BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia26_contig00019189
         (1431 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284465.1| PREDICTED: general transcription factor IIH ...   376   e-101
ref|XP_007019036.1| Basal transcription factor complex subunit-r...   358   3e-96
ref|XP_002307429.2| basal transcription factor complex subunit-r...   353   8e-95
ref|XP_007223251.1| hypothetical protein PRUPE_ppa009386mg [Prun...   347   6e-93
ref|XP_004152842.1| PREDICTED: general transcription factor IIH ...   343   1e-91
ref|XP_004290858.1| PREDICTED: general transcription factor IIH ...   340   7e-91
ref|XP_004290857.1| PREDICTED: general transcription factor IIH ...   340   7e-91
ref|XP_006472762.1| PREDICTED: general transcription factor IIH ...   335   2e-89
ref|XP_006416613.1| hypothetical protein EUTSA_v10008316mg [Eutr...   328   5e-87
ref|XP_002892997.1| hypothetical protein ARALYDRAFT_472054 [Arab...   327   8e-87
ref|XP_006347459.1| PREDICTED: general transcription factor IIH ...   325   4e-86
ref|XP_004241513.1| PREDICTED: general transcription factor IIH ...   325   4e-86
ref|NP_564050.1| basal transcription factor complex subunit-rela...   322   2e-85
gb|EYU17663.1| hypothetical protein MIMGU_mgv1a011002mg [Mimulus...   320   1e-84
ref|XP_006472763.1| PREDICTED: general transcription factor IIH ...   319   2e-84
ref|XP_004500559.1| PREDICTED: general transcription factor IIH ...   319   2e-84
ref|XP_006305456.1| hypothetical protein CARUB_v10009867mg [Caps...   319   2e-84
ref|XP_007137405.1| hypothetical protein PHAVU_009G124300g [Phas...   305   4e-80
ref|XP_003523449.1| PREDICTED: general transcription factor IIH ...   303   1e-79
gb|ADE77788.1| unknown [Picea sitchensis]                             301   5e-79

>ref|XP_002284465.1| PREDICTED: general transcription factor IIH subunit 3 [Vitis
            vinifera] gi|302141830|emb|CBI19033.3| unnamed protein
            product [Vitis vinifera]
          Length = 297

 Score =  376 bits (966), Expect = e-101
 Identities = 185/237 (78%), Positives = 198/237 (83%)
 Frame = -2

Query: 1001 ATGLNSCNYVYDSSSSPATIETLENGRMPALCSKTLEKLEDFVMRDERMNEEKTXXXXXX 822
            ATG NSCN+++DSSS PA    LENGRMPALCS  L+KLE+FV  DE++++E        
Sbjct: 61   ATGCNSCNFIFDSSSVPAN-PNLENGRMPALCSNLLQKLEEFVTGDEKLSKEVLAAGIGS 119

Query: 821  XXXXXXXXXXLCYIQRVFRSGPLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQRSMVPID 642
                      LCYIQRVFR+GPLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQRSMVPID
Sbjct: 120  SLLSGSLSMALCYIQRVFRTGPLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQRSMVPID 179

Query: 641  SCIIGAQHSAFLQQASYITGGVYLKAQQLDGLFQYLSTVFATDLQSRSFLQLPKPVGVDF 462
            SC+IGAQHSAFLQQASYITGGVYLK QQLDGLFQYLSTVFATDL SR FLQLPKP GVDF
Sbjct: 180  SCVIGAQHSAFLQQASYITGGVYLKPQQLDGLFQYLSTVFATDLHSRRFLQLPKPAGVDF 239

Query: 461  RASCFCHKKTIDMGYICSVCLSIFCKHHKTCSTCGSVFGQAPPEVTSTSDRKRKTPE 291
            RASCFCHK TIDMGYICSVCLSIFCKHHK CSTCGSVFGQA  +  S +DRKRKTPE
Sbjct: 240  RASCFCHKNTIDMGYICSVCLSIFCKHHKKCSTCGSVFGQAQSDGNSATDRKRKTPE 296


>ref|XP_007019036.1| Basal transcription factor complex subunit-related isoform 1
            [Theobroma cacao] gi|508724364|gb|EOY16261.1| Basal
            transcription factor complex subunit-related isoform 1
            [Theobroma cacao]
          Length = 296

 Score =  358 bits (919), Expect = 3e-96
 Identities = 174/237 (73%), Positives = 194/237 (81%)
 Frame = -2

Query: 1001 ATGLNSCNYVYDSSSSPATIETLENGRMPALCSKTLEKLEDFVMRDERMNEEKTXXXXXX 822
            ATG NSCNY++DSSS     ++ ENGRMP +CS  L+KLE+F+++DE++++E        
Sbjct: 61   ATGYNSCNYIFDSSSD--LNQSFENGRMPVMCSSLLQKLEEFLIKDEQLSKEVPEGRIKS 118

Query: 821  XXXXXXXXXXLCYIQRVFRSGPLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQRSMVPID 642
                      LCYIQRVFRSG LHP PRILCLQGSPDGPEQYVA+MNAIFSAQRSMVPID
Sbjct: 119  SLLSGSLSMALCYIQRVFRSGALHPHPRILCLQGSPDGPEQYVAIMNAIFSAQRSMVPID 178

Query: 641  SCIIGAQHSAFLQQASYITGGVYLKAQQLDGLFQYLSTVFATDLQSRSFLQLPKPVGVDF 462
            SC +GAQ+SAFLQQASYITGGV+ K Q LDGLFQYL T+FATDL SRSFL LPKPVGVDF
Sbjct: 179  SCYMGAQNSAFLQQASYITGGVHHKPQHLDGLFQYLMTIFATDLHSRSFLHLPKPVGVDF 238

Query: 461  RASCFCHKKTIDMGYICSVCLSIFCKHHKTCSTCGSVFGQAPPEVTSTSDRKRKTPE 291
            RASCFCHK TIDMGYICSVCLSIFCKHHK CSTCGSVFGQA  E  STSD+KRKTPE
Sbjct: 239  RASCFCHKNTIDMGYICSVCLSIFCKHHKKCSTCGSVFGQAQSEAASTSDKKRKTPE 295


>ref|XP_002307429.2| basal transcription factor complex subunit-related family protein
            [Populus trichocarpa] gi|550339079|gb|EEE94425.2| basal
            transcription factor complex subunit-related family
            protein [Populus trichocarpa]
          Length = 298

 Score =  353 bits (907), Expect = 8e-95
 Identities = 170/237 (71%), Positives = 197/237 (83%)
 Frame = -2

Query: 1001 ATGLNSCNYVYDSSSSPATIETLENGRMPALCSKTLEKLEDFVMRDERMNEEKTXXXXXX 822
            A+G N+C+Y+YDSSS  + + + E+GRMP+L S  L+KLE+F+++DE++ +E++      
Sbjct: 62   ASGYNTCDYIYDSSSDASQLGS-EDGRMPSLYSNLLQKLEEFMIKDEKLGKEQSQRAIKS 120

Query: 821  XXXXXXXXXXLCYIQRVFRSGPLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQRSMVPID 642
                      LCYIQRVFRSGPLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQRSMVPID
Sbjct: 121  SLLSGSLSMALCYIQRVFRSGPLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQRSMVPID 180

Query: 641  SCIIGAQHSAFLQQASYITGGVYLKAQQLDGLFQYLSTVFATDLQSRSFLQLPKPVGVDF 462
            SC +GA +SAFLQQASYITGGVY+K Q LDGLFQYL+TVFATDL SRSF+QLP+P GVDF
Sbjct: 181  SCYVGAHNSAFLQQASYITGGVYVKPQHLDGLFQYLTTVFATDLHSRSFIQLPRPAGVDF 240

Query: 461  RASCFCHKKTIDMGYICSVCLSIFCKHHKTCSTCGSVFGQAPPEVTSTSDRKRKTPE 291
            RASCFCHK TIDMGYICSVCLSIFC HHK CSTCGSVFGQA  + +STSD KRK PE
Sbjct: 241  RASCFCHKTTIDMGYICSVCLSIFCNHHKKCSTCGSVFGQAQSDTSSTSDLKRKAPE 297


>ref|XP_007223251.1| hypothetical protein PRUPE_ppa009386mg [Prunus persica]
            gi|462420187|gb|EMJ24450.1| hypothetical protein
            PRUPE_ppa009386mg [Prunus persica]
          Length = 295

 Score =  347 bits (891), Expect = 6e-93
 Identities = 174/237 (73%), Positives = 195/237 (82%)
 Frame = -2

Query: 1001 ATGLNSCNYVYDSSSSPATIETLENGRMPALCSKTLEKLEDFVMRDERMNEEKTXXXXXX 822
            ATG NSC+Y+YDSS+S  T +  +NGRMPA C   L+KLE+FV+ DE++ +E        
Sbjct: 61   ATGYNSCSYIYDSSTS--TNQGSDNGRMPARCVNLLQKLEEFVIEDEQLIKEGLREGIAS 118

Query: 821  XXXXXXXXXXLCYIQRVFRSGPLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQRSMVPID 642
                      LCYIQRVFRSGPLHPQPRILCLQGS DGPEQYVA+MNAIFSAQRS VPID
Sbjct: 119  SLLSGSLSMALCYIQRVFRSGPLHPQPRILCLQGSSDGPEQYVAIMNAIFSAQRS-VPID 177

Query: 641  SCIIGAQHSAFLQQASYITGGVYLKAQQLDGLFQYLSTVFATDLQSRSFLQLPKPVGVDF 462
            SC +G+ +SAFLQQASYITGGVYLK QQ +GLFQYLSTVFATDL SR+FLQLPK +GVDF
Sbjct: 178  SCYMGSSNSAFLQQASYITGGVYLKPQQPNGLFQYLSTVFATDLHSRAFLQLPKSLGVDF 237

Query: 461  RASCFCHKKTIDMGYICSVCLSIFCKHHKTCSTCGSVFGQAPPEVTSTSDRKRKTPE 291
            RASCFCHKKTIDMGYICSVCLSIFCKHHK CSTCGSVFGQA  +V STS++KRKTPE
Sbjct: 238  RASCFCHKKTIDMGYICSVCLSIFCKHHKKCSTCGSVFGQAQSDVNSTSNKKRKTPE 294


>ref|XP_004152842.1| PREDICTED: general transcription factor IIH subunit 3-like [Cucumis
           sativus]
          Length = 295

 Score =  343 bits (880), Expect = 1e-91
 Identities = 170/236 (72%), Positives = 190/236 (80%)
 Frame = -2

Query: 998 TGLNSCNYVYDSSSSPATIETLENGRMPALCSKTLEKLEDFVMRDERMNEEKTXXXXXXX 819
           TG  SC Y+Y+SSS   +   LE+GRMPALC++ L+ LE+FV+ DE+  +E         
Sbjct: 62  TGYASCKYLYNSSSY--SNHGLEDGRMPALCTRLLKNLEEFVIGDEQSIKEDPKGGTMSS 119

Query: 818 XXXXXXXXXLCYIQRVFRSGPLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQRSMVPIDS 639
                    LCYIQ+VFRSG LHPQPRILCLQGSPDGPEQYVA+MNAIFSAQRSMVPIDS
Sbjct: 120 LLSGSLSMALCYIQKVFRSGSLHPQPRILCLQGSPDGPEQYVAIMNAIFSAQRSMVPIDS 179

Query: 638 CIIGAQHSAFLQQASYITGGVYLKAQQLDGLFQYLSTVFATDLQSRSFLQLPKPVGVDFR 459
           C IG+ +SAFLQQASYITGGVYLK QQ+DGLFQYLSTVF TDL SR+FLQLPK VGVDFR
Sbjct: 180 CYIGSHNSAFLQQASYITGGVYLKPQQMDGLFQYLSTVFGTDLHSRTFLQLPKSVGVDFR 239

Query: 458 ASCFCHKKTIDMGYICSVCLSIFCKHHKTCSTCGSVFGQAPPEVTSTSDRKRKTPE 291
           ASCFCHKKTIDMGY+CSVCLSIFCKHHK CSTCGSVFG+ P E+ S S  KRKTPE
Sbjct: 240 ASCFCHKKTIDMGYVCSVCLSIFCKHHKKCSTCGSVFGETPVELDSVSKLKRKTPE 295


>ref|XP_004290858.1| PREDICTED: general transcription factor IIH subunit 3-like isoform 2
            [Fragaria vesca subsp. vesca]
          Length = 298

 Score =  340 bits (873), Expect = 7e-91
 Identities = 167/237 (70%), Positives = 192/237 (81%)
 Frame = -2

Query: 1001 ATGLNSCNYVYDSSSSPATIETLENGRMPALCSKTLEKLEDFVMRDERMNEEKTXXXXXX 822
            ATG +SC+Y+YDS+S+P   +  + GRMPALCS  L+KLE+FV +DE++ +E +      
Sbjct: 61   ATGYSSCSYIYDSASAPG--QGSDQGRMPALCSHLLKKLEEFVAKDEQLLKEGSAEGIPS 118

Query: 821  XXXXXXXXXXLCYIQRVFRSGPLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQRSMVPID 642
                      LCYIQ+VFRSGP HP PRILCLQGS DGPEQYVA+MNAIFSAQRSMVPID
Sbjct: 119  SLLSGSLSMALCYIQKVFRSGPQHPHPRILCLQGSSDGPEQYVAIMNAIFSAQRSMVPID 178

Query: 641  SCIIGAQHSAFLQQASYITGGVYLKAQQLDGLFQYLSTVFATDLQSRSFLQLPKPVGVDF 462
            SC +G+ +SAFLQQASYITGGVYLK QQ DGL QYL+TVFATDL SR+FLQLPK  GVDF
Sbjct: 179  SCYMGSNNSAFLQQASYITGGVYLKPQQPDGLLQYLTTVFATDLHSRAFLQLPKSAGVDF 238

Query: 461  RASCFCHKKTIDMGYICSVCLSIFCKHHKTCSTCGSVFGQAPPEVTSTSDRKRKTPE 291
            RASCFCHKKTID GYICSVCLSIFCKHHK CSTCGSVFGQA  EV ST+++KRK+ E
Sbjct: 239  RASCFCHKKTIDTGYICSVCLSIFCKHHKKCSTCGSVFGQAQSEVPSTTNKKRKSSE 295


>ref|XP_004290857.1| PREDICTED: general transcription factor IIH subunit 3-like isoform 1
            [Fragaria vesca subsp. vesca]
          Length = 300

 Score =  340 bits (873), Expect = 7e-91
 Identities = 167/237 (70%), Positives = 192/237 (81%)
 Frame = -2

Query: 1001 ATGLNSCNYVYDSSSSPATIETLENGRMPALCSKTLEKLEDFVMRDERMNEEKTXXXXXX 822
            ATG +SC+Y+YDS+S+P   +  + GRMPALCS  L+KLE+FV +DE++ +E +      
Sbjct: 61   ATGYSSCSYIYDSASAPG--QGSDQGRMPALCSHLLKKLEEFVAKDEQLLKEGSAEGIPS 118

Query: 821  XXXXXXXXXXLCYIQRVFRSGPLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQRSMVPID 642
                      LCYIQ+VFRSGP HP PRILCLQGS DGPEQYVA+MNAIFSAQRSMVPID
Sbjct: 119  SLLSGSLSMALCYIQKVFRSGPQHPHPRILCLQGSSDGPEQYVAIMNAIFSAQRSMVPID 178

Query: 641  SCIIGAQHSAFLQQASYITGGVYLKAQQLDGLFQYLSTVFATDLQSRSFLQLPKPVGVDF 462
            SC +G+ +SAFLQQASYITGGVYLK QQ DGL QYL+TVFATDL SR+FLQLPK  GVDF
Sbjct: 179  SCYMGSNNSAFLQQASYITGGVYLKPQQPDGLLQYLTTVFATDLHSRAFLQLPKSAGVDF 238

Query: 461  RASCFCHKKTIDMGYICSVCLSIFCKHHKTCSTCGSVFGQAPPEVTSTSDRKRKTPE 291
            RASCFCHKKTID GYICSVCLSIFCKHHK CSTCGSVFGQA  EV ST+++KRK+ E
Sbjct: 239  RASCFCHKKTIDTGYICSVCLSIFCKHHKKCSTCGSVFGQAQSEVPSTTNKKRKSSE 295


>ref|XP_006472762.1| PREDICTED: general transcription factor IIH subunit 3-like isoform X1
            [Citrus sinensis]
          Length = 298

 Score =  335 bits (860), Expect = 2e-89
 Identities = 167/240 (69%), Positives = 194/240 (80%), Gaps = 2/240 (0%)
 Frame = -2

Query: 1001 ATGLNSCNYVYDSSSSPATIETLENGRMPALCSKTLEKLEDFVMRDERMNEEKTXXXXXX 822
            ATG NSC+YVYDSSS+    +++ NGRMP+LC+  L+ LE+F+ +DE++ +++       
Sbjct: 61   ATGYNSCDYVYDSSSTGN--QSVGNGRMPSLCATLLQNLEEFMNKDEQLGKQEPEGRIAC 118

Query: 821  XXXXXXXXXXLCYIQRVFRSGPLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQRSMVPID 642
                      LCYIQRVFRSG LHPQPRILCLQGSPDGPEQYVA+MNAIFSAQRSMVPID
Sbjct: 119  SLLSGSLSMALCYIQRVFRSGLLHPQPRILCLQGSPDGPEQYVAIMNAIFSAQRSMVPID 178

Query: 641  SCIIGAQHSAFLQQASYITGGVYLKAQQLDGLFQYLSTVFATDLQSRSFLQLPKPVGVDF 462
            SC +GAQ+SAFLQQASYITGGV+ K QQLDGLFQYL T+F TDL SR+FLQLPKPVGVDF
Sbjct: 179  SCYLGAQNSAFLQQASYITGGVHHKPQQLDGLFQYLLTIFGTDLHSRNFLQLPKPVGVDF 238

Query: 461  RASCFCHKKTIDMGYICSVCLSIFCKHHKTCSTCGSVFGQA--PPEVTSTSDRKRKTPEA 288
            RASCFCHK TIDMGYICSVCLSI+CKH K CSTCGSVFGQA    +  S ++RKRKT +A
Sbjct: 239  RASCFCHKNTIDMGYICSVCLSIYCKHLKKCSTCGSVFGQAQTQSDEPSATNRKRKTTDA 298


>ref|XP_006416613.1| hypothetical protein EUTSA_v10008316mg [Eutrema salsugineum]
            gi|557094384|gb|ESQ34966.1| hypothetical protein
            EUTSA_v10008316mg [Eutrema salsugineum]
          Length = 300

 Score =  328 bits (840), Expect = 5e-87
 Identities = 165/239 (69%), Positives = 187/239 (78%), Gaps = 2/239 (0%)
 Frame = -2

Query: 1001 ATGLNSCNYVYDSSSSPATIETLENGRMPALCSKTLEKLEDFVMRDERMN-EEKTXXXXX 825
            ATG +SC+Y+YDSS +P          MPAL    LEKLEDF  +DE ++ EE+      
Sbjct: 61   ATGYSSCDYIYDSSLTPNGNFESSGSGMPALFGSLLEKLEDFAAKDEELSKEEEHEDRIA 120

Query: 824  XXXXXXXXXXXLCYIQRVFRSGPLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQRSMVPI 645
                       LCYIQRVFRSG LHPQPRILCLQGSPDGPEQYVAVMN+IFSAQR MVPI
Sbjct: 121  SSLLSGSLSMALCYIQRVFRSGHLHPQPRILCLQGSPDGPEQYVAVMNSIFSAQRLMVPI 180

Query: 644  DSCIIGAQHSAFLQQASYITGGVYLKAQQLDGLFQYLSTVFATDLQSRSFLQLPKPVGVD 465
            DSC IG Q+SAFLQQASYITGGV+   +QLDGLFQYL+T+FATDL SR F+QLPKPVGVD
Sbjct: 181  DSCYIGTQNSAFLQQASYITGGVHHTPKQLDGLFQYLTTIFATDLHSRGFVQLPKPVGVD 240

Query: 464  FRASCFCHKKTIDMGYICSVCLSIFCKHHKTCSTCGSVFGQAP-PEVTSTSDRKRKTPE 291
            FRASCFCHKKTIDMGYICSVCLSIFC+HHK CSTCGSVFGQ+   +V+S S++KRK P+
Sbjct: 241  FRASCFCHKKTIDMGYICSVCLSIFCEHHKKCSTCGSVFGQSKLDDVSSVSNKKRKAPD 299


>ref|XP_002892997.1| hypothetical protein ARALYDRAFT_472054 [Arabidopsis lyrata subsp.
            lyrata] gi|297338839|gb|EFH69256.1| hypothetical protein
            ARALYDRAFT_472054 [Arabidopsis lyrata subsp. lyrata]
          Length = 301

 Score =  327 bits (838), Expect = 8e-87
 Identities = 167/240 (69%), Positives = 191/240 (79%), Gaps = 4/240 (1%)
 Frame = -2

Query: 1001 ATGLNSCNYVYDSS--SSPATIETLENGRMPALCSKTLEKLEDFVMRDERMN-EEKTXXX 831
            ATG +SC+Y+YDSS  S+   +E+   G MPAL    L+KLEDFV +DE ++ EE +   
Sbjct: 61   ATGYSSCDYIYDSSLTSNHGNLESNGTG-MPALFGSLLKKLEDFVTKDEELSREEVSEDR 119

Query: 830  XXXXXXXXXXXXXLCYIQRVFRSGPLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQRSMV 651
                         LCYIQRVFRSG LHPQPRILCLQGSPDGPEQYVAVMN+IFSAQR MV
Sbjct: 120  IPSCLLSGSLSMALCYIQRVFRSGHLHPQPRILCLQGSPDGPEQYVAVMNSIFSAQRLMV 179

Query: 650  PIDSCIIGAQHSAFLQQASYITGGVYLKAQQLDGLFQYLSTVFATDLQSRSFLQLPKPVG 471
            PIDSC IG Q+SAFLQQASYITGGV+   +QLDGLFQYL+T+FATDL SRSF+QLPKP+G
Sbjct: 180  PIDSCYIGVQNSAFLQQASYITGGVHHTPKQLDGLFQYLTTIFATDLHSRSFVQLPKPIG 239

Query: 470  VDFRASCFCHKKTIDMGYICSVCLSIFCKHHKTCSTCGSVFGQAP-PEVTSTSDRKRKTP 294
            VDFRASCFCHKKTIDMGYICSVCLSIFC+HHK CSTCGSVFGQ+   + +S SD+KRK P
Sbjct: 240  VDFRASCFCHKKTIDMGYICSVCLSIFCEHHKKCSTCGSVFGQSKLDDASSVSDKKRKAP 299


>ref|XP_006347459.1| PREDICTED: general transcription factor IIH subunit 3-like [Solanum
            tuberosum]
          Length = 290

 Score =  325 bits (832), Expect = 4e-86
 Identities = 165/233 (70%), Positives = 182/233 (78%)
 Frame = -2

Query: 1001 ATGLNSCNYVYDSSSSPATIETLENGRMPALCSKTLEKLEDFVMRDERMNEEKTXXXXXX 822
            ATG NSC+YV+DSS+S             A C   LEKLEDFV +DE +++E +      
Sbjct: 64   ATGYNSCDYVFDSSTS---------SMQRAEC--LLEKLEDFVDKDESLSQEDSVDGVGF 112

Query: 821  XXXXXXXXXXLCYIQRVFRSGPLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQRSMVPID 642
                      LCYIQRVFRSGPLHPQPRILCL GSPDGP QYVAVMN+IFSAQRSMVPID
Sbjct: 113  SLLSGSLSMALCYIQRVFRSGPLHPQPRILCLHGSPDGPGQYVAVMNSIFSAQRSMVPID 172

Query: 641  SCIIGAQHSAFLQQASYITGGVYLKAQQLDGLFQYLSTVFATDLQSRSFLQLPKPVGVDF 462
            SC+IG+QHSAFLQQASYITGGVYLK Q  DGLFQYLSTVFATDL SRSFLQLP+PVGVDF
Sbjct: 173  SCVIGSQHSAFLQQASYITGGVYLKPQVSDGLFQYLSTVFATDLHSRSFLQLPRPVGVDF 232

Query: 461  RASCFCHKKTIDMGYICSVCLSIFCKHHKTCSTCGSVFGQAPPEVTSTSDRKR 303
            RASCFCHK TIDMG+ICSVCLSIFCKHHK CSTCGS FG+A  +  S SD++R
Sbjct: 233  RASCFCHKNTIDMGFICSVCLSIFCKHHKKCSTCGSNFGEARKQDPSASDQRR 285


>ref|XP_004241513.1| PREDICTED: general transcription factor IIH subunit 3-like [Solanum
            lycopersicum]
          Length = 290

 Score =  325 bits (832), Expect = 4e-86
 Identities = 165/233 (70%), Positives = 182/233 (78%)
 Frame = -2

Query: 1001 ATGLNSCNYVYDSSSSPATIETLENGRMPALCSKTLEKLEDFVMRDERMNEEKTXXXXXX 822
            ATG NSC+YV+DSS+S             A C   LEKLEDFV +DE +++E +      
Sbjct: 64   ATGYNSCDYVFDSSTS---------SMQRAEC--LLEKLEDFVDKDESLSQEDSVDGVGF 112

Query: 821  XXXXXXXXXXLCYIQRVFRSGPLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQRSMVPID 642
                      LCYIQRVFRSGPLHPQPRILCL GSPDGP QYVAVMN+IFSAQRSMVPID
Sbjct: 113  SLLSGALSMALCYIQRVFRSGPLHPQPRILCLHGSPDGPGQYVAVMNSIFSAQRSMVPID 172

Query: 641  SCIIGAQHSAFLQQASYITGGVYLKAQQLDGLFQYLSTVFATDLQSRSFLQLPKPVGVDF 462
            SC+IG+QHSAFLQQASYITGGVYLK Q  DGLFQYLSTVFATDL SRSFLQLP+PVGVDF
Sbjct: 173  SCVIGSQHSAFLQQASYITGGVYLKPQVSDGLFQYLSTVFATDLHSRSFLQLPRPVGVDF 232

Query: 461  RASCFCHKKTIDMGYICSVCLSIFCKHHKTCSTCGSVFGQAPPEVTSTSDRKR 303
            RASCFCHK TIDMG+ICSVCLSIFCKHHK CSTCGS FG+A  +  S SD++R
Sbjct: 233  RASCFCHKNTIDMGFICSVCLSIFCKHHKKCSTCGSNFGEARKQDPSASDQRR 285


>ref|NP_564050.1| basal transcription factor complex subunit-related protein
            [Arabidopsis thaliana] gi|21537277|gb|AAM61618.1| unknown
            [Arabidopsis thaliana] gi|92856638|gb|ABE77412.1|
            At1g18340 [Arabidopsis thaliana]
            gi|332191584|gb|AEE29705.1| basal transcription factor
            complex subunit-related protein [Arabidopsis thaliana]
          Length = 301

 Score =  322 bits (826), Expect = 2e-85
 Identities = 164/240 (68%), Positives = 189/240 (78%), Gaps = 4/240 (1%)
 Frame = -2

Query: 1001 ATGLNSCNYVYDSS--SSPATIETLENGRMPALCSKTLEKLEDFVMRDERMN-EEKTXXX 831
            ATG +SC+Y+YDSS  S+    E+   G MPA+    L+KLE+FV +DE ++ EE +   
Sbjct: 61   ATGYSSCDYIYDSSLTSNHGNFESNGTG-MPAIFGSLLKKLEEFVTKDEELSKEEVSEDR 119

Query: 830  XXXXXXXXXXXXXLCYIQRVFRSGPLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQRSMV 651
                         LCYIQRVFRSG LHPQPRILCLQGSPDGPEQYVAVMN+IFSAQR MV
Sbjct: 120  IPSCLLSGSLSMALCYIQRVFRSGHLHPQPRILCLQGSPDGPEQYVAVMNSIFSAQRLMV 179

Query: 650  PIDSCIIGAQHSAFLQQASYITGGVYLKAQQLDGLFQYLSTVFATDLQSRSFLQLPKPVG 471
            PIDSC IG Q+SAFLQQASYITGGV+   +QLDGLFQYL+T+FATDL SR F+QLPKP+G
Sbjct: 180  PIDSCYIGVQNSAFLQQASYITGGVHHTPKQLDGLFQYLTTIFATDLHSRGFVQLPKPIG 239

Query: 470  VDFRASCFCHKKTIDMGYICSVCLSIFCKHHKTCSTCGSVFGQAP-PEVTSTSDRKRKTP 294
            VDFRASCFCHKKTIDMGYICSVCLSIFC+HHK CSTCGSVFGQ+   + +S SD+KRK P
Sbjct: 240  VDFRASCFCHKKTIDMGYICSVCLSIFCEHHKKCSTCGSVFGQSKLDDASSASDKKRKAP 299


>gb|EYU17663.1| hypothetical protein MIMGU_mgv1a011002mg [Mimulus guttatus]
          Length = 295

 Score =  320 bits (820), Expect = 1e-84
 Identities = 163/239 (68%), Positives = 183/239 (76%), Gaps = 3/239 (1%)
 Frame = -2

Query: 1001 ATGLNSCNYVYDSSSSPATIETLENGRMPALCSKTLEKLEDFVMRDERMNEEKTXXXXXX 822
            ATG NSC+YV+DSS + +  +  E+          L+KLE+FV +DE +  E++      
Sbjct: 63   ATGHNSCDYVFDSSVAQSQNQRAEH---------LLQKLEEFVDKDESLCREESVDGQGF 113

Query: 821  XXXXXXXXXXLCYIQRVFRSGPLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQRSMVPID 642
                      LCYIQRVFRSGPLHP PRILCL GSPDGP QYVA+MN+IFSAQRSMVPID
Sbjct: 114  SLLSGSLSMALCYIQRVFRSGPLHPHPRILCLHGSPDGPGQYVAIMNSIFSAQRSMVPID 173

Query: 641  SCIIGAQHSAFLQQASYITGGVYLKAQQLDGLFQYLSTVFATDLQSRSFLQLPKPVGVDF 462
            +C+IG QHSAFLQQASYITGGVYLK Q LDGLFQYLSTVFATDL SR+FLQLPKP GVDF
Sbjct: 174  ACVIGTQHSAFLQQASYITGGVYLKPQLLDGLFQYLSTVFATDLHSRAFLQLPKPAGVDF 233

Query: 461  RASCFCHKKTIDMGYICSVCLSIFCKHHKTCSTCGSVFGQAPPEVTST---SDRKRKTP 294
            RASCFCHK TIDMGYICSVCLSIFCKH K CSTCGSVFGQA  + +ST    + KRKTP
Sbjct: 234  RASCFCHKNTIDMGYICSVCLSIFCKHQKKCSTCGSVFGQAQAQDSSTPPNPNPKRKTP 292


>ref|XP_006472763.1| PREDICTED: general transcription factor IIH subunit 3-like isoform X2
            [Citrus sinensis]
          Length = 293

 Score =  319 bits (818), Expect = 2e-84
 Identities = 162/240 (67%), Positives = 189/240 (78%), Gaps = 2/240 (0%)
 Frame = -2

Query: 1001 ATGLNSCNYVYDSSSSPATIETLENGRMPALCSKTLEKLEDFVMRDERMNEEKTXXXXXX 822
            ATG NSC+YVYDSSS+    +++ NGRMP+LC+  L+ LE+F+ +DE++ +++       
Sbjct: 61   ATGYNSCDYVYDSSSTGN--QSVGNGRMPSLCATLLQNLEEFMNKDEQLGKQEPEGRIAC 118

Query: 821  XXXXXXXXXXLCYIQRVFRSGPLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQRSMVPID 642
                      LCYIQRVFRSG LHPQPR     GSPDGPEQYVA+MNAIFSAQRSMVPID
Sbjct: 119  SLLSGSLSMALCYIQRVFRSGLLHPQPR-----GSPDGPEQYVAIMNAIFSAQRSMVPID 173

Query: 641  SCIIGAQHSAFLQQASYITGGVYLKAQQLDGLFQYLSTVFATDLQSRSFLQLPKPVGVDF 462
            SC +GAQ+SAFLQQASYITGGV+ K QQLDGLFQYL T+F TDL SR+FLQLPKPVGVDF
Sbjct: 174  SCYLGAQNSAFLQQASYITGGVHHKPQQLDGLFQYLLTIFGTDLHSRNFLQLPKPVGVDF 233

Query: 461  RASCFCHKKTIDMGYICSVCLSIFCKHHKTCSTCGSVFGQA--PPEVTSTSDRKRKTPEA 288
            RASCFCHK TIDMGYICSVCLSI+CKH K CSTCGSVFGQA    +  S ++RKRKT +A
Sbjct: 234  RASCFCHKNTIDMGYICSVCLSIYCKHLKKCSTCGSVFGQAQTQSDEPSATNRKRKTTDA 293


>ref|XP_004500559.1| PREDICTED: general transcription factor IIH subunit 3-like isoform X2
            [Cicer arietinum]
          Length = 294

 Score =  319 bits (817), Expect = 2e-84
 Identities = 155/234 (66%), Positives = 178/234 (76%)
 Frame = -2

Query: 1001 ATGLNSCNYVYDSSSSPATIETLENGRMPALCSKTLEKLEDFVMRDERMNEEKTXXXXXX 822
            ATG NSC Y+YDS+S+     T  NG MPAL S  L  LE+F+ RD+++           
Sbjct: 61   ATGCNSCGYIYDSTSNRNHAST--NGTMPALYSNLLHNLEEFLARDQKLTMPHAPVTVPS 118

Query: 821  XXXXXXXXXXLCYIQRVFRSGPLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQRSMVPID 642
                      LCYIQR FRSGP+HPQPRILCLQGS DGPEQYVA+MNAIFSAQRS VP+D
Sbjct: 119  SLLSGSLSMALCYIQRAFRSGPMHPQPRILCLQGSTDGPEQYVAIMNAIFSAQRSSVPVD 178

Query: 641  SCIIGAQHSAFLQQASYITGGVYLKAQQLDGLFQYLSTVFATDLQSRSFLQLPKPVGVDF 462
            SC IG+ +SAFLQQASYITGG+Y +  Q+DGLFQYLSTVFATDL SR+FL+LPK +GVDF
Sbjct: 179  SCYIGSNNSAFLQQASYITGGIYYRPPQMDGLFQYLSTVFATDLHSRAFLRLPKSLGVDF 238

Query: 461  RASCFCHKKTIDMGYICSVCLSIFCKHHKTCSTCGSVFGQAPPEVTSTSDRKRK 300
            RASCFCHK+TIDMGY+CSVCLSIFC+HH  CSTC SVFGQA   V S  +RKRK
Sbjct: 239  RASCFCHKQTIDMGYVCSVCLSIFCEHHDKCSTCSSVFGQAQSNVASADNRKRK 292


>ref|XP_006305456.1| hypothetical protein CARUB_v10009867mg [Capsella rubella]
            gi|482574167|gb|EOA38354.1| hypothetical protein
            CARUB_v10009867mg [Capsella rubella]
          Length = 301

 Score =  319 bits (817), Expect = 2e-84
 Identities = 164/241 (68%), Positives = 186/241 (77%), Gaps = 4/241 (1%)
 Frame = -2

Query: 1001 ATGLNSCNYVYDSS--SSPATIETLENGRMPALCSKTLEKLEDFVMRDERMN-EEKTXXX 831
            ATG +SC Y+YDSS  S+  + E    G MP L +  L KLEDFV +DE ++ EE     
Sbjct: 61   ATGYSSCEYIYDSSLTSNHGSFERDRTG-MPPLFASLLNKLEDFVTKDEELSREEGNEDR 119

Query: 830  XXXXXXXXXXXXXLCYIQRVFRSGPLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQRSMV 651
                         LCYIQRVFRSG LHPQPRILCLQGSPDGPEQYVAVMN+IFSAQR MV
Sbjct: 120  TPSCLLSGSLSMALCYIQRVFRSGHLHPQPRILCLQGSPDGPEQYVAVMNSIFSAQRLMV 179

Query: 650  PIDSCIIGAQHSAFLQQASYITGGVYLKAQQLDGLFQYLSTVFATDLQSRSFLQLPKPVG 471
            PIDSC IG Q+SAFLQQASYITGGV+   +QLDGLFQYL+T+FATDL SR F+QLPKP+G
Sbjct: 180  PIDSCYIGVQNSAFLQQASYITGGVHHTPKQLDGLFQYLTTIFATDLHSRGFVQLPKPIG 239

Query: 470  VDFRASCFCHKKTIDMGYICSVCLSIFCKHHKTCSTCGSVFGQAP-PEVTSTSDRKRKTP 294
            VDFRASCFCHKKTIDMGYICSVCLSIFC+HHK CSTCGSVFGQ+   E +S SD+K+K  
Sbjct: 240  VDFRASCFCHKKTIDMGYICSVCLSIFCEHHKKCSTCGSVFGQSKLDESSSVSDKKKKAS 299

Query: 293  E 291
            +
Sbjct: 300  Q 300


>ref|XP_007137405.1| hypothetical protein PHAVU_009G124300g [Phaseolus vulgaris]
            gi|561010492|gb|ESW09399.1| hypothetical protein
            PHAVU_009G124300g [Phaseolus vulgaris]
          Length = 292

 Score =  305 bits (780), Expect = 4e-80
 Identities = 154/234 (65%), Positives = 176/234 (75%)
 Frame = -2

Query: 1001 ATGLNSCNYVYDSSSSPATIETLENGRMPALCSKTLEKLEDFVMRDERMNEEKTXXXXXX 822
            ATG NSC YVYDS+S      T   G MPAL S  L  L +F+ RD+++           
Sbjct: 61   ATGCNSCAYVYDSTSERNHGST--TGTMPALYSNLLHNLHEFLARDKQLEASHKPGTVPS 118

Query: 821  XXXXXXXXXXLCYIQRVFRSGPLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQRSMVPID 642
                      LCYIQR FRSGP+ PQPRILCLQG+ DGPEQYVA+MNAIFSAQRS VPID
Sbjct: 119  SLLSGSLSMALCYIQRAFRSGPMPPQPRILCLQGTADGPEQYVAIMNAIFSAQRSTVPID 178

Query: 641  SCIIGAQHSAFLQQASYITGGVYLKAQQLDGLFQYLSTVFATDLQSRSFLQLPKPVGVDF 462
            SC IG+ +SAFLQQASYITGG+Y K  QLDGL+QYLSTVFATDL SR+FL+LPK VGVDF
Sbjct: 179  SCYIGSNNSAFLQQASYITGGIYYKPPQLDGLYQYLSTVFATDLHSRAFLRLPKSVGVDF 238

Query: 461  RASCFCHKKTIDMGYICSVCLSIFCKHHKTCSTCGSVFGQAPPEVTSTSDRKRK 300
            RASCFCHK+TIDMG++CSVCLSIFC+HH  CSTCGSVFGQA  +  S ++RKRK
Sbjct: 239  RASCFCHKQTIDMGFVCSVCLSIFCEHHDKCSTCGSVFGQAKVD-ASEANRKRK 291


>ref|XP_003523449.1| PREDICTED: general transcription factor IIH subunit 3-like isoform X1
            [Glycine max]
          Length = 294

 Score =  303 bits (776), Expect = 1e-79
 Identities = 153/236 (64%), Positives = 178/236 (75%), Gaps = 2/236 (0%)
 Frame = -2

Query: 1001 ATGLNSCNYVYDSSSSPATIETLENGRMPALCSKTLEKLEDFVMRDERMNEEKTXXXXXX 822
            ATG NSC YVYDS+S      T   G MPAL S  L  L++F+ RD +++ + +      
Sbjct: 61   ATGCNSCGYVYDSTSDKNHGST--TGTMPALYSNLLHNLDEFLARDRQLDADASHAPGIV 118

Query: 821  XXXXXXXXXXL--CYIQRVFRSGPLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQRSMVP 648
                      +  CYIQR FRSGP+ PQPRILCLQG+ DGPEQYVA+MNAIFSAQ S VP
Sbjct: 119  PSSLLSGSLSMALCYIQRAFRSGPMPPQPRILCLQGAADGPEQYVAIMNAIFSAQHSTVP 178

Query: 647  IDSCIIGAQHSAFLQQASYITGGVYLKAQQLDGLFQYLSTVFATDLQSRSFLQLPKPVGV 468
            IDSC IG+ +SAFLQQASYITGG+Y K  QLDGL+QYLSTVFATDL SR+FL+LPK VGV
Sbjct: 179  IDSCYIGSNNSAFLQQASYITGGIYYKPPQLDGLYQYLSTVFATDLHSRAFLRLPKSVGV 238

Query: 467  DFRASCFCHKKTIDMGYICSVCLSIFCKHHKTCSTCGSVFGQAPPEVTSTSDRKRK 300
            DFRASCFCHK+TIDMGY+CSVCLSIFC+HH  CSTCGSVFGQA  +  S +DR+RK
Sbjct: 239  DFRASCFCHKQTIDMGYVCSVCLSIFCEHHDKCSTCGSVFGQAQLD-ASAADRQRK 293


>gb|ADE77788.1| unknown [Picea sitchensis]
          Length = 306

 Score =  301 bits (771), Expect = 5e-79
 Identities = 148/237 (62%), Positives = 177/237 (74%), Gaps = 4/237 (1%)
 Frame = -2

Query: 998 TGLNSCNYVYDSSSSPATIETLENGRMPA--LCSKTL--EKLEDFVMRDERMNEEKTXXX 831
           TG NSC ++YDSS++ +  +  ++ +     L   T+  ++LEDFV RD+ +N       
Sbjct: 74  TGTNSCEFIYDSSTTNSEYKKSKDTKCSQEFLTPSTIIVQQLEDFVRRDQALNTNNNATK 133

Query: 830 XXXXXXXXXXXXXLCYIQRVFRSGPLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQRSMV 651
                        LCYIQR+ R GP HPQPRILCLQGSPDGP+QYVA+MNAIFSAQRSMV
Sbjct: 134 NIHSLLSGSLSMALCYIQRIIRGGPSHPQPRILCLQGSPDGPQQYVAIMNAIFSAQRSMV 193

Query: 650 PIDSCIIGAQHSAFLQQASYITGGVYLKAQQLDGLFQYLSTVFATDLQSRSFLQLPKPVG 471
           P+DSCI+G+QHSAFLQQAS+ITGG+YLK QQL+GLFQ+L+ VFATDL SR FLQLP+P G
Sbjct: 194 PVDSCIVGSQHSAFLQQASHITGGIYLKPQQLEGLFQFLAMVFATDLHSRRFLQLPRPTG 253

Query: 470 VDFRASCFCHKKTIDMGYICSVCLSIFCKHHKTCSTCGSVFGQAPPEVTSTSDRKRK 300
           VDFRASCFCHKKTIDMGY+CSVCLSIFC+H K CSTC S F Q PP     S +KRK
Sbjct: 254 VDFRASCFCHKKTIDMGYVCSVCLSIFCEHSKKCSTCESTFNQKPP-----SGQKRK 305