGDKFSSRHG 793
            IYN I++TT+    KGS+PVIVDYVAID KN KK LQKVN+RFR  RNP+IGDKFSSRHG
Sbjct: 829  IYNEITNTTRTNNRKGSDPVIVDYVAIDTKN-KKHLQKVNIRFRHPRNPIIGDKFSSRHG 887

Query: 792  QKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIGMLFESIAAKGGSLHGKFVDA 613
            QKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTI ML ES+AAKGGSL+GKFVDA
Sbjct: 888  QKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESLAAKGGSLNGKFVDA 947

Query: 612  TPFASSIKTAN-GEXXXXXXSLVDELGPMLTSHGFNYHGLEVLYSGVLGIEMPCEIFIGP 436
            TPF SS+K  N GE      SLVD+LG ML SHGFNYHG+EVLYSGV G E+ CEIFIGP
Sbjct: 948  TPFTSSVKNVNGGEAKSESESLVDDLGNMLRSHGFNYHGVEVLYSGVYGTELTCEIFIGP 1007

Query: 435  VYYQRLRHMVSDKFQVRSTGTLDQVTRQPXXXXXXXXXXRFGEMERDAMLAHGAAYLLHD 256
            VYYQRLRHMVSDKFQVRSTGT+DQ+TRQP          RFGEMERDAMLAHGAAYLLHD
Sbjct: 1008 VYYQRLRHMVSDKFQVRSTGTVDQITRQPIKGRKRGGGIRFGEMERDAMLAHGAAYLLHD 1067

Query: 255  RLHTCSDHHIADVCSLCGSILTTSFIQPQKRAVREIGGLPPGRIPKKVICHACKTSKGME 76
            RLHTCSD+HIADVCSLCGSILTTSFIQ QKR VR+IGGLPP   PKKV CH+C+TSKGME
Sbjct: 1068 RLHTCSDYHIADVCSLCGSILTTSFIQTQKRVVRDIGGLPPVGAPKKVACHSCQTSKGME 1127

Query: 75   TVAMPYVFRYLAAELAAMNIKMTLK 1
            TVAMPYVFRYLAAELAAMNIKM ++
Sbjct: 1128 TVAMPYVFRYLAAELAAMNIKMNVQ 1152


>ref|XP_006594369.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like isoform X2
            [Glycine max]
          Length = 1151

 Score = 1665 bits (4312), Expect = 0.0
 Identities = 821/1159 (70%), Positives = 959/1159 (82%)
 Frame = -3

Query: 3477 PDYKTLQDLIKPHIDSFDHFVDAGLETMLSQIRPIVVFEPYTKTKLQISFGEHELYPPQK 3298
            PD++ L++L K HI+SFD+ VDAGL+TML  I+P+ VF+ +T TKL+I      LYPPQK
Sbjct: 9    PDFEALRELFKHHIESFDYMVDAGLDTMLGHIKPVEVFDDFTSTKLRIWLDNPVLYPPQK 68

Query: 3297 ERGVNSFREALYPHECREAKINYAGRFSVEVCFQYNDGPVVREKMNFGHLPIMLKSKVCH 3118
            ER   + REAL P ECR+AKI+Y+G+ +++VCFQYNDGP++RE +NFG  PIML+SK+C+
Sbjct: 69   ERISRTMREALLPFECRQAKISYSGKITIDVCFQYNDGPIIRENVNFGQFPIMLQSKLCN 128

Query: 3117 LRGADPQKLIFHKEEASEMGGYFILNGLERLFRLLIIPKRNYPMSVVRVSFRERQEGYTD 2938
            LRGADPQKL+ +KEEASEMGGYFILNGLER+ RLLI+PKRNYPMS+VR SF +R+EGYTD
Sbjct: 129  LRGADPQKLVSYKEEASEMGGYFILNGLERVVRLLILPKRNYPMSMVRNSFSDRREGYTD 188

Query: 2937 KAVLIRCVRDDQSSISVKLYYLQNGSARLGFWIRGREYLLPVGVVLKALIDTNDHEIYVS 2758
            KAV+IRCVR DQSS+SV+LYYL+NGSARLGFW+RGREYLLPVG++LKALIDT D EIYV+
Sbjct: 189  KAVVIRCVRADQSSLSVRLYYLRNGSARLGFWLRGREYLLPVGIILKALIDTTDREIYVN 248

Query: 2757 LTCCYSEKYQRGKGAVGTQLVGERVKIILDEVQALSLCTQLQCLQHLGAYFKPVMDGLET 2578
            LT CY+EKY++GKGAVGTQLVGER KIILDE++ LSL T+LQCL+++G +F+PVM+ L+ 
Sbjct: 249  LTSCYNEKYEKGKGAVGTQLVGERAKIILDELRDLSLFTRLQCLEYIGEHFQPVMNELKN 308

Query: 2577 ESHLAVGRAVLRDYVFVHLESNHDKFNLLIFMLQKLFALVDQTATPDNPDALQTQEVLLP 2398
            +S+  V  AVL+D + VHL++N DKFNLLIFMLQKLF+L+DQT+ PDNPD+LQ  EVLLP
Sbjct: 309  DSYPIVADAVLKDCILVHLDNNFDKFNLLIFMLQKLFSLIDQTSVPDNPDSLQNHEVLLP 368

Query: 2397 GHLITIFLKEKLQEWLYKARRLLLEEIKNKGESFEFLSLAHIKKIIDKNPSKNISLTVEN 2218
            GHLIT++LKEKL++WL K RRLLL+EI  K + F+F  +  +KK++DKN  K +S  VEN
Sbjct: 369  GHLITLYLKEKLEDWLQKGRRLLLDEIDKKSKKFDFSDIVQVKKVMDKNSPKQVSTAVEN 428

Query: 2217 MLKTGNLVTQSGLDIQQRAGMTVHAERLNFLRFLSHFRAVHRGASFAGLRSTSVRKLLPE 2038
            MLKTG LVTQ+GLD+QQRAG TV AERLNFLRFLSHFRAVHRGASFAGLR+T+VRKLLPE
Sbjct: 429  MLKTGRLVTQTGLDLQQRAGYTVQAERLNFLRFLSHFRAVHRGASFAGLRTTTVRKLLPE 488

Query: 2037 AWGFLCPVHTPDGEPCGLLNHMTSTCRVTSHFDSQGNIKDFFKIRLSILSVLTGIGMTPS 1858
            +WGFLCPVHTPDGEPCGLLNHMT T R+TS FDSQGNIKD+FKI++SIL+VL  +GMTPS
Sbjct: 489  SWGFLCPVHTPDGEPCGLLNHMTCTSRITSFFDSQGNIKDYFKIKMSILNVLLEVGMTPS 548

Query: 1857 LPKLVRAGPPEVLAVLLDGRVXXXXXXXIVEKAVSYIRRLKLSESAGIPNDLEVGYVPLS 1678
            LPK+   GPPE L VLLDG V        VEK V++IR LK+S  A IP+D+EVGYVPLS
Sbjct: 549  LPKIFLPGPPEALTVLLDGCVVGCIASSEVEKVVAHIRELKVSSVAVIPDDMEVGYVPLS 608

Query: 1677 MGGAYPGLYLFTSPSRFIRPVRNISIPSEEDLDIELIGPFEQVYMEIKCADGGDGGRKNI 1498
            MGGAYPGLYL TSPSRF+RPVRNISI S+   +IELIGPFEQV+MEI+C DGGDGGRK+ 
Sbjct: 609  MGGAYPGLYLCTSPSRFVRPVRNISIASDGSENIELIGPFEQVFMEIRCPDGGDGGRKSS 668

Query: 1497 FPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQAIQFRADQKLYH 1318
            FPATHEEIHPT +LSVVANLTPWSDHNQSPRNMYQ   A   + F++ +   R       
Sbjct: 669  FPATHEEIHPTVMLSVVANLTPWSDHNQSPRNMYQYGKANNGIFFTNYSTSCR------- 721

Query: 1317 LQTPQTPIVRTTAYTKYNMDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMCHGHI 1138
                  P V ++           +GTNAIVAVLAYTGYDMEDAMILNKSSVERGM HG I
Sbjct: 722  ------PKVISS-----------SGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQI 764

Query: 1137 YQLETVDLEDERGNSDHALKLFARSNTDKSMHSSIDSDGLPFVGQIVQPNEPYCSIYNTI 958
            YQ ET+DL ++ G SD + ++F +SN +KS   SIDSDGLP VGQ+++P+EPYCSIYN +
Sbjct: 765  YQTETIDLTEQGGRSDRSSRMFRKSNIEKSACPSIDSDGLPHVGQMIRPDEPYCSIYNEV 824

Query: 957  SSTTKPFALKGSEPVIVDYVAIDGKNHKKPLQKVNVRFRRSRNPVIGDKFSSRHGQKGVC 778
            +S+      KGSE V VDYVA D KN KK LQKVN+RFR  RNPVIGDKFSSRHGQKGVC
Sbjct: 825  TSSIHTLKRKGSEAVYVDYVAADVKN-KKHLQKVNIRFRHPRNPVIGDKFSSRHGQKGVC 883

Query: 777  SQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIGMLFESIAAKGGSLHGKFVDATPFAS 598
            SQLWPD+DMPFSG TGMRPDLIINPHAFPSRMTI ML ES+AAKGGSL G+FVDATPF S
Sbjct: 884  SQLWPDVDMPFSGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLRGEFVDATPFRS 943

Query: 597  SIKTANGEXXXXXXSLVDELGPMLTSHGFNYHGLEVLYSGVLGIEMPCEIFIGPVYYQRL 418
            S+   +GE      SLVD+LG +L   GFNYHGLEVLYSGV G E+ CEIFIGPVYYQRL
Sbjct: 944  SVTKDSGESDSKSGSLVDDLGLLLREKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRL 1003

Query: 417  RHMVSDKFQVRSTGTLDQVTRQPXXXXXXXXXXRFGEMERDAMLAHGAAYLLHDRLHTCS 238
            RHMVSDKFQVRSTGT+DQVTRQP          RFGEMERD++LAHGAAYLLHDRLHTCS
Sbjct: 1004 RHMVSDKFQVRSTGTIDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTCS 1063

Query: 237  DHHIADVCSLCGSILTTSFIQPQKRAVREIGGLPPGRIPKKVICHACKTSKGMETVAMPY 58
            D+HIADVCSLCGS+L T+FIQPQKR VREIGGLPPGR PKKV CHAC+TSKGMETVAMPY
Sbjct: 1064 DYHIADVCSLCGSMLATTFIQPQKRPVREIGGLPPGRAPKKVTCHACQTSKGMETVAMPY 1123

Query: 57   VFRYLAAELAAMNIKMTLK 1
            VFRYLAAELAAMNIKMTLK
Sbjct: 1124 VFRYLAAELAAMNIKMTLK 1142


>ref|XP_006428126.1| hypothetical protein CICLE_v10024768mg [Citrus clementina]
            gi|557530116|gb|ESR41366.1| hypothetical protein
            CICLE_v10024768mg [Citrus clementina]
          Length = 1082

 Score = 1650 bits (4274), Expect = 0.0
 Identities = 794/1073 (73%), Positives = 929/1073 (86%), Gaps = 3/1073 (0%)
 Frame = -3

Query: 3210 EVCFQYNDG--PVVREKMNFGHLPIMLKSKVCHLRGADPQKLIFHKEEASEMGGYFILNG 3037
            +V FQY D   PVVRE+ NFG  P+MLK++ CHL+GAD QKL+  KEEA+EMGGYFILNG
Sbjct: 3    DVEFQYLDAGSPVVRERFNFGQFPVMLKTRRCHLQGADSQKLVSLKEEAAEMGGYFILNG 62

Query: 3036 LERLFRLLIIPKRNYPMSVVRVSFRERQEGYTDKAVLIRCVRDDQSSISVKLYYLQNGSA 2857
            LER+FR +I+PK+NYPMS+VR SFR+R+EGYTDKAV+IRCVR DQSS+++KLYYL NGS 
Sbjct: 63   LERVFRSVILPKQNYPMSMVRSSFRDRREGYTDKAVVIRCVRKDQSSVTLKLYYLLNGSV 122

Query: 2856 RLGFWIRGREYLLPVGVVLKALIDTNDHEIYVSLTCCYSEKYQRGKGAVGTQLVGERVKI 2677
            RLGFW++G+EYLLPVG+VLKAL+DTND EI+  LTCCY EKY++ KGAVG+ LV ERVKI
Sbjct: 123  RLGFWLQGKEYLLPVGIVLKALVDTNDLEIFNHLTCCYDEKYKKEKGAVGSPLVSERVKI 182

Query: 2676 ILDEVQALSLCTQLQCLQHLGAYFKPVMDGLETESHLAVGRAVLRDYVFVHLESNHDKFN 2497
            IL EVQ LSL T+LQCLQH+G +F+PV+DGL++ES+ AV   V+RDY+FVHL  N+DKFN
Sbjct: 183  ILAEVQDLSLTTRLQCLQHIGEHFQPVIDGLQSESYYAVAETVIRDYIFVHLNDNNDKFN 242

Query: 2496 LLIFMLQKLFALVDQTATPDNPDALQTQEVLLPGHLITIFLKEKLQEWLYKARRLLLEEI 2317
            LLIFMLQKLF+LVD T+  DNPD+LQ QE+LLPGHLITI+LKEKL++WL K ++L+ +EI
Sbjct: 243  LLIFMLQKLFSLVDHTSVSDNPDSLQNQEILLPGHLITIYLKEKLEDWLRKGKKLIQDEI 302

Query: 2316 KNKGESFEFLSLAHIKKIIDKNPSKNISLTVENMLKTGNLVTQSGLDIQQRAGMTVHAER 2137
            +N G+ F+F +LA+IKK+++KNPSK I  ++E MLKTG L TQ+GLD+QQRAG TV AER
Sbjct: 303  ENNGKKFDFFNLANIKKVMEKNPSKQIGTSIETMLKTGRLATQTGLDLQQRAGYTVQAER 362

Query: 2136 LNFLRFLSHFRAVHRGASFAGLRSTSVRKLLPEAWGFLCPVHTPDGEPCGLLNHMTSTCR 1957
            LNFLRF+S FRAVHRGASFAGLR+TSVRKLLPE+WGFLCPVHTPDGEPCGLLNHMTSTCR
Sbjct: 363  LNFLRFISFFRAVHRGASFAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTSTCR 422

Query: 1956 VTSHFDSQGNIKDFFKIRLSILSVLTGIGMTPSLPKLVRAGPPEVLAVLLDGRVXXXXXX 1777
            V S++DS+GNI+DF K+R SIL VL G+GM PSLPKLV++GPP VL+VLLDGRV      
Sbjct: 423  VASYYDSRGNIRDFSKMRTSILRVLIGVGMIPSLPKLVKSGPPAVLSVLLDGRVVGVIPS 482

Query: 1776 XIVEKAVSYIRRLKLSESAGIPNDLEVGYVPLSMGGAYPGLYLFTSPSRFIRPVRNISIP 1597
              +EK V+++RRLK+S ++ IP+DLEVGYVPLS+GGAYPGLYLFTSP +F+RPVRNIS+P
Sbjct: 483  SEIEKVVAHLRRLKVSAASVIPDDLEVGYVPLSLGGAYPGLYLFTSPPKFVRPVRNISLP 542

Query: 1596 SEEDLDIELIGPFEQVYMEIKCADGGDGGRKNIFPATHEEIHPTGILSVVANLTPWSDHN 1417
            SEE  +IELIGPFEQV+MEI+C DGGDGGR+N FPATHEEIHPTG+LSVVANLTP+SDHN
Sbjct: 543  SEESQNIELIGPFEQVFMEIRCPDGGDGGRRNAFPATHEEIHPTGMLSVVANLTPYSDHN 602

Query: 1416 QSPRNMYQCQMAKQTMAFSSQAIQFRADQKLYHLQTPQTPIVRTTAYTKYNMDEFPTGTN 1237
            QSPRNMYQCQMAKQTM FS QA++FRADQKLYHLQTPQTPIVRT  YTKY++DE+PTGTN
Sbjct: 603  QSPRNMYQCQMAKQTMGFSVQALKFRADQKLYHLQTPQTPIVRTNTYTKYSIDEYPTGTN 662

Query: 1236 AIVAVLAYTGYDMEDAMILNKSSVERGMCHGHIYQLETVDLEDERGNSDHALKLFARSNT 1057
            AIVAVLAYTGYDMEDAMILNKSSV+RGMCHG IYQ ET+DL D+    D   KLF R+  
Sbjct: 663  AIVAVLAYTGYDMEDAMILNKSSVDRGMCHGQIYQTETIDLSDDGNKVDRGQKLFRRNKD 722

Query: 1056 DKSMHSSIDSDGLPFVGQIVQPNEPYCSIYNTISSTTKPFALKGSEPVIVDYVAIDGKNH 877
             KS+HS IDSDGLP+VGQ++ P EPYCSIY+  +++ +  + KGSE V VDYVA+D KN 
Sbjct: 723  AKSLHSVIDSDGLPYVGQMIHPGEPYCSIYDKTTNSWRTNSRKGSESVFVDYVAVDMKNS 782

Query: 876  KKPLQKVNVRFRRSRNPVIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHA 697
            K   QK N+RFR +RNP+IGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHA
Sbjct: 783  KNLPQKANIRFRHTRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHA 842

Query: 696  FPSRMTIGMLFESIAAKGGSLHGKFVDATPFASSIKTANGE-XXXXXXSLVDELGPMLTS 520
            FPSRMTI ML ES+AAKGGSLHGKF+DATPFA+S+K  NG+       SLVDELG ML +
Sbjct: 843  FPSRMTIAMLLESVAAKGGSLHGKFMDATPFANSVKKTNGDTGTDESKSLVDELGEMLRT 902

Query: 519  HGFNYHGLEVLYSGVLGIEMPCEIFIGPVYYQRLRHMVSDKFQVRSTGTLDQVTRQPXXX 340
             GFNYHG+EVLYSGV G E+ CEIFIGPVYYQRLRHMVSDKFQVRSTGT+DQ+TRQP   
Sbjct: 903  CGFNYHGVEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTMDQITRQPIKG 962

Query: 339  XXXXXXXRFGEMERDAMLAHGAAYLLHDRLHTCSDHHIADVCSLCGSILTTSFIQPQKRA 160
                   RFGEMERD++LAHGAAYLLHDRLHTCSD+H+ADVCSLCGS+LT +FI PQKRA
Sbjct: 963  RKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTCSDYHVADVCSLCGSVLTATFIHPQKRA 1022

Query: 159  VREIGGLPPGRIPKKVICHACKTSKGMETVAMPYVFRYLAAELAAMNIKMTLK 1
            +REIGGLPP R PKKV CHAC+TSKGMETVAMPYVFRYLAAELAAMNIK+TL+
Sbjct: 1023 IREIGGLPPARAPKKVTCHACQTSKGMETVAMPYVFRYLAAELAAMNIKITLQ 1075


>ref|XP_004307166.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Fragaria
            vesca subsp. vesca]
          Length = 1169

 Score = 1639 bits (4244), Expect = 0.0
 Identities = 814/1160 (70%), Positives = 953/1160 (82%), Gaps = 2/1160 (0%)
 Frame = -3

Query: 3474 DYKTLQDLIKPHIDSFDHFVDAGLETMLSQIRPIVVFEPYTKTKLQISFGEHELYP-PQK 3298
            D   L++L + HIDSFD+ + AGL  ML  I+P+ V  P T   L+I F +  +   P K
Sbjct: 12   DLAHLRELFRHHIDSFDYLITAGLGVMLRDIKPVQVDNPLTGETLRIWFADDPILGRPLK 71

Query: 3297 ERGVNSFREALYPHECREAKINYAGRFSVEVCFQYNDGPVVREKMNFGHLPIMLKSKVCH 3118
            +R      E LYP ECR+ +I+Y G+   ++ FQ  D   VRE+ NFG  PIML SK C+
Sbjct: 72   DRS----SEPLYPFECRQTRISYTGKLLADIYFQRGDKAPVREQFNFGQFPIMLMSKCCN 127

Query: 3117 LRGADPQKLIFHKEEASEMGGYFILNGLERLFRLLIIPKRNYPMSVVRVSFRERQEGYTD 2938
            LRG DPQ+L+  KEEASEMGGYFILNGLER+ R +I+PKRNYPMS VR SFR+R+EGYTD
Sbjct: 128  LRGHDPQQLVSCKEEASEMGGYFILNGLERVIRPVILPKRNYPMSTVRNSFRDRKEGYTD 187

Query: 2937 KAVLIRCVRDDQSSISVKLYYLQNGSARLGFWIRGREYLLPVGVVLKALIDTNDHEIYVS 2758
            KAV+IRC RDDQSS++VKLYYLQNGSARLG WI+G+E+LLPVG++LKAL+DT D+E+Y S
Sbjct: 188  KAVVIRCARDDQSSVTVKLYYLQNGSARLGVWIQGKEFLLPVGLILKALVDTPDNELYAS 247

Query: 2757 LTCCYSEKYQRGKGAVGTQLVGERVKIILDEVQALSLCTQLQCLQHLGAYFKPVMDGLET 2578
            LTCCY  K+++GKGAVGTQLVGER +II++EV  L L T+ QCL+++G +F+P+M GLE 
Sbjct: 248  LTCCYPGKFEKGKGAVGTQLVGERAQIIINEVVELGLFTRGQCLENIGEHFQPLMSGLEN 307

Query: 2577 ESHLAVGRAVLRDYVFVHLESNHDKFNLLIFMLQKLFALVDQTATPDNPDALQTQEVLLP 2398
            ES+  VG AVL+DY+FVHL+ N DKFNLLIFMLQKLF+L+DQT+  DNPD+LQ QEVLLP
Sbjct: 308  ESYSVVGDAVLKDYIFVHLDKNEDKFNLLIFMLQKLFSLMDQTSVLDNPDSLQNQEVLLP 367

Query: 2397 GHLITIFLKEKLQEWLYKARRLLLEEIKNKGESFEFLSLAHIKKIIDKNPSKNISLTVEN 2218
            GHLITI+LKEKL++WL + ++LL +EIK +  +  F S+  +KK++DKNP++ ISL VEN
Sbjct: 368  GHLITIYLKEKLEDWLQRTKKLLQDEIKKENNNINFGSVDSLKKVLDKNPTRQISLAVEN 427

Query: 2217 MLKTGNLVTQSGLDIQQRAGMTVHAERLNFLRFLSHFRAVHRGASFAGLRSTSVRKLLPE 2038
            MLKTG + TQ+GLD+QQRAG +V AERLNFLRFLSHFRAVHRGASFAGLR+TSVRKLLPE
Sbjct: 428  MLKTGRINTQTGLDLQQRAGFSVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKLLPE 487

Query: 2037 AWGFLCPVHTPDGEPCGLLNHMTSTCRVTSHFDSQGNIKDFFKIRLSILSVLTGIGMTPS 1858
            +WGFLCPVHTPDGEPCGLLNHMT TCR+TS+FD+QGNI+DF KIR+SIL+VL  +GM PS
Sbjct: 488  SWGFLCPVHTPDGEPCGLLNHMTRTCRITSYFDAQGNIRDFTKIRMSILNVLIEVGMIPS 547

Query: 1857 LPKLVRAGPPEVLAVLLDGRVXXXXXXXIVEKAVSYIRRLKLSESAGIPNDLEVGYVPLS 1678
            LP LV  G P  L+VLLDGRV        VEK V+++R+LK+S ++ IP+DLEVGYVPLS
Sbjct: 548  LPMLVHVGLPANLSVLLDGRVVGYISSTQVEKVVAHLRKLKVSAASVIPDDLEVGYVPLS 607

Query: 1677 MGGAYPGLYLFTSPSRFIRPVRNISIPSEEDLDIELIGPFEQVYMEIKCADGGDGGRKNI 1498
            MGGAYPGLYLFTSPSRF+RPV+NISI + E  +IELIGPFEQV+MEIKC DG DGGRK+ 
Sbjct: 608  MGGAYPGLYLFTSPSRFVRPVKNISISAVEGQNIELIGPFEQVFMEIKCPDGRDGGRKDA 667

Query: 1497 FPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQAIQFRADQKLYH 1318
            FPATHEEIHPTG+LSVVANLTPWS+HNQSPRNMYQCQMAKQTM FS QA++ RADQKLYH
Sbjct: 668  FPATHEEIHPTGMLSVVANLTPWSEHNQSPRNMYQCQMAKQTMGFSLQALRNRADQKLYH 727

Query: 1317 LQTPQTPIVRTTAYTKYNMDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMCHGHI 1138
            L+TPQ+PIVRT  YT Y +DE+PTGTNAIVAVL+YTGYDMEDAMIL+KSSV+RGM HG +
Sbjct: 728  LKTPQSPIVRTKTYTNYCVDEYPTGTNAIVAVLSYTGYDMEDAMILSKSSVDRGMFHGLV 787

Query: 1137 YQLETVDLEDERGNSDHALKLFARSNTDKSMHSSIDSDGLPFVGQIVQPNEPYCSIYNTI 958
            YQ E+VDL D++G S  + + F RS  DKS HS IDSDGLP+VGQ + P+EPY SIY+ +
Sbjct: 788  YQTESVDLSDQKGRSG-SQRSFRRSAADKSHHSLIDSDGLPYVGQTINPDEPYYSIYDEV 846

Query: 957  SSTTKPFALKGSEPVIVDYVAIDGKNHKKPLQKVNVRFRRSRNPVIGDKFSSRHGQKGVC 778
                +    KGSEP IVDYVAIDGK H   LQKVN+RFR  RNP+IGDKFSSRHGQKGVC
Sbjct: 847  KGAIRTTKRKGSEPAIVDYVAIDGKKH---LQKVNIRFRHPRNPIIGDKFSSRHGQKGVC 903

Query: 777  SQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIGMLFESIAAKGGSLHGKFVDATPFAS 598
            SQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTI ML ES+AAKGGSLHGKFVDATPFA+
Sbjct: 904  SQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKFVDATPFAN 963

Query: 597  SIKTANGE-XXXXXXSLVDELGPMLTSHGFNYHGLEVLYSGVLGIEMPCEIFIGPVYYQR 421
            S K  N E       +LVDELG ML   GFNY+G EVLYSGV G E+ CEIFIGPVYYQR
Sbjct: 964  SEKKVNEETNGEKSKTLVDELGEMLKVKGFNYYGAEVLYSGVYGTELTCEIFIGPVYYQR 1023

Query: 420  LRHMVSDKFQVRSTGTLDQVTRQPXXXXXXXXXXRFGEMERDAMLAHGAAYLLHDRLHTC 241
            LRHMVSDKFQVRSTG +DQVTRQP          RFGEMERD++LAHGAAYLLHDRLHTC
Sbjct: 1024 LRHMVSDKFQVRSTGMVDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTC 1083

