BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia26_contig00016393
         (947 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containi...   326   9e-87
ref|XP_002308709.2| hypothetical protein POPTR_0006s28060g [Popu...   314   3e-83
ref|XP_007011706.1| Pentatricopeptide repeat-containing protein,...   306   6e-81
ref|XP_006483487.1| PREDICTED: pentatricopeptide repeat-containi...   299   9e-79
ref|XP_002515418.1| pentatricopeptide repeat-containing protein,...   288   2e-75
ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containi...   287   4e-75
ref|XP_004237112.1| PREDICTED: pentatricopeptide repeat-containi...   286   8e-75
ref|XP_006845376.1| hypothetical protein AMTR_s00019p00039970 [A...   281   2e-73
ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   281   3e-73
ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containi...   281   3e-73
ref|XP_006350217.1| PREDICTED: pentatricopeptide repeat-containi...   280   5e-73
gb|EXB86664.1| hypothetical protein L484_013194 [Morus notabilis]     280   8e-73
ref|XP_007136936.1| hypothetical protein PHAVU_009G086500g [Phas...   278   3e-72
ref|XP_004293246.1| PREDICTED: pentatricopeptide repeat-containi...   263   8e-68
ref|XP_004501390.1| PREDICTED: pentatricopeptide repeat-containi...   257   5e-66
ref|XP_003603286.1| Pentatricopeptide repeat-containing protein ...   251   2e-64
ref|XP_006412544.1| hypothetical protein EUTSA_v10024264mg [Eutr...   245   2e-62
ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arab...   244   5e-62
ref|XP_006282792.1| hypothetical protein CARUB_v10006400mg [Caps...   243   8e-62
ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thali...   240   5e-61

>ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic [Vitis vinifera]
           gi|296082142|emb|CBI21147.3| unnamed protein product
           [Vitis vinifera]
          Length = 1113

 Score =  326 bits (835), Expect = 9e-87
 Identities = 174/268 (64%), Positives = 209/268 (77%), Gaps = 3/268 (1%)
 Frame = -1

Query: 797 VMELCFSMICTTNVK--CSVPTDCKPTVLSNYGSTRRIKTGNLKVLTYGFLENWKKHGKK 624
           V+ L  S  C +  K  C+V T  KP+VLS   S   IK GNLKVL  G   NWKKH KK
Sbjct: 3   VIILSSSSSCCSKFKYGCAV-TGTKPSVLSCNESLGGIKIGNLKVLPSGCRVNWKKHRKK 61

Query: 623 NVGFCGFVMKSSFERVV-KGKTKNGLSSDEVIETLKSITDPIEALSFFQSVARQPNIVHT 447
            VG CGFV++SSF+ VV K K ++ +SS+EV   LKSI+DP +A SFF SVA  P ++HT
Sbjct: 62  QVGVCGFVIRSSFDVVVVKRKPESTMSSEEVYRVLKSISDPNQAFSFFNSVAEMPRVIHT 121

Query: 446 TESCNYMLELLRGQRRVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALE 267
           TE+CNY+LE+LR  RRVE+M VVF+LMQKQIIKR++ TYL IFK L + GG+R+AP+ALE
Sbjct: 122 TETCNYVLEMLRAHRRVEDMVVVFNLMQKQIIKRSINTYLTIFKVLYIRGGLREAPVALE 181

Query: 266 NMRRAGFVLNAFSYNGLIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKIR 87
            MR+ GFVLN +SY GLIHLLL+SGF  +A++VYRRMVSEGIKPSLKTYSALMVA GK R
Sbjct: 182 KMRKVGFVLNGYSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRR 241

Query: 86  DAETVMGLLEEMQSLGLRPNVYTFTICI 3
           D ETVMGLL+EM+SLGLRPN+YTFTICI
Sbjct: 242 DIETVMGLLQEMESLGLRPNIYTFTICI 269



 Score = 60.5 bits (145), Expect = 1e-06
 Identities = 46/163 (28%), Positives = 80/163 (49%), Gaps = 4/163 (2%)
 Frame = -1

Query: 587  FERVVKGKTKNGLSSDEV-IETLKSITDPIEALSFFQSV---ARQPNIVHTTESCNYMLE 420
            F R+VK   +  L S  + ++ L  +    +AL +F+ +      P++V      N M+ 
Sbjct: 951  FRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLV----CYNLMIN 1006

Query: 419  LLRGQRRVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVL 240
             L   +RVEE   +FD M+ + I  ++ TY  +   L + G + +A    E ++  G   
Sbjct: 1007 GLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEP 1066

Query: 239  NAFSYNGLIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSAL 111
            N F+YN LI     SG   +A  VY++M+  G +P+  T++ L
Sbjct: 1067 NVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTFAQL 1109



 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 42/144 (29%), Positives = 73/144 (50%)
 Frame = -1

Query: 434  NYMLELLRGQRRVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRR 255
            N ++     Q  VE    +F  M K+ I+ ++++Y I+   L + G +  A    E ++ 
Sbjct: 932  NILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKL 991

Query: 254  AGFVLNAFSYNGLIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDAET 75
            +G   +   YN +I+ L +S    +A+ ++  M + GI P L TY+AL++  G     E 
Sbjct: 992  SGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEE 1051

Query: 74   VMGLLEEMQSLGLRPNVYTFTICI 3
               + EE+Q  GL PNV+T+   I
Sbjct: 1052 AGKMYEELQLKGLEPNVFTYNALI 1075


>ref|XP_002308709.2| hypothetical protein POPTR_0006s28060g [Populus trichocarpa]
           gi|550337245|gb|EEE92232.2| hypothetical protein
           POPTR_0006s28060g [Populus trichocarpa]
          Length = 1115

 Score =  314 bits (805), Expect = 3e-83
 Identities = 159/236 (67%), Positives = 190/236 (80%), Gaps = 1/236 (0%)
 Frame = -1

Query: 707 GSTRRIKTGNLKVLTYGFLENWKKHGKKNVGFCGFVMKSSFER-VVKGKTKNGLSSDEVI 531
           GS    K G L+V  +G   NWKK+ KK V FCGF +KS  E  VV GK + G SSDEV+
Sbjct: 36  GSLGGEKFGTLRVFPFGSNVNWKKNNKKQVAFCGFALKSQNEELVVNGKPRKGSSSDEVL 95

Query: 530 ETLKSITDPIEALSFFQSVARQPNIVHTTESCNYMLELLRGQRRVEEMAVVFDLMQKQII 351
             L SI+DPI AL +F+SV   PN+VHTTE+CN+MLE+LR  RRVE+MA VFDLMQ+ II
Sbjct: 96  GVLHSISDPIHALFYFKSVGELPNVVHTTETCNHMLEILRVHRRVEDMAFVFDLMQRHII 155

Query: 350 KRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNGLIHLLLQSGFRGQAME 171
           +RN++TYLIIFK L + GG+RQAP ALE MR AGFVLNA+SYNGLIH LLQSGF  +A+E
Sbjct: 156 RRNVDTYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALE 215

Query: 170 VYRRMVSEGIKPSLKTYSALMVASGKIRDAETVMGLLEEMQSLGLRPNVYTFTICI 3
           VYRRMVSEG+KPSLKT+SALMVASGK R+ +TVMGLLEEM+S+GLRPN+YT+TICI
Sbjct: 216 VYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICI 271



 Score = 65.5 bits (158), Expect = 3e-08
 Identities = 39/132 (29%), Positives = 73/132 (55%)
 Frame = -1

Query: 398  VEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNG 219
            V+     F  M K+ I+ ++++Y I+   L + G +  A    E +++AG   +  +YN 
Sbjct: 946  VDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNL 1005

Query: 218  LIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDAETVMGLLEEMQSLG 39
            +I+ L +S    +A+ ++  M + GI P L TY++L++  G +   E    + EE+Q +G
Sbjct: 1006 MINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIG 1065

Query: 38   LRPNVYTFTICI 3
            L+PNV+T+   I
Sbjct: 1066 LKPNVFTYNALI 1077



 Score = 57.8 bits (138), Expect = 6e-06
 Identities = 44/160 (27%), Positives = 77/160 (48%), Gaps = 1/160 (0%)
 Frame = -1

Query: 587  FERVVKGKTKNGLSSDEVIETLKSITDPIE-ALSFFQSVARQPNIVHTTESCNYMLELLR 411
            F+R+VK   +  L S  ++  +  I   ++ AL +F+ + +Q  +     + N M+  L 
Sbjct: 953  FKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKL-KQAGLDPDLVAYNLMINGLG 1011

Query: 410  GQRRVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAF 231
              +R EE   +F  MQ + I  ++ TY  +   L + G I +A    E ++  G   N F
Sbjct: 1012 RSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVF 1071

Query: 230  SYNGLIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSAL 111
            +YN LI     SG    A  +Y++M+  G  P+  T++ L
Sbjct: 1072 TYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTFAQL 1111


>ref|XP_007011706.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
           cacao] gi|508782069|gb|EOY29325.1| Pentatricopeptide
           repeat-containing protein, putative [Theobroma cacao]
          Length = 1112

 Score =  306 bits (785), Expect = 6e-81
 Identities = 164/268 (61%), Positives = 201/268 (75%), Gaps = 3/268 (1%)
 Frame = -1

Query: 797 VMELCFSMICTTNVKCS-VPTDCKPTVLSN-YGSTRRIKTGNLKVLTYGFLENWKKHGKK 624
           V+ LC    C  ++  S +  D K +  S+ Y S    K GNL+V  YG + +WKK  K+
Sbjct: 3   VLILCSMTACCNSLSYSCILADSKVSAFSHKYVSFGGRKNGNLEVWPYGCMVSWKKRRKQ 62

Query: 623 NVGFCGFVMKSSFERVV-KGKTKNGLSSDEVIETLKSITDPIEALSFFQSVARQPNIVHT 447
            +GF  +VMK+S + VV  GK KN LSS+EV+  LKS TD   ALS+F+SVA  PN+VHT
Sbjct: 63  RLGF--YVMKNSCQMVVANGKCKNSLSSEEVLRVLKSFTDTKSALSYFKSVAELPNVVHT 120

Query: 446 TESCNYMLELLRGQRRVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALE 267
           TE+CN+MLE+LR  R V  M+ VF+ MQKQIIKR++ TYL +FKGL + GG+RQAP  LE
Sbjct: 121 TETCNHMLEVLRAHRMVGAMSFVFEFMQKQIIKRDLNTYLTVFKGLDIRGGLRQAPFGLE 180

Query: 266 NMRRAGFVLNAFSYNGLIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKIR 87
            MR AGFVLNA+SYNGLIHLLLQSGF  +A+EVYRRMVSEG+KPSLKTYSALMVASGK R
Sbjct: 181 RMRNAGFVLNAYSYNGLIHLLLQSGFSREALEVYRRMVSEGLKPSLKTYSALMVASGKRR 240

Query: 86  DAETVMGLLEEMQSLGLRPNVYTFTICI 3
           D  TVM LLEEM++LGL+PN+YTFTICI
Sbjct: 241 DIGTVMDLLEEMETLGLKPNIYTFTICI 268



 Score = 68.9 bits (167), Expect = 3e-09
 Identities = 42/132 (31%), Positives = 71/132 (53%)
 Frame = -1

Query: 398  VEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNG 219
            V+    +F  M K+ I+ ++++Y I+   L + G +  A    E ++  G   +  SYN 
Sbjct: 943  VDAACELFKRMVKEGIRPDLKSYTILVDCLCLVGRVDDAMHYFEELKLTGLDPDLVSYNL 1002

Query: 218  LIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDAETVMGLLEEMQSLG 39
            +I+ L +SG   +A+ ++  M S GI P L TY++L++  G +   E      EE+Q +G
Sbjct: 1003 MINGLGRSGRVEEALSLFDEMWSRGISPDLYTYNSLILNLGTVGMVEQAGKFYEELQLMG 1062

Query: 38   LRPNVYTFTICI 3
            L PNVYT+   I
Sbjct: 1063 LEPNVYTYNALI 1074


>ref|XP_006483487.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Citrus sinensis]
          Length = 1107

 Score =  299 bits (766), Expect = 9e-79
 Identities = 157/238 (65%), Positives = 185/238 (77%), Gaps = 1/238 (0%)
 Frame = -1

Query: 713 NYGSTRRIKTGNLKVLTYGFLENWKKHGKKNVGFCGFVMKSSFERVV-KGKTKNGLSSDE 537
           N GS   +K GNLKV       NWKKH KK VGFCG+VMKSS E VV KGK +NGL+S+E
Sbjct: 33  NNGSVGGLKVGNLKV-------NWKKHWKKQVGFCGYVMKSSNEVVVVKGKPRNGLTSEE 85

Query: 536 VIETLKSITDPIEALSFFQSVARQPNIVHTTESCNYMLELLRGQRRVEEMAVVFDLMQKQ 357
           VI  L+S +D     S+F+SVA  P +VHTTE+CNYMLE+LR   RV +M VVFDLMQKQ
Sbjct: 86  VIRVLRSFSDLDSTYSYFKSVAELPYVVHTTETCNYMLEVLRVYGRVTDMVVVFDLMQKQ 145

Query: 356 IIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNGLIHLLLQSGFRGQA 177
           II R++ TYL IFK L + GG+R+A  ALE MR AGFVLNA+SYNG IH +LQSGF  +A
Sbjct: 146 IINRDLSTYLTIFKALSLKGGLRRASFALEKMRAAGFVLNAYSYNGFIHFILQSGFCREA 205

Query: 176 MEVYRRMVSEGIKPSLKTYSALMVASGKIRDAETVMGLLEEMQSLGLRPNVYTFTICI 3
           + VY+R+VSEGIKPSLKTYSALMVA+GK R+ +TVM LLEEM+ LGLRPNVYTFTICI
Sbjct: 206 LAVYKRVVSEGIKPSLKTYSALMVAAGKRRNIKTVMNLLEEMERLGLRPNVYTFTICI 263



 Score = 67.0 bits (162), Expect = 1e-08
 Identities = 40/132 (30%), Positives = 70/132 (53%)
 Frame = -1

Query: 398  VEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNG 219
            VE    +F  M K  I+ ++++Y ++   L + G +  A    E ++  G   +  SYN 
Sbjct: 938  VETACELFKQMIKGGIRPDLKSYSVLVDCLCMVGRVDDALHYFEELKLNGLDADTISYNF 997

Query: 218  LIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDAETVMGLLEEMQSLG 39
            +I+ L +SG   +A+ ++  M   GI P L TY++L++  G+    E    L E++Q +G
Sbjct: 998  MINGLGRSGRIEEALSLFDEMKKRGISPDLYTYNSLILNLGRAGMVEEARKLYEQLQEMG 1057

Query: 38   LRPNVYTFTICI 3
            L PNV+T+   I
Sbjct: 1058 LEPNVFTYNALI 1069



 Score = 61.6 bits (148), Expect = 4e-07
 Identities = 46/160 (28%), Positives = 79/160 (49%), Gaps = 1/160 (0%)
 Frame = -1

Query: 587  FERVVKGKTKNGLSSDEV-IETLKSITDPIEALSFFQSVARQPNIVHTTESCNYMLELLR 411
            F++++KG  +  L S  V ++ L  +    +AL +F+ + +   +   T S N+M+  L 
Sbjct: 945  FKQMIKGGIRPDLKSYSVLVDCLCMVGRVDDALHYFEEL-KLNGLDADTISYNFMINGLG 1003

Query: 410  GQRRVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAF 231
               R+EE   +FD M+K+ I  ++ TY  +   L   G + +A    E ++  G   N F
Sbjct: 1004 RSGRIEEALSLFDEMKKRGISPDLYTYNSLILNLGRAGMVEEARKLYEQLQEMGLEPNVF 1063

Query: 230  SYNGLIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSAL 111
            +YN LI     SG    A  VY +M+  G  P+  T++ L
Sbjct: 1064 TYNALIRGYGTSGNPDSAYAVYEKMMVGGCSPNPGTFAQL 1103



 Score = 61.2 bits (147), Expect = 6e-07
 Identities = 40/144 (27%), Positives = 72/144 (50%)
 Frame = -1

Query: 434  NYMLELLRGQRRVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRR 255
            N +L+      RVEE+  +++ M  +  K N  ++ I+  GL     I +A     N+  
Sbjct: 821  NLLLDGYGKSGRVEELLKLYEEMSFRGCKPNTISHNIVISGLVKSNSIDKAMDLFYNLVS 880

Query: 254  AGFVLNAFSYNGLIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDAET 75
             GF     +Y  LI  L +SG   +A +++  M+  G KP+   Y+ L+   GK  D ET
Sbjct: 881  GGFSPTPCTYGPLIDGLSKSGRLEEAKKLFEEMLDYGCKPNCVIYNILINGFGKTGDVET 940

Query: 74   VMGLLEEMQSLGLRPNVYTFTICI 3
               L ++M   G+RP++ ++++ +
Sbjct: 941  ACELFKQMIKGGIRPDLKSYSVLV 964



 Score = 58.5 bits (140), Expect = 4e-06
 Identities = 49/190 (25%), Positives = 79/190 (41%), Gaps = 5/190 (2%)
 Frame = -1

Query: 557  NGLSSDE--VIETLKSITDPIEALS---FFQSVARQPNIVHTTESCNYMLELLRGQRRVE 393
            NG+  D+  V+  +K      +AL+    F        +  T E  NY++  L      E
Sbjct: 740  NGICRDDSVVVPIIKLFCRQKKALAAKDLFVKFTENLGVTSTLEMYNYLIHGLLEVHATE 799

Query: 392  EMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNGLI 213
                +F  M+      ++ TY ++  G    G + +     E M   G   N  S+N +I
Sbjct: 800  MGLDLFTTMKNAGCAPDISTYNLLLDGYGKSGRVEELLKLYEEMSFRGCKPNTISHNIVI 859

Query: 212  HLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDAETVMGLLEEMQSLGLR 33
              L++S    +AM+++  +VS G  P+  TY  L+    K    E    L EEM   G +
Sbjct: 860  SGLVKSNSIDKAMDLFYNLVSGGFSPTPCTYGPLIDGLSKSGRLEEAKKLFEEMLDYGCK 919

Query: 32   PNVYTFTICI 3
            PN   + I I
Sbjct: 920  PNCVIYNILI 929


>ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545362|gb|EEF46867.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1113

 Score =  288 bits (738), Expect = 2e-75
 Identities = 150/243 (61%), Positives = 182/243 (74%), Gaps = 1/243 (0%)
 Frame = -1

Query: 728 PTVLSNYGSTRRIKTGNLKVLTYGFLENWKKHGKKNVGFCGFVMKSSFERVV-KGKTKNG 552
           P  + N G ++  +  NL  LT G L  W+KH ++ VGF G  +KSS   VV K K KN 
Sbjct: 29  PAFIHNNGISKGRRVRNLNFLTCGSLSIWEKHKERQVGFGGVAVKSSHGLVVAKRKPKNA 88

Query: 551 LSSDEVIETLKSITDPIEALSFFQSVARQPNIVHTTESCNYMLELLRGQRRVEEMAVVFD 372
           LSS EV+  L SI DP +A S+F SVA  P +VHTTE+CN+MLE+LR  RRV +M VVF+
Sbjct: 89  LSSKEVMAVLNSILDPTDAFSYFNSVAEMPFVVHTTETCNHMLEILRIHRRVGDMVVVFN 148

Query: 371 LMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNGLIHLLLQSG 192
           LMQ QIIKR++ TYLIIFKGL + GG+RQ P A   MR AGF LNA+SYNGLIHLLLQSG
Sbjct: 149 LMQNQIIKRDLNTYLIIFKGLFIRGGLRQTPFAFGKMREAGFHLNAYSYNGLIHLLLQSG 208

Query: 191 FRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDAETVMGLLEEMQSLGLRPNVYTFT 12
              +A+E+YRRMV EG+KPSLKT+SALMVA+GK RD ETV  LLEEM+SLGL+PN+YT+T
Sbjct: 209 LCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYT 268

Query: 11  ICI 3
           ICI
Sbjct: 269 ICI 271



 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 39/126 (30%), Positives = 68/126 (53%)
 Frame = -1

Query: 380  VFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNGLIHLLL 201
            +F  M ++ I+ ++++Y  +   L   G +  A    E +++ G  L++ +YN +I  L 
Sbjct: 952  LFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLG 1011

Query: 200  QSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDAETVMGLLEEMQSLGLRPNVY 21
            +S    +A+ +Y  M S GI P L TY++L++  G     E    L EE+Q +GL PNV+
Sbjct: 1012 RSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVF 1071

Query: 20   TFTICI 3
            T+   I
Sbjct: 1072 TYNALI 1077



 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 40/130 (30%), Positives = 66/130 (50%)
 Frame = -1

Query: 500  EALSFFQSVARQPNIVHTTESCNYMLELLRGQRRVEEMAVVFDLMQKQIIKRNMETYLII 321
            +AL +F+ + +Q  +   + + N M++ L    R+EE   ++D MQ + I  ++ TY  +
Sbjct: 983  DALHYFEKL-KQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSL 1041

Query: 320  FKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNGLIHLLLQSGFRGQAMEVYRRMVSEGI 141
               L V G + QA    E ++  G   N F+YN LI     SG    A  VY+RM+  G 
Sbjct: 1042 ILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGC 1101

Query: 140  KPSLKTYSAL 111
             P+  T++ L
Sbjct: 1102 SPNTGTFAQL 1111


>ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Glycine max]
          Length = 1113

 Score =  287 bits (735), Expect = 4e-75
 Identities = 152/267 (56%), Positives = 193/267 (72%), Gaps = 2/267 (0%)
 Frame = -1

Query: 797 VMELCFSMICTTNVK-CSVPTDCKPTVLSNYGSTRRIKTGNLKVLTYGFLENWKKHGKKN 621
           V+ LC S IC++++  C   +     V+SN G         +K    G    WKKHGK+ 
Sbjct: 3   VLVLCSSTICSSSLSSCCAFSGTNVYVMSNNGFFGETPFFKMKSFPNGSSVIWKKHGKRQ 62

Query: 620 VGFCGFVMKSSFERVV-KGKTKNGLSSDEVIETLKSITDPIEALSFFQSVARQPNIVHTT 444
           +G   F  + + E VV  GK+K+ +SS+EVI  LKSI+DP  ALS+F+ V++ PNIVHT 
Sbjct: 63  LGLRVFETRCAHEVVVVNGKSKSSVSSEEVIGALKSISDPNSALSYFKMVSQLPNIVHTP 122

Query: 443 ESCNYMLELLRGQRRVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALEN 264
           E+CNYMLE LR   RVE+MA VFDLMQKQ+I RN  TYL IFK L + GGIRQAP AL  
Sbjct: 123 ETCNYMLEFLRVHGRVEDMAFVFDLMQKQVINRNPNTYLTIFKALSIKGGIRQAPFALGK 182

Query: 263 MRRAGFVLNAFSYNGLIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRD 84
           MR+AGFVLNA+SYNGLI+ LLQ GF  +A++VY+RM+SEG+KPS+KTYSALMVA G+ RD
Sbjct: 183 MRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRRD 242

Query: 83  AETVMGLLEEMQSLGLRPNVYTFTICI 3
             T+M LLEEM++LGLRPN+YT+TICI
Sbjct: 243 TGTIMDLLEEMETLGLRPNIYTYTICI 269



 Score = 65.1 bits (157), Expect = 4e-08
 Identities = 40/142 (28%), Positives = 75/142 (52%), Gaps = 3/142 (2%)
 Frame = -1

Query: 419  LLRGQRRVEEMAVVFDLMQKQI---IKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAG 249
            L+ G  +   + +  DL ++ I   I+ ++++Y I+ + L + G +  A    E ++  G
Sbjct: 934  LINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTG 993

Query: 248  FVLNAFSYNGLIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDAETVM 69
               +  SYN +I+ L +S    +A+ ++  M + GI P L TY+AL++  G     +   
Sbjct: 994  LDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAG 1053

Query: 68   GLLEEMQSLGLRPNVYTFTICI 3
             + EE+Q +GL PNV+T+   I
Sbjct: 1054 KMFEELQFMGLEPNVFTYNALI 1075



 Score = 62.0 bits (149), Expect = 3e-07
 Identities = 45/139 (32%), Positives = 68/139 (48%), Gaps = 3/139 (2%)
 Frame = -1

Query: 410 GQRRVEEMAVVFDLMQKQI---IKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVL 240
           G+RR  +   + DL+++     ++ N+ TY I  + L   G I  A   L+ M   G   
Sbjct: 238 GRRR--DTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGP 295

Query: 239 NAFSYNGLIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDAETVMGLL 60
           +  +Y  LI  L  +G   +A E+Y +M +   KP L TY  LM   G   D ETV    
Sbjct: 296 DVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFW 355

Query: 59  EEMQSLGLRPNVYTFTICI 3
            EM++ G  P+V T+TI +
Sbjct: 356 SEMEADGYAPDVVTYTILV 374


>ref|XP_004237112.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Solanum lycopersicum]
          Length = 1131

 Score =  286 bits (732), Expect = 8e-75
 Identities = 156/286 (54%), Positives = 197/286 (68%), Gaps = 21/286 (7%)
 Frame = -1

Query: 797 VMELCFSMICTTNVKCSVPTDCKPTVLSN------------YGSTRRIK--------TGN 678
           V+ L  S IC  N  C   T+ + +   N             GS+R +          GN
Sbjct: 3   VIVLSSSAICCNNFNCVSVTETRQSTGGNGWLNCDKIRKKHVGSSRFVMKCSNDVVLAGN 62

Query: 677 LKVLTYGFLENWKKHGKKNVGFCGFVMKSSFERV-VKGKTKNGLSSDEVIETLKSITDPI 501
           L     G + N     KK+VG   F MK S + V V GK +NG+S++ V+  L+SI++P 
Sbjct: 63  LNFFPGGSVVNCDTIRKKHVGSSRFFMKCSSDVVLVNGKPRNGISAEGVLRNLRSISEPT 122

Query: 500 EALSFFQSVARQPNIVHTTESCNYMLELLRGQRRVEEMAVVFDLMQKQIIKRNMETYLII 321
           EAL+ F+SVA  P +VHTT++CNYMLE LR   R+ +MAVVFDLMQKQII R+++TYLII
Sbjct: 123 EALALFKSVAEMPRVVHTTKTCNYMLEFLRVLERINDMAVVFDLMQKQIIYRSLDTYLII 182

Query: 320 FKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNGLIHLLLQSGFRGQAMEVYRRMVSEGI 141
           FKGL + GGIR+AP ALE M++AGFVLNA+SYNGLIHL+LQ+GF  +A++VYRRM+SE +
Sbjct: 183 FKGLHIRGGIREAPFALERMKKAGFVLNAYSYNGLIHLILQAGFWQEALKVYRRMISEKL 242

Query: 140 KPSLKTYSALMVASGKIRDAETVMGLLEEMQSLGLRPNVYTFTICI 3
           KPSLKTYSALMVA GK RD ETVM LL EM+ LGLRPN+YTFTICI
Sbjct: 243 KPSLKTYSALMVACGKRRDTETVMRLLSEMEGLGLRPNIYTFTICI 288



 Score = 65.1 bits (157), Expect = 4e-08
 Identities = 41/126 (32%), Positives = 68/126 (53%)
 Frame = -1

Query: 380  VFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNGLIHLLL 201
            +F+ M K+ I+ +++TY I+   L     +  A    E ++ AG   +  SYN +I+ L 
Sbjct: 970  LFNRMNKEGIRPDLKTYTILVDCLCSARKVDDALHYFEELKSAGLDPDLISYNLMINGLG 1029

Query: 200  QSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDAETVMGLLEEMQSLGLRPNVY 21
            +SG   +A+ +   M S GI P+L TY+ L+   G +   E    + EE+Q LGL P+V+
Sbjct: 1030 KSGKMKEALHLLDEMKSRGITPNLYTYNTLIFNLGIVGMLEEAGRMYEELQQLGLEPDVF 1089

Query: 20   TFTICI 3
            T+   I
Sbjct: 1090 TYNALI 1095



 Score = 58.5 bits (140), Expect = 4e-06
 Identities = 36/138 (26%), Positives = 69/138 (50%)
 Frame = -1

Query: 428  MLELLRGQRRVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAG 249
            +++ L   R+V++    F+ ++   +  ++ +Y ++  GL   G +++A   L+ M+  G
Sbjct: 989  LVDCLCSARKVDDALHYFEELKSAGLDPDLISYNLMINGLGKSGKMKEALHLLDEMKSRG 1048

Query: 248  FVLNAFSYNGLIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDAETVM 69
               N ++YN LI  L   G   +A  +Y  +   G++P + TY+AL+    K  D +   
Sbjct: 1049 ITPNLYTYNTLIFNLGIVGMLEEAGRMYEELQQLGLEPDVFTYNALIRGYSKSGDPDGAY 1108

Query: 68   GLLEEMQSLGLRPNVYTF 15
             + E+M   G  PN  TF
Sbjct: 1109 AIYEKMMVGGCSPNSGTF 1126


>ref|XP_006845376.1| hypothetical protein AMTR_s00019p00039970 [Amborella trichopoda]
           gi|548847948|gb|ERN07051.1| hypothetical protein
           AMTR_s00019p00039970 [Amborella trichopoda]
          Length = 1123

 Score =  281 bits (720), Expect = 2e-73
 Identities = 155/280 (55%), Positives = 195/280 (69%), Gaps = 16/280 (5%)
 Frame = -1

Query: 794 MELCFSMICT-------TNVKCSVPTDCKPTVLSNYGSTRRIKTGNLK---------VLT 663
           MELC   +CT       T  K   P+  +       G     K   LK         V+ 
Sbjct: 1   MELCSGGLCTYSLNYLETKRKYGYPSSLRGLSFIIGGELHNGKVLCLKFRASFDTNTVVL 60

Query: 662 YGFLENWKKHGKKNVGFCGFVMKSSFERVVKGKTKNGLSSDEVIETLKSITDPIEALSFF 483
            GF   +K + + +   CG  + S  E  +K + + GL+SD VIE L+S +DPIEAL+FF
Sbjct: 61  TGFSCYFKGNRRTHHVSCGIDLSSYNEAKIKRRIRKGLNSDGVIEVLRSYSDPIEALAFF 120

Query: 482 QSVARQPNIVHTTESCNYMLELLRGQRRVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRV 303
           +S+A+QP I+HTTE+CNYML++LR   +V EM++VFDLMQKQIIKR+ ETY+ IF GL +
Sbjct: 121 KSIAQQPKIIHTTETCNYMLDILRINGKVTEMSMVFDLMQKQIIKRSQETYVTIFNGLDI 180

Query: 302 WGGIRQAPLALENMRRAGFVLNAFSYNGLIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKT 123
           +GGI++AP+ALE +  AGFVLNAFSYNGLIHLLLQSGF+ +AMEVYRRMVSE IKPSLKT
Sbjct: 181 FGGIKRAPVALERLSHAGFVLNAFSYNGLIHLLLQSGFQREAMEVYRRMVSENIKPSLKT 240

Query: 122 YSALMVASGKIRDAETVMGLLEEMQSLGLRPNVYTFTICI 3
           YSALMVA GK +D  TVM LL EM++LGLRPNVYT+TICI
Sbjct: 241 YSALMVAFGKRKDINTVMYLLHEMEALGLRPNVYTYTICI 280



 Score = 65.9 bits (159), Expect = 2e-08
 Identities = 45/152 (29%), Positives = 72/152 (47%)
 Frame = -1

Query: 458  IVHTTESCNYMLELLRGQRRVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAP 279
            I+ +T + N +++ L      E    +F+ M+K     NM+TY ++   L   G I +A 
Sbjct: 794  ILPSTHAYNILIDGLLKASCFEMAWGLFEKMKKVSSTPNMQTYNLLLDALGKSGKIEEAR 853

Query: 278  LALENMRRAGFVLNAFSYNGLIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVAS 99
              LE M   G   N  +YN ++  L++S    QA+E Y  ++S    PS +TY  L+   
Sbjct: 854  KLLEEMHIKGIKGNTITYNIMLLGLVRSNKLDQAIEFYYELLSREFSPSPRTYGPLIDGL 913

Query: 98   GKIRDAETVMGLLEEMQSLGLRPNVYTFTICI 3
             K    +    L EEM+  G +PN   + I I
Sbjct: 914  SKAGRVDEAKELFEEMREYGCKPNRAVYNILI 945



 Score = 65.5 bits (158), Expect = 3e-08
 Identities = 39/132 (29%), Positives = 72/132 (54%)
 Frame = -1

Query: 398  VEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNG 219
            +E     F  M K+ I+ +++TY I+   L + G +  A    E ++ +G   +   YN 
Sbjct: 954  LENACEFFKRMLKEGIQPDLKTYTILVDCLCMVGRVDDALQYFEALKISGHEPDLVFYNL 1013

Query: 218  LIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDAETVMGLLEEMQSLG 39
            +I+ L + G   +A+ +++ M S+G+ P L +Y+AL++  G++   E    + EE+Q  G
Sbjct: 1014 VINGLGKDGRLEEALSLFKEMQSKGLLPDLYSYNALILHLGRLGRVEEAGAMYEELQRKG 1073

Query: 38   LRPNVYTFTICI 3
            L PNV+T+   I
Sbjct: 1074 LEPNVFTYNALI 1085


>ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g31850, chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  281 bits (719), Expect = 3e-73
 Identities = 146/250 (58%), Positives = 188/250 (75%), Gaps = 4/250 (1%)
 Frame = -1

Query: 740 TDCKPTVLSNYGSTRRI---KTGNLKVLTYGFLENWKKHGKKNVGFCGFVMKSSFE-RVV 573
           ++C+  V S   S+R +     G+ +  T   + NWKKH KK   FC   +++  +  VV
Sbjct: 21  SECQVYVSSCNRSSRGLIWESLGDFQTATLSMV-NWKKHRKKRKDFCRLALQNPEQVMVV 79

Query: 572 KGKTKNGLSSDEVIETLKSITDPIEALSFFQSVARQPNIVHTTESCNYMLELLRGQRRVE 393
           KGKT+  +S DEV+  LKS+TDPI ALS+F S++  P ++HTTE+CN+MLE LR   +VE
Sbjct: 80  KGKTEIRVSEDEVLGVLKSMTDPIRALSYFYSISEFPTVLHTTETCNFMLEFLRVHDKVE 139

Query: 392 EMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNGLI 213
           +MA VF+ MQK+II+R+++TYL IFK L + GG+RQ    L  MR+AGFVLNA+SYNGLI
Sbjct: 140 DMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLI 199

Query: 212 HLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDAETVMGLLEEMQSLGLR 33
           HLL+QSGF G+A+EVYRRMVSEG+KPSLKTYSALMVA GK RD+E VM LL+EM+ LGLR
Sbjct: 200 HLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLR 259

Query: 32  PNVYTFTICI 3
           PNVYTFTICI
Sbjct: 260 PNVYTFTICI 269



 Score = 65.5 bits (158), Expect = 3e-08
 Identities = 56/204 (27%), Positives = 97/204 (47%), Gaps = 7/204 (3%)
 Frame = -1

Query: 599 MKSSFERVVKGKTKNGLSSDEVI--ETLKSITD--PIEALSFFQSVARQPNIVHTTESCN 432
           ++++ E  VK K  NG   D+VI    L    D   ++    F S       +    +  
Sbjct: 313 LENAKELFVKMKA-NGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFT 371

Query: 431 YMLELLRGQRRVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRA 252
            ++++L   R  +E    FD+M+KQ I  N+ TY  +  GL   G I  A   L+ M   
Sbjct: 372 ILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESV 431

Query: 251 GFVLNAFSYNGLIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVA---SGKIRDA 81
           G    A++Y   I    +SG  G+A+E + +M ++GI P++   +A + +    G++R+A
Sbjct: 432 GVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREA 491

Query: 80  ETVMGLLEEMQSLGLRPNVYTFTI 9
           +T+   L E    GL P+  T+ +
Sbjct: 492 KTMFNGLREN---GLAPDSVTYNM 512



 Score = 60.5 bits (145), Expect = 1e-06
 Identities = 38/149 (25%), Positives = 74/149 (49%), Gaps = 3/149 (2%)
 Frame = -1

Query: 440  SCNYMLELLRGQRRVEEMAVVFDLMQKQI---IKRNMETYLIIFKGLRVWGGIRQAPLAL 270
            +C     L+ G  ++ +      L ++ +   I+ ++++Y I+   L + G + +A    
Sbjct: 927  NCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYF 986

Query: 269  ENMRRAGFVLNAFSYNGLIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKI 90
              ++  G   +  +YN +I+ L +S    +A+ +Y  M + GI P L TY++LM+  G  
Sbjct: 987  NELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLA 1046

Query: 89   RDAETVMGLLEEMQSLGLRPNVYTFTICI 3
               E    + EE+Q  GL P+V+T+   I
Sbjct: 1047 GMVEQAKRMYEELQLAGLEPDVFTYNALI 1075


>ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  281 bits (719), Expect = 3e-73
 Identities = 146/250 (58%), Positives = 188/250 (75%), Gaps = 4/250 (1%)
 Frame = -1

Query: 740 TDCKPTVLSNYGSTRRI---KTGNLKVLTYGFLENWKKHGKKNVGFCGFVMKSSFE-RVV 573
           ++C+  V S   S+R +     G+ +  T   + NWKKH KK   FC   +++  +  VV
Sbjct: 21  SECQVYVSSCNRSSRGLIWESLGDFQTATLSMV-NWKKHRKKRKDFCRLALQNPEQVMVV 79

Query: 572 KGKTKNGLSSDEVIETLKSITDPIEALSFFQSVARQPNIVHTTESCNYMLELLRGQRRVE 393
           KGKT+  +S DEV+  LKS+TDPI ALS+F S++  P ++HTTE+CN+MLE LR   +VE
Sbjct: 80  KGKTEIRVSEDEVLGVLKSMTDPIRALSYFYSISEFPTVLHTTETCNFMLEFLRVHDKVE 139

Query: 392 EMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNGLI 213
           +MA VF+ MQK+II+R+++TYL IFK L + GG+RQ    L  MR+AGFVLNA+SYNGLI
Sbjct: 140 DMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLI 199

Query: 212 HLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDAETVMGLLEEMQSLGLR 33
           HLL+QSGF G+A+EVYRRMVSEG+KPSLKTYSALMVA GK RD+E VM LL+EM+ LGLR
Sbjct: 200 HLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLR 259

Query: 32  PNVYTFTICI 3
           PNVYTFTICI
Sbjct: 260 PNVYTFTICI 269



 Score = 66.6 bits (161), Expect = 1e-08
 Identities = 57/204 (27%), Positives = 97/204 (47%), Gaps = 7/204 (3%)
 Frame = -1

Query: 599 MKSSFERVVKGKTKNGLSSDEVI--ETLKSITD--PIEALSFFQSVARQPNIVHTTESCN 432
           ++++ E  VK K  NG   D+VI    L    D   ++    F S       +    +  
Sbjct: 313 LENAKELFVKMKA-NGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFT 371

Query: 431 YMLELLRGQRRVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRA 252
            ++++L   R  +E    FD+M+KQ I  N+ TY  +  GL   G I  A   L  M   
Sbjct: 372 ILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESV 431

Query: 251 GFVLNAFSYNGLIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVA---SGKIRDA 81
           G    A++YN  I    +SG  G+A+E + +M ++GI P++   +A + +    G++R+A
Sbjct: 432 GVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREA 491

Query: 80  ETVMGLLEEMQSLGLRPNVYTFTI 9
           +T+   L E    GL P+  T+ +
Sbjct: 492 KTMFNGLREN---GLAPDSVTYNM 512



 Score = 60.5 bits (145), Expect = 1e-06
 Identities = 38/149 (25%), Positives = 74/149 (49%), Gaps = 3/149 (2%)
 Frame = -1

Query: 440  SCNYMLELLRGQRRVEEMAVVFDLMQKQI---IKRNMETYLIIFKGLRVWGGIRQAPLAL 270
            +C     L+ G  ++ +      L ++ +   I+ ++++Y I+   L + G + +A    
Sbjct: 927  NCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYF 986

Query: 269  ENMRRAGFVLNAFSYNGLIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKI 90
              ++  G   +  +YN +I+ L +S    +A+ +Y  M + GI P L TY++LM+  G  
Sbjct: 987  NELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLA 1046

Query: 89   RDAETVMGLLEEMQSLGLRPNVYTFTICI 3
               E    + EE+Q  GL P+V+T+   I
Sbjct: 1047 GMVEQAKRMYEELQLAGLEPDVFTYNALI 1075


>ref|XP_006350217.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Solanum tuberosum]
          Length = 1080

 Score =  280 bits (717), Expect = 5e-73
 Identities = 144/227 (63%), Positives = 178/227 (78%), Gaps = 1/227 (0%)
 Frame = -1

Query: 680 NLKVLTYGFLENWKKHGKKNVGFCGFVMKSSFERV-VKGKTKNGLSSDEVIETLKSITDP 504
           NL     G + N  K  KK V    FVMK S + V V GK +NG+S++ ++  L+SI++P
Sbjct: 11  NLNFFPGGSVLNCNKIRKKYVVTSSFVMKCSNDVVLVNGKPRNGISAEGLLRNLRSISEP 70

Query: 503 IEALSFFQSVARQPNIVHTTESCNYMLELLRGQRRVEEMAVVFDLMQKQIIKRNMETYLI 324
            EAL+ F+SVA  P +VHTTE+CNYMLE LR   R+ +MAVVFDLMQKQII R+++TYLI
Sbjct: 71  TEALALFKSVAEMPRVVHTTETCNYMLEYLRVLERINDMAVVFDLMQKQIIYRSLDTYLI 130

Query: 323 IFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNGLIHLLLQSGFRGQAMEVYRRMVSEG 144
           IFKGL + GGIR+AP ALE M++AGFVLNA+SYNGLIHL+LQ+GF  +A++VYRRM+SE 
Sbjct: 131 IFKGLHIRGGIREAPFALERMKKAGFVLNAYSYNGLIHLILQAGFWQEALKVYRRMISEK 190

Query: 143 IKPSLKTYSALMVASGKIRDAETVMGLLEEMQSLGLRPNVYTFTICI 3
           +KPSLKTYSALMVA GK RD ETVM LL EM+ LGLRPN+YTFTICI
Sbjct: 191 LKPSLKTYSALMVACGKRRDTETVMRLLSEMEGLGLRPNIYTFTICI 237



 Score = 65.9 bits (159), Expect = 2e-08
 Identities = 59/221 (26%), Positives = 102/221 (46%), Gaps = 14/221 (6%)
 Frame = -1

Query: 623  NVGFCGFVMKSSFERVVK--------GKTKNGLSSDEVIETLKSITDPIEALSFFQSVAR 468
            N+   G V  +  ER +         G T    +   +I+ L  + +  +A  FF+ +A 
Sbjct: 831  NILISGLVKSNKVERAMDFYYDLVSLGFTPTPCTYGPLIDGLLKVKNFDKAKDFFEEMAE 890

Query: 467  ---QPNIVHTTESCNYMLELLRGQRRVEEMAVVFDL---MQKQIIKRNMETYLIIFKGLR 306
               +PN      S  Y + L+ G  +  ++    DL   M K+ ++ +++TY I+   L 
Sbjct: 891  YGCRPN------SAIYNI-LINGFGKAGDLKAACDLFNRMNKEGVRPDLKTYTILVDCLC 943

Query: 305  VWGGIRQAPLALENMRRAGFVLNAFSYNGLIHLLLQSGFRGQAMEVYRRMVSEGIKPSLK 126
                +  A    E ++ AG   +  SYN +I+ L +SG   +A+ +   M S GI P+L 
Sbjct: 944  SARKVDDALHYFEELKSAGLDPDLISYNLMINGLGKSGKMKEALHLLDEMKSRGITPNLY 1003

Query: 125  TYSALMVASGKIRDAETVMGLLEEMQSLGLRPNVYTFTICI 3
            TY+ L+   G +   E    + EE+Q  GL P+V+T+   I
Sbjct: 1004 TYNTLIFNLGIVGMLEEAGRMYEELQQFGLEPDVFTYNALI 1044



 Score = 58.5 bits (140), Expect = 4e-06
 Identities = 36/138 (26%), Positives = 69/138 (50%)
 Frame = -1

Query: 428  MLELLRGQRRVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAG 249
            +++ L   R+V++    F+ ++   +  ++ +Y ++  GL   G +++A   L+ M+  G
Sbjct: 938  LVDCLCSARKVDDALHYFEELKSAGLDPDLISYNLMINGLGKSGKMKEALHLLDEMKSRG 997

Query: 248  FVLNAFSYNGLIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDAETVM 69
               N ++YN LI  L   G   +A  +Y  +   G++P + TY+AL+    K  D +   
Sbjct: 998  ITPNLYTYNTLIFNLGIVGMLEEAGRMYEELQQFGLEPDVFTYNALIRGYSKSGDPDGAY 1057

Query: 68   GLLEEMQSLGLRPNVYTF 15
             + E+M   G  PN  TF
Sbjct: 1058 AIYEKMMVGGCSPNSGTF 1075


>gb|EXB86664.1| hypothetical protein L484_013194 [Morus notabilis]
          Length = 1098

 Score =  280 bits (715), Expect = 8e-73
 Identities = 156/260 (60%), Positives = 187/260 (71%), Gaps = 2/260 (0%)
 Frame = -1

Query: 776 MICTTNVKCSVPTDCKPTVLSNYGSTRRIKTGNLKVLTYGFLENWKKHGKKNVGFCGFVM 597
           M C++       T+ + + L+   S  RI  GN+KV   G+L   KK  +K VG  GFVM
Sbjct: 1   MYCSSVSYTCAFTESRVSALNFSNSKGRI-FGNVKVWACGYLVKQKKLRRKRVGLSGFVM 59

Query: 596 K--SSFERVVKGKTKNGLSSDEVIETLKSITDPIEALSFFQSVARQPNIVHTTESCNYML 423
           K     ER V  +     S++EV   LKSI DP  A S+F SVAR P +VHTT++CNYML
Sbjct: 60  KIPDEGERTVLVR-----SAEEVARVLKSILDPNCAFSYFMSVARLPKVVHTTDTCNYML 114

Query: 422 ELLRGQRRVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFV 243
           ELLR   RVE+MAVVFD MQKQ+I RN+ TYL IFKGL +  GIRQAP+ALE M RAGFV
Sbjct: 115 ELLRTNGRVEDMAVVFDFMQKQLINRNLNTYLTIFKGLYIRVGIRQAPIALEKMSRAGFV 174

Query: 242 LNAFSYNGLIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDAETVMGL 63
           LNA+SYNGLI+L+LQ+G   +A+ VY+RMVSEG KPSLKTYSALMVA GK RD ETVMGL
Sbjct: 175 LNAYSYNGLIYLILQTGSFREALVVYKRMVSEGFKPSLKTYSALMVAFGKRRDTETVMGL 234

Query: 62  LEEMQSLGLRPNVYTFTICI 3
           L+EM+ LGLRPN+YTFTICI
Sbjct: 235 LQEMEDLGLRPNIYTFTICI 254



 Score = 64.3 bits (155), Expect = 7e-08
 Identities = 45/160 (28%), Positives = 79/160 (49%), Gaps = 1/160 (0%)
 Frame = -1

Query: 587  FERVVKGKTKNGLSSDEVIETLKSITDPIE-ALSFFQSVARQPNIVHTTESCNYMLELLR 411
            F+R+VK   +  L S  ++     +   I+ AL +F+ + +   +   + S N M+  L 
Sbjct: 936  FKRMVKEGIRPDLKSYTILVDCLCLAGRIDDALHYFEEL-KLSGLNPDSVSYNLMINALG 994

Query: 410  GQRRVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAF 231
              RRVEE   ++D M+ + I  ++ TY  +   L + G + QA    E ++  G   + F
Sbjct: 995  RSRRVEEALSLYDEMRSRRITPDLYTYNSLILNLGIAGMVEQAGSMYEELQLRGLEPDVF 1054

Query: 230  SYNGLIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSAL 111
            +YN LI     SG    A  VY++M+  G  P++ T++ L
Sbjct: 1055 TYNALIRAYSASGNPDHAYAVYKKMMIGGCSPNVSTFAQL 1094



 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 41/132 (31%), Positives = 71/132 (53%)
 Frame = -1

Query: 398  VEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNG 219
            VE   ++F  M K+ I+ ++++Y I+   L + G I  A    E ++ +G   ++ SYN 
Sbjct: 929  VETACMLFKRMVKEGIRPDLKSYTILVDCLCLAGRIDDALHYFEELKLSGLNPDSVSYNL 988

Query: 218  LIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDAETVMGLLEEMQSLG 39
            +I+ L +S    +A+ +Y  M S  I P L TY++L++  G     E    + EE+Q  G
Sbjct: 989  MINALGRSRRVEEALSLYDEMRSRRITPDLYTYNSLILNLGIAGMVEQAGSMYEELQLRG 1048

Query: 38   LRPNVYTFTICI 3
            L P+V+T+   I
Sbjct: 1049 LEPDVFTYNALI 1060



 Score = 61.2 bits (147), Expect = 6e-07
 Identities = 46/196 (23%), Positives = 87/196 (44%), Gaps = 2/196 (1%)
 Frame = -1

Query: 584  ERVVKGKTKNGLSSDEVIETLKSITDPIEALSFFQSVARQPNIVHTTESCNY--MLELLR 411
            E + +G   N ++ + VI +L    +  +A+ F+  +        +   C Y  +++ L 
Sbjct: 833  EMISRGCKPNTITYNIVISSLVKSDNVDKAIDFYYDLVSGD---FSPSPCTYGPLIDGLL 889

Query: 410  GQRRVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAF 231
              RR EE    F+ M     K N   + I+  G    G +  A +  + M + G   +  
Sbjct: 890  KSRRQEEAMRFFEEMGDYGCKPNCAIFNILINGFGKAGDVETACMLFKRMVKEGIRPDLK 949

Query: 230  SYNGLIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDAETVMGLLEEM 51
            SY  L+  L  +G    A+  +  +   G+ P   +Y+ ++ A G+ R  E  + L +EM
Sbjct: 950  SYTILVDCLCLAGRIDDALHYFEELKLSGLNPDSVSYNLMINALGRSRRVEEALSLYDEM 1009

Query: 50   QSLGLRPNVYTFTICI 3
            +S  + P++YT+   I
Sbjct: 1010 RSRRITPDLYTYNSLI 1025


>ref|XP_007136936.1| hypothetical protein PHAVU_009G086500g [Phaseolus vulgaris]
           gi|561010023|gb|ESW08930.1| hypothetical protein
           PHAVU_009G086500g [Phaseolus vulgaris]
          Length = 1106

 Score =  278 bits (710), Expect = 3e-72
 Identities = 145/255 (56%), Positives = 182/255 (71%), Gaps = 1/255 (0%)
 Frame = -1

Query: 764 TNVKCSVPTDCKPTVLSNYGSTRRIKTGNLKVLTYGFLENWKKHGKKNVGFCGFVMKSSF 585
           ++  C    D     +SN G         +K L  G L NWKKHGK+ +G    V + + 
Sbjct: 8   SSTSCCAFGDTNVYAMSNNGFFGGTPFVKMKSLPNGSLVNWKKHGKRQLGIGVLVTRCAP 67

Query: 584 ERV-VKGKTKNGLSSDEVIETLKSITDPIEALSFFQSVARQPNIVHTTESCNYMLELLRG 408
           E V V GK+K  +SS+EVI  LKSI DP  AL +F+ V++ PN+VHT E+CNYMLELLR 
Sbjct: 68  EVVAVNGKSKTRVSSEEVIGVLKSILDPNSALLYFKMVSQLPNLVHTPETCNYMLELLRA 127

Query: 407 QRRVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFS 228
             RVE+M  VFD MQ+Q+I RN  TYL IFK L + GGIRQAP AL  MR+AGFVLNA+S
Sbjct: 128 HGRVEDMVFVFDFMQEQVINRNPNTYLTIFKALSIKGGIRQAPFALGKMRQAGFVLNAYS 187

Query: 227 YNGLIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDAETVMGLLEEMQ 48
           YNGLIH LLQ GF  +A++VY+RM+SEG+KPS+KTYSALMVA GK R+  T+M LLEEM+
Sbjct: 188 YNGLIHFLLQPGFCKEALKVYKRMISEGMKPSMKTYSALMVALGKRRETGTIMDLLEEMK 247

Query: 47  SLGLRPNVYTFTICI 3
           +LGL+PN+YT+TICI
Sbjct: 248 TLGLKPNIYTYTICI 262



 Score = 63.2 bits (152), Expect = 1e-07
 Identities = 42/169 (24%), Positives = 85/169 (50%), Gaps = 3/169 (1%)
 Frame = -1

Query: 500  EALSFFQSVARQPNIVHTTESCNYMLELLRGQRRVEEMAVVFDLMQKQI---IKRNMETY 330
            EA++ F+ ++      H   +C     L+ G  +   + +  DL ++ +   I+ ++++Y
Sbjct: 904  EAMNIFEEMSDY----HCKPNCAIYNILINGFGKAGNVDIACDLFKRMVKEGIRPDLKSY 959

Query: 329  LIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNGLIHLLLQSGFRGQAMEVYRRMVS 150
             I+ + L +   +  A    E ++  G   +  SYN +I+ L +S    +A+ ++  M +
Sbjct: 960  TILVECLCMSDRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSHRFEEALSLFSEMKN 1019

Query: 149  EGIKPSLKTYSALMVASGKIRDAETVMGLLEEMQSLGLRPNVYTFTICI 3
             GI P L TY++L++  G     +    + EE+Q +GL PNV+T+   I
Sbjct: 1020 RGITPDLYTYNSLILHFGNAGMVDRAGKMFEELQLMGLEPNVFTYNALI 1068



 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 45/139 (32%), Positives = 68/139 (48%), Gaps = 3/139 (2%)
 Frame = -1

Query: 410 GQRRVEEMAVVFDLMQKQI---IKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVL 240
           G+RR  E   + DL+++     +K N+ TY I  + L   G I  A   L+ M   G   
Sbjct: 231 GKRR--ETGTIMDLLEEMKTLGLKPNIYTYTICIRVLGRAGRIDDAYGILKTMDNEGCGP 288

Query: 239 NAFSYNGLIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDAETVMGLL 60
           +  +Y  LI  L  +G   +AME+Y +M + G KP   TY  LM   G   + E V    
Sbjct: 289 DVVTYTVLIDALCVAGKLDKAMELYTKMRASGHKPDQVTYITLMGNFGNYGNLEMVKRFW 348

Query: 59  EEMQSLGLRPNVYTFTICI 3
            EM++ G  P+V ++TI +
Sbjct: 349 SEMEADGYAPDVVSYTIIV 367


>ref|XP_004293246.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 1089

 Score =  263 bits (672), Expect = 8e-68
 Identities = 130/208 (62%), Positives = 167/208 (80%), Gaps = 2/208 (0%)
 Frame = -1

Query: 620 VGFCGFVMKSSFERVVKG--KTKNGLSSDEVIETLKSITDPIEALSFFQSVARQPNIVHT 447
           +G C FV+K   ++VV    K +N +SS+EV+  LKSI+DP  A SFF+S+A  P ++HT
Sbjct: 38  LGLCAFVIKRPHQQVVVNTKKPRNSVSSEEVVRVLKSISDPTSAFSFFKSIADLPTVLHT 97

Query: 446 TESCNYMLELLRGQRRVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALE 267
           TE+CNYML+LL   RRV +MA VFDLMQ+ II R+++TYL IFKGL + GGIR AP AL 
Sbjct: 98  TETCNYMLQLLGVHRRVGDMAFVFDLMQRHIINRSLDTYLTIFKGLNIRGGIRAAPYALP 157

Query: 266 NMRRAGFVLNAFSYNGLIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKIR 87
            +R+ GFVLNAFSYNGLI++L+QSG+  +A++VY+ MVS+GI+PSLKTYSALMVA GK R
Sbjct: 158 RLRKHGFVLNAFSYNGLIYMLIQSGYCREALQVYQTMVSQGIRPSLKTYSALMVALGKRR 217

Query: 86  DAETVMGLLEEMQSLGLRPNVYTFTICI 3
           D + VMGLL+EM++LGLRPNVYTFTICI
Sbjct: 218 DVQAVMGLLKEMETLGLRPNVYTFTICI 245



 Score = 64.7 bits (156), Expect = 5e-08
 Identities = 46/160 (28%), Positives = 80/160 (50%), Gaps = 1/160 (0%)
 Frame = -1

Query: 587  FERVVKGKTKNGLSSDEVIETLKSITDPIE-ALSFFQSVARQPNIVHTTESCNYMLELLR 411
            F+R++K   +  L S  ++         ++ AL +F+ + RQ  +   + S N M+  L 
Sbjct: 927  FKRMIKEGIRPDLKSFTILVDCYCQAGRVDDALHYFEEL-RQSGLDPDSVSYNLMINGLG 985

Query: 410  GQRRVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAF 231
              RR+EE  V++D M+K+ I  ++ TY  +   L + G + +A    + +   G   + F
Sbjct: 986  RSRRMEEALVLYDEMRKRRITPDIFTYNSLILNLGLVGMVEEAGRIYKELLLTGLEPDVF 1045

Query: 230  SYNGLIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSAL 111
            +YN LI L   SG    A  VY+ M+  G  P++ TY+ L
Sbjct: 1046 TYNALIRLYSTSGNTDDAYAVYKNMMVGGCSPNVGTYAQL 1085



 Score = 62.0 bits (149), Expect = 3e-07
 Identities = 46/163 (28%), Positives = 74/163 (45%)
 Frame = -1

Query: 503 IEALSFFQSVARQPNIVHTTESCNYMLELLRGQRRVEEMAVVFDLMQKQIIKRNMETYLI 324
           IEA    ++    PNIV    +CN  L  L  + R+ E   ++D +    +  +  TY +
Sbjct: 433 IEAYERMKTRGIVPNIV----ACNASLYGLAEEGRLHEAKHIYDELIYSGLSPDSVTYNM 488

Query: 323 IFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNGLIHLLLQSGFRGQAMEVYRRMVSEG 144
           + K     G I +A   L  M R G   +    N LI +L ++G   +A +++ RM    
Sbjct: 489 MMKCYSRVGQIDEAIKLLSEMERNGCEADVIIVNSLIDMLYKAGRVDEAWQMFYRMKEMK 548

Query: 143 IKPSLKTYSALMVASGKIRDAETVMGLLEEMQSLGLRPNVYTF 15
           + P++ TY+ L+ A GK       + + E M   G  PN  TF
Sbjct: 549 LTPTVVTYNTLLAALGKEGQVGKAIAMFENMTEQGCPPNAITF 591



 Score = 58.2 bits (139), Expect = 5e-06
 Identities = 44/166 (26%), Positives = 79/166 (47%)
 Frame = -1

Query: 500 EALSFFQSVARQPNIVHTTESCNYMLELLRGQRRVEEMAVVFDLMQKQIIKRNMETYLII 321
           EAL  +Q++  Q  I  + ++ + ++  L  +R V+ +  +   M+   ++ N+ T+ I 
Sbjct: 186 EALQVYQTMVSQ-GIRPSLKTYSALMVALGKRRDVQAVMGLLKEMETLGLRPNVYTFTIC 244

Query: 320 FKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNGLIHLLLQSGFRGQAMEVYRRMVSEGI 141
            + L   G I +A    + M   G   +  +Y  LI  L  +G    A +++  M + G 
Sbjct: 245 IRVLGRAGKIDEAYQIFKRMDNEGCGPDVITYTVLIDALCNAGKLDNAKKLFANMKARGH 304

Query: 140 KPSLKTYSALMVASGKIRDAETVMGLLEEMQSLGLRPNVYTFTICI 3
           KP   TY  L+      +D +TV     EM++ G  P+V TFTI +
Sbjct: 305 KPDQVTYITLLDKFSDCKDLDTVREFWSEMKADGYAPDVVTFTILV 350


>ref|XP_004501390.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Cicer arietinum]
          Length = 1120

 Score =  257 bits (656), Expect = 5e-66
 Identities = 143/278 (51%), Positives = 187/278 (67%), Gaps = 13/278 (4%)
 Frame = -1

Query: 797 VMELCFSMI--CTTNVKCSVPTDCKPTVLSNYG----STRRIKTGNLKVLTYGFLENWKK 636
           V+ LC S    C+    C    D    V+SN+G     T  +K   +K  + G L NWKK
Sbjct: 3   VLLLCSSTTTCCSGMSFCCALNDTNFCVVSNHGLFGGGTNFVK---MKTFSNGSLLNWKK 59

Query: 635 HGKKNVGF----CGFVMKSSFER---VVKGKTKNGLSSDEVIETLKSITDPIEALSFFQS 477
            G++ V       G  ++ + E    VV GK K  +SS+EV+  LKSI +P    S+F+ 
Sbjct: 60  RGRRLVSHRNNDFGIRIRCARENEVVVVNGKNKTRVSSEEVMSVLKSILEPSSVFSYFKL 119

Query: 476 VARQPNIVHTTESCNYMLELLRGQRRVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWG 297
           V++ PN VH T++CNYMLE LR Q R+E+M  VF+LMQKQ+I RN+ TY+ IFK L + G
Sbjct: 120 VSQLPNFVHNTDACNYMLEFLRDQGRIEDMVYVFNLMQKQVIYRNLNTYMTIFKALSIKG 179

Query: 296 GIRQAPLALENMRRAGFVLNAFSYNGLIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYS 117
           GI  AP AL  MR+AGFVLNA+SYNGLIHLLL  GF  +A++VY+RM+SEG+KPS+KTYS
Sbjct: 180 GIGNAPSALGKMRQAGFVLNAYSYNGLIHLLL-PGFYKEALKVYKRMISEGMKPSMKTYS 238

Query: 116 ALMVASGKIRDAETVMGLLEEMQSLGLRPNVYTFTICI 3
           ALMVA G+ RD   +M LLEEM++LGLRPN+YT+TICI
Sbjct: 239 ALMVALGRRRDTRNIMNLLEEMKNLGLRPNIYTYTICI 276



 Score = 67.0 bits (162), Expect = 1e-08
 Identities = 39/142 (27%), Positives = 77/142 (54%), Gaps = 3/142 (2%)
 Frame = -1

Query: 419  LLRGQRRVEEMAVVFDLMQKQI---IKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAG 249
            L+ G  +  E+ +  DL +K +   I+ ++++Y I+ + L + G + +A    E ++  G
Sbjct: 941  LINGFGKAGEIDIALDLFKKMVKEGIRPDLKSYTILVECLCITGRVDEAFQYFEELKLTG 1000

Query: 248  FVLNAFSYNGLIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDAETVM 69
               +  SYN +I+ L +S    +A+ ++  M + GI P L TY++L+   G     +  +
Sbjct: 1001 LDPDTVSYNFIINGLGKSRRLEEALSLFSEMKNRGISPDLYTYNSLIFHLGVTGKVDLAV 1060

Query: 68   GLLEEMQSLGLRPNVYTFTICI 3
             + EE+Q +GL P+V+T+   I
Sbjct: 1061 KMYEELQLVGLEPSVFTYNALI 1082


>ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355492334|gb|AES73537.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 1246

 Score =  251 bits (642), Expect = 2e-64
 Identities = 140/279 (50%), Positives = 188/279 (67%), Gaps = 14/279 (5%)
 Frame = -1

Query: 797 VMELCFSMI--CTTNVK-CSVPTDCKPTVLSNYG--STRRIKTGNLKVLTYGFLENWKKH 633
           V+ LC S    C   +  C   TD    VL+N+G  +T  +K   +K L+ G L N KKH
Sbjct: 3   VLLLCSSTTTCCNNGMSFCYTLTDTNFYVLTNHGGPTTNFVK---IKTLSNGSLLNLKKH 59

Query: 632 GKKNVGFCGF--VMKSSFERVV-------KGKTKNGLSSDEVIETLKSITDPIEALSFFQ 480
           G   VG   F  + + + +  +       + K K  +S +EV+  LKSI+DP  A S+F+
Sbjct: 60  GTTRVGHRAFRTITRCNHDNDLVVVNNGKRKKNKTSVSEEEVMTILKSISDPNSAFSYFK 119

Query: 479 SVARQPNIVHTTESCNYMLELLRGQRRVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVW 300
            V++  N VHTT++CNYMLE+LR QRR+E+M  VFDLMQK++I RN+ TY+ IFK L + 
Sbjct: 120 IVSQLTNFVHTTDACNYMLEILREQRRIEDMVFVFDLMQKKVIYRNLTTYMTIFKALSIK 179

Query: 299 GGIRQAPLALENMRRAGFVLNAFSYNGLIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTY 120
           GGI +AP AL  M   GF+LNA+SYNGLIHLLL  GF  +A++VY+RM+SEG+KPS+KTY
Sbjct: 180 GGIGRAPFALRKMTEVGFILNAYSYNGLIHLLL-PGFCNEALKVYKRMISEGMKPSMKTY 238

Query: 119 SALMVASGKIRDAETVMGLLEEMQSLGLRPNVYTFTICI 3
           SALMVA G+  D   +M LLEEM+S+GLRPN+YT+TICI
Sbjct: 239 SALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICI 277



 Score = 67.0 bits (162), Expect = 1e-08
 Identities = 38/126 (30%), Positives = 71/126 (56%)
 Frame = -1

Query: 380  VFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNGLIHLLL 201
            +F  M K+ I+ ++++Y I+ + L + G I +A    E ++  G   +  SYN +I+ L 
Sbjct: 958  LFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLG 1017

Query: 200  QSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDAETVMGLLEEMQSLGLRPNVY 21
            +S    +A+ ++  M + GI P L TY+AL++  G     +  + + EE+Q +GL P+V+
Sbjct: 1018 KSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVF 1077

Query: 20   TFTICI 3
            T+   I
Sbjct: 1078 TYNALI 1083


>ref|XP_006412544.1| hypothetical protein EUTSA_v10024264mg [Eutrema salsugineum]
           gi|557113714|gb|ESQ53997.1| hypothetical protein
           EUTSA_v10024264mg [Eutrema salsugineum]
          Length = 1118

 Score =  245 bits (625), Expect = 2e-62
 Identities = 138/269 (51%), Positives = 183/269 (68%), Gaps = 10/269 (3%)
 Frame = -1

Query: 779 SMICTTNVKCSVPTDCKPTVLSNYGSTR------RIKTGNLK--VLTYGFLENWKKHGKK 624
           +++C+T++ C   T    +++SN    +      ++ TG  K   L  G + + KKH +K
Sbjct: 3   ALLCSTSL-CGDFTVSDASLVSNIKGGKFCWRRGKLVTGESKFHALKVGSVSHRKKHWRK 61

Query: 623 NVGFCGFVMKSSFERV--VKGKTKNGLSSDEVIETLKSITDPIEALSFFQSVARQPNIVH 450
            +      MK S   V  +   +K+  SS EV + L S+ D   A S+F+SVA   N+VH
Sbjct: 62  TMRCSVVSMKGSDFSVSMINKTSKSNPSSGEVTKVLMSLPDTDSAFSYFKSVAANSNLVH 121

