BLASTX nr result

ID: Akebia26_contig00020651 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia26_contig00020651
         (523 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515428.1| DNA-directed RNA polymerase subunit, putativ...   293   2e-77
emb|CBI21137.3| unnamed protein product [Vitis vinifera]              289   2e-76
ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerase D sub...   289   2e-76
ref|XP_006364477.1| PREDICTED: DNA-directed RNA polymerases IV a...   288   7e-76
gb|AAY68198.1| RNA polymerase IV second largest subunit [Rhodode...   288   7e-76
ref|XP_004145500.1| PREDICTED: DNA-directed RNA polymerase D sub...   287   9e-76
ref|XP_004245914.1| PREDICTED: DNA-directed RNA polymerase D sub...   286   2e-75
gb|ABG29322.1| DNA-directed RNA polymerase II 135 kDa polypeptid...   286   2e-75
ref|XP_006442883.1| hypothetical protein CICLE_v10018562mg [Citr...   286   2e-75
ref|XP_006351506.1| PREDICTED: DNA-directed RNA polymerases IV a...   285   5e-75
ref|XP_004236361.1| PREDICTED: DNA-directed RNA polymerase D sub...   285   5e-75
ref|XP_002324332.2| DNA-directed RNA polymerase family protein [...   285   6e-75
ref|XP_007011718.1| DNA-directed RNA polymerase isoform 2 [Theob...   283   1e-74
ref|XP_007011717.1| DNA-directed RNA polymerase isoform 1 [Theob...   283   1e-74
ref|XP_002447199.1| hypothetical protein SORBIDRAFT_06g030300 [S...   283   2e-74
gb|ADB19859.1| mutant required to maintain repression 7-2/ RNA p...   283   2e-74
ref|NP_001177299.1| required to maintain repression7 [Zea mays] ...   283   2e-74
gb|AAY45706.1| RNA polymerase IV second largest subunit [Zea mays]    283   2e-74
gb|AFW59623.1| putative DNA-directed RNA polymerase subunit fami...   282   3e-74
gb|EEE61785.1| hypothetical protein OsJ_16357 [Oryza sativa Japo...   282   3e-74

>ref|XP_002515428.1| DNA-directed RNA polymerase subunit, putative [Ricinus communis]
            gi|223545372|gb|EEF46877.1| DNA-directed RNA polymerase
            subunit, putative [Ricinus communis]
          Length = 1203

 Score =  293 bits (750), Expect = 2e-77
 Identities = 136/158 (86%), Positives = 148/158 (93%)
 Frame = +2

Query: 2    RSGYSRWGSERLYNGHNGEMMRALIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVA 181
            R+G+SRWG+ER+YNG  GEM+R+LIF+GPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVA
Sbjct: 1037 RAGFSRWGNERVYNGRTGEMVRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVA 1096

Query: 182  DRKRFGGIKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHICGKCKNITNVIQRAVPGG 361
            DRKRFGGIKFGEMERDCL+AHGA+ANLHERLF LSD SQMHIC KCKN+ NVIQRAVPGG
Sbjct: 1097 DRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHICQKCKNVANVIQRAVPGG 1156

Query: 362  GKIRGPYCRFCDSSENIVKVNVPYGAKLLCQELFSMGI 475
             KIRGPYCR C+S + IVKVNVPYGAKLLCQELFSMGI
Sbjct: 1157 RKIRGPYCRVCESVDEIVKVNVPYGAKLLCQELFSMGI 1194


>emb|CBI21137.3| unnamed protein product [Vitis vinifera]
          Length = 1220

 Score =  289 bits (740), Expect = 2e-76
 Identities = 133/158 (84%), Positives = 148/158 (93%)
 Frame = +2

Query: 2    RSGYSRWGSERLYNGHNGEMMRALIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVA 181
            R+G+SRWG ER+YNG  GEM+R+LIF+GPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPV+
Sbjct: 1054 RAGFSRWGHERVYNGRTGEMLRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVS 1113

Query: 182  DRKRFGGIKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHICGKCKNITNVIQRAVPGG 361
            DRKRFGGIKFGEMERDCL+AHGAAANLHERLF LSD + MHIC +CKNI+NVIQR+V GG
Sbjct: 1114 DRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSAYMHICRRCKNISNVIQRSVAGG 1173

Query: 362  GKIRGPYCRFCDSSENIVKVNVPYGAKLLCQELFSMGI 475
             K+RGPYCR+C+SSE IVKVNVPYGAKLLCQELFSMGI
Sbjct: 1174 RKVRGPYCRYCESSEEIVKVNVPYGAKLLCQELFSMGI 1211


>ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Vitis
            vinifera]
          Length = 1198

 Score =  289 bits (740), Expect = 2e-76
 Identities = 133/158 (84%), Positives = 148/158 (93%)
 Frame = +2

Query: 2    RSGYSRWGSERLYNGHNGEMMRALIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVA 181
            R+G+SRWG ER+YNG  GEM+R+LIF+GPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPV+
Sbjct: 1032 RAGFSRWGHERVYNGRTGEMLRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVS 1091

Query: 182  DRKRFGGIKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHICGKCKNITNVIQRAVPGG 361
            DRKRFGGIKFGEMERDCL+AHGAAANLHERLF LSD + MHIC +CKNI+NVIQR+V GG
Sbjct: 1092 DRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSAYMHICRRCKNISNVIQRSVAGG 1151

Query: 362  GKIRGPYCRFCDSSENIVKVNVPYGAKLLCQELFSMGI 475
             K+RGPYCR+C+SSE IVKVNVPYGAKLLCQELFSMGI
Sbjct: 1152 RKVRGPYCRYCESSEEIVKVNVPYGAKLLCQELFSMGI 1189


>ref|XP_006364477.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Solanum tuberosum]
          Length = 1219

 Score =  288 bits (736), Expect = 7e-76
 Identities = 135/156 (86%), Positives = 147/156 (94%)
 Frame = +2

Query: 8    GYSRWGSERLYNGHNGEMMRALIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADR 187
            G+SRWGSER+YNG  GEM+ +LIF+GPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADR
Sbjct: 1056 GFSRWGSERVYNGRTGEMVHSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADR 1115

Query: 188  KRFGGIKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHICGKCKNITNVIQRAVPGGGK 367
            KRFGGIKFGEMERDCL+AHGAAANLHERLF LSD SQMHICGKCKN+ NVIQR+ P GGK
Sbjct: 1116 KRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICGKCKNMANVIQRSAP-GGK 1174

Query: 368  IRGPYCRFCDSSENIVKVNVPYGAKLLCQELFSMGI 475
            IRGP+CRFC+S E+IVKV+VPYGAKLLCQELFSMGI
Sbjct: 1175 IRGPFCRFCESVEDIVKVDVPYGAKLLCQELFSMGI 1210


>gb|AAY68198.1| RNA polymerase IV second largest subunit [Rhododendron macrophyllum]
          Length = 1019

 Score =  288 bits (736), Expect = 7e-76
 Identities = 134/158 (84%), Positives = 145/158 (91%)
 Frame = +2

Query: 2    RSGYSRWGSERLYNGHNGEMMRALIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVA 181
            R+G+SRWGSER+YNG  GEM+ +L+F+GPTFYQRL HM+EDKVKFRNTGPVHPLTRQPVA
Sbjct: 853  RAGFSRWGSERVYNGRTGEMIHSLVFMGPTFYQRLTHMSEDKVKFRNTGPVHPLTRQPVA 912

Query: 182  DRKRFGGIKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHICGKCKNITNVIQRAVPGG 361
            DRKRFGGIKFGEMERDCL+AHGAAANLHERLF LSD SQMHIC KC NI NVIQRAVPGG
Sbjct: 913  DRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICRKCNNIANVIQRAVPGG 972

Query: 362  GKIRGPYCRFCDSSENIVKVNVPYGAKLLCQELFSMGI 475
             KIRGPYCRFC+S E IV+VNVPYGAKLL QELFSMGI
Sbjct: 973  RKIRGPYCRFCESVEEIVRVNVPYGAKLLAQELFSMGI 1010