Query: 240  SDHHIADVCSLCGSILTTSFIQPQKRAVREIGGLPPGRIPKKVICHACKTSKGMETVAMP 61
            SD+HIADVCSLCGSILTTS +QPQ   VREI G+PP R PKKV CHACKTSKGMETVAMP
Sbjct: 1084 SDYHIADVCSLCGSILTTSSVQPQV-PVREIPGMPPMRAPKKVTCHACKTSKGMETVAMP 1142

Query: 60   YVFRYLAAELAAMNIKMTLK 1
            YVFRYLAAELAAMNIK+ L+
Sbjct: 1143 YVFRYLAAELAAMNIKLNLQ 1162


>ref|XP_004300118.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Fragaria
            vesca subsp. vesca]
          Length = 1171

 Score = 1630 bits (4221), Expect = 0.0
 Identities = 808/1160 (69%), Positives = 953/1160 (82%), Gaps = 2/1160 (0%)
 Frame = -3

Query: 3474 DYKTLQDLIKPHIDSFDHFVDAGLETMLSQIRPIVVFEPYTKTKLQISFGEHELYP-PQK 3298
            D   L++L + HI+SFD+ V AGL  ML  I+P+ V  P T   L+I F +  +   P K
Sbjct: 14   DLAHLRELFRHHIESFDYLVSAGLGVMLRDIKPVQVDNPLTGETLRIWFADDPILGRPLK 73

Query: 3297 ERGVNSFREALYPHECREAKINYAGRFSVEVCFQYNDGPVVREKMNFGHLPIMLKSKVCH 3118
            +R      E LYP ECR+ +I+Y G+   ++ FQ  D   VRE+ NFG  PIML SK C+
Sbjct: 74   DRST----EPLYPFECRQTRISYTGKLLADIYFQRGDKAPVREQFNFGQFPIMLMSKCCN 129

Query: 3117 LRGADPQKLIFHKEEASEMGGYFILNGLERLFRLLIIPKRNYPMSVVRVSFRERQEGYTD 2938
            LRG DPQ+L++ KEE+SEMGGYFILNGLER+ R +I+PKRNYPMS VR SFR+R+EGYTD
Sbjct: 130  LRGHDPQQLVYCKEESSEMGGYFILNGLERVIRPVILPKRNYPMSTVRNSFRDRKEGYTD 189

Query: 2937 KAVLIRCVRDDQSSISVKLYYLQNGSARLGFWIRGREYLLPVGVVLKALIDTNDHEIYVS 2758
            KAV+IRC RDDQSS++VKLYYLQNGSARLG WI+G+E+LLPVG++LKALIDT D+E+Y S
Sbjct: 190  KAVVIRCARDDQSSVTVKLYYLQNGSARLGVWIQGKEFLLPVGLILKALIDTPDNELYAS 249

Query: 2757 LTCCYSEKYQRGKGAVGTQLVGERVKIILDEVQALSLCTQLQCLQHLGAYFKPVMDGLET 2578
            LTCCY EK+++GKGAVGTQLVGER +II++EV  L L T+ QCL+H+G +F+P+M GLE 
Sbjct: 250  LTCCYPEKFEKGKGAVGTQLVGERAQIIINEVVDLGLFTRGQCLEHIGEHFQPLMGGLEN 309

Query: 2577 ESHLAVGRAVLRDYVFVHLESNHDKFNLLIFMLQKLFALVDQTATPDNPDALQTQEVLLP 2398
            E +  VG AVL+DY+FVHL+ N DKFNLLIFMLQKLF+L+DQT+  DNPD+LQ QEVLLP
Sbjct: 310  EPYSVVGDAVLKDYIFVHLDKNEDKFNLLIFMLQKLFSLMDQTSVLDNPDSLQNQEVLLP 369

Query: 2397 GHLITIFLKEKLQEWLYKARRLLLEEIKNKGESFEFLSLAHIKKIIDKNPSKNISLTVEN 2218
            GHLITI+LKEKL++WL + ++LL +EIK +  +  F S+  +KK++DKNP++ ISL VEN
Sbjct: 370  GHLITIYLKEKLEDWLQRTKKLLQDEIKKESNNINFGSVDSLKKVLDKNPTRQISLAVEN 429

Query: 2217 MLKTGNLVTQSGLDIQQRAGMTVHAERLNFLRFLSHFRAVHRGASFAGLRSTSVRKLLPE 2038
            MLKTG + TQ+GLD+QQRAG +V AERLNFLRFLSHFRAVHRGASFAGLR+TSVRKLLPE
Sbjct: 430  MLKTGRINTQTGLDLQQRAGFSVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKLLPE 489

Query: 2037 AWGFLCPVHTPDGEPCGLLNHMTSTCRVTSHFDSQGNIKDFFKIRLSILSVLTGIGMTPS 1858
            +WGFLCPVHTPDGEPCGLLNHMT TCR+TS+FD+QGNI+DF K+++SIL+VL  +GM PS
Sbjct: 490  SWGFLCPVHTPDGEPCGLLNHMTRTCRITSYFDAQGNIRDFTKMQMSILNVLIEVGMIPS 549

Query: 1857 LPKLVRAGPPEVLAVLLDGRVXXXXXXXIVEKAVSYIRRLKLSESAGIPNDLEVGYVPLS 1678
            LP LV AG P  L+VLLDGRV        VEK V+++R+LK+S ++ IP+DLEVGYVPLS
Sbjct: 550  LPMLVHAGLPANLSVLLDGRVVGYISSTQVEKVVAHLRKLKVSAASVIPDDLEVGYVPLS 609

Query: 1677 MGGAYPGLYLFTSPSRFIRPVRNISIPSEEDLDIELIGPFEQVYMEIKCADGGDGGRKNI 1498
            MGGAYPGLYLFTSPSRF+RPV+NISI + E  +IELIGPFEQV+MEI+C DG DGGRK+ 
Sbjct: 610  MGGAYPGLYLFTSPSRFVRPVKNISISAVEGQNIELIGPFEQVFMEIRCPDGRDGGRKDA 669

Query: 1497 FPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQAIQFRADQKLYH 1318
            FPATHEEIHPTG+LSVVANLTPWS+HNQSPRNMYQCQMAKQTM FS QA++ RADQKLYH
Sbjct: 670  FPATHEEIHPTGMLSVVANLTPWSEHNQSPRNMYQCQMAKQTMGFSLQALRNRADQKLYH 729

Query: 1317 LQTPQTPIVRTTAYTKYNMDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMCHGHI 1138
            L+TPQ+PIVRT  YT Y +DE+PTGTNAIVAVL+YTGYDMEDAMIL+KSSV+RGM HG +
Sbjct: 730  LKTPQSPIVRTKTYTNYCVDEYPTGTNAIVAVLSYTGYDMEDAMILSKSSVDRGMFHGLV 789

Query: 1137 YQLETVDLEDERGNSDHALKLFARSNTDKSMHSSIDSDGLPFVGQIVQPNEPYCSIYNTI 958
            YQ E++DL D++G S  + + F RS  DKS HS IDSDGLP+VGQ ++P+EPY S Y+ +
Sbjct: 790  YQTESIDLSDQKGRSG-SQRSFRRSAADKSYHSLIDSDGLPYVGQTIKPDEPYYSTYDEV 848

Query: 957  SSTTKPFALKGSEPVIVDYVAIDGKNHKKPLQKVNVRFRRSRNPVIGDKFSSRHGQKGVC 778
                +    KGSEP IVDYVAIDG   KK LQKVN+RFR  RNP+IGDKFSSRHGQKGVC
Sbjct: 849  KGAIRTTKRKGSEPAIVDYVAIDG---KKQLQKVNIRFRHPRNPIIGDKFSSRHGQKGVC 905

Query: 777  SQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIGMLFESIAAKGGSLHGKFVDATPFAS 598
            SQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTI ML ES+AAKGGSLHGK+VDATPFA+
Sbjct: 906  SQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKYVDATPFAN 965

Query: 597  SIKTANGE-XXXXXXSLVDELGPMLTSHGFNYHGLEVLYSGVLGIEMPCEIFIGPVYYQR 421
            S K    E       +LVDELG ML   GFNY+G EVLYSGV G E+ CEIFIGPVYYQR
Sbjct: 966  SEKKVKEETNGEKSKTLVDELGEMLKVKGFNYNGAEVLYSGVYGTELTCEIFIGPVYYQR 1025

Query: 420  LRHMVSDKFQVRSTGTLDQVTRQPXXXXXXXXXXRFGEMERDAMLAHGAAYLLHDRLHTC 241
            LRHMVSDKFQVRSTG +DQVTRQP          RFGEMERD++LAHGAAYLLHDRLHTC
Sbjct: 1026 LRHMVSDKFQVRSTGMVDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTC 1085

Query: 240  SDHHIADVCSLCGSILTTSFIQPQKRAVREIGGLPPGRIPKKVICHACKTSKGMETVAMP 61
            SD+HIADVCSLCGSILTTS +QP  R V EI G+PP R PKKV CHACKTSKGMETVAMP
Sbjct: 1086 SDYHIADVCSLCGSILTTSSVQPPVR-VCEIPGMPPMRAPKKVTCHACKTSKGMETVAMP 1144

