BLASTX nr result
ID: Akebia26_contig00016268
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia26_contig00016268
(368 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_006666139.1| cytochrome c oxidase subunit II (mitochondri... 114 1e-23
ref|YP_004222255.1| hypothetical protein BevumaM_p016 [Beta vulg... 94 2e-17
dbj|BAD66739.1| cytochrome oxidase subunit 2 [Beta vulgaris subs... 94 2e-17
dbj|BAD66783.1| cytochrome oxidase subunit 2 [Beta vulgaris subs... 94 2e-17
ref|YP_003587242.1| cytochrome c oxidase subunit 2 [Citrullus la... 94 3e-17
gb|ABV23661.1| cytochrome oxidase subunit 2 [Boehmeria nivea] gi... 92 7e-17
emb|CAA06892.1| cytochrome oxidase subunit II [Acorus calamus] 91 2e-16
ref|YP_005090429.1| cox2 gene product (mitochondrion) [Boea hygr... 90 3e-16
emb|CAA40875.1| NcoxII [Beta vulgaris subsp. vulgaris] gi|11269|... 90 4e-16
gb|AFZ85273.1| cytochrome c oxidase subunit 2 (mitochondrion) [G... 90 4e-16
sp|P98012.1|COX2_BETVU RecName: Full=Cytochrome c oxidase subuni... 90 4e-16
dbj|BAI82399.1| cytochrome c oxidase subunit 2 [Beta vulgaris su... 90 4e-16
emb|CAA40877.1| ScoxII [Beta vulgaris subsp. vulgaris] 90 4e-16
gb|AAK82658.1|AF276430_1 truncated cytochrome c oxidase subunit ... 90 4e-16
gb|AEI98735.1| cytochrome oxidase subunit II [Rubus coreanus] 89 5e-16
ref|YP_003587351.1| cytochrome c oxidase subunit 2 [Cucurbita pe... 89 6e-16
gb|AHC94288.1| cytochrome c oxidase subunit 2, partial (mitochon... 88 1e-15
gb|AHA47116.1| cytochrome c oxidase subunit 2 (mitochondrion) [A... 88 1e-15
emb|CAD20888.1| cytochrome oxidase subunit 2 [Ruscus aculeatus] 88 1e-15
ref|YP_005090502.1| cytochrome c oxidase subunit 2 (mitochondrio... 88 1e-15
>ref|YP_006666139.1| cytochrome c oxidase subunit II (mitochondrion) [Malus domestica]
gi|401661942|emb|CBX33403.1| cox2 (mitochondrion) [Malus
domestica]
Length = 306
Score = 114 bits (286), Expect = 1e-23
Identities = 63/104 (60%), Positives = 69/104 (66%), Gaps = 1/104 (0%)
Frame = -3
Query: 360 VFLGWTTQPATLGQVSLFYLWG-AEQSKNEPNQMIVLEWLFLTIAPCDAAEPWQLGFQDA 184
VFL W ++ SLF+ WG AEQ KNEP QMIVLEWLFLTI PCDAAEPWQLGFQDA
Sbjct: 19 VFLNWESK-----NKSLFFFWGGAEQLKNEPTQMIVLEWLFLTIVPCDAAEPWQLGFQDA 73
Query: 183 ATPMMQGXXXXXXXXXXXXXXXLVFVSWMLVRALWLWWIHHMRN 52
ATPMMQG LVFVS +LVRA LW H+ +N
Sbjct: 74 ATPMMQGIMDLHHDIFFFLILILVFVSRILVRA--LWHFHYKKN 115
>ref|YP_004222255.1| hypothetical protein BevumaM_p016 [Beta vulgaris subsp. maritima]
gi|346683133|ref|YP_004842062.1| hypothetical protein
BemaM_p014 [Beta macrocarpa]
gi|317905693|emb|CBX33235.1| hypothetical protein [Beta
vulgaris subsp. maritima] gi|319439773|emb|CBX33287.1|
hypothetical protein [Beta vulgaris subsp. maritima]
gi|320148025|emb|CBJ20690.1| hypothetical protein [Beta
vulgaris subsp. maritima] gi|345500051|emb|CBX24867.1|
hypothetical protein [Beta macrocarpa]
gi|384939217|emb|CBL52063.1| hypothetical protein
(mitochondrion) [Beta vulgaris subsp. maritima]
Length = 178
Score = 94.0 bits (232), Expect = 2e-17
Identities = 47/73 (64%), Positives = 51/73 (69%)
Frame = -3
Query: 270 NQMIVLEWLFLTIAPCDAAEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXLVFVSWMLV 91
NQMIV EWLF T+APCDAAEPWQLGFQDAATPMMQG LVFVSW+LV
Sbjct: 2 NQMIVREWLFFTMAPCDAAEPWQLGFQDAATPMMQGIIDLHHDIFFFLILILVFVSWILV 61
Query: 90 RALWLWWIHHMRN 52
RA LW H+ +N
Sbjct: 62 RA--LWHFHYKKN 72
>dbj|BAD66739.1| cytochrome oxidase subunit 2 [Beta vulgaris subsp. vulgaris]
Length = 263
Score = 94.0 bits (232), Expect = 2e-17
Identities = 47/73 (64%), Positives = 51/73 (69%)
Frame = -3
Query: 270 NQMIVLEWLFLTIAPCDAAEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXLVFVSWMLV 91
NQMIV EWLF T+APCDAAEPWQLGFQDAATPMMQG LVFVSW+LV
Sbjct: 2 NQMIVREWLFFTMAPCDAAEPWQLGFQDAATPMMQGIIDLHHDIFFFLILILVFVSWILV 61
Query: 90 RALWLWWIHHMRN 52
RA LW H+ +N
Sbjct: 62 RA--LWHFHYKKN 72
>dbj|BAD66783.1| cytochrome oxidase subunit 2 [Beta vulgaris subsp. vulgaris]
Length = 364
Score = 94.0 bits (232), Expect = 2e-17
Identities = 47/73 (64%), Positives = 51/73 (69%)
Frame = -3
Query: 270 NQMIVLEWLFLTIAPCDAAEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXLVFVSWMLV 91
NQMIV EWLF T+APCDAAEPWQLGFQDAATPMMQG LVFVSW+LV
Sbjct: 2 NQMIVREWLFFTMAPCDAAEPWQLGFQDAATPMMQGIIDLHHDIFFFLILILVFVSWILV 61
Query: 90 RALWLWWIHHMRN 52
RA LW H+ +N
Sbjct: 62 RA--LWHFHYKKN 72
>ref|YP_003587242.1| cytochrome c oxidase subunit 2 [Citrullus lanatus]
gi|259156768|gb|ACV96630.1| cytochrome c oxidase subunit
2 [Citrullus lanatus]
Length = 260
Score = 93.6 bits (231), Expect = 3e-17
Identities = 46/71 (64%), Positives = 50/71 (70%)
Frame = -3
Query: 264 MIVLEWLFLTIAPCDAAEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXLVFVSWMLVRA 85
MIVL+WLFLTIAPCDAAEPWQLGFQDAATPMMQG VFVSW+LVRA
Sbjct: 1 MIVLKWLFLTIAPCDAAEPWQLGFQDAATPMMQGIIDLHHDIFFFLILIFVFVSWILVRA 60
Query: 84 LWLWWIHHMRN 52
LW H+ +N
Sbjct: 61 --LWHFHYQKN 69
>gb|ABV23661.1| cytochrome oxidase subunit 2 [Boehmeria nivea]
gi|157102084|gb|ABV23662.1| cytochrome oxidase subunit 2
[Boehmeria nivea] gi|157102086|gb|ABV23663.1| cytochrome
oxidase subunit 2 [Boehmeria nivea]
Length = 310
Score = 92.0 bits (227), Expect = 7e-17
Identities = 49/82 (59%), Positives = 57/82 (69%)
Frame = -3
Query: 297 GAEQSKNEPNQMIVLEWLFLTIAPCDAAEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXX 118
GAEQSK++P +MI+ LFLTI+PCDAAEPWQLGFQDAATPMMQG
Sbjct: 22 GAEQSKSKPQKMIL--GLFLTISPCDAAEPWQLGFQDAATPMMQGIIDLHHDIFFFLILI 79
Query: 117 LVFVSWMLVRALWLWWIHHMRN 52
LVFV W+LVRA LW H+ +N
Sbjct: 80 LVFVLWILVRA--LWHFHYQKN 99
>emb|CAA06892.1| cytochrome oxidase subunit II [Acorus calamus]
Length = 253
Score = 90.5 bits (223), Expect = 2e-16
Identities = 45/62 (72%), Positives = 45/62 (72%)
Frame = -3
Query: 264 MIVLEWLFLTIAPCDAAEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXLVFVSWMLVRA 85
MIV EWLFLTIAPCDAAEPWQLGFQDAATPMMQG LVFV WMLVRA
Sbjct: 1 MIVHEWLFLTIAPCDAAEPWQLGFQDAATPMMQGITDLHHDIFFFLILILVFVLWMLVRA 60
Query: 84 LW 79
LW
Sbjct: 61 LW 62
>ref|YP_005090429.1| cox2 gene product (mitochondrion) [Boea hygrometrica]
gi|340549488|gb|AEK53309.1| cytochrome c oxidase subunit
2 (mitochondrion) [Boea hygrometrica]
Length = 261
Score = 90.1 bits (222), Expect = 3e-16
Identities = 45/71 (63%), Positives = 48/71 (67%)
Frame = -3
Query: 264 MIVLEWLFLTIAPCDAAEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXLVFVSWMLVRA 85
MIVLEWLF TIAPCDAAEPWQLG QDAATPMMQG VFVSW+LVRA
Sbjct: 1 MIVLEWLFFTIAPCDAAEPWQLGSQDAATPMMQGIIDLHHDIFFFLILIFVFVSWILVRA 60
Query: 84 LWLWWIHHMRN 52
LW H+ +N
Sbjct: 61 --LWHFHYKKN 69
>emb|CAA40875.1| NcoxII [Beta vulgaris subsp. vulgaris] gi|11269|emb|CAA40876.1|
ScoxII [Beta vulgaris subsp. vulgaris]
Length = 260
Score = 89.7 bits (221), Expect = 4e-16
Identities = 45/71 (63%), Positives = 49/71 (69%)
Frame = -3
Query: 264 MIVLEWLFLTIAPCDAAEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXLVFVSWMLVRA 85
MIV EWLF T+APCDAAEPWQLGFQDAATPMMQG LVFVSW+LVRA
Sbjct: 1 MIVREWLFFTMAPCDAAEPWQLGFQDAATPMMQGIIDLHHDIFFFLILILVFVSWILVRA 60
Query: 84 LWLWWIHHMRN 52
LW H+ +N
Sbjct: 61 --LWHFHYKKN 69
>gb|AFZ85273.1| cytochrome c oxidase subunit 2 (mitochondrion) [Gossypium hirsutum]
gi|429465287|gb|AFZ85274.1| cytochrome c oxidase subunit
2 (mitochondrion) [Gossypium hirsutum]
gi|429465290|gb|AFZ85275.1| cytochrome c oxidase subunit
2 (mitochondrion) [Gossypium hirsutum]
Length = 260
Score = 89.7 bits (221), Expect = 4e-16
Identities = 46/71 (64%), Positives = 49/71 (69%)
Frame = -3
Query: 264 MIVLEWLFLTIAPCDAAEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXLVFVSWMLVRA 85
MIVLEWLFLTIA CDAAEPWQLGFQDAATPMMQG LVFV W+LVRA
Sbjct: 1 MIVLEWLFLTIAACDAAEPWQLGFQDAATPMMQGIIDLHHDIFFFLILILVFVLWILVRA 60
