BLASTX nr result
ID: Akebia26_contig00019004
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia26_contig00019004
(765 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003605589.1| Cytochrome b559 subunit alpha [Medicago trun... 117 6e-24
gb|AFK48829.1| unknown [Lotus japonicus] 97 2e-19
ref|XP_003606015.1| Cytochrome b559 subunit alpha [Medicago trun... 97 3e-18
ref|XP_003618686.1| Ribosomal protein S4 [Medicago truncatula] g... 98 4e-18
ref|XP_002888378.1| hypothetical protein ARALYDRAFT_894035 [Arab... 97 5e-18
ref|XP_004987318.1| PREDICTED: cytochrome b559 subunit alpha-lik... 94 2e-17
gb|EPS74274.1| hypothetical protein M569_00484, partial [Genlise... 91 2e-16
gb|AAL26213.1|AF313613_1 small ribosomal protein 4 [Austrobailey... 91 4e-16
ref|NP_904101.1| ribosomal protein S4 [Amborella trichopoda] gi|... 91 4e-16
gb|AEM44855.1| ribosomal protein S4 [Hernandia ovigera] 91 4e-16
gb|AEM44854.1| ribosomal protein S4 [Hedycarya arborea] 91 4e-16
gb|AEM44853.1| ribosomal protein S4 [Gyrocarpus sp. DES-2011] 91 4e-16
gb|ABN50316.1| small ribosomal protein 4 [Illicium verum] 91 4e-16
ref|YP_001294272.1| ribosomal protein S4 [Illicium oligandrum] g... 91 4e-16
gb|ABQ15095.1| ribosomal protein S4 [Kalanchoe daigremontiana] 91 6e-16
gb|AHE41694.1| ribosomal protein S4, partial (chloroplast) [Kala... 90 8e-16
gb|AHA13012.1| ribosomal protein S4 [Costus pulverulentus] 90 8e-16
ref|YP_008578175.1| ribosomal protein S4 (chloroplast) [Stockwel... 90 8e-16
ref|YP_008577750.1| ribosomal protein S4 (chloroplast) [Corymbia... 90 8e-16
ref|YP_008577665.1| ribosomal protein S4 (chloroplast) [Corymbia... 90 8e-16
>ref|XP_003605589.1| Cytochrome b559 subunit alpha [Medicago truncatula]
gi|355506644|gb|AES87786.1| Cytochrome b559 subunit
alpha [Medicago truncatula]
Length = 153
Score = 117 bits (292), Expect = 6e-24
Identities = 60/82 (73%), Positives = 65/82 (79%), Gaps = 5/82 (6%)
Frame = +2
Query: 479 SIKYCFDHSRWLAVHGLAIPTVSAMQFIQR*-----KPNPNYRAMTQSNPNEQNVELNRT 643
S++ + RWLAVHGLA+PTV Q+ KPNPNYRAMTQSNPNEQNVELNRT
Sbjct: 72 SLEQLDEFIRWLAVHGLAVPTVFFWDQYQQCSSSNDKPNPNYRAMTQSNPNEQNVELNRT 131
Query: 644 SLYWGLLLIFVLAVLFSNYFFN 709
SLYWGLLLIFVLAVLFSNYFFN
Sbjct: 132 SLYWGLLLIFVLAVLFSNYFFN 153
>gb|AFK48829.1| unknown [Lotus japonicus]
Length = 72
Score = 97.1 bits (240), Expect(3) = 2e-19
Identities = 45/46 (97%), Positives = 46/46 (100%)
Frame = +2
Query: 572 KPNPNYRAMTQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN 709
KPNPNYRAMTQSNPNEQ+VELNRTSLYWGLLLIFVLAVLFSNYFFN
Sbjct: 27 KPNPNYRAMTQSNPNEQSVELNRTSLYWGLLLIFVLAVLFSNYFFN 72
Score = 24.3 bits (51), Expect(3) = 2e-19
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +3
Query: 543 FQQCSSSNDK 572
+QQCSSSNDK
Sbjct: 18 YQQCSSSNDK 27
Score = 21.2 bits (43), Expect(3) = 2e-19
