BLASTX nr result

ID: Akebia26_contig00014592 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia26_contig00014592
         (421 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531488.1| serine/arginine rich splicing factor, putati...    69   9e-10
ref|XP_007042969.1| Serine/arginine rich splicing factor, putati...    65   1e-08
ref|XP_007042967.1| Serine/arginine rich splicing factor, putati...    65   1e-08
ref|XP_002285794.1| PREDICTED: uncharacterized protein LOC100243...    64   2e-08

>ref|XP_002531488.1| serine/arginine rich splicing factor, putative [Ricinus communis]
           gi|223528897|gb|EEF30895.1| serine/arginine rich
           splicing factor, putative [Ricinus communis]
          Length = 257

 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 49/124 (39%), Positives = 53/124 (42%), Gaps = 2/124 (1%)
 Frame = -2

Query: 369 DRNYRSRSRSKXXXXXXXXXXXXXXXXXR--SRSPSVSPDYRKGRGHRRYDDERQKXXXX 196
           DR+YR RSRSK                 R  SRS S SPDY +GRG  RYDDER+     
Sbjct: 132 DRDYRKRSRSKSLDRHