BLASTX nr result
ID: Akebia26_contig00020651
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Akebia26_contig00020651 (523 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002515428.1| DNA-directed RNA polymerase subunit, putativ... 293 2e-77 emb|CBI21137.3| unnamed protein product [Vitis vinifera] 289 2e-76 ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerase D sub... 289 2e-76 ref|XP_006364477.1| PREDICTED: DNA-directed RNA polymerases IV a... 288 7e-76 gb|AAY68198.1| RNA polymerase IV second largest subunit [Rhodode... 288 7e-76 ref|XP_004145500.1| PREDICTED: DNA-directed RNA polymerase D sub... 287 9e-76 ref|XP_004245914.1| PREDICTED: DNA-directed RNA polymerase D sub... 286 2e-75 gb|ABG29322.1| DNA-directed RNA polymerase II 135 kDa polypeptid... 286 2e-75 ref|XP_006442883.1| hypothetical protein CICLE_v10018562mg [Citr... 286 2e-75 ref|XP_006351506.1| PREDICTED: DNA-directed RNA polymerases IV a... 285 5e-75 ref|XP_004236361.1| PREDICTED: DNA-directed RNA polymerase D sub... 285 5e-75 ref|XP_002324332.2| DNA-directed RNA polymerase family protein [... 285 6e-75 ref|XP_007011718.1| DNA-directed RNA polymerase isoform 2 [Theob... 283 1e-74 ref|XP_007011717.1| DNA-directed RNA polymerase isoform 1 [Theob... 283 1e-74 ref|XP_002447199.1| hypothetical protein SORBIDRAFT_06g030300 [S... 283 2e-74 gb|ADB19859.1| mutant required to maintain repression 7-2/ RNA p... 283 2e-74 ref|NP_001177299.1| required to maintain repression7 [Zea mays] ... 283 2e-74 gb|AAY45706.1| RNA polymerase IV second largest subunit [Zea mays] 283 2e-74 gb|AFW59623.1| putative DNA-directed RNA polymerase subunit fami... 282 3e-74 gb|EEE61785.1| hypothetical protein OsJ_16357 [Oryza sativa Japo... 282 3e-74 >ref|XP_002515428.1| DNA-directed RNA polymerase subunit, putative [Ricinus communis] gi|223545372|gb|EEF46877.1| DNA-directed RNA polymerase subunit, putative [Ricinus communis] Length = 1203 Score = 293 bits (750), Expect = 2e-77 Identities = 136/158 (86%), Positives = 148/158 (93%) Frame = +2 Query: 2 RSGYSRWGSERLYNGHNGEMMRALIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVA 181 R+G+SRWG+ER+YNG GEM+R+LIF+GPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVA Sbjct: 1037 RAGFSRWGNERVYNGRTGEMVRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVA 1096 Query: 182 DRKRFGGIKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHICGKCKNITNVIQRAVPGG 361 DRKRFGGIKFGEMERDCL+AHGA+ANLHERLF LSD SQMHIC KCKN+ NVIQRAVPGG Sbjct: 1097 DRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHICQKCKNVANVIQRAVPGG 1156 Query: 362 GKIRGPYCRFCDSSENIVKVNVPYGAKLLCQELFSMGI 475 KIRGPYCR C+S + IVKVNVPYGAKLLCQELFSMGI Sbjct: 1157 RKIRGPYCRVCESVDEIVKVNVPYGAKLLCQELFSMGI 1194 >emb|CBI21137.3| unnamed protein product [Vitis vinifera] Length = 1220 Score = 289 bits (740), Expect = 2e-76 Identities = 133/158 (84%), Positives = 148/158 (93%) Frame = +2 Query: 2 RSGYSRWGSERLYNGHNGEMMRALIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVA 181 R+G+SRWG ER+YNG GEM+R+LIF+GPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPV+ Sbjct: 1054 RAGFSRWGHERVYNGRTGEMLRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVS 1113 Query: 182 DRKRFGGIKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHICGKCKNITNVIQRAVPGG 361 DRKRFGGIKFGEMERDCL+AHGAAANLHERLF LSD + MHIC +CKNI+NVIQR+V GG Sbjct: 1114 DRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSAYMHICRRCKNISNVIQRSVAGG 1173 Query: 362 GKIRGPYCRFCDSSENIVKVNVPYGAKLLCQELFSMGI 475 K+RGPYCR+C+SSE IVKVNVPYGAKLLCQELFSMGI Sbjct: 1174 RKVRGPYCRYCESSEEIVKVNVPYGAKLLCQELFSMGI 1211 >ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Vitis vinifera] Length = 1198 Score = 289 bits (740), Expect = 2e-76 Identities = 133/158 (84%), Positives = 148/158 (93%) Frame = +2 Query: 2 RSGYSRWGSERLYNGHNGEMMRALIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVA 181 R+G+SRWG ER+YNG GEM+R+LIF+GPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPV+ Sbjct: 1032 RAGFSRWGHERVYNGRTGEMLRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVS 1091 Query: 182 DRKRFGGIKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHICGKCKNITNVIQRAVPGG 361 DRKRFGGIKFGEMERDCL+AHGAAANLHERLF LSD + MHIC +CKNI+NVIQR+V GG Sbjct: 1092 DRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSAYMHICRRCKNISNVIQRSVAGG 1151 Query: 362 GKIRGPYCRFCDSSENIVKVNVPYGAKLLCQELFSMGI 475 K+RGPYCR+C+SSE IVKVNVPYGAKLLCQELFSMGI Sbjct: 1152 RKVRGPYCRYCESSEEIVKVNVPYGAKLLCQELFSMGI 1189 >ref|XP_006364477.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like [Solanum tuberosum] Length = 1219 Score = 288 bits (736), Expect = 7e-76 Identities = 135/156 (86%), Positives = 147/156 (94%) Frame = +2 Query: 8 GYSRWGSERLYNGHNGEMMRALIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADR 187 G+SRWGSER+YNG GEM+ +LIF+GPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADR Sbjct: 1056 GFSRWGSERVYNGRTGEMVHSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADR 1115 Query: 188 KRFGGIKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHICGKCKNITNVIQRAVPGGGK 367 KRFGGIKFGEMERDCL+AHGAAANLHERLF LSD SQMHICGKCKN+ NVIQR+ P GGK Sbjct: 1116 KRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICGKCKNMANVIQRSAP-GGK 1174 Query: 368 IRGPYCRFCDSSENIVKVNVPYGAKLLCQELFSMGI 475 IRGP+CRFC+S E+IVKV+VPYGAKLLCQELFSMGI Sbjct: 1175 IRGPFCRFCESVEDIVKVDVPYGAKLLCQELFSMGI 1210 >gb|AAY68198.1| RNA polymerase IV second largest subunit [Rhododendron macrophyllum] Length = 1019 Score = 288 bits (736), Expect = 7e-76 Identities = 134/158 (84%), Positives = 145/158 (91%) Frame = +2 Query: 2 RSGYSRWGSERLYNGHNGEMMRALIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVA 181 R+G+SRWGSER+YNG GEM+ +L+F+GPTFYQRL HM+EDKVKFRNTGPVHPLTRQPVA Sbjct: 853 RAGFSRWGSERVYNGRTGEMIHSLVFMGPTFYQRLTHMSEDKVKFRNTGPVHPLTRQPVA 912 Query: 182 DRKRFGGIKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHICGKCKNITNVIQRAVPGG 361 DRKRFGGIKFGEMERDCL+AHGAAANLHERLF LSD SQMHIC KC NI NVIQRAVPGG Sbjct: 913 DRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICRKCNNIANVIQRAVPGG 972 Query: 362 GKIRGPYCRFCDSSENIVKVNVPYGAKLLCQELFSMGI 475 KIRGPYCRFC+S E IV+VNVPYGAKLL QELFSMGI Sbjct: 973 RKIRGPYCRFCESVEEIVRVNVPYGAKLLAQELFSMGI 1010 >ref|XP_004145500.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Cucumis sativus] Length = 1197 Score = 287 bits (735), Expect = 9e-76 Identities = 132/158 (83%), Positives = 148/158 (93%) Frame = +2 Query: 2 RSGYSRWGSERLYNGHNGEMMRALIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVA 181 R+G+SRWGSER+YNG GEMMR+LIF+GPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVA Sbjct: 1031 RAGFSRWGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVA 1090 Query: 182 DRKRFGGIKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHICGKCKNITNVIQRAVPGG 361 DRKRFGGIKFGEMERDCL+AHGA+ANLHERLF LSD SQMH+C KCKN+ +VIQR+V GG Sbjct: 1091 DRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVASVIQRSVAGG 1150 Query: 362 GKIRGPYCRFCDSSENIVKVNVPYGAKLLCQELFSMGI 475 K+RGPYCR C+S ++IV+VNVPYGAKLLCQELFSMGI Sbjct: 1151 RKMRGPYCRVCESFDDIVRVNVPYGAKLLCQELFSMGI 1188 >ref|XP_004245914.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Solanum lycopersicum] Length = 1219 Score = 286 bits (733), Expect = 2e-75 Identities = 134/156 (85%), Positives = 146/156 (93%) Frame = +2 Query: 8 GYSRWGSERLYNGHNGEMMRALIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADR 187 G+SRWG+ER+YNG GEM+ +LIF+GPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADR Sbjct: 1056 GFSRWGNERVYNGRTGEMVHSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADR 1115 Query: 188 KRFGGIKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHICGKCKNITNVIQRAVPGGGK 367 KRFGGIKFGEMERDCL+AHGAAANLHERLF LSD SQMHICGKCKN+ NVIQR VP GGK Sbjct: 1116 KRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICGKCKNMANVIQRPVP-GGK 1174 Query: 368 IRGPYCRFCDSSENIVKVNVPYGAKLLCQELFSMGI 475 +RGP+CRFC+S E+IVKV VPYGAKLLCQELFSMGI Sbjct: 1175 VRGPFCRFCESVEDIVKVGVPYGAKLLCQELFSMGI 1210 >gb|ABG29322.1| DNA-directed RNA polymerase II 135 kDa polypeptide, putative [Solanum bulbocastanum] Length = 304 Score = 286 bits (733), Expect = 2e-75 Identities = 134/156 (85%), Positives = 147/156 (94%) Frame = +2 Query: 8 GYSRWGSERLYNGHNGEMMRALIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADR 187 G+SRWG+ER+YNG GEM+ +LIF+GPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADR Sbjct: 141 GFSRWGNERVYNGRTGEMVHSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADR 200 Query: 188 KRFGGIKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHICGKCKNITNVIQRAVPGGGK 367 KRFGGIKFGEMERDCL+AHGAAANLHERLF LSD SQMHICGKCKN+ NVIQR+ P GGK Sbjct: 201 KRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICGKCKNMANVIQRSAP-GGK 259 Query: 368 IRGPYCRFCDSSENIVKVNVPYGAKLLCQELFSMGI 475 IRGP+CRFC+S E+IVKV+VPYGAKLLCQELFSMGI Sbjct: 260 IRGPFCRFCESVEDIVKVDVPYGAKLLCQELFSMGI 295 >ref|XP_006442883.1| hypothetical protein CICLE_v10018562mg [Citrus clementina] gi|568850178|ref|XP_006478802.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like [Citrus sinensis] gi|557545145|gb|ESR56123.1| hypothetical protein CICLE_v10018562mg [Citrus clementina] Length = 1198 Score = 286 bits (732), Expect = 2e-75 Identities = 132/158 (83%), Positives = 145/158 (91%) Frame = +2 Query: 2 RSGYSRWGSERLYNGHNGEMMRALIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVA 181 R+G+S+WG+ERLY+G GEM+R+LIFIGPTFYQRLIHM+EDKVKFRNTGPVHPLTRQPVA Sbjct: 1032 RAGFSKWGTERLYDGRTGEMVRSLIFIGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVA 1091 Query: 182 DRKRFGGIKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHICGKCKNITNVIQRAVPGG 361 DRKRFGGIKFGEMERDCL+AHGAAANLHERLF LSD QMHIC KCKN+ NVIQR V GG Sbjct: 1092 DRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSYQMHICRKCKNVANVIQRVVGGG 1151 Query: 362 GKIRGPYCRFCDSSENIVKVNVPYGAKLLCQELFSMGI 475 K+RGPYCR CDS ++IVK NVPYGAKLLCQELFSMGI Sbjct: 1152 RKVRGPYCRICDSGDDIVKANVPYGAKLLCQELFSMGI 1189 >ref|XP_006351506.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like [Solanum tuberosum] Length = 1217 Score = 285 bits (729), Expect = 5e-75 Identities = 133/156 (85%), Positives = 146/156 (93%) Frame = +2 Query: 8 GYSRWGSERLYNGHNGEMMRALIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADR 187 G++RWG+ER+YNG GEM+ +LIF+GPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADR Sbjct: 1054 GFTRWGNERVYNGRTGEMVHSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADR 1113 Query: 188 KRFGGIKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHICGKCKNITNVIQRAVPGGGK 367 KRFGGIKFGEMERDCL+AHGAAANLHERLF LSD SQMHICGKCKN+ NVIQR V GGK Sbjct: 1114 KRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICGKCKNMANVIQRTVQ-GGK 1172 Query: 368 IRGPYCRFCDSSENIVKVNVPYGAKLLCQELFSMGI 475 +RGP+CRFC+S E+IVKVNVPYGAKLLCQELFSMGI Sbjct: 1173 VRGPFCRFCESVEDIVKVNVPYGAKLLCQELFSMGI 1208 >ref|XP_004236361.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a [Solanum lycopersicum] Length = 1217 Score = 285 bits (729), Expect = 5e-75 Identities = 133/156 (85%), Positives = 146/156 (93%) Frame = +2 Query: 8 GYSRWGSERLYNGHNGEMMRALIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADR 187 G++RWG+ER+YNG GEM+ +LIF+GPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADR Sbjct: 1054 GFTRWGNERVYNGRTGEMVHSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADR 1113 Query: 188 KRFGGIKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHICGKCKNITNVIQRAVPGGGK 367 KRFGGIKFGEMERDCL+AHGAAANLHERLF LSD SQMHICGKCKN+ NVIQR V GGK Sbjct: 1114 KRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICGKCKNMANVIQRTVQ-GGK 1172 Query: 368 IRGPYCRFCDSSENIVKVNVPYGAKLLCQELFSMGI 475 +RGP+CRFC+S E+IVKVNVPYGAKLLCQELFSMGI Sbjct: 1173 VRGPFCRFCESVEDIVKVNVPYGAKLLCQELFSMGI 1208 >ref|XP_002324332.2| DNA-directed RNA polymerase family protein [Populus trichocarpa] gi|550317882|gb|EEF02897.2| DNA-directed RNA polymerase family protein [Populus trichocarpa] Length = 1181 Score = 285 bits (728), Expect = 6e-75 Identities = 130/158 (82%), Positives = 147/158 (93%) Frame = +2 Query: 2 RSGYSRWGSERLYNGHNGEMMRALIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVA 181 R+ +SRWG+ER+YNG GEM+R+LIF+GPTFYQRL+HMAEDKVKFRNTGPVHPLTRQPVA Sbjct: 1015 RAKFSRWGNERVYNGRTGEMVRSLIFMGPTFYQRLVHMAEDKVKFRNTGPVHPLTRQPVA 1074 Query: 182 DRKRFGGIKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHICGKCKNITNVIQRAVPGG 361 DRKRFGGIKFGEMERDCL+AHGA+ANLHERLF LSD S+MHIC KCKN+ NVIQR VPGG Sbjct: 1075 DRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSEMHICQKCKNVANVIQRGVPGG 1134 Query: 362 GKIRGPYCRFCDSSENIVKVNVPYGAKLLCQELFSMGI 475 KIRGPYCR C+S +++VKV+VPYGAKLLCQELFSMGI Sbjct: 1135 RKIRGPYCRVCESVDDLVKVSVPYGAKLLCQELFSMGI 1172 >ref|XP_007011718.1| DNA-directed RNA polymerase isoform 2 [Theobroma cacao] gi|508782081|gb|EOY29337.1| DNA-directed RNA polymerase isoform 2 [Theobroma cacao] Length = 961 Score = 283 bits (725), Expect = 1e-74 Identities = 130/158 (82%), Positives = 146/158 (92%) Frame = +2 Query: 2 RSGYSRWGSERLYNGHNGEMMRALIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVA 181 R+G+SRWG+ER+YNG GEM+R+LIF+GPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVA Sbjct: 795 RAGFSRWGNERVYNGRTGEMVRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVA 854 Query: 182 DRKRFGGIKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHICGKCKNITNVIQRAVPGG 361 DRKR+GGIKFGEMERDCL+AHGA+ANLHERL LSD SQMH+C CKN+ NVI+RAVPGG Sbjct: 855 DRKRYGGIKFGEMERDCLIAHGASANLHERLVTLSDSSQMHVCRNCKNVANVIERAVPGG 914 Query: 362 GKIRGPYCRFCDSSENIVKVNVPYGAKLLCQELFSMGI 475 KIRGPYCR C S ++IV+VNVPYGAKLLCQELFSMGI Sbjct: 915 RKIRGPYCRGCQSVDDIVRVNVPYGAKLLCQELFSMGI 952 >ref|XP_007011717.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao] gi|508782080|gb|EOY29336.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao] Length = 1184 Score = 283 bits (725), Expect = 1e-74 Identities = 130/158 (82%), Positives = 146/158 (92%) Frame = +2 Query: 2 RSGYSRWGSERLYNGHNGEMMRALIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVA 181 R+G+SRWG+ER+YNG GEM+R+LIF+GPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVA Sbjct: 1018 RAGFSRWGNERVYNGRTGEMVRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVA 1077 Query: 182 DRKRFGGIKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHICGKCKNITNVIQRAVPGG 361 DRKR+GGIKFGEMERDCL+AHGA+ANLHERL LSD SQMH+C CKN+ NVI+RAVPGG Sbjct: 