BLASTX nr result

ID: Akebia26_contig00021093 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia26_contig00021093
         (277 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004238386.1| PREDICTED: RNA pseudourine synthase 2, chlor...    57   2e-06
ref|XP_006342081.1| PREDICTED: RNA pseudouridine synthase 2, chl...    57   3e-06
gb|EXB81509.1| RNA pseudourine synthase 2 [Morus notabilis]            56   6e-06

>ref|XP_004238386.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Solanum
           lycopersicum]
          Length = 436

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 30/57 (52%), Positives = 41/57 (71%)
 Frame = +2

Query: 89  DSVFDQSQEPLSIRRGN*TGVRLQQTVEKGSVKSRIDSWVSSLISCVSRARIQSSIQ 259
           DS  D S + +  RR N +GV+L++TV+  + K R+DSWVSS I  VSRAR+QSSI+
Sbjct: 38  DSDSDDSPDEIPGRRSNYSGVKLEETVDSKTGKLRLDSWVSSRIDGVSRARVQSSIR 94


>ref|XP_006342081.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like
           [Solanum tuberosum]
          Length = 431

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 30/57 (52%), Positives = 41/57 (71%)
 Frame = +2

Query: 89  DSVFDQSQEPLSIRRGN*TGVRLQQTVEKGSVKSRIDSWVSSLISCVSRARIQSSIQ 259
           DS  D S + +  RR N +GV+L++TV+  + K R+DSWVSS I  VSRAR+QSSI+
Sbjct: 38  DSDSDDSPDEIPGRRSNYSGVKLEETVDGKTGKLRLDSWVSSRIDGVSRARVQSSIR 94


>gb|EXB81509.1| RNA pseudourine synthase 2 [Morus notabilis]
          Length = 369

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 29/56 (51%), Positives = 41/56 (73%)
 Frame = +2

Query: 92  SVFDQSQEPLSIRRGN*TGVRLQQTVEKGSVKSRIDSWVSSLISCVSRARIQSSIQ 259
           S+ D+++E L+  R N  GVRL+ TV   S K R+DSW+SS +S +SRAR+QSSI+
Sbjct: 59  SISDRNEEVLAGVRPNFAGVRLEATVAVDSGKVRLDSWISSRVSGISRARVQSSIR 114


Top