Query: 449 TTESCNYMLELLRGQRRVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLAL 270
           TTE+CNYMLE LR   ++EEMA VFDLMQK+IIKR++ T+L +FK L V GG+RQAP AL
Sbjct: 122 TTETCNYMLEALRVDGKIEEMAYVFDLMQKRIIKRDINTFLTVFKCLSVKGGLRQAPYAL 181

Query: 269 ENMRRAGFVLNAFSYNGLIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKI 90
             MR +GF LNA+SYNGLIHLLL+S F  +AMEVYRRM+ EG +PSL+TYS+LMV  GK 
Sbjct: 182 RKMRESGFALNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKR 241

Query: 89  RDAETVMGLLEEMQSLGLRPNVYTFTICI 3
           RD E VM LL+EM++LGL+PNVYTFTICI
Sbjct: 242 RDIEAVMALLKEMETLGLKPNVYTFTICI 270



 Score = 57.8 bits (138), Expect = 6e-06
 Identities = 37/127 (29%), Positives = 67/127 (52%), Gaps = 1/127 (0%)
 Frame = -1

Query: 380  VFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNGLIHLLL 201
            +F  M K+ ++ +++TY ++   L + G + +       ++ +G   +   YN +I+ L 
Sbjct: 954  LFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLDPDVVCYNLIINGLG 1013

Query: 200  QSGFRGQAMEVYRRMV-SEGIKPSLKTYSALMVASGKIRDAETVMGLLEEMQSLGLRPNV 24
            +S    +A+E+Y  M  S GI P L TY++L++  G     E    + +E+Q  GL PNV
Sbjct: 1014 KSQRLEEALELYNEMKNSRGITPDLYTYNSLILNMGIAGMVEGAGKIYDEIQRAGLEPNV 1073

Query: 23   YTFTICI 3
            +TF   I
Sbjct: 1074 FTFNALI 1080


>ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
           lyrata] gi|297315145|gb|EFH45568.1| hypothetical protein
           ARALYDRAFT_491552 [Arabidopsis lyrata subsp. lyrata]
          Length = 1114

 Score =  244 bits (622), Expect = 5e-62
 Identities = 131/216 (60%), Positives = 159/216 (73%), Gaps = 3/216 (1%)
 Frame = -1

Query: 641 KKHGKKNVGFCGFV-MKSS--FERVVKGKTKNGLSSDEVIETLKSITDPIEALSFFQSVA 471
           KKH +     C  V MKSS     +++  +K  LSS EV   L S  D   + S+F+SVA
Sbjct: 52  KKHWRMKSMRCSLVSMKSSGFSGSMIRKSSKPDLSSSEVARVLMSFPDTDSSFSYFKSVA 111

Query: 470 RQPNIVHTTESCNYMLELLRGQRRVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGI 291
              N+VHTTE+CNYMLE LR   ++EEMA VFDLMQK+IIKR+  TYL IFK L V GG+
Sbjct: 112 GNSNLVHTTETCNYMLEALRVDGKIEEMAYVFDLMQKRIIKRDTNTYLTIFKCLSVKGGL 171

Query: 290 RQAPLALENMRRAGFVLNAFSYNGLIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSAL 111
           RQAP AL  MR  GFVLNA+SYNGLIHLLL+S F  +AMEVYRRM+ +G +PSL+TYS+L
Sbjct: 172 RQAPFALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSL 231

Query: 110 MVASGKIRDAETVMGLLEEMQSLGLRPNVYTFTICI 3
           MV  GK RD E+VMGLL+EM++LGL+PNVYTFTICI
Sbjct: 232 MVGLGKRRDIESVMGLLKEMETLGLKPNVYTFTICI 267



 Score = 57.8 bits (138), Expect = 6e-06
 Identities = 37/131 (28%), Positives = 62/131 (47%)
 Frame = -1

Query: 395  EEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNGL 216
            + + + +DLM  +       TY  +  GL   G + +A    E M   G   N   YN L
Sbjct: 875  DALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNIL 934

Query: 215  IHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDAETVMGLLEEMQSLGL 36
            I+   ++G    A  +++RMV EG++P LKTYS L+     +   +  +    E++  GL
Sbjct: 935  INGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGL 994

Query: 35   RPNVYTFTICI 3
             P+V  + + I
Sbjct: 995  NPDVVCYNLII 1005


>ref|XP_006282792.1| hypothetical protein CARUB_v10006400mg [Capsella rubella]
           gi|482551497|gb|EOA15690.1| hypothetical protein
           CARUB_v10006400mg [Capsella rubella]
          Length = 1114

 Score =  243 bits (620), Expect = 8e-62
 Identities = 146/267 (54%), Positives = 183/267 (68%), Gaps = 8/267 (2%)
 Frame = -1

Query: 779 SMICTTNVKCSVPTDCKPTVLSNYGST---RR--IKTGNLKVLTYGFLENWKKHGKKNVG 615
           +++C+T++ C   T     +LSN  +    RR  + TG LK      + + KKH +K   
Sbjct: 3   ALLCSTSL-CGDVTVGDACLLSNIKAKCCWRRDNLVTGGLKFHPLK-IGSRKKHWRKKSM 60

Query: 614 FCGFV-MKSS-FERVVKGKT-KNGLSSDEVIETLKSITDPIEALSFFQSVARQPNIVHTT 444
            C  V MKSS F   + GK+ K+ LSS EV   LKS  D     S+F+SVA   N+VH+T
Sbjct: 61  RCSVVSMKSSDFSASMIGKSLKSNLSSIEVTRVLKSFPDIDSKFSYFKSVADNSNLVHST 120

Query: 443 ESCNYMLELLRGQRRVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALEN 264
           E+CNYMLE LR   +VEEM  VFD MQK+IIKR+  TYL IFK L V GG+RQ+P AL  
Sbjct: 121 ETCNYMLEALRVNGKVEEMVYVFDFMQKRIIKRDANTYLTIFKSLSVKGGLRQSPYALRK 180

Query: 263 MRRAGFVLNAFSYNGLIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRD 84
           MR  GFVLNA+SYNGLIHLLL+S F  +AMEVY RM+ EG +PSL+TYS+LMV  GK RD
Sbjct: 181 MREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYSRMILEGFRPSLQTYSSLMVGLGKRRD 240

Query: 83  AETVMGLLEEMQSLGLRPNVYTFTICI 3
            E+VMGLL+EM++LGL+PNVYTFTICI
Sbjct: 241 IESVMGLLKEMETLGLKPNVYTFTICI 267



 Score = 57.8 bits (138), Expect = 6e-06
 Identities = 44/156 (28%), Positives = 74/156 (47%), Gaps = 1/156 (0%)
 Frame = -1

Query: 467  QPNIVHTTESCNYMLELLRGQRRVEE-MAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGI 291
            +PNI+    + N +L  L     V+E + + +DL+  +       TY  +  GL   G +
Sbjct: 854  EPNII----THNIVLSGLVKAGNVDEALDLYYDLISDRDFSPTACTYGPLIDGLSKSGRL 909

Query: 290  RQAPLALENMRRAGFVLNAFSYNGLIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSAL 111
             +A    E M   G   N   YN LI+   ++G    A  +++RMV EG++P LKTYS L
Sbjct: 910  YEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVL 969

Query: 110  MVASGKIRDAETVMGLLEEMQSLGLRPNVYTFTICI 3
            +     +   +  +    E++  GL P+V  + + I
Sbjct: 970  VDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLII 1005


>ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
           gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g31850, chloroplastic; AltName: Full=Protein PROTON
           GRADIENT REGULATION 3; Flags: Precursor
           gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis
           thaliana] gi|7270088|emb|CAB79903.1| putative protein
           [Arabidopsis thaliana] gi|332660567|gb|AEE85967.1|
           proton gradient regulation 3 [Arabidopsis thaliana]
          Length = 1112

 Score =  240 bits (613), Expect = 5e-61
 Identities = 131/217 (60%), Positives = 162/217 (74%), Gaps = 4/217 (1%)
 Frame = -1

Query: 641 KKHGKKNVGFCGFV-MKSS--FERVVKGKTKNGLSS-DEVIETLKSITDPIEALSFFQSV 474
           KKH ++    C  V MKSS     +++  +K  LSS +EV   LKS  D   + S+F+SV
Sbjct: 49  KKHWRRKSMRCSVVSMKSSDFSGSMIRKSSKPDLSSSEEVTRGLKSFPDTDSSFSYFKSV 108

Query: 473 ARQPNIVHTTESCNYMLELLRGQRRVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGG 294
           A   N+VHTTE+CNYMLE LR   ++EEMA VFDLMQK+IIKR+  TYL IFK L V GG
Sbjct: 109 AGNLNLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGG 168

Query: 293 IRQAPLALENMRRAGFVLNAFSYNGLIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSA 114
           ++QAP AL  MR  GFVLNA+SYNGLIHLLL+S F  +AMEVYRRM+ EG +PSL+TYS+
Sbjct: 169 LKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSS 228

Query: 113 LMVASGKIRDAETVMGLLEEMQSLGLRPNVYTFTICI 3
           LMV  GK RD ++VMGLL+EM++LGL+PNVYTFTICI
Sbjct: 229 LMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICI 265



 Score = 57.8 bits (138), Expect = 6e-06
 Identities = 37/131 (28%), Positives = 63/131 (48%)
 Frame = -1

Query: 395  EEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNGL 216
            + + + +DLM  +       TY  +  GL   G + +A    E M   G   N   YN L
Sbjct: 873  DALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNIL 932

Query: 215  IHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDAETVMGLLEEMQSLGL 36
            I+   ++G    A  +++RMV EG++P LKTYS L+     +   +  +   +E++  GL
Sbjct: 933  INGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGL 992

Query: 35   RPNVYTFTICI 3
             P+V  + + I
Sbjct: 993  NPDVVCYNLII 1003