Query: 60   YVFRYLAAELAAMNIKMTLK 1
            YVFRYLAAELAAMNIK+ L+
Sbjct: 1145 YVFRYLAAELAAMNIKLNLQ 1164


>ref|XP_006415532.1| hypothetical protein EUTSA_v10006599mg [Eutrema salsugineum]
            gi|557093303|gb|ESQ33885.1| hypothetical protein
            EUTSA_v10006599mg [Eutrema salsugineum]
          Length = 1183

 Score = 1627 bits (4212), Expect = 0.0
 Identities = 791/1161 (68%), Positives = 954/1161 (82%), Gaps = 3/1161 (0%)
 Frame = -3

Query: 3474 DYKTLQDLIKPHIDSFDHFVDAGLETMLSQIRPIVVFEPYTKTKLQISFGEHELYPPQKE 3295
            D+  L +L+  HI+SFD+  + GL  M S+I+P+ V+EP T+ KL I   +  +Y PQKE
Sbjct: 16   DFTELHNLVTHHIESFDYMTEKGLAVMFSRIKPVTVYEPSTERKLSIWLEDPRVYSPQKE 75

Query: 3294 R-GVNSFREALYPHECREAKINYAGRFSVEVCFQYN-DGPVVREKMNFGHLPIMLKSKVC 3121
                 S +EAL+P ECR+AKI+Y G    E+CF+Y+ D  VVR++  FG  PIML SK+C
Sbjct: 76   SLRSTSRKEALFPFECRQAKISYTGSLMAEICFRYDEDEYVVRDRYEFGEFPIMLMSKLC 135

Query: 3120 HLRGADPQKLIFHKEEASEMGGYFILNGLERLFRLLIIPKRNYPMSVVRVSFRERQEGYT 2941
            HLRGAD ++L+ +KE  SEMGGYFILNG+ER+FR +I PKRN+P  +VR SF  R+EGY+
Sbjct: 136  HLRGADCRQLLKYKESTSEMGGYFILNGIERVFRCVIAPKRNHPTGMVRNSFCGRREGYS 195

Query: 2940 DKAVLIRCVRDDQSSISVKLYYLQNGSARLGFWIRGREYLLPVGVVLKALIDTNDHEIYV 2761
            DKAV IRCVRDDQSS++VKLYYL+NGSAR+GFWI  REYLLPVGVVLKAL +TND EIY 
Sbjct: 196  DKAVAIRCVRDDQSSVTVKLYYLRNGSARVGFWIGAREYLLPVGVVLKALTETNDEEIYE 255

Query: 2760 SLTCCYSEKYQRGKGAVGTQLVGERVKIILDEVQALSLCTQLQCLQHLGAYFKPVMDGLE 2581
            +LTCCY+E+Y RG GA+GTQL+ ER KIILDEV+ L L T+ QC ++LG  F+P +DGLE
Sbjct: 256  NLTCCYNERYGRGDGAIGTQLIRERSKIILDEVRDLGLFTRDQCRKYLGERFQPALDGLE 315

Query: 2580 TESHLAVGRAVLRDYVFVHLESNHDKFNLLIFMLQKLFALVDQTATPDNPDALQTQEVLL 2401
             ES+  V  AVL++Y+FVHL+++ DKFNLLIF++QKLF+LVDQT+ PDNPD+LQ QE+L+
Sbjct: 316  KESYPTVAEAVLKNYIFVHLDNDDDKFNLLIFLIQKLFSLVDQTSLPDNPDSLQNQEILV 375

Query: 2400 PGHLITIFLKEKLQEWLYKARRLLLEEIKNKGESFEFLSLAHIKKIIDKNPSKNISLTVE 2221
            PGHLITI+LKEKL+EWL K + L+ +E  N+ + F F ++A +KKII+KNP ++I +++E
Sbjct: 376  PGHLITIYLKEKLEEWLRKCKSLIEDEF-NRSKKFSFETIADVKKIINKNPPRSIGMSIE 434

Query: 2220 NMLKTGNLVTQSGLDIQQRAGMTVHAERLNFLRFLSHFRAVHRGASFAGLRSTSVRKLLP 2041
             +LK+G L TQSGLD+QQRAG TV AERLNFLRFLS FRAVHRGASFAGLR+T+VRKLLP
Sbjct: 435  TLLKSGRLNTQSGLDLQQRAGYTVQAERLNFLRFLSFFRAVHRGASFAGLRTTTVRKLLP 494

Query: 2040 EAWGFLCPVHTPDGEPCGLLNHMTSTCRVTSHFDSQGNIKDFFKIRLSILSVLTGIGMTP 1861
            E+WGFLCPVHTPDGEPCGLLNHMT TCR+TS FDS GNI+DF KIR S++ VL G+GM P
Sbjct: 495  ESWGFLCPVHTPDGEPCGLLNHMTRTCRITSQFDSNGNIRDFLKIRKSVVDVLVGVGMVP 554

Query: 1860 SLPKLVRAGPPEVLAVLLDGRVXXXXXXXIVEKAVSYIRRLKLSESAGIPNDLEVGYVPL 1681
            SLPKLVRAGPP+V+ VLLDG+V       +V + V+Y+RRLK+   + IP DLEVGYVP 
Sbjct: 555  SLPKLVRAGPPKVITVLLDGQVVGSLSSNLVTEVVAYLRRLKVEAPSVIPEDLEVGYVPT 614

Query: 1680 SMGGAYPGLYLFTSPSRFIRPVRNISIPSEEDLDIELIGPFEQVYMEIKCADGGDGGRKN 1501
            SMGG+YPGLYL + PSRFIRPV+N S+PS+   +IEL+GPFEQV+MEI C DGG+GGR N
Sbjct: 615  SMGGSYPGLYLASCPSRFIRPVKNNSVPSD---NIELVGPFEQVFMEISCPDGGNGGRNN 671

Query: 1500 IFPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQAIQFRADQKLY 1321
               ATHEEIHPTGI+SVVANLTPWSDHNQSPRNMYQCQMAKQTMA+S+QA+QFRADQK+Y
Sbjct: 672  SSTATHEEIHPTGIISVVANLTPWSDHNQSPRNMYQCQMAKQTMAYSTQALQFRADQKIY 731

Query: 1320 HLQTPQTPIVRTTAYTKYNMDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMCHGH 1141
            HLQTPQ+P+VRT  YT Y++DE PTGTNAIVAVLA+TG+DMEDAMILNKSSVERGMCHG 
Sbjct: 732  HLQTPQSPVVRTKTYTTYSIDENPTGTNAIVAVLAHTGFDMEDAMILNKSSVERGMCHGQ 791

Query: 1140 IYQLETVDLEDERGNSDHALKLFARSNTDKSMHSSIDSDGLPFVGQIVQPNEPYCSIYNT 961
            IYQ ETVDL D+R  SD+  + F RS  DKS HS ID+DGLP++GQ + PNEPYCSIY+ 
Sbjct: 792  IYQTETVDLSDQRSRSDNGNQSFRRSKVDKSAHSCIDADGLPYIGQKIYPNEPYCSIYDG 851

Query: 960  ISSTTKPFALKGSEPVIVDYVAIDGKNHKKPLQKVNVRFRRSRNPVIGDKFSSRHGQKGV 781
            ++++ K    KG++PVIVD+V++D K+ K P QK N+RFR +RNP+IGDKFSSRHGQKGV
Sbjct: 852  VTNSIKTMKRKGTDPVIVDFVSVDMKSKKHP-QKANIRFRHARNPIIGDKFSSRHGQKGV 910

Query: 780  CSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIGMLFESIAAKGGSLHGKFVDATPFA 601
            CSQLWPDIDMPF+GVTGMRPDLIINPHAFPSRMTI ML ESIAAKGGSL G+FVDATPF 
Sbjct: 911  CSQLWPDIDMPFNGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGSLRGEFVDATPFR 970

Query: 600  SSIKTANGEXXXXXXSLVDELGPMLTSHGFNYHGLEVLYSGVLGIEMPCEIFIGPVYYQR 421
             ++K  NGE       LVD+LG ML   GFNY+G E LYSG LG+E+ CEIF+GPVYYQR
Sbjct: 971  DAVKKPNGEEESKSSLLVDDLGSMLKEKGFNYYGTETLYSGYLGVELKCEIFMGPVYYQR 1030

Query: 420  LRHMVSDKFQVRSTGTLDQVTRQPXXXXXXXXXXRFGEMERDAMLAHGAAYLLHDRLHTC 241
            LRHMVSDKFQVRSTG +DQ+TRQP          RFGEMERDAMLAHGA+YLLHDRLHT 
Sbjct: 1031 LRHMVSDKFQVRSTGLVDQLTRQPIKGRKRGGGIRFGEMERDAMLAHGASYLLHDRLHTS 1090

Query: 240  SDHHIADVCSLCGSILTTSFIQ-PQKRAVREIGGLPPGRIPKKVICHACKTSKGMETVAM 64
            SDHHIADVCSLCGS+LT+S +   QK+ +++IG LPPGR PKKV C +CKTSKGMETVAM
Sbjct: 1091 SDHHIADVCSLCGSLLTSSVVNVQQKKLIQDIGKLPPGRTPKKVTCDSCKTSKGMETVAM 1150