Query: 84 LWLWWIHHMRN 52
LW H+ +N
Sbjct: 61 --LWHFHYQKN 69
>sp|P98012.1|COX2_BETVU RecName: Full=Cytochrome c oxidase subunit 2; AltName:
Full=Cytochrome c oxidase polypeptide II
gi|11261|emb|CAA39009.1| cytochrome oxidase subunit II
[Beta vulgaris subsp. vulgaris]
Length = 260
Score = 89.7 bits (221), Expect = 4e-16
Identities = 45/71 (63%), Positives = 49/71 (69%)
Frame = -3
Query: 264 MIVLEWLFLTIAPCDAAEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXLVFVSWMLVRA 85
MIV EWLF T+APCDAAEPWQLGFQDAATPMMQG LVFVSW+LVRA
Sbjct: 1 MIVREWLFFTMAPCDAAEPWQLGFQDAATPMMQGIIDLHHDIFFFLILILVFVSWILVRA 60
Query: 84 LWLWWIHHMRN 52
LW H+ +N
Sbjct: 61 --LWHFHYKKN 69
>dbj|BAI82399.1| cytochrome c oxidase subunit 2 [Beta vulgaris subsp. maritima]
Length = 252
Score = 89.7 bits (221), Expect = 4e-16
Identities = 45/71 (63%), Positives = 49/71 (69%)
Frame = -3
Query: 264 MIVLEWLFLTIAPCDAAEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXLVFVSWMLVRA 85
MIV EWLF T+APCDAAEPWQLGFQDAATPMMQG LVFVSW+LVRA
Sbjct: 1 MIVREWLFFTMAPCDAAEPWQLGFQDAATPMMQGIIDLHHDIFFFLILILVFVSWILVRA 60
Query: 84 LWLWWIHHMRN 52
LW H+ +N
Sbjct: 61 --LWHFHYKKN 69
>emb|CAA40877.1| ScoxII [Beta vulgaris subsp. vulgaris]
Length = 361
Score = 89.7 bits (221), Expect = 4e-16
Identities = 45/71 (63%), Positives = 49/71 (69%)
Frame = -3
Query: 264 MIVLEWLFLTIAPCDAAEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXLVFVSWMLVRA 85
MIV EWLF T+APCDAAEPWQLGFQDAATPMMQG LVFVSW+LVRA
Sbjct: 1 MIVREWLFFTMAPCDAAEPWQLGFQDAATPMMQGIIDLHHDIFFFLILILVFVSWILVRA 60
Query: 84 LWLWWIHHMRN 52
LW H+ +N
Sbjct: 61 --LWHFHYKKN 69
>gb|AAK82658.1|AF276430_1 truncated cytochrome c oxidase subunit 2 [Beta vulgaris subsp.
maritima]
Length = 252
Score = 89.7 bits (221), Expect = 4e-16
Identities = 45/71 (63%), Positives = 49/71 (69%)
Frame = -3
Query: 264 MIVLEWLFLTIAPCDAAEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXLVFVSWMLVRA 85
MIV EWLF T+APCDAAEPWQLGFQDAATPMMQG LVFVSW+LVRA
Sbjct: 1 MIVREWLFFTMAPCDAAEPWQLGFQDAATPMMQGIIDLHHDIFFFLILILVFVSWILVRA 60
Query: 84 LWLWWIHHMRN 52
LW H+ +N
Sbjct: 61 --LWHFHYKKN 69
>gb|AEI98735.1| cytochrome oxidase subunit II [Rubus coreanus]
Length = 255
Score = 89.4 bits (220), Expect = 5e-16
Identities = 47/71 (66%), Positives = 50/71 (70%)
Frame = -3
Query: 264 MIVLEWLFLTIAPCDAAEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXLVFVSWMLVRA 85
MIVLEWLFLTIAPCDAAEPWQLGFQDAATPMMQG LVFVS +LVRA
Sbjct: 1 MIVLEWLFLTIAPCDAAEPWQLGFQDAATPMMQGIMDLHHDIFFFLILILVFVSRILVRA 60
Query: 84 LWLWWIHHMRN 52
LW H+ +N
Sbjct: 61 --LWHFHYKKN 69
>ref|YP_003587351.1| cytochrome c oxidase subunit 2 [Cucurbita pepo]
gi|259156812|gb|ACV96673.1| cytochrome c oxidase subunit
2 [Cucurbita pepo]
Length = 260
Score = 89.0 bits (219), Expect = 6e-16
Identities = 45/71 (63%), Positives = 49/71 (69%)
Frame = -3
Query: 264 MIVLEWLFLTIAPCDAAEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXLVFVSWMLVRA 85
MIVL+WLFLTIA CDAAEPWQLGFQDAATPMMQG VFVSW+LVRA
Sbjct: 1 MIVLKWLFLTIALCDAAEPWQLGFQDAATPMMQGIIDLHHDIFFFLILLFVFVSWILVRA 60
Query: 84 LWLWWIHHMRN 52
LW H+ +N
Sbjct: 61 --LWHFHYKQN 69
>gb|AHC94288.1| cytochrome c oxidase subunit 2, partial (mitochondrion) [Amborella
trichopoda]
Length = 231
Score = 88.2 bits (217), Expect = 1e-15
Identities = 46/71 (64%), Positives = 48/71 (67%)
Frame = -3
Query: 264 MIVLEWLFLTIAPCDAAEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXLVFVSWMLVRA 85
MI LEWLFLTIA CDAAEPWQLGFQDAATPMMQG LVFV WMLVRA
Sbjct: 1 MIFLEWLFLTIALCDAAEPWQLGFQDAATPMMQGIIDLHHDIFFFLILILVFVLWMLVRA 60
Query: 84 LWLWWIHHMRN 52
LW H+ +N
Sbjct: 61 --LWHFHYKKN 69
>gb|AHA47116.1| cytochrome c oxidase subunit 2 (mitochondrion) [Amborella
trichopoda]
Length = 255
Score = 88.2 bits (217), Expect = 1e-15
Identities = 46/71 (64%), Positives = 48/71 (67%)
Frame = -3
Query: 264 MIVLEWLFLTIAPCDAAEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXLVFVSWMLVRA 85
MI LEWLFLTIA CDAAEPWQLGFQDAATPMMQG LVFV WMLVRA
Sbjct: 1 MIFLEWLFLTIALCDAAEPWQLGFQDAATPMMQGIIDLHHDIFFFLILILVFVLWMLVRA 60
Query: 84 LWLWWIHHMRN 52
LW H+ +N
Sbjct: 61 --LWHFHYKKN 69
>emb|CAD20888.1| cytochrome oxidase subunit 2 [Ruscus aculeatus]
Length = 258
Score = 87.8 bits (216), Expect = 1e-15
Identities = 43/64 (67%), Positives = 45/64 (70%)
Frame = -3
Query: 264 MIVLEWLFLTIAPCDAAEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXLVFVSWMLVRA 85
MIVL+WLF TIA CDAAEPWQLGFQDAATPMMQG LVFV W+LVRA
Sbjct: 1 MIVLKWLFFTIALCDAAEPWQLGFQDAATPMMQGIIDLHHDIFFFLILILVFVLWILVRA 60
Query: 84 LWLW 73
LW W
Sbjct: 61 LWHW 64
>ref|YP_005090502.1| cytochrome c oxidase subunit 2 (mitochondrion) [Lotus japonicus]
gi|357197366|gb|AET62962.1| cytochrome c oxidase subunit
2 (mitochondrion) [Lotus japonicus]
Length = 257
Score = 87.8 bits (216), Expect = 1e-15
Identities = 44/68 (64%), Positives = 47/68 (69%)
Frame = -3
Query: 255 LEWLFLTIAPCDAAEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXLVFVSWMLVRALWL 76
LEWLFLTIAPCDAAEPWQLGFQDAATPMMQG LVFV W+LVRA L
Sbjct: 3 LEWLFLTIAPCDAAEPWQLGFQDAATPMMQGIIDLHHDIFFFLILILVFVLWILVRA--L 60
Query: 75 WWIHHMRN 52
W H+ +N
Sbjct: 61 WHFHYQKN 68