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +1
Query: 508 MVGCSRTSYTYCF 546
MV CSRTS T+ F
Sbjct: 1 MVSCSRTSGTHRF 13
>ref|XP_003606015.1| Cytochrome b559 subunit alpha [Medicago truncatula]
gi|355507070|gb|AES88212.1| Cytochrome b559 subunit
alpha [Medicago truncatula]
Length = 136
Score = 96.7 bits (239), Expect(2) = 3e-18
Identities = 45/46 (97%), Positives = 45/46 (97%)
Frame = +2
Query: 572 KPNPNYRAMTQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN 709
KPNPNYRA TQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN
Sbjct: 91 KPNPNYRATTQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN 136
Score = 21.9 bits (45), Expect(2) = 3e-18
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +3
Query: 534 YLLFQQCSSSNDK 572
++ + QCSSSNDK
Sbjct: 79 FIRWLQCSSSNDK 91
>ref|XP_003618686.1| Ribosomal protein S4 [Medicago truncatula]
gi|355493701|gb|AES74904.1| Ribosomal protein S4
[Medicago truncatula]
Length = 194
Score = 97.8 bits (242), Expect = 4e-18
Identities = 56/86 (65%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Frame = +3
Query: 252 LTSKRPRSGSDLRNQ*CSGKRSQRLIRLENK-KNCVFIMV*QSNNYLNTFA*LEKQEGST 428
LTSK P GS+L+NQ S K+SQ IRLE K KNCVFIMV Q++N LNTF LEK++
Sbjct: 67 LTSKGPTVGSELKNQSRSSKKSQYRIRLEEKTKNCVFIMVLQNDNCLNTFVSLEKRKVQP 126
Query: 429 SQVLLQLLEMRFDNILFRLSIASTIP 506
+ LLQLLEMR DNILFRL +ASTIP
Sbjct: 127 VKFLLQLLEMRLDNILFRLGMASTIP 152
>ref|XP_002888378.1| hypothetical protein ARALYDRAFT_894035 [Arabidopsis lyrata subsp.
lyrata] gi|297334219|gb|EFH64637.1| hypothetical protein
ARALYDRAFT_894035 [Arabidopsis lyrata subsp. lyrata]
Length = 136
Score = 97.4 bits (241), Expect = 5e-18
Identities = 50/68 (73%), Positives = 53/68 (77%)
Frame = +2
Query: 506 RWLAVHGLAIPTVSAMQFIQR*KPNPNYRAMTQSNPNEQNVELNRTSLYWGLLLIFVLAV 685
RWLAVHGLA+PTVS + AMTQSNPNEQ+VELNRTSLYWGLL IFVLAV
Sbjct: 81 RWLAVHGLAVPTVSFLG------------AMTQSNPNEQSVELNRTSLYWGLLFIFVLAV 128
Query: 686 LFSNYFFN 709
LFSNYFFN
Sbjct: 129 LFSNYFFN 136
>ref|XP_004987318.1| PREDICTED: cytochrome b559 subunit alpha-like [Setaria italica]
gi|514825361|ref|XP_004987334.1| PREDICTED: cytochrome
b559 subunit alpha-like [Setaria italica]
Length = 136
Score = 94.4 bits (233), Expect(2) = 2e-17
Identities = 44/46 (95%), Positives = 44/46 (95%)
Frame = +2
Query: 572 KPNPNYRAMTQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN 709
KPN NYR MTQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN
Sbjct: 91 KPNSNYRTMTQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN 136
Score = 21.9 bits (45), Expect(2) = 2e-17
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +3
Query: 534 YLLFQQCSSSNDK 572
++ + QCSSSNDK
Sbjct: 79 FMRWLQCSSSNDK 91
>gb|EPS74274.1| hypothetical protein M569_00484, partial [Genlisea aurea]
Length = 70
