BLASTX nr result
ID: Akebia26_contig00020651
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia26_contig00020651
(523 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002515428.1| DNA-directed RNA polymerase subunit, putativ... 293 2e-77
emb|CBI21137.3| unnamed protein product [Vitis vinifera] 289 2e-76
ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerase D sub... 289 2e-76
ref|XP_006364477.1| PREDICTED: DNA-directed RNA polymerases IV a... 288 7e-76
gb|AAY68198.1| RNA polymerase IV second largest subunit [Rhodode... 288 7e-76
ref|XP_004145500.1| PREDICTED: DNA-directed RNA polymerase D sub... 287 9e-76
ref|XP_004245914.1| PREDICTED: DNA-directed RNA polymerase D sub... 286 2e-75
gb|ABG29322.1| DNA-directed RNA polymerase II 135 kDa polypeptid... 286 2e-75
ref|XP_006442883.1| hypothetical protein CICLE_v10018562mg [Citr... 286 2e-75
ref|XP_006351506.1| PREDICTED: DNA-directed RNA polymerases IV a... 285 5e-75
ref|XP_004236361.1| PREDICTED: DNA-directed RNA polymerase D sub... 285 5e-75
ref|XP_002324332.2| DNA-directed RNA polymerase family protein [... 285 6e-75
ref|XP_007011718.1| DNA-directed RNA polymerase isoform 2 [Theob... 283 1e-74
ref|XP_007011717.1| DNA-directed RNA polymerase isoform 1 [Theob... 283 1e-74
ref|XP_002447199.1| hypothetical protein SORBIDRAFT_06g030300 [S... 283 2e-74
gb|ADB19859.1| mutant required to maintain repression 7-2/ RNA p... 283 2e-74
ref|NP_001177299.1| required to maintain repression7 [Zea mays] ... 283 2e-74
gb|AAY45706.1| RNA polymerase IV second largest subunit [Zea mays] 283 2e-74
gb|AFW59623.1| putative DNA-directed RNA polymerase subunit fami... 282 3e-74
gb|EEE61785.1| hypothetical protein OsJ_16357 [Oryza sativa Japo... 282 3e-74
>ref|XP_002515428.1| DNA-directed RNA polymerase subunit, putative [Ricinus communis]
gi|223545372|gb|EEF46877.1| DNA-directed RNA polymerase
subunit, putative [Ricinus communis]
Length = 1203
Score = 293 bits (750), Expect = 2e-77
Identities = 136/158 (86%), Positives = 148/158 (93%)
Frame = +2
Query: 2 RSGYSRWGSERLYNGHNGEMMRALIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVA 181
R+G+SRWG+ER+YNG GEM+R+LIF+GPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVA
Sbjct: 1037 RAGFSRWGNERVYNGRTGEMVRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVA 1096
Query: 182 DRKRFGGIKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHICGKCKNITNVIQRAVPGG 361
DRKRFGGIKFGEMERDCL+AHGA+ANLHERLF LSD SQMHIC KCKN+ NVIQRAVPGG
Sbjct: 1097 DRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHICQKCKNVANVIQRAVPGG 1156
Query: 362 GKIRGPYCRFCDSSENIVKVNVPYGAKLLCQELFSMGI 475
KIRGPYCR C+S + IVKVNVPYGAKLLCQELFSMGI
Sbjct: 1157 RKIRGPYCRVCESVDEIVKVNVPYGAKLLCQELFSMGI 1194
>emb|CBI21137.3| unnamed protein product [Vitis vinifera]
Length = 1220
Score = 289 bits (740), Expect = 2e-76