Query: 63   PYVFRYLAAELAAMNIKMTLK 1
            PYVFRYLAAELAAMNIK+TL+
Sbjct: 1151 PYVFRYLAAELAAMNIKVTLQ 1171


>ref|XP_002893589.1| hypothetical protein ARALYDRAFT_313639 [Arabidopsis lyrata subsp.
            lyrata] gi|297339431|gb|EFH69848.1| hypothetical protein
            ARALYDRAFT_313639 [Arabidopsis lyrata subsp. lyrata]
          Length = 1188

 Score = 1619 bits (4193), Expect = 0.0
 Identities = 793/1175 (67%), Positives = 953/1175 (81%), Gaps = 10/1175 (0%)
 Frame = -3

Query: 3495 NSNLPS-PDYKTLQDLIKPHIDSFDHFVDAGLETMLSQIRPIVVFEPYTKTKLQ------ 3337
            +S +P+  D K L +L+  HI+SFD+    GL+ M ++I+P+ V++P T+ +L       
Sbjct: 7    DSTVPTMEDLKELHNLVTHHIESFDYMTQKGLDVMFNRIKPVSVYDPNTENELSNILFFM 66

Query: 3336 -ISFGEHELYPPQKERGVNSFR-EALYPHECREAKINYAGRFSVEVCFQYNDGPVVREKM 3163
             +      ++ PQKE   ++ R E L P ECR+AKI+Y G F  +VCF+YNDG VVR++ 
Sbjct: 67   ILWLENPVVFAPQKESFRSTSRKEPLLPFECRQAKISYTGTFMADVCFKYNDGVVVRDRF 126

Query: 3162 NFGHLPIMLKSKVCHLRGADPQKLIFHKEEASEMGGYFILNGLERLFRLLIIPKRNYPMS 2983
            +FG  PIML SK+C LRGAD +KL+  KE  SEMGGYFILNG+ER+FR +I PKRN+P S
Sbjct: 127  DFGQFPIMLMSKLCSLRGADCRKLLKCKESTSEMGGYFILNGIERVFRCVIAPKRNHPTS 186

Query: 2982 VVRVSFRERQEGYTDKAVLIRCVRDDQSSISVKLYYLQNGSARLGFWIRGREYLLPVGVV 2803
            ++R SFR+R+EGYT+KAV+ RCVRDDQSS++VKLYYL+NGSAR+GFWI GREYLLPVG+V
Sbjct: 187  MIRNSFRDRKEGYTEKAVVTRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLV 246

Query: 2802 LKALIDTNDHEIYVSLTCCYSEKYQRGKGAVGTQLVGERVKIILDEVQALSLCTQLQCLQ 2623
            LKAL +T D EIY SL CCYSE Y RG GA+GTQL+ ER KIILDEV+ L L T+ QC +
Sbjct: 247  LKALTNTCDEEIYESLNCCYSEHYGRGDGAIGTQLIRERAKIILDEVRDLGLFTREQCRK 306

Query: 2622 HLGAYFKPVMDGLETESHLAVGRAVLRDYVFVHLESNHDKFNLLIFMLQKLFALVDQTAT 2443
            HLG +F+PV+DGLE ESH  V  AVLRDY+FVHL+++HDKFNLLIF++QKL++LVDQT+ 
Sbjct: 307  HLGQHFQPVLDGLEKESHPMVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLVDQTSL 366

Query: 2442 PDNPDALQTQEVLLPGHLITIFLKEKLQEWLYKARRLLLEEIKNKGESFEFLSLAHIKKI 2263
            PDNPD+LQ QE+L+PGH+ITI+LKEKL++WL K + LL +E+ N    F F SLA +KK+
Sbjct: 367  PDNPDSLQNQEILVPGHVITIYLKEKLEDWLRKCKSLLKDELLNTSSKFSFESLADVKKL 426

Query: 2262 IDKNPSKNISLTVENMLKTGNLVTQSGLDIQQRAGMTVHAERLNFLRFLSHFRAVHRGAS 2083
            I+KNP ++I  ++E +LKTG L TQSGLD+QQRAG TV AERLNFLRFLS FRAVHRGAS
Sbjct: 427  INKNPPRSIGTSIETLLKTGALKTQSGLDLQQRAGYTVQAERLNFLRFLSFFRAVHRGAS 486

Query: 2082 FAGLRSTSVRKLLPEAWGFLCPVHTPDGEPCGLLNHMTSTCRVTSHFDSQGNIKDFFKIR 1903
            FAGLR+T+VRKLLPE+WGFLCPVHTPDG PCGLLNHMT T R+TS FDS+GNI+DF KIR
Sbjct: 487  FAGLRTTTVRKLLPESWGFLCPVHTPDGTPCGLLNHMTCTSRITSQFDSKGNIRDFLKIR 546

Query: 1902 LSILSVLTGIGMTPSLPKLVRAGPPEVLAVLLDGRVXXXXXXXIVEKAVSYIRRLKLSES 1723
             S++ VLTG GM  SLPKLVRAGPP+V+ VLLDG+V       +V K VSY+RRLK+   
Sbjct: 547  KSVVEVLTGAGMVSSLPKLVRAGPPKVIHVLLDGQVVGTLSSNLVTKVVSYLRRLKVEAP 606

Query: 1722 AGIPNDLEVGYVPLSMGGAYPGLYLFTSPSRFIRPVRNISIPSEEDLDIELIGPFEQVYM 1543
            + IP DLEVGYVP+SMGG+YPGLYL + P+RFIRPV+NISIPSE   +IELIGPFEQV+M
Sbjct: 607  SVIPEDLEVGYVPISMGGSYPGLYLASCPARFIRPVKNISIPSE---NIELIGPFEQVFM 663

Query: 1542 EIKCADGGDGGRKNIFPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMAF 1363
            EI C DGG+GGR N  PATHEEIHPTG++SVVANLTPWSDHNQSPRNMYQCQMAKQTMA+
Sbjct: 664  EISCPDGGNGGRNNSSPATHEEIHPTGMISVVANLTPWSDHNQSPRNMYQCQMAKQTMAY 723

Query: 1362 SSQAIQFRADQKLYHLQTPQTPIVRTTAYTKYNMDEFPTGTNAIVAVLAYTGYDMEDAMI 1183
            S+QA+QFRADQK+YHLQTPQ+P+VRT  YT Y++DE PTGTNAIVAVLA+TG+DMEDAMI
Sbjct: 724  STQALQFRADQKIYHLQTPQSPVVRTKTYTTYSIDENPTGTNAIVAVLAHTGFDMEDAMI 783

Query: 1182 LNKSSVERGMCHGHIYQLETVDLEDERGNSDHALKLFARSNTDKSMHSSIDSDGLPFVGQ 1003
            LNKSSVERGMCHG IYQ E +DL D+    D   K F RS TDKS HS ID+DGLP+VGQ
Sbjct: 784  LNKSSVERGMCHGQIYQTENIDLSDQNSRYDSGHKSFRRSTTDKSDHSRIDADGLPYVGQ 843

Query: 1002 IVQPNEPYCSIYNTISSTTKPFALKGSEPVIVDYVAIDGKNHKKPLQKVNVRFRRSRNPV 823
             + P+EPYC IY+ ++   +    KG++PVIVD+V++D K+ K P QK N+RFR +RNP+
Sbjct: 844  KIYPDEPYCRIYDEVTGKQRLMKGKGTDPVIVDFVSVDMKSKKHP-QKANIRFRHARNPI 902

Query: 822  IGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIGMLFESIAAKG 643
            IGDKFSSRHGQKGVCSQLWPDI+MPF+GVTGMRPDLIINPHAFPSRMTI ML ESIAAKG
Sbjct: 903  IGDKFSSRHGQKGVCSQLWPDIEMPFNGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKG 962

Query: 642  GSLHGKFVDATPFASSIKTANGEXXXXXXSLVDELGPMLTSHGFNYHGLEVLYSGVLGIE 463
            GSLHGKFVDATPF  ++K  NGE       LVD+LG ML   GFNY+G E LYSG LG+E
Sbjct: 963  GSLHGKFVDATPFRDAVKKTNGEKESKSSLLVDDLGSMLKEKGFNYYGTETLYSGSLGVE 1022

Query: 462  MPCEIFIGPVYYQRLRHMVSDKFQVRSTGTLDQVTRQPXXXXXXXXXXRFGEMERDAMLA 283
            + CEIF+GPVYYQRLRHMVSDKFQVRSTG +DQ+T QP          RFGEMERD++LA
Sbjct: 1023 LKCEIFMGPVYYQRLRHMVSDKFQVRSTGQVDQLTHQPIKGRKRGGGIRFGEMERDSLLA 1082

Query: 282  HGAAYLLHDRLHTCSDHHIADVCSLCGSILTTSFIQ-PQKRAVREIGGLPPGRIPKKVIC 106
            HGA+YLLHDRLHT SDHHIADVCSLCGS+LT+S +   QK+ ++  G LPPGR PKKV C
Sbjct: 1083 HGASYLLHDRLHTSSDHHIADVCSLCGSLLTSSVVNVQQKKLIKVNGKLPPGRTPKKVTC 1142

