BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia26_contig00014811
         (396 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004298102.1| PREDICTED: pentatricopeptide repeat-containi...    59   9e-07
ref|XP_006491812.1| PREDICTED: pentatricopeptide repeat-containi...    58   2e-06
ref|XP_006491807.1| PREDICTED: pentatricopeptide repeat-containi...    58   2e-06
ref|XP_002519997.1| pentatricopeptide repeat-containing protein,...    58   2e-06

>ref|XP_004298102.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 1496

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 28/52 (53%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
 Frame = +2

Query: 215 NTHKFSYSRASPSVRWPHLKLTED-PSPPQTQLIISSPSIQQVFIDSDVEDQ 367
           N +KFSYSRASPSVRWPHLKL+E  PS P T +++          DSD E +
Sbjct: 65  NNNKFSYSRASPSVRWPHLKLSETYPSAPHTPVVVEDAGFSAQLSDSDSESK 116


>ref|XP_006491812.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
           chloroplastic-like isoform X6 [Citrus sinensis]
          Length = 1278

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 26/31 (83%), Positives = 26/31 (83%)
 Frame = +2

Query: 215 NTHKFSYSRASPSVRWPHLKLTEDPSPPQTQ 307
           NTH FSYSRASPSVRWPHLKL E   PPQTQ
Sbjct: 54  NTHNFSYSRASPSVRWPHLKLNELYPPPQTQ 84


>ref|XP_006491807.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
           chloroplastic-like isoform X1 [Citrus sinensis]
           gi|568877582|ref|XP_006491808.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g18110,
           chloroplastic-like isoform X2 [Citrus sinensis]
           gi|568877584|ref|XP_006491809.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g18110,
           chloroplastic-like isoform X3 [Citrus sinensis]
           gi|568877586|ref|XP_006491810.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g18110,
           chloroplastic-like isoform X4 [Citrus sinensis]
           gi|568877588|ref|XP_006491811.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g18110,
           chloroplastic-like isoform X5 [Citrus sinensis]
          Length = 1459

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 26/31 (83%), Positives = 26/31 (83%)
 Frame = +2

Query: 215 NTHKFSYSRASPSVRWPHLKLTEDPSPPQTQ 307
           NTH FSYSRASPSVRWPHLKL E   PPQTQ
Sbjct: 54  NTHNFSYSRASPSVRWPHLKLNELYPPPQTQ 84


>ref|XP_002519997.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540761|gb|EEF42321.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1429

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 28/53 (52%), Positives = 39/53 (73%), Gaps = 3/53 (5%)
 Frame = +2

Query: 224 KFSYSRASPSVRWPHLKLTEDPSPPQTQLIISSPSIQQVF---IDSDVEDQNP 373
           KFSYSRASPS+RWPHLKL++  + P TQ  I+SPS  Q F    +S+ ++++P
Sbjct: 16  KFSYSRASPSIRWPHLKLSDSCTSPHTQFHIASPSPTQFFDEMPESESDNKSP 68