Identities = 133/158 (84%), Positives = 148/158 (93%)
Frame = +2
Query: 2 RSGYSRWGSERLYNGHNGEMMRALIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVA 181
R+G+SRWG ER+YNG GEM+R+LIF+GPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPV+
Sbjct: 1054 RAGFSRWGHERVYNGRTGEMLRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVS 1113
Query: 182 DRKRFGGIKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHICGKCKNITNVIQRAVPGG 361
DRKRFGGIKFGEMERDCL+AHGAAANLHERLF LSD + MHIC +CKNI+NVIQR+V GG
Sbjct: 1114 DRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSAYMHICRRCKNISNVIQRSVAGG 1173
Query: 362 GKIRGPYCRFCDSSENIVKVNVPYGAKLLCQELFSMGI 475
K+RGPYCR+C+SSE IVKVNVPYGAKLLCQELFSMGI
Sbjct: 1174 RKVRGPYCRYCESSEEIVKVNVPYGAKLLCQELFSMGI 1211
>ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Vitis
vinifera]
Length = 1198
Score = 289 bits (740), Expect = 2e-76
Identities = 133/158 (84%), Positives = 148/158 (93%)
Frame = +2
Query: 2 RSGYSRWGSERLYNGHNGEMMRALIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVA 181
R+G+SRWG ER+YNG GEM+R+LIF+GPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPV+
Sbjct: 1032 RAGFSRWGHERVYNGRTGEMLRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVS 1091
Query: 182 DRKRFGGIKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHICGKCKNITNVIQRAVPGG 361
DRKRFGGIKFGEMERDCL+AHGAAANLHERLF LSD + MHIC +CKNI+NVIQR+V GG
Sbjct: 1092 DRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSAYMHICRRCKNISNVIQRSVAGG 1151
Query: 362 GKIRGPYCRFCDSSENIVKVNVPYGAKLLCQELFSMGI 475
K+RGPYCR+C+SSE IVKVNVPYGAKLLCQELFSMGI
Sbjct: 1152 RKVRGPYCRYCESSEEIVKVNVPYGAKLLCQELFSMGI 1189
>ref|XP_006364477.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
[Solanum tuberosum]
Length = 1219
Score = 288 bits (736), Expect = 7e-76
Identities = 135/156 (86%), Positives = 147/156 (94%)
Frame = +2
Query: 8 GYSRWGSERLYNGHNGEMMRALIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADR 187
G+SRWGSER+YNG GEM+ +LIF+GPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADR
Sbjct: 1056 GFSRWGSERVYNGRTGEMVHSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADR 1115
Query: 188 KRFGGIKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHICGKCKNITNVIQRAVPGGGK 367
KRFGGIKFGEMERDCL+AHGAAANLHERLF LSD SQMHICGKCKN+ NVIQR+ P GGK
Sbjct: 1116 KRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICGKCKNMANVIQRSAP-GGK 1174
Query: 368 IRGPYCRFCDSSENIVKVNVPYGAKLLCQELFSMGI 475
IRGP+CRFC+S E+IVKV+VPYGAKLLCQELFSMGI
Sbjct: 1175 IRGPFCRFCESVEDIVKVDVPYGAKLLCQELFSMGI 1210
>gb|AAY68198.1| RNA polymerase IV second largest subunit [Rhododendron macrophyllum]
Length = 1019
Score = 288 bits (736), Expect = 7e-76
Identities = 134/158 (84%), Positives = 145/158 (91%)
Frame = +2
Query: 2 RSGYSRWGSERLYNGHNGEMMRALIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVA 181
R+G+SRWGSER+YNG GEM+ +L+F+GPTFYQRL HM+EDKVKFRNTGPVHPLTRQPVA
Sbjct: 853 RAGFSRWGSERVYNGRTGEMIHSLVFMGPTFYQRLTHMSEDKVKFRNTGPVHPLTRQPVA 912
Query: 182 DRKRFGGIKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHICGKCKNITNVIQRAVPGG 361
DRKRFGGIKFGEMERDCL+AHGAAANLHERLF LSD SQMHIC KC NI NVIQRAVPGG
Sbjct: 913 DRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICRKCNNIANVIQRAVPGG 972
Query: 362 GKIRGPYCRFCDSSENIVKVNVPYGAKLLCQELFSMGI 475
KIRGPYCRFC+S E IV+VNVPYGAKLL QELFSMGI
Sbjct: 973 RKIRGPYCRFCESVEEIVRVNVPYGAKLLAQELFSMGI 1010
>ref|XP_004145500.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Cucumis
sativus]
Length = 1197
Score = 287 bits (735), Expect = 9e-76
Identities = 132/158 (83%), Positives = 148/158 (93%)
Frame = +2
Query: 2 RSGYSRWGSERLYNGHNGEMMRALIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVA 181
R+G+SRWGSER+YNG GEMMR+LIF+GPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVA
Sbjct: 1031 RAGFSRWGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVA 1090
Query: 182 DRKRFGGIKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHICGKCKNITNVIQRAVPGG 361
DRKRFGGIKFGEMERDCL+AHGA+ANLHERLF LSD SQMH+C KCKN+ +VIQR+V GG
Sbjct: 1091 DRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVASVIQRSVAGG 1150
Query: 362 GKIRGPYCRFCDSSENIVKVNVPYGAKLLCQELFSMGI 475
K+RGPYCR C+S ++IV+VNVPYGAKLLCQELFSMGI
Sbjct: 1151 RKMRGPYCRVCESFDDIVRVNVPYGAKLLCQELFSMGI 1188
>ref|XP_004245914.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Solanum
lycopersicum]
Length = 1219
Score = 286 bits (733), Expect = 2e-75
Identities = 134/156 (85%), Positives = 146/156 (93%)
Frame = +2
Query: 8 GYSRWGSERLYNGHNGEMMRALIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADR 187
G+SRWG+ER+YNG GEM+ +LIF+GPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADR
Sbjct: 1056 GFSRWGNERVYNGRTGEMVHSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADR 1115
Query: 188 KRFGGIKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHICGKCKNITNVIQRAVPGGGK 367
KRFGGIKFGEMERDCL+AHGAAANLHERLF LSD SQMHICGKCKN+ NVIQR VP GGK
Sbjct: 1116 KRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICGKCKNMANVIQRPVP-GGK 1174
Query: 368 IRGPYCRFCDSSENIVKVNVPYGAKLLCQELFSMGI 475
+RGP+CRFC+S E+IVKV VPYGAKLLCQELFSMGI
Sbjct: 1175 VRGPFCRFCESVEDIVKVGVPYGAKLLCQELFSMGI 1210
>gb|ABG29322.1| DNA-directed RNA polymerase II 135 kDa polypeptide, putative
[Solanum bulbocastanum]
Length = 304
Score = 286 bits (733), Expect = 2e-75
Identities = 134/156 (85%), Positives = 147/156 (94%)
Frame = +2
Query: 8 GYSRWGSERLYNGHNGEMMRALIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADR 187
G+SRWG+ER+YNG GEM+ +LIF+GPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADR
Sbjct: 141 GFSRWGNERVYNGRTGEMVHSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADR 200
Query: 188 KRFGGIKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHICGKCKNITNVIQRAVPGGGK 367
KRFGGIKFGEMERDCL+AHGAAANLHERLF LSD SQMHICGKCKN+ NVIQR+ P GGK
Sbjct: 201 KRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICGKCKNMANVIQRSAP-GGK 259
Query: 368 IRGPYCRFCDSSENIVKVNVPYGAKLLCQELFSMGI 475
IRGP+CRFC+S E+IVKV+VPYGAKLLCQELFSMGI
Sbjct: 260 IRGPFCRFCESVEDIVKVDVPYGAKLLCQELFSMGI 295
>ref|XP_006442883.1| hypothetical protein CICLE_v10018562mg [Citrus clementina]
gi|568850178|ref|XP_006478802.1| PREDICTED: DNA-directed
RNA polymerases IV and V subunit 2-like [Citrus sinensis]
gi|557545145|gb|ESR56123.1| hypothetical protein
CICLE_v10018562mg [Citrus clementina]
Length = 1198
Score = 286 bits (732), Expect = 2e-75
Identities = 132/158 (83%), Positives = 145/158 (91%)
Frame = +2
Query: 2 RSGYSRWGSERLYNGHNGEMMRALIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVA 181
R+G+S+WG+ERLY+G GEM+R+LIFIGPTFYQRLIHM+EDKVKFRNTGPVHPLTRQPVA
Sbjct: 1032 RAGFSKWGTERLYDGRTGEMVRSLIFIGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVA 1091
Query: 182 DRKRFGGIKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHICGKCKNITNVIQRAVPGG 361
DRKRFGGIKFGEMERDCL+AHGAAANLHERLF LSD QMHIC KCKN+ NVIQR V GG
Sbjct: 1092 DRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSYQMHICRKCKNVANVIQRVVGGG 1151
Query: 362 GKIRGPYCRFCDSSENIVKVNVPYGAKLLCQELFSMGI 475
K+RGPYCR CDS ++IVK NVPYGAKLLCQELFSMGI
Sbjct: 1152 RKVRGPYCRICDSGDDIVKANVPYGAKLLCQELFSMGI 1189
>ref|XP_006351506.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
[Solanum tuberosum]
Length = 1217
Score = 285 bits (729), Expect = 5e-75
Identities = 133/156 (85%), Positives = 146/156 (93%)
Frame = +2
Query: 8 GYSRWGSERLYNGHNGEMMRALIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADR 187
G++RWG+ER+YNG GEM+ +LIF+GPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADR
Sbjct: 1054 GFTRWGNERVYNGRTGEMVHSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADR 1113
Query: 188 KRFGGIKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHICGKCKNITNVIQRAVPGGGK 367
KRFGGIKFGEMERDCL+AHGAAANLHERLF LSD SQMHICGKCKN+ NVIQR V GGK
Sbjct: 1114 KRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICGKCKNMANVIQRTVQ-GGK 1172
Query: 368 IRGPYCRFCDSSENIVKVNVPYGAKLLCQELFSMGI 475
+RGP+CRFC+S E+IVKVNVPYGAKLLCQELFSMGI
Sbjct: 1173 VRGPFCRFCESVEDIVKVNVPYGAKLLCQELFSMGI 1208
>ref|XP_004236361.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a [Solanum
lycopersicum]
Length = 1217
Score = 285 bits (729), Expect = 5e-75
Identities = 133/156 (85%), Positives = 146/156 (93%)
Frame = +2
Query: 8 GYSRWGSERLYNGHNGEMMRALIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADR 187
G++RWG+ER+YNG GEM+ +LIF+GPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADR
Sbjct: 1054 GFTRWGNERVYNGRTGEMVHSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADR 1113
Query: 188 KRFGGIKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHICGKCKNITNVIQRAVPGGGK 367
KRFGGIKFGEMERDCL+AHGAAANLHERLF LSD SQMHICGKCKN+ NVIQR V GGK
Sbjct: 1114 KRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICGKCKNMANVIQRTVQ-GGK 1172
Query: 368 IRGPYCRFCDSSENIVKVNVPYGAKLLCQELFSMGI 475
+RGP+CRFC+S E+IVKVNVPYGAKLLCQELFSMGI
Sbjct: 1173 VRGPFCRFCESVEDIVKVNVPYGAKLLCQELFSMGI 1208
>ref|XP_002324332.2| DNA-directed RNA polymerase family protein [Populus trichocarpa]
gi|550317882|gb|EEF02897.2| DNA-directed RNA polymerase
family protein [Populus trichocarpa]
Length = 1181
Score = 285 bits (728), Expect = 6e-75
Identities = 130/158 (82%), Positives = 147/158 (93%)
Frame = +2
Query: 2 RSGYSRWGSERLYNGHNGEMMRALIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVA 181
R+ +SRWG+ER+YNG GEM+R+LIF+GPTFYQRL+HMAEDKVKFRNTGPVHPLTRQPVA
Sbjct: 1015 RAKFSRWGNERVYNGRTGEMVRSLIFMGPTFYQRLVHMAEDKVKFRNTGPVHPLTRQPVA 1074
Query: 182 DRKRFGGIKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHICGKCKNITNVIQRAVPGG 361
DRKRFGGIKFGEMERDCL+AHGA+ANLHERLF LSD S+MHIC KCKN+ NVIQR VPGG
Sbjct: 1075 DRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSEMHICQKCKNVANVIQRGVPGG 1134
Query: 362 GKIRGPYCRFCDSSENIVKVNVPYGAKLLCQELFSMGI 475
KIRGPYCR C+S +++VKV+VPYGAKLLCQELFSMGI
Sbjct: 1135 RKIRGPYCRVCESVDDLVKVSVPYGAKLLCQELFSMGI 1172
>ref|XP_007011718.1| DNA-directed RNA polymerase isoform 2 [Theobroma cacao]
gi|508782081|gb|EOY29337.1| DNA-directed RNA polymerase
isoform 2 [Theobroma cacao]
Length = 961
Score = 283 bits (725), Expect = 1e-74
Identities = 130/158 (82%), Positives = 146/158 (92%)
Frame = +2
Query: 2 RSGYSRWGSERLYNGHNGEMMRALIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVA 181
R+G+SRWG+ER+YNG GEM+R+LIF+GPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVA
Sbjct: 795 RAGFSRWGNERVYNGRTGEMVRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVA 854
Query: 182 DRKRFGGIKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHICGKCKNITNVIQRAVPGG 361
DRKR+GGIKFGEMERDCL+AHGA+ANLHERL LSD SQMH+C CKN+ NVI+RAVPGG
Sbjct: 855 DRKRYGGIKFGEMERDCLIAHGASANLHERLVTLSDSSQMHVCRNCKNVANVIERAVPGG 914
Query: 362 GKIRGPYCRFCDSSENIVKVNVPYGAKLLCQELFSMGI 475
KIRGPYCR C S ++IV+VNVPYGAKLLCQELFSMGI
Sbjct: 915 RKIRGPYCRGCQSVDDIVRVNVPYGAKLLCQELFSMGI 952
>ref|XP_007011717.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
gi|508782080|gb|EOY29336.1| DNA-directed RNA polymerase
isoform 1 [Theobroma cacao]
Length = 1184
Score = 283 bits (725), Expect = 1e-74
Identities = 130/158 (82%), Positives = 146/158 (92%)
Frame = +2
Query: 2 RSGYSRWGSERLYNGHNGEMMRALIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVA 181
R+G+SRWG+ER+YNG GEM+R+LIF+GPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVA
Sbjct: 1018 RAGFSRWGNERVYNGRTGEMVRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVA 1077
Query: 182 DRKRFGGIKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHICGKCKNITNVIQRAVPGG 361
DRKR+GGIKFGEMERDCL+AHGA+ANLHERL LSD SQMH+C CKN+ NVI+RAVPGG
Sbjct: 1078 DRKRYGGIKFGEMERDCLIAHGASANLHERLVTLSDSSQMHVCRNCKNVANVIERAVPGG 1137
Query: 362 GKIRGPYCRFCDSSENIVKVNVPYGAKLLCQELFSMGI 475
KIRGPYCR C S ++IV+VNVPYGAKLLCQELFSMGI
Sbjct: 1138 RKIRGPYCRGCQSVDDIVRVNVPYGAKLLCQELFSMGI 1175
>ref|XP_002447199.1| hypothetical protein SORBIDRAFT_06g030300 [Sorghum bicolor]
gi|241938382|gb|EES11527.1| hypothetical protein
SORBIDRAFT_06g030300 [Sorghum bicolor]
Length = 1239
Score = 283 bits (724), Expect = 2e-74
Identities = 128/159 (80%), Positives = 145/159 (91%)
Frame = +2
Query: 2 RSGYSRWGSERLYNGHNGEMMRALIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVA 181
++GYSRWG+E + NG GE M++L+F+GPTFYQRLIHM+EDKVKFRNTGPVHPLTRQPVA
Sbjct: 1073 KAGYSRWGAENVLNGRTGERMQSLVFMGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVA 1132
Query: 182 DRKRFGGIKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHICGKCKNITNVIQRAVPGG 361
DRKRFGG+KFGEMERDCLLAHG+AANLHERLFMLSDFSQMHIC C+ + NV+ R+VPGG
Sbjct: 1133 DRKRFGGVKFGEMERDCLLAHGSAANLHERLFMLSDFSQMHICQTCERVANVVMRSVPGG 1192
Query: 362 GKIRGPYCRFCDSSENIVKVNVPYGAKLLCQELFSMGIC 478
KIRGPYC FC SSENIV++NVPYGAKLL QELFSMGIC
Sbjct: 1193 KKIRGPYCGFCKSSENIVRINVPYGAKLLYQELFSMGIC 1231
>gb|ADB19859.1| mutant required to maintain repression 7-2/ RNA polymerase D second
largest subunit 2-2 [Zea mays]
Length = 1229
Score = 283 bits (723), Expect = 2e-74
Identities = 128/159 (80%), Positives = 145/159 (91%)
Frame = +2
Query: 2 RSGYSRWGSERLYNGHNGEMMRALIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVA 181
R+GYSRWGSE + NG GE +++L+F+GPTFYQRLIHM+EDKVKFRNTGPVHPLTRQPVA
Sbjct: 1063 RAGYSRWGSENVLNGRTGERVQSLVFMGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVA 1122
Query: 182 DRKRFGGIKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHICGKCKNITNVIQRAVPGG 361
DRKRFGG+KFGEMERDCLLAHG+AANLHERLF+LSDFSQMHIC C+ + NV+ R+VPGG
Sbjct: 1123 DRKRFGGVKFGEMERDCLLAHGSAANLHERLFLLSDFSQMHICQTCERVANVVMRSVPGG 1182
Query: 362 GKIRGPYCRFCDSSENIVKVNVPYGAKLLCQELFSMGIC 478
KIRGPYC FC SSENIV++NVPYGAKLL QELFSMGIC
Sbjct: 1183 KKIRGPYCGFCKSSENIVRINVPYGAKLLYQELFSMGIC 1221
>ref|NP_001177299.1| required to maintain repression7 [Zea mays]
gi|283443696|gb|ADB19857.1| required to maintain
repression 7/RNA polymerase D second largest subunit [Zea
mays] gi|297185477|gb|ADI24118.1| RPD2/E2a [Zea mays]
gi|414585188|tpg|DAA35759.1| TPA: putative DNA-directed
RNA polymerase subunit family protein [Zea mays]
Length = 1229
Score = 283 bits (723), Expect = 2e-74
Identities = 128/159 (80%), Positives = 145/159 (91%)
Frame = +2
Query: 2 RSGYSRWGSERLYNGHNGEMMRALIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVA 181
R+GYSRWGSE + NG GE +++L+F+GPTFYQRLIHM+EDKVKFRNTGPVHPLTRQPVA
Sbjct: 1063 RAGYSRWGSENVLNGRTGERVQSLVFMGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVA 1122
Query: 182 DRKRFGGIKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHICGKCKNITNVIQRAVPGG 361
DRKRFGG+KFGEMERDCLLAHG+AANLHERLF+LSDFSQMHIC C+ + NV+ R+VPGG
Sbjct: 1123 DRKRFGGVKFGEMERDCLLAHGSAANLHERLFLLSDFSQMHICQTCERVANVVMRSVPGG 1182
Query: 362 GKIRGPYCRFCDSSENIVKVNVPYGAKLLCQELFSMGIC 478
KIRGPYC FC SSENIV++NVPYGAKLL QELFSMGIC
Sbjct: 1183 KKIRGPYCGFCKSSENIVRINVPYGAKLLYQELFSMGIC 1221
>gb|AAY45706.1| RNA polymerase IV second largest subunit [Zea mays]
Length = 1170
Score = 283 bits (723), Expect = 2e-74
Identities = 128/159 (80%), Positives = 145/159 (91%)
Frame = +2
Query: 2 RSGYSRWGSERLYNGHNGEMMRALIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVA 181
R+GYSRWGSE + NG GE +++L+F+GPTFYQRLIHM+EDKVKFRNTGPVHPLTRQPVA
Sbjct: 1004 RAGYSRWGSENVLNGRTGERVQSLVFMGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVA 1063
Query: 182 DRKRFGGIKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHICGKCKNITNVIQRAVPGG 361
DRKRFGG+KFGEMERDCLLAHG+AANLHERLF+LSDFSQMHIC C+ + NV+ R+VPGG
Sbjct: 1064 DRKRFGGVKFGEMERDCLLAHGSAANLHERLFLLSDFSQMHICQTCERVANVVMRSVPGG 1123
Query: 362 GKIRGPYCRFCDSSENIVKVNVPYGAKLLCQELFSMGIC 478
KIRGPYC FC SSENIV++NVPYGAKLL QELFSMGIC
Sbjct: 1124 KKIRGPYCGFCKSSENIVRINVPYGAKLLYQELFSMGIC 1162
>gb|AFW59623.1| putative DNA-directed RNA polymerase subunit family protein [Zea
mays]
Length = 2163
Score = 282 bits (722), Expect = 3e-74
Identities = 127/159 (79%), Positives = 145/159 (91%)
Frame = +2
Query: 2 RSGYSRWGSERLYNGHNGEMMRALIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVA 181
++GYSRWG+E + NG GE M++L+F+GPTFYQRLIHM+EDKVK+RNTGPVHPLTRQPVA
Sbjct: 1997 KAGYSRWGAENVLNGRTGERMKSLVFMGPTFYQRLIHMSEDKVKYRNTGPVHPLTRQPVA 2056
Query: 182 DRKRFGGIKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHICGKCKNITNVIQRAVPGG 361
DRKRFGG+KFGEMERDCLLAHG+AANLHERLFMLSDFSQMHIC C+ + NV+ R+VPGG
Sbjct: 2057 DRKRFGGVKFGEMERDCLLAHGSAANLHERLFMLSDFSQMHICQTCERVANVVMRSVPGG 2116
Query: 362 GKIRGPYCRFCDSSENIVKVNVPYGAKLLCQELFSMGIC 478
KIRGPYC FC SSENIV++NVPYGAKLL QELFSMGIC
Sbjct: 2117 KKIRGPYCGFCKSSENIVRINVPYGAKLLYQELFSMGIC 2155
>gb|EEE61785.1| hypothetical protein OsJ_16357 [Oryza sativa Japonica Group]
Length = 1185
Score = 282 bits (722), Expect = 3e-74
Identities = 130/159 (81%), Positives = 143/159 (89%)
Frame = +2
Query: 2 RSGYSRWGSERLYNGHNGEMMRALIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVA 181
++G+SRWG+E + NG GE M +LIF+GPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVA
Sbjct: 1019 KAGFSRWGAESVLNGRTGERMHSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVA 1078
Query: 182 DRKRFGGIKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHICGKCKNITNVIQRAVPGG 361
DRKRFGG+KFGEMERDCLLAHGAAANLHERLFMLSDFSQMH+C C+ + NVI R VPGG
Sbjct: 1079 DRKRFGGVKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHVCQTCERVANVIMRPVPGG 1138
Query: 362 GKIRGPYCRFCDSSENIVKVNVPYGAKLLCQELFSMGIC 478
KIRGPYC FC SSENIV++NVPYGAKLL QELFSMGIC
Sbjct: 1139 KKIRGPYCGFCRSSENIVRINVPYGAKLLYQELFSMGIC 1177