Query: 105  HACKTSKGMETVAMPYVFRYLAAELAAMNIKMTLK 1
            H+C TSKGMETVAMPYVFRYLAAELA+MNIKMTL+
Sbjct: 1143 HSCGTSKGMETVAMPYVFRYLAAELASMNIKMTLQ 1177


>ref|NP_564341.2| nuclear RNA polymerase A2 [Arabidopsis thaliana]
            gi|332193031|gb|AEE31152.1| nuclear RNA polymerase A2
            [Arabidopsis thaliana]
          Length = 1178

 Score = 1614 bits (4180), Expect = 0.0
 Identities = 791/1168 (67%), Positives = 955/1168 (81%), Gaps = 3/1168 (0%)
 Frame = -3

Query: 3495 NSNLPS-PDYKTLQDLIKPHIDSFDHFVDAGLETMLSQIRPIVVFEPYTKTKLQISFGEH 3319
            +S +P+  D+K L +L+  HI+SFD+    GL+ M ++I+P+ V++P T+ +L I     
Sbjct: 7    DSTVPTMEDFKELHNLVTHHIESFDYMTLKGLDVMFNRIKPVSVYDPNTENELSIWLENP 66

Query: 3318 ELYPPQKERGVNSFR-EALYPHECREAKINYAGRFSVEVCFQYNDGPVVREKMNFGHLPI 3142
             ++ PQKE   ++ R E L P ECR+AKI+Y G F  +VCF+YNDG VVR+K +FG  PI
Sbjct: 67   LVFAPQKESFKSTSRKEPLLPFECRQAKISYTGTFMADVCFKYNDGVVVRDKFDFGQFPI 126

Query: 3141 MLKSKVCHLRGADPQKLIFHKEEASEMGGYFILNGLERLFRLLIIPKRNYPMSVVRVSFR 2962
            ML SK+C L+GAD +KL+  KE  SEMGGYFILNG+ER+FR +I PKRN+P S++R SFR
Sbjct: 127  MLMSKLCSLKGADCRKLLKCKESTSEMGGYFILNGIERVFRCVIAPKRNHPTSMIRNSFR 186

Query: 2961 ERQEGYTDKAVLIRCVRDDQSSISVKLYYLQNGSARLGFWIRGREYLLPVGVVLKALIDT 2782
            +R+EGY+ KAV+ RCVRDDQSS++VKLYYL+NGSAR+GFWI GREYLLPVG+VLKAL ++
Sbjct: 187  DRKEGYSSKAVVTRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNS 246

Query: 2781 NDHEIYVSLTCCYSEKYQRGKGAVGTQLVGERVKIILDEVQALSLCTQLQCLQHLGAYFK 2602
             D EIY SL CCYSE Y RG GA+GTQLV ER KIILDEV+ L L T+ QC +HLG +F+
Sbjct: 247  CDEEIYESLNCCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQ 306

Query: 2601 PVMDGLETESHLAVGRAVLRDYVFVHLESNHDKFNLLIFMLQKLFALVDQTATPDNPDAL 2422
            PV+DG++ ES   V  AVLRDY+FVHL+++HDKFNLLIF++QKL++LVDQT+ PDNPD+L
Sbjct: 307  PVLDGVKKESLSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLVDQTSLPDNPDSL 366

Query: 2421 QTQEVLLPGHLITIFLKEKLQEWLYKARRLLLEEIKNKGESFEFLSLAHIKKIIDKNPSK 2242
            Q QE+L+PGH+ITI+LKEKL+EWL K + LL +E+ N    F F SLA +KK+I+KNP +
Sbjct: 367  QNQEILVPGHVITIYLKEKLEEWLRKCKSLLKDELDNTNSKFSFESLADVKKLINKNPPR 426

Query: 2241 NISLTVENMLKTGNLVTQSGLDIQQRAGMTVHAERLNFLRFLSHFRAVHRGASFAGLRST 2062
            +I  ++E +LKTG L TQSGLD+QQRAG TV AERLNFLRFLS FRAVHRGASFAGLR+T
Sbjct: 427  SIGTSIETLLKTGALKTQSGLDLQQRAGYTVQAERLNFLRFLSFFRAVHRGASFAGLRTT 486

Query: 2061 SVRKLLPEAWGFLCPVHTPDGEPCGLLNHMTSTCRVTSHFDSQGNIKDFFKIRLSILSVL 1882
            +VRKLLPE+WGFLCPVHTPDG PCGLLNHMT T R+TS FDS+GNI+DF KIR S++ VL
Sbjct: 487  TVRKLLPESWGFLCPVHTPDGTPCGLLNHMTRTSRITSQFDSKGNIRDFLKIRKSVVDVL 546

Query: 1881 TGIGMTPSLPKLVRAGPPEVLAVLLDGRVXXXXXXXIVEKAVSYIRRLKLSESAGIPNDL 1702
            TG GM PSLPKLVRAGPP+V+ VLLDG+V       +V K VSYIRRLK+   + IP DL
Sbjct: 547  TGAGMVPSLPKLVRAGPPKVIHVLLDGQVVGTLSSNLVTKVVSYIRRLKVEAPSVIPEDL 606

Query: 1701 EVGYVPLSMGGAYPGLYLFTSPSRFIRPVRNISIPSEEDLDIELIGPFEQVYMEIKCADG 1522
            EVGYVP SMGG+YPGLYL + P+RFIRPV+NISIPS+   +IELIGPFEQV+MEI C DG
Sbjct: 607  EVGYVPTSMGGSYPGLYLASCPARFIRPVKNISIPSD---NIELIGPFEQVFMEISCPDG 663

Query: 1521 GDGGRKNIFPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQAIQF 1342
            G+GGR N   ATHEEIHPTG++SVVANLTPWSDHNQSPRNMYQCQMAKQTMA+S+QA+QF
Sbjct: 664  GNGGRNNSSLATHEEIHPTGMISVVANLTPWSDHNQSPRNMYQCQMAKQTMAYSTQALQF 723

Query: 1341 RADQKLYHLQTPQTPIVRTTAYTKYNMDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVE 1162
            RADQK+YHLQTPQ+P+VRT  YT Y++DE PTGTNAIVAVLA+TG+DMEDAMILNKSSVE
Sbjct: 724  RADQKIYHLQTPQSPVVRTKTYTTYSIDENPTGTNAIVAVLAHTGFDMEDAMILNKSSVE 783

Query: 1161 RGMCHGHIYQLETVDLEDERGNSDHALKLFARSNTDKSMHSSIDSDGLPFVGQIVQPNEP 982
            RGMCHG IYQ E +DL D+    D   K F RS T+K+ H  ID+DGLP VGQ + P+EP
Sbjct: 784  RGMCHGQIYQTENIDLSDQNSRFDSGSKSFRRS-TNKAEHFRIDADGLPSVGQKLYPDEP 842

Query: 981  YCSIYNTISSTTKPFALKGSEPVIVDYVAIDGKNHKKPLQKVNVRFRRSRNPVIGDKFSS 802
            YCSIY+ +++ T+    KG++PVIVD+V++D K+ K P Q+ N+RFR +RNP+IGDKFSS
Sbjct: 843  YCSIYDEVTNKTRHMKRKGTDPVIVDFVSVDMKSKKHP-QRANIRFRHARNPIIGDKFSS 901

Query: 801  RHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIGMLFESIAAKGGSLHGKF 622
            RHGQKGVCSQLWPDIDMPF+GVTGMRPDLIINPHAFPSRMTI ML ESIAAKGGSLHGKF
Sbjct: 902  RHGQKGVCSQLWPDIDMPFNGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGSLHGKF 961

Query: 621  VDATPFASSIKTANGEXXXXXXSLVDELGPMLTSHGFNYHGLEVLYSGVLGIEMPCEIFI 442
            VDATPF  ++K  NGE       LVD+LG ML   GFN++G E LYSG LG+E+ CEIF+
Sbjct: 962  VDATPFRDAVKKTNGEEESKSSLLVDDLGSMLKEKGFNHYGTETLYSGYLGVELKCEIFM 1021

Query: 441  GPVYYQRLRHMVSDKFQVRSTGTLDQVTRQPXXXXXXXXXXRFGEMERDAMLAHGAAYLL 262
            GPVYYQRLRHMVSDKFQVRSTG +DQ+T QP          RFGEMERD++LAHGA+YLL
Sbjct: 1022 GPVYYQRLRHMVSDKFQVRSTGQVDQLTHQPIKGRKRGGGIRFGEMERDSLLAHGASYLL 1081

Query: 261  HDRLHTCSDHHIADVCSLCGSILTTSFIQ-PQKRAVREIGGLPPGRIPKKVICHACKTSK 85
            HDRLHT SDHHIADVCSLCGS+LT+S +   QK+ ++EIG LPPGR PKKV C++CKTSK
Sbjct: 1082 HDRLHTSSDHHIADVCSLCGSLLTSSVVNVQQKKLIQEIGKLPPGRTPKKVTCYSCKTSK 1141

Query: 84   GMETVAMPYVFRYLAAELAAMNIKMTLK 1
            GMETVAMPYVFRYLAAELA+MNIKMTL+
Sbjct: 1142 GMETVAMPYVFRYLAAELASMNIKMTLQ 1169