Score = 90.5 bits (223), Expect(2) = 2e-16
Identities = 42/43 (97%), Positives = 42/43 (97%)
Frame = +2
Query: 581 PNYRAMTQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN 709
PNYR MTQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN
Sbjct: 28 PNYRTMTQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN 70
Score = 21.9 bits (45), Expect(2) = 2e-16
Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 6/24 (25%)
Frame = +1
Query: 517 CSRTSYTYCF------SNAVHPTI 570
CS S TY SNAVHPTI
Sbjct: 1 CSWPSCTYRLFFGVNISNAVHPTI 24
>gb|AAL26213.1|AF313613_1 small ribosomal protein 4 [Austrobaileya scandens]
Length = 190
Score = 90.9 bits (224), Expect = 4e-16
Identities = 54/85 (63%), Positives = 57/85 (67%)
Frame = +3
Query: 252 LTSKRPRSGSDLRNQ*CSGKRSQRLIRLENKKNCVFIMV*QSNNYLNTFA*LEKQEGSTS 431
LTSKRPRSGSDLRNQ SGKRSQ IRLE K+ F L K +GST
Sbjct: 10 LTSKRPRSGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYGLTERQLLRYVRIAGKAKGSTG 69
Query: 432 QVLLQLLEMRFDNILFRLSIASTIP 506
QVLLQLLEMR DNILFRL +ASTIP
Sbjct: 70 QVLLQLLEMRLDNILFRLGMASTIP 94
>ref|NP_904101.1| ribosomal protein S4 [Amborella trichopoda]
gi|52783274|sp|Q70Y01.1|RR4_AMBTC RecName: Full=30S
ribosomal protein S4, chloroplastic
gi|34481631|emb|CAD45109.1| ribosomal protein S4
[Amborella trichopoda]
Length = 201
Score = 90.9 bits (224), Expect = 4e-16
Identities = 54/85 (63%), Positives = 57/85 (67%)
Frame = +3
Query: 252 LTSKRPRSGSDLRNQ*CSGKRSQRLIRLENKKNCVFIMV*QSNNYLNTFA*LEKQEGSTS 431
LTSKRPRSGSDLRNQ SGKRSQ IRLE K+ F L K +GST
Sbjct: 21 LTSKRPRSGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYGLTERQLLRYVRIAGKAKGSTG 80
Query: 432 QVLLQLLEMRFDNILFRLSIASTIP 506
QVLLQLLEMR DNILFRL +ASTIP
Sbjct: 81 QVLLQLLEMRLDNILFRLGMASTIP 105
>gb|AEM44855.1| ribosomal protein S4 [Hernandia ovigera]
Length = 181
Score = 90.9 bits (224), Expect = 4e-16
Identities = 54/85 (63%), Positives = 57/85 (67%)
Frame = +3
Query: 252 LTSKRPRSGSDLRNQ*CSGKRSQRLIRLENKKNCVFIMV*QSNNYLNTFA*LEKQEGSTS 431
LTSKRPRSGSDLRNQ SGKRSQ IRLE K+ F L K +GST
Sbjct: 2 LTSKRPRSGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYGLTERQLLRYVRIAGKAKGSTG 61
Query: 432 QVLLQLLEMRFDNILFRLSIASTIP 506
QVLLQLLEMR DNILFRL +ASTIP
Sbjct: 62 QVLLQLLEMRLDNILFRLGMASTIP 86
>gb|AEM44854.1| ribosomal protein S4 [Hedycarya arborea]
Length = 184
Score = 90.9 bits (224), Expect = 4e-16
Identities = 54/85 (63%), Positives = 57/85 (67%)
Frame = +3
Query: 252 LTSKRPRSGSDLRNQ*CSGKRSQRLIRLENKKNCVFIMV*QSNNYLNTFA*LEKQEGSTS 431
LTSKRPRSGSDLRNQ SGKRSQ IRLE K+ F L K +GST
Sbjct: 5 LTSKRPRSGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYGLTERQLLRYVRIAGKAKGSTG 64
Query: 432 QVLLQLLEMRFDNILFRLSIASTIP 506
QVLLQLLEMR DNILFRL +ASTIP
Sbjct: 65 QVLLQLLEMRLDNILFRLGMASTIP 89
>gb|AEM44853.1| ribosomal protein S4 [Gyrocarpus sp. DES-2011]