>ref|XP_004145500.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Cucumis
            sativus]
          Length = 1197

 Score =  287 bits (735), Expect = 9e-76
 Identities = 132/158 (83%), Positives = 148/158 (93%)
 Frame = +2

Query: 2    RSGYSRWGSERLYNGHNGEMMRALIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVA 181
            R+G+SRWGSER+YNG  GEMMR+LIF+GPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVA
Sbjct: 1031 RAGFSRWGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVA 1090

Query: 182  DRKRFGGIKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHICGKCKNITNVIQRAVPGG 361
            DRKRFGGIKFGEMERDCL+AHGA+ANLHERLF LSD SQMH+C KCKN+ +VIQR+V GG
Sbjct: 1091 DRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVASVIQRSVAGG 1150

Query: 362  GKIRGPYCRFCDSSENIVKVNVPYGAKLLCQELFSMGI 475
             K+RGPYCR C+S ++IV+VNVPYGAKLLCQELFSMGI
Sbjct: 1151 RKMRGPYCRVCESFDDIVRVNVPYGAKLLCQELFSMGI 1188


>ref|XP_004245914.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Solanum
            lycopersicum]
          Length = 1219

 Score =  286 bits (733), Expect = 2e-75
 Identities = 134/156 (85%), Positives = 146/156 (93%)
 Frame = +2

Query: 8    GYSRWGSERLYNGHNGEMMRALIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADR 187
            G+SRWG+ER+YNG  GEM+ +LIF+GPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADR
Sbjct: 1056 GFSRWGNERVYNGRTGEMVHSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADR 1115

Query: 188  KRFGGIKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHICGKCKNITNVIQRAVPGGGK 367
            KRFGGIKFGEMERDCL+AHGAAANLHERLF LSD SQMHICGKCKN+ NVIQR VP GGK
Sbjct: 1116 KRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICGKCKNMANVIQRPVP-GGK 1174

Query: 368  IRGPYCRFCDSSENIVKVNVPYGAKLLCQELFSMGI 475
            +RGP+CRFC+S E+IVKV VPYGAKLLCQELFSMGI
Sbjct: 1175 VRGPFCRFCESVEDIVKVGVPYGAKLLCQELFSMGI 1210


>gb|ABG29322.1| DNA-directed RNA polymerase II 135 kDa polypeptide, putative
           [Solanum bulbocastanum]
          Length = 304

 Score =  286 bits (733), Expect = 2e-75
 Identities = 134/156 (85%), Positives = 147/156 (94%)
 Frame = +2

Query: 8   GYSRWGSERLYNGHNGEMMRALIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADR 187
           G+SRWG+ER+YNG  GEM+ +LIF+GPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADR
Sbjct: 141 GFSRWGNERVYNGRTGEMVHSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADR 200

Query: 188 KRFGGIKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHICGKCKNITNVIQRAVPGGGK 367
           KRFGGIKFGEMERDCL+AHGAAANLHERLF LSD SQMHICGKCKN+ NVIQR+ P GGK
Sbjct: 201 KRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICGKCKNMANVIQRSAP-GGK 259

Query: 368 IRGPYCRFCDSSENIVKVNVPYGAKLLCQELFSMGI 475
           IRGP+CRFC+S E+IVKV+VPYGAKLLCQELFSMGI
Sbjct: 260 IRGPFCRFCESVEDIVKVDVPYGAKLLCQELFSMGI 295


>ref|XP_006442883.1| hypothetical protein CICLE_v10018562mg [Citrus clementina]
            gi|568850178|ref|XP_006478802.1| PREDICTED: DNA-directed
            RNA polymerases IV and V subunit 2-like [Citrus sinensis]
            gi|557545145|gb|ESR56123.1| hypothetical protein
            CICLE_v10018562mg [Citrus clementina]
          Length = 1198

 Score =  286 bits (732), Expect = 2e-75
 Identities = 132/158 (83%), Positives = 145/158 (91%)
 Frame = +2

Query: 2    RSGYSRWGSERLYNGHNGEMMRALIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVA 181
            R+G+S+WG+ERLY+G  GEM+R+LIFIGPTFYQRLIHM+EDKVKFRNTGPVHPLTRQPVA
Sbjct: 1032 RAGFSKWGTERLYDGRTGEMVRSLIFIGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVA 1091

Query: 182  DRKRFGGIKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHICGKCKNITNVIQRAVPGG 361
            DRKRFGGIKFGEMERDCL+AHGAAANLHERLF LSD  QMHIC KCKN+ NVIQR V GG
Sbjct: 1092 DRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSYQMHICRKCKNVANVIQRVVGGG 1151

Query: 362  GKIRGPYCRFCDSSENIVKVNVPYGAKLLCQELFSMGI 475
             K+RGPYCR CDS ++IVK NVPYGAKLLCQELFSMGI
Sbjct: 1152 RKVRGPYCRICDSGDDIVKANVPYGAKLLCQELFSMGI 1189


>ref|XP_006351506.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Solanum tuberosum]
          Length = 1217

 Score =  285 bits (729), Expect = 5e-75
 Identities = 133/156 (85%), Positives = 146/156 (93%)
 Frame = +2

Query: 8    GYSRWGSERLYNGHNGEMMRALIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADR 187
            G++RWG+ER+YNG  GEM+ +LIF+GPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADR
Sbjct: 1054 GFTRWGNERVYNGRTGEMVHSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADR 1113

Query: 188  KRFGGIKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHICGKCKNITNVIQRAVPGGGK 367
            KRFGGIKFGEMERDCL+AHGAAANLHERLF LSD SQMHICGKCKN+ NVIQR V  GGK
Sbjct: 1114 KRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICGKCKNMANVIQRTVQ-GGK 1172

Query: 368  IRGPYCRFCDSSENIVKVNVPYGAKLLCQELFSMGI 475
            +RGP+CRFC+S E+IVKVNVPYGAKLLCQELFSMGI
Sbjct: 1173 VRGPFCRFCESVEDIVKVNVPYGAKLLCQELFSMGI 1208


>ref|XP_004236361.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a [Solanum
            lycopersicum]
          Length = 1217

 Score =  285 bits (729), Expect = 5e-75
 Identities = 133/156 (85%), Positives = 146/156 (93%)
 Frame = +2

Query: 8    GYSRWGSERLYNGHNGEMMRALIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADR 187
            G++RWG+ER+YNG  GEM+ +LIF+GPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADR
Sbjct: 1054 GFTRWGNERVYNGRTGEMVHSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADR 1113

Query: 188  KRFGGIKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHICGKCKNITNVIQRAVPGGGK 367
            KRFGGIKFGEMERDCL+AHGAAANLHERLF LSD SQMHICGKCKN+ NVIQR V  GGK
Sbjct: 1114 KRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICGKCKNMANVIQRTVQ-GGK 1172

Query: 368  IRGPYCRFCDSSENIVKVNVPYGAKLLCQELFSMGI 475
            +RGP+CRFC+S E+IVKVNVPYGAKLLCQELFSMGI
Sbjct: 1173 VRGPFCRFCESVEDIVKVNVPYGAKLLCQELFSMGI 1208


>ref|XP_002324332.2| DNA-directed RNA polymerase family protein [Populus trichocarpa]
            gi|550317882|gb|EEF02897.2| DNA-directed RNA polymerase
            family protein [Populus trichocarpa]
          Length = 1181

 Score =  285 bits (728), Expect = 6e-75
 Identities = 130/158 (82%), Positives = 147/158 (93%)
 Frame = +2

Query: 2    RSGYSRWGSERLYNGHNGEMMRALIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVA 181
            R+ +SRWG+ER+YNG  GEM+R+LIF+GPTFYQRL+HMAEDKVKFRNTGPVHPLTRQPVA
Sbjct: 1015 RAKFSRWGNERVYNGRTGEMVRSLIFMGPTFYQRLVHMAEDKVKFRNTGPVHPLTRQPVA 1074

Query: 182  DRKRFGGIKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHICGKCKNITNVIQRAVPGG 361
            DRKRFGGIKFGEMERDCL+AHGA+ANLHERLF LSD S+MHIC KCKN+ NVIQR VPGG
Sbjct: 1075 DRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSEMHICQKCKNVANVIQRGVPGG 1134

Query: 362  GKIRGPYCRFCDSSENIVKVNVPYGAKLLCQELFSMGI 475
             KIRGPYCR C+S +++VKV+VPYGAKLLCQELFSMGI
Sbjct: 1135 RKIRGPYCRVCESVDDLVKVSVPYGAKLLCQELFSMGI 1172


>ref|XP_007011718.1| DNA-directed RNA polymerase isoform 2 [Theobroma cacao]
            gi|508782081|gb|EOY29337.1| DNA-directed RNA polymerase
            isoform 2 [Theobroma cacao]
          Length = 961

 Score =  283 bits (725), Expect = 1e-74
 Identities = 130/158 (82%), Positives = 146/158 (92%)
 Frame = +2

Query: 2    RSGYSRWGSERLYNGHNGEMMRALIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVA 181
            R+G+SRWG+ER+YNG  GEM+R+LIF+GPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVA
Sbjct: 795  RAGFSRWGNERVYNGRTGEMVRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVA 854

Query: 182  DRKRFGGIKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHICGKCKNITNVIQRAVPGG 361
            DRKR+GGIKFGEMERDCL+AHGA+ANLHERL  LSD SQMH+C  CKN+ NVI+RAVPGG
Sbjct: 855  DRKRYGGIKFGEMERDCLIAHGASANLHERLVTLSDSSQMHVCRNCKNVANVIERAVPGG 914

Query: 362  GKIRGPYCRFCDSSENIVKVNVPYGAKLLCQELFSMGI 475
             KIRGPYCR C S ++IV+VNVPYGAKLLCQELFSMGI
Sbjct: 915  RKIRGPYCRGCQSVDDIVRVNVPYGAKLLCQELFSMGI 952


>ref|XP_007011717.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
            gi|508782080|gb|EOY29336.1| DNA-directed RNA polymerase
            isoform 1 [Theobroma cacao]
          Length = 1184

 Score =  283 bits (725), Expect = 1e-74
 Identities = 130/158 (82%), Positives = 146/158 (92%)
 Frame = +2

Query: 2    RSGYSRWGSERLYNGHNGEMMRALIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVA 181
            R+G+SRWG+ER+YNG  GEM+R+LIF+GPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVA
Sbjct: 1018 RAGFSRWGNERVYNGRTGEMVRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVA 1077

Query: 182  DRKRFGGIKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHICGKCKNITNVIQRAVPGG 361
            DRKR+GGIKFGEMERDCL+AHGA+ANLHERL  LSD SQMH+C  CKN+ NVI+RAVPGG
Sbjct: 1078 DRKRYGGIKFGEMERDCLIAHGASANLHERLVTLSDSSQMHVCRNCKNVANVIERAVPGG 1137

Query: 362  GKIRGPYCRFCDSSENIVKVNVPYGAKLLCQELFSMGI 475
             KIRGPYCR C S ++IV+VNVPYGAKLLCQELFSMGI
Sbjct: 1138 RKIRGPYCRGCQSVDDIVRVNVPYGAKLLCQELFSMGI 1175


>ref|XP_002447199.1| hypothetical protein SORBIDRAFT_06g030300 [Sorghum bicolor]
            gi|241938382|gb|EES11527.1| hypothetical protein
            SORBIDRAFT_06g030300 [Sorghum bicolor]
          Length = 1239

 Score =  283 bits (724), Expect = 2e-74
 Identities = 128/159 (80%), Positives = 145/159 (91%)
 Frame = +2