>ref|XP_006306612.1| hypothetical protein CARUB_v10008127mg [Capsella rubella]
            gi|482575323|gb|EOA39510.1| hypothetical protein
            CARUB_v10008127mg [Capsella rubella]
          Length = 1171

 Score = 1611 bits (4171), Expect = 0.0
 Identities = 786/1170 (67%), Positives = 946/1170 (80%), Gaps = 5/1170 (0%)
 Frame = -3

Query: 3495 NSNLPS-PDYKTLQDLIKPHIDSFDHFVDAGLETMLSQIRPIVVFEPYTKTKLQISFGEH 3319
            +S +P+  D+K L +L+  HI+SFD+  D GLE M ++I+P+                  
Sbjct: 7    DSTVPNIEDFKELHNLVTHHIESFDYMTDKGLEVMFNRIKPVT---------------NP 51

Query: 3318 ELYPPQKER-GVNSFREALYPHECREAKINYAGRFSVEVCFQYNDGPVVREKMNFGHLPI 3142
             ++ PQKE     S +E L+P ECR+AKI+Y G F  +VCF+YN+G VVR+K +FG  PI
Sbjct: 52   VVFAPQKESFSSTSRKEPLFPFECRQAKISYTGTFMADVCFKYNEGVVVRDKFDFGQFPI 111

Query: 3141 MLKSKVCHLRGADPQKLIFHKEEASEMGGYFILNGLERLFRLLIIPKRNYPMSVVRVSFR 2962
            ML SK+C LRGAD +KL+  KE  SEMGGYF+LNG+ER+FR +I PKRN+P S++R SFR
Sbjct: 112  MLMSKLCSLRGADCRKLLKCKESTSEMGGYFVLNGIERVFRCVIAPKRNHPTSMIRNSFR 171

Query: 2961 ERQEGYTDKAVLIRCVRDDQSSISVKLYYLQNGSARLGFWIRGREYLLPVGVVLKALIDT 2782
            +R+EGY+DKAV IRCVRDDQSS++VKLYYL+NGSAR+GFWI GREYLLPVG+VLKAL  T
Sbjct: 172  DRREGYSDKAVAIRCVRDDQSSVTVKLYYLRNGSARVGFWIGGREYLLPVGLVLKALTKT 231

Query: 2781 NDHEIYVSLTCCYSEKYQRGKGAVGTQLVGERVKIILDEVQALSLCTQLQCLQHLGAYFK 2602
            ND E+Y SL CCY+E Y RG GA+GTQLV ER K+ILDEV+ + L T+ QC +HLG +F+
Sbjct: 232  NDEEVYKSLNCCYNENYGRGDGAIGTQLVRERAKVILDEVRDMGLFTREQCRKHLGEHFQ 291

Query: 2601 PVMDGLETESHLAVGRAVLRDYVFVHLESNHDKFNLLIFMLQKLFALVDQTATPDNPDAL 2422
            PV+DGLE ES+  V  AVLRDY+FVHL+++HDKFNLLIF++QKL++LVDQT+ PDNPD+L
Sbjct: 292  PVLDGLEKESYPTVAEAVLRDYIFVHLDNDHDKFNLLIFLIQKLYSLVDQTSLPDNPDSL 351

Query: 2421 QTQEVLLPGHLITIFLKEKLQEWLYKARRLLLEEIKNKG--ESFEFLSLAHIKKIIDKNP 2248
            Q QE+L+PGHLIT++LKEKL+EWL K + LL +E+ N      F F SLA +KK+ +KNP
Sbjct: 352  QNQEILVPGHLITVYLKEKLEEWLRKCKSLLKDELHNTSSKSKFSFESLADVKKLFNKNP 411

Query: 2247 SKNISLTVENMLKTGNLVTQSGLDIQQRAGMTVHAERLNFLRFLSHFRAVHRGASFAGLR 2068
             +++ +++E +LKTG + TQSGLD+QQRAG TV AERLNFLRFLS FRAVHRGASFAGLR
Sbjct: 412  PRSVGMSIETLLKTGRMNTQSGLDLQQRAGYTVQAERLNFLRFLSFFRAVHRGASFAGLR 471

Query: 2067 STSVRKLLPEAWGFLCPVHTPDGEPCGLLNHMTSTCRVTSHFDSQGNIKDFFKIRLSILS 1888
            +T+VRKLLPE+WGFLCPVHTPDGEPCGLLNHMT T R+TS FDS+GNI+DF KIR S++ 
Sbjct: 472  TTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTRTSRITSQFDSKGNIRDFLKIRKSVVE 531

Query: 1887 VLTGIGMTPSLPKLVRAGPPEVLAVLLDGRVXXXXXXXIVEKAVSYIRRLKLSESAGIPN 1708
            VL G GM  SLPKLV+A PPEV+ VLLDG+V       +V   VSY+RRLK+   + IP 
Sbjct: 532  VLIGAGMVSSLPKLVQAAPPEVIHVLLDGQVVGTLSSNLVTNVVSYLRRLKIEAPSVIPE 591

Query: 1707 DLEVGYVPLSMGGAYPGLYLFTSPSRFIRPVRNISIPSEEDLDIELIGPFEQVYMEIKCA 1528
            DLEVGYVP SMGG+YPGLYL + P+RFIRPV+NISIPSE    IELIGPFEQV+MEI C 
Sbjct: 592  DLEVGYVPTSMGGSYPGLYLASCPARFIRPVKNISIPSE---SIELIGPFEQVFMEISCP 648

Query: 1527 DGGDGGRKNIFPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQAI 1348
            DGG+GGR N  PATHEEIHPTG++SVVANLTPWSDHNQSPRNMYQCQMAKQTMA+S+QA+
Sbjct: 649  DGGNGGRNNSCPATHEEIHPTGMISVVANLTPWSDHNQSPRNMYQCQMAKQTMAYSTQAL 708

Query: 1347 QFRADQKLYHLQTPQTPIVRTTAYTKYNMDEFPTGTNAIVAVLAYTGYDMEDAMILNKSS 1168
            QFRADQK+YHLQTPQ+P+VRT  YT Y++DE PTGTNAIVAVLA+TG+DMEDAMILNKSS
Sbjct: 709  QFRADQKIYHLQTPQSPVVRTKTYTTYSIDENPTGTNAIVAVLAHTGFDMEDAMILNKSS 768

Query: 1167 VERGMCHGHIYQLETVDLEDERGNSDHALKLFARSNTDKSMHSSIDSDGLPFVGQIVQPN 988
            VERGMCHG IYQ E +DL D+    D   K F RS TDKS HS+ID+DGLP+VGQ + P+
Sbjct: 769  VERGMCHGQIYQTENIDLSDQNSRYDSGHKSFRRSTTDKSDHSTIDADGLPYVGQKIYPD 828

Query: 987  EPYCSIYNTISSTTKPFALKGSEPVIVDYVAIDGKNHKKPLQKVNVRFRRSRNPVIGDKF 808
            EPY SIY+ +++  +    KG++PVIVD+V++D K+ K P QK N+RFR +RNP+IGDKF
Sbjct: 829  EPYYSIYDEVTNRIRTIKRKGTDPVIVDFVSVDMKSKKHP-QKANIRFRHARNPIIGDKF 887

Query: 807  SSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIGMLFESIAAKGGSLHG 628
            SSRHGQKGVCSQLWPDIDMPF+GVTGMRPDLIINPHAFPSRMTI ML ESIAAKGGSLHG
Sbjct: 888  SSRHGQKGVCSQLWPDIDMPFNGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGSLHG 947

Query: 627  KFVDATPFASSIKTANGEXXXXXXSLVDELGPMLTSHGFNYHGLEVLYSGVLGIEMPCEI 448
            KFVDATPF +++  ANGE       LVD+LG ML   GFNY+G E LYSG+LG+E+ CEI
Sbjct: 948  KFVDATPFRNAVINANGEKKRKSSLLVDDLGSMLKEKGFNYYGTEKLYSGILGVELECEI 1007

Query: 447  FIGPVYYQRLRHMVSDKFQVRSTGTLDQVTRQPXXXXXXXXXXRFGEMERDAMLAHGAAY 268
            F+GPVYYQRLRHMVSDKFQVRSTG +DQ+T QP          RFGEMERD++LAHGA+Y
Sbjct: 1008 FMGPVYYQRLRHMVSDKFQVRSTGQVDQLTHQPIKGRKRGGGIRFGEMERDSLLAHGASY 1067

Query: 267  LLHDRLHTCSDHHIADVCSLCGSILTTSFIQ-PQKRAVREIGGLPPGRIPKKVICHACKT 91
            LLHDRLHT SDHHIADVCSLCGS+LT+S     QK+ ++  G LPPGR PKKV C++CKT
Sbjct: 1068 LLHDRLHTSSDHHIADVCSLCGSLLTSSIANVQQKKLIQVTGKLPPGRTPKKVTCYSCKT 1127

Query: 90   SKGMETVAMPYVFRYLAAELAAMNIKMTLK 1
            SKGMETVAMPYVFRYLAAELA+MNIKMTLK
Sbjct: 1128 SKGMETVAMPYVFRYLAAELASMNIKMTLK 1157