Length = 184
Score = 90.9 bits (224), Expect = 4e-16
Identities = 54/85 (63%), Positives = 57/85 (67%)
Frame = +3
Query: 252 LTSKRPRSGSDLRNQ*CSGKRSQRLIRLENKKNCVFIMV*QSNNYLNTFA*LEKQEGSTS 431
LTSKRPRSGSDLRNQ SGKRSQ IRLE K+ F L K +GST
Sbjct: 5 LTSKRPRSGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYGLTERQLLRYVRIAGKAKGSTG 64
Query: 432 QVLLQLLEMRFDNILFRLSIASTIP 506
QVLLQLLEMR DNILFRL +ASTIP
Sbjct: 65 QVLLQLLEMRLDNILFRLGMASTIP 89
>gb|ABN50316.1| small ribosomal protein 4 [Illicium verum]
Length = 203
Score = 90.9 bits (224), Expect = 4e-16
Identities = 54/85 (63%), Positives = 57/85 (67%)
Frame = +3
Query: 252 LTSKRPRSGSDLRNQ*CSGKRSQRLIRLENKKNCVFIMV*QSNNYLNTFA*LEKQEGSTS 431
LTSKRPRSGSDLRNQ SGKRSQ IRLE K+ F L K +GST
Sbjct: 21 LTSKRPRSGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYGLTERQLLRYVRIAGKAKGSTG 80
Query: 432 QVLLQLLEMRFDNILFRLSIASTIP 506
QVLLQLLEMR DNILFRL +ASTIP
Sbjct: 81 QVLLQLLEMRLDNILFRLGMASTIP 105
>ref|YP_001294272.1| ribosomal protein S4 [Illicium oligandrum]
gi|172048705|sp|A6MMU6.1|RR4_ILLOL RecName: Full=30S
ribosomal protein S4, chloroplastic
gi|147917397|gb|ABQ52521.1| ribosomal protein S4
[Illicium oligandrum]
Length = 203
Score = 90.9 bits (224), Expect = 4e-16
Identities = 54/85 (63%), Positives = 57/85 (67%)
Frame = +3
Query: 252 LTSKRPRSGSDLRNQ*CSGKRSQRLIRLENKKNCVFIMV*QSNNYLNTFA*LEKQEGSTS 431
LTSKRPRSGSDLRNQ SGKRSQ IRLE K+ F L K +GST
Sbjct: 21 LTSKRPRSGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYGLTERQLLRYVRIAGKAKGSTG 80
Query: 432 QVLLQLLEMRFDNILFRLSIASTIP 506
QVLLQLLEMR DNILFRL +ASTIP
Sbjct: 81 QVLLQLLEMRLDNILFRLGMASTIP 105
>gb|ABQ15095.1| ribosomal protein S4 [Kalanchoe daigremontiana]
Length = 186
Score = 90.5 bits (223), Expect = 6e-16
Identities = 54/85 (63%), Positives = 57/85 (67%)
Frame = +3
Query: 252 LTSKRPRSGSDLRNQ*CSGKRSQRLIRLENKKNCVFIMV*QSNNYLNTFA*LEKQEGSTS 431
LTSKRPR GSDLRNQ SGKRSQ IRLE K+ F L K +GST
Sbjct: 6 LTSKRPRVGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTG 65
Query: 432 QVLLQLLEMRFDNILFRLSIASTIP 506
QVLLQLLEMR DNILFRLS+ASTIP
Sbjct: 66 QVLLQLLEMRLDNILFRLSLASTIP 90
>gb|AHE41694.1| ribosomal protein S4, partial (chloroplast) [Kalanchoe laciniata]
Length = 181
Score = 90.1 bits (222), Expect = 8e-16
Identities = 54/85 (63%), Positives = 57/85 (67%)
Frame = +3
Query: 252 LTSKRPRSGSDLRNQ*CSGKRSQRLIRLENKKNCVFIMV*QSNNYLNTFA*LEKQEGSTS 431
LTSKRPR GSDLRNQ SGKRSQ IRLE K+ F L K +GST
Sbjct: 18 LTSKRPRVGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTG 77
Query: 432 QVLLQLLEMRFDNILFRLSIASTIP 506
QVLLQLLEMR DNILFRLS+ASTIP
Sbjct: 78 QVLLQLLEMRLDNILFRLSMASTIP 102
>gb|AHA13012.1| ribosomal protein S4 [Costus pulverulentus]
Length = 201
Score = 90.1 bits (222), Expect = 8e-16
Identities = 53/85 (62%), Positives = 57/85 (67%)