Query: 2    RSGYSRWGSERLYNGHNGEMMRALIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVA 181
            ++GYSRWG+E + NG  GE M++L+F+GPTFYQRLIHM+EDKVKFRNTGPVHPLTRQPVA
Sbjct: 1073 KAGYSRWGAENVLNGRTGERMQSLVFMGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVA 1132

Query: 182  DRKRFGGIKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHICGKCKNITNVIQRAVPGG 361
            DRKRFGG+KFGEMERDCLLAHG+AANLHERLFMLSDFSQMHIC  C+ + NV+ R+VPGG
Sbjct: 1133 DRKRFGGVKFGEMERDCLLAHGSAANLHERLFMLSDFSQMHICQTCERVANVVMRSVPGG 1192

Query: 362  GKIRGPYCRFCDSSENIVKVNVPYGAKLLCQELFSMGIC 478
             KIRGPYC FC SSENIV++NVPYGAKLL QELFSMGIC
Sbjct: 1193 KKIRGPYCGFCKSSENIVRINVPYGAKLLYQELFSMGIC 1231


>gb|ADB19859.1| mutant required to maintain repression 7-2/ RNA polymerase D second
            largest subunit 2-2 [Zea mays]
          Length = 1229

 Score =  283 bits (723), Expect = 2e-74
 Identities = 128/159 (80%), Positives = 145/159 (91%)
 Frame = +2

Query: 2    RSGYSRWGSERLYNGHNGEMMRALIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVA 181
            R+GYSRWGSE + NG  GE +++L+F+GPTFYQRLIHM+EDKVKFRNTGPVHPLTRQPVA
Sbjct: 1063 RAGYSRWGSENVLNGRTGERVQSLVFMGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVA 1122

Query: 182  DRKRFGGIKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHICGKCKNITNVIQRAVPGG 361
            DRKRFGG+KFGEMERDCLLAHG+AANLHERLF+LSDFSQMHIC  C+ + NV+ R+VPGG
Sbjct: 1123 DRKRFGGVKFGEMERDCLLAHGSAANLHERLFLLSDFSQMHICQTCERVANVVMRSVPGG 1182

Query: 362  GKIRGPYCRFCDSSENIVKVNVPYGAKLLCQELFSMGIC 478
             KIRGPYC FC SSENIV++NVPYGAKLL QELFSMGIC
Sbjct: 1183 KKIRGPYCGFCKSSENIVRINVPYGAKLLYQELFSMGIC 1221


>ref|NP_001177299.1| required to maintain repression7 [Zea mays]
            gi|283443696|gb|ADB19857.1| required to maintain
            repression 7/RNA polymerase D second largest subunit [Zea
            mays] gi|297185477|gb|ADI24118.1| RPD2/E2a [Zea mays]
            gi|414585188|tpg|DAA35759.1| TPA: putative DNA-directed
            RNA polymerase subunit family protein [Zea mays]
          Length = 1229

 Score =  283 bits (723), Expect = 2e-74
 Identities = 128/159 (80%), Positives = 145/159 (91%)
 Frame = +2

Query: 2    RSGYSRWGSERLYNGHNGEMMRALIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVA 181
            R+GYSRWGSE + NG  GE +++L+F+GPTFYQRLIHM+EDKVKFRNTGPVHPLTRQPVA
Sbjct: 1063 RAGYSRWGSENVLNGRTGERVQSLVFMGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVA 1122

Query: 182  DRKRFGGIKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHICGKCKNITNVIQRAVPGG 361
            DRKRFGG+KFGEMERDCLLAHG+AANLHERLF+LSDFSQMHIC  C+ + NV+ R+VPGG
Sbjct: 1123 DRKRFGGVKFGEMERDCLLAHGSAANLHERLFLLSDFSQMHICQTCERVANVVMRSVPGG 1182

Query: 362  GKIRGPYCRFCDSSENIVKVNVPYGAKLLCQELFSMGIC 478
             KIRGPYC FC SSENIV++NVPYGAKLL QELFSMGIC
Sbjct: 1183 KKIRGPYCGFCKSSENIVRINVPYGAKLLYQELFSMGIC 1221


>gb|AAY45706.1| RNA polymerase IV second largest subunit [Zea mays]
          Length = 1170

 Score =  283 bits (723), Expect = 2e-74
 Identities = 128/159 (80%), Positives = 145/159 (91%)
 Frame = +2

Query: 2    RSGYSRWGSERLYNGHNGEMMRALIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVA 181
            R+GYSRWGSE + NG  GE +++L+F+GPTFYQRLIHM+EDKVKFRNTGPVHPLTRQPVA
Sbjct: 1004 RAGYSRWGSENVLNGRTGERVQSLVFMGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVA 1063

Query: 182  DRKRFGGIKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHICGKCKNITNVIQRAVPGG 361
            DRKRFGG+KFGEMERDCLLAHG+AANLHERLF+LSDFSQMHIC  C+ + NV+ R+VPGG
Sbjct: 1064 DRKRFGGVKFGEMERDCLLAHGSAANLHERLFLLSDFSQMHICQTCERVANVVMRSVPGG 1123

Query: 362  GKIRGPYCRFCDSSENIVKVNVPYGAKLLCQELFSMGIC 478
             KIRGPYC FC SSENIV++NVPYGAKLL QELFSMGIC
Sbjct: 1124 KKIRGPYCGFCKSSENIVRINVPYGAKLLYQELFSMGIC 1162


>gb|AFW59623.1| putative DNA-directed RNA polymerase subunit family protein [Zea
            mays]
          Length = 2163

 Score =  282 bits (722), Expect = 3e-74
 Identities = 127/159 (79%), Positives = 145/159 (91%)
 Frame = +2

Query: 2    RSGYSRWGSERLYNGHNGEMMRALIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVA 181
            ++GYSRWG+E + NG  GE M++L+F+GPTFYQRLIHM+EDKVK+RNTGPVHPLTRQPVA
Sbjct: 1997 KAGYSRWGAENVLNGRTGERMKSLVFMGPTFYQRLIHMSEDKVKYRNTGPVHPLTRQPVA 2056

Query: 182  DRKRFGGIKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHICGKCKNITNVIQRAVPGG 361
            DRKRFGG+KFGEMERDCLLAHG+AANLHERLFMLSDFSQMHIC  C+ + NV+ R+VPGG
Sbjct: 2057 DRKRFGGVKFGEMERDCLLAHGSAANLHERLFMLSDFSQMHICQTCERVANVVMRSVPGG 2116

Query: 362  GKIRGPYCRFCDSSENIVKVNVPYGAKLLCQELFSMGIC 478
             KIRGPYC FC SSENIV++NVPYGAKLL QELFSMGIC
Sbjct: 2117 KKIRGPYCGFCKSSENIVRINVPYGAKLLYQELFSMGIC 2155


>gb|EEE61785.1| hypothetical protein OsJ_16357 [Oryza sativa Japonica Group]
          Length = 1185

 Score =  282 bits (722), Expect = 3e-74
 Identities = 130/159 (81%), Positives = 143/159 (89%)
 Frame = +2

Query: 2    RSGYSRWGSERLYNGHNGEMMRALIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVA 181
            ++G+SRWG+E + NG  GE M +LIF+GPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVA
Sbjct: 1019 KAGFSRWGAESVLNGRTGERMHSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVA 1078

Query: 182  DRKRFGGIKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHICGKCKNITNVIQRAVPGG 361
            DRKRFGG+KFGEMERDCLLAHGAAANLHERLFMLSDFSQMH+C  C+ + NVI R VPGG
Sbjct: 1079 DRKRFGGVKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHVCQTCERVANVIMRPVPGG 1138

Query: 362  GKIRGPYCRFCDSSENIVKVNVPYGAKLLCQELFSMGIC 478
             KIRGPYC FC SSENIV++NVPYGAKLL QELFSMGIC
Sbjct: 1139 KKIRGPYCGFCRSSENIVRINVPYGAKLLYQELFSMGIC 1177


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