1078 DRKRYGGIKFGEMERDCLIAHGASANLHERLVTLSDSSQMHVCRNCKNVANVIERAVPGG 1137 Query: 362 GKIRGPYCRFCDSSENIVKVNVPYGAKLLCQELFSMGI 475 KIRGPYCR C S ++IV+VNVPYGAKLLCQELFSMGI Sbjct: 1138 RKIRGPYCRGCQSVDDIVRVNVPYGAKLLCQELFSMGI 1175 >ref|XP_002447199.1| hypothetical protein SORBIDRAFT_06g030300 [Sorghum bicolor] gi|241938382|gb|EES11527.1| hypothetical protein SORBIDRAFT_06g030300 [Sorghum bicolor] Length = 1239 Score = 283 bits (724), Expect = 2e-74 Identities = 128/159 (80%), Positives = 145/159 (91%) Frame = +2 Query: 2 RSGYSRWGSERLYNGHNGEMMRALIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVA 181 ++GYSRWG+E + NG GE M++L+F+GPTFYQRLIHM+EDKVKFRNTGPVHPLTRQPVA Sbjct: 1073 KAGYSRWGAENVLNGRTGERMQSLVFMGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVA 1132 Query: 182 DRKRFGGIKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHICGKCKNITNVIQRAVPGG 361 DRKRFGG+KFGEMERDCLLAHG+AANLHERLFMLSDFSQMHIC C+ + NV+ R+VPGG Sbjct: 1133 DRKRFGGVKFGEMERDCLLAHGSAANLHERLFMLSDFSQMHICQTCERVANVVMRSVPGG 1192 Query: 362 GKIRGPYCRFCDSSENIVKVNVPYGAKLLCQELFSMGIC 478 KIRGPYC FC SSENIV++NVPYGAKLL QELFSMGIC Sbjct: 1193 KKIRGPYCGFCKSSENIVRINVPYGAKLLYQELFSMGIC 1231 >gb|ADB19859.1| mutant required to maintain repression 7-2/ RNA polymerase D second largest subunit 2-2 [Zea mays] Length = 1229 Score = 283 bits (723), Expect = 2e-74 Identities = 128/159 (80%), Positives = 145/159 (91%) Frame = +2 Query: 2 RSGYSRWGSERLYNGHNGEMMRALIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVA 181 R+GYSRWGSE + NG GE +++L+F+GPTFYQRLIHM+EDKVKFRNTGPVHPLTRQPVA Sbjct: 1063 RAGYSRWGSENVLNGRTGERVQSLVFMGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVA 1122 Query: 182 DRKRFGGIKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHICGKCKNITNVIQRAVPGG 361 DRKRFGG+KFGEMERDCLLAHG+AANLHERLF+LSDFSQMHIC C+ + NV+ R+VPGG Sbjct: 1123 DRKRFGGVKFGEMERDCLLAHGSAANLHERLFLLSDFSQMHICQTCERVANVVMRSVPGG 1182 Query: 362 GKIRGPYCRFCDSSENIVKVNVPYGAKLLCQELFSMGIC 478 KIRGPYC FC SSENIV++NVPYGAKLL QELFSMGIC Sbjct: 1183 KKIRGPYCGFCKSSENIVRINVPYGAKLLYQELFSMGIC 1221 >ref|NP_001177299.1| required to maintain repression7 [Zea mays] gi|283443696|gb|ADB19857.1| required to maintain repression 7/RNA polymerase D second largest subunit [Zea mays] gi|297185477|gb|ADI24118.1| RPD2/E2a [Zea mays] gi|414585188|tpg|DAA35759.1| TPA: putative DNA-directed RNA polymerase subunit family protein [Zea mays] Length = 1229 Score = 283 bits (723), Expect = 2e-74 Identities = 128/159 (80%), Positives = 145/159 (91%) Frame = +2 Query: 2 RSGYSRWGSERLYNGHNGEMMRALIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVA 181 R+GYSRWGSE + NG GE +++L+F+GPTFYQRLIHM+EDKVKFRNTGPVHPLTRQPVA Sbjct: 1063 RAGYSRWGSENVLNGRTGERVQSLVFMGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVA 1122 Query: 182 DRKRFGGIKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHICGKCKNITNVIQRAVPGG 361 DRKRFGG+KFGEMERDCLLAHG+AANLHERLF+LSDFSQMHIC C+ + NV+ R+VPGG Sbjct: 1123 DRKRFGGVKFGEMERDCLLAHGSAANLHERLFLLSDFSQMHICQTCERVANVVMRSVPGG 1182 Query: 362 GKIRGPYCRFCDSSENIVKVNVPYGAKLLCQELFSMGIC 478 KIRGPYC FC SSENIV++NVPYGAKLL QELFSMGIC Sbjct: 1183 KKIRGPYCGFCKSSENIVRINVPYGAKLLYQELFSMGIC 1221 >gb|AAY45706.1| RNA polymerase IV second largest subunit [Zea mays] Length = 1170 Score = 283 bits (723), Expect = 2e-74 Identities = 128/159 (80%), Positives = 145/159 (91%) Frame = +2 Query: 2 RSGYSRWGSERLYNGHNGEMMRALIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVA 181 R+GYSRWGSE + NG GE +++L+F+GPTFYQRLIHM+EDKVKFRNTGPVHPLTRQPVA Sbjct: 1004 RAGYSRWGSENVLNGRTGERVQSLVFMGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVA 1063 Query: 182 DRKRFGGIKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHICGKCKNITNVIQRAVPGG 361 DRKRFGG+KFGEMERDCLLAHG+AANLHERLF+LSDFSQMHIC C+ + NV+ R+VPGG Sbjct: 1064 DRKRFGGVKFGEMERDCLLAHGSAANLHERLFLLSDFSQMHICQTCERVANVVMRSVPGG 1123 Query: 362 GKIRGPYCRFCDSSENIVKVNVPYGAKLLCQELFSMGIC 478 KIRGPYC FC SSENIV++NVPYGAKLL QELFSMGIC Sbjct: 1124 KKIRGPYCGFCKSSENIVRINVPYGAKLLYQELFSMGIC 1162 >gb|AFW59623.1| putative DNA-directed RNA polymerase subunit family protein [Zea mays] Length = 2163 Score = 282 bits (722), Expect = 3e-74 Identities = 127/159 (79%), Positives = 145/159 (91%) Frame = +2 Query: 2 RSGYSRWGSERLYNGHNGEMMRALIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVA 181 ++GYSRWG+E + NG GE M++L+F+GPTFYQRLIHM+EDKVK+RNTGPVHPLTRQPVA Sbjct: 1997 KAGYSRWGAENVLNGRTGERMKSLVFMGPTFYQRLIHMSEDKVKYRNTGPVHPLTRQPVA 2056 Query: 182 DRKRFGGIKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHICGKCKNITNVIQRAVPGG 361 DRKRFGG+KFGEMERDCLLAHG+AANLHERLFMLSDFSQMHIC C+ + NV+ R+VPGG Sbjct: 2057 DRKRFGGVKFGEMERDCLLAHGSAANLHERLFMLSDFSQMHICQTCERVANVVMRSVPGG 2116 Query: 362 GKIRGPYCRFCDSSENIVKVNVPYGAKLLCQELFSMGIC 478 KIRGPYC FC SSENIV++NVPYGAKLL QELFSMGIC Sbjct: 2117 KKIRGPYCGFCKSSENIVRINVPYGAKLLYQELFSMGIC 2155 >gb|EEE61785.1| hypothetical protein OsJ_16357 [Oryza sativa Japonica Group] Length = 1185 Score = 282 bits (722), Expect = 3e-74 Identities = 130/159 (81%), Positives = 143/159 (89%) Frame = +2 Query: 2 RSGYSRWGSERLYNGHNGEMMRALIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVA 181 ++G+SRWG+E + NG GE M +LIF+GPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVA Sbjct: 1019 KAGFSRWGAESVLNGRTGERMHSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVA 1078 Query: 182 DRKRFGGIKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHICGKCKNITNVIQRAVPGG 361 DRKRFGG+KFGEMERDCLLAHGAAANLHERLFMLSDFSQMH+C C+ + NVI R VPGG Sbjct: 1079 DRKRFGGVKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHVCQTCERVANVIMRPVPGG 1138 Query: 362 GKIRGPYCRFCDSSENIVKVNVPYGAKLLCQELFSMGIC 478 KIRGPYC FC SSENIV++NVPYGAKLL QELFSMGIC Sbjct: 1139 KKIRGPYCGFCRSSENIVRINVPYGAKLLYQELFSMGIC 1177