Frame = +3
Query: 252 LTSKRPRSGSDLRNQ*CSGKRSQRLIRLENKKNCVFIMV*QSNNYLNTFA*LEKQEGSTS 431
LTSKRPRSGSDL+NQ SGKRSQ IRLE K+ F L K +GST
Sbjct: 21 LTSKRPRSGSDLKNQLHSGKRSQYRIRLEEKQKLRFHYGLTERQLLRYVHIARKAKGSTG 80
Query: 432 QVLLQLLEMRFDNILFRLSIASTIP 506
QVLLQLLEMR DNILFRL +ASTIP
Sbjct: 81 QVLLQLLEMRLDNILFRLGMASTIP 105
>ref|YP_008578175.1| ribosomal protein S4 (chloroplast) [Stockwellia quadrifida]
gi|442569423|gb|AGC59584.1| ribosomal protein S4
(chloroplast) [Stockwellia quadrifida]
Length = 201
Score = 90.1 bits (222), Expect = 8e-16
Identities = 54/101 (53%), Positives = 62/101 (61%)
Frame = +3
Query: 252 LTSKRPRSGSDLRNQ*CSGKRSQRLIRLENKKNCVFIMV*QSNNYLNTFA*LEKQEGSTS 431
LTSKRPR+GSDLRNQ SGK+SQ IRLE K+ F L K +GST
Sbjct: 21 LTSKRPRAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTG 80
Query: 432 QVLLQLLEMRFDNILFRLSIASTIPDGWLFTD*LYLLFQQC 554
QVLLQLLEMR DNILFRL +ASTIP + ++L C
Sbjct: 81 QVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGC 121
>ref|YP_008577750.1| ribosomal protein S4 (chloroplast) [Corymbia eximia]
gi|545718999|ref|YP_008577835.1| ribosomal protein S4
(chloroplast) [Corymbia tessellaris]
gi|545719085|ref|YP_008577920.1| ribosomal protein S4
(chloroplast) [Angophora floribunda]
gi|545719171|ref|YP_008578005.1| ribosomal protein S4
(chloroplast) [Angophora costata]
gi|442568993|gb|AGC59159.1| ribosomal protein S4
(chloroplast) [Corymbia eximia]
gi|442569079|gb|AGC59244.1| ribosomal protein S4
(chloroplast) [Corymbia tessellaris]
gi|442569165|gb|AGC59329.1| ribosomal protein S4
(chloroplast) [Angophora floribunda]
gi|442569251|gb|AGC59414.1| ribosomal protein S4
(chloroplast) [Angophora costata]
Length = 201
Score = 90.1 bits (222), Expect = 8e-16
Identities = 54/101 (53%), Positives = 62/101 (61%)
Frame = +3
Query: 252 LTSKRPRSGSDLRNQ*CSGKRSQRLIRLENKKNCVFIMV*QSNNYLNTFA*LEKQEGSTS 431
LTSKRPR+GSDLRNQ SGK+SQ IRLE K+ F L K +GST
Sbjct: 21 LTSKRPRAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTG 80
Query: 432 QVLLQLLEMRFDNILFRLSIASTIPDGWLFTD*LYLLFQQC 554
QVLLQLLEMR DNILFRL +ASTIP + ++L C
Sbjct: 81 QVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGC 121
>ref|YP_008577665.1| ribosomal protein S4 (chloroplast) [Corymbia maculata]
gi|442568907|gb|AGC59074.1| ribosomal protein S4
(chloroplast) [Corymbia maculata]
Length = 201
Score = 90.1 bits (222), Expect = 8e-16
Identities = 54/101 (53%), Positives = 62/101 (61%)
Frame = +3
Query: 252 LTSKRPRSGSDLRNQ*CSGKRSQRLIRLENKKNCVFIMV*QSNNYLNTFA*LEKQEGSTS 431
LTSKRPR+GSDLRNQ SGK+SQ IRLE K+ F L K +GST
Sbjct: 21 LTSKRPRAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTG 80
Query: 432 QVLLQLLEMRFDNILFRLSIASTIPDGWLFTD*LYLLFQQC 554
QVLLQLLEMR DNILFRL +ASTIP + ++L C
Sbjct: 81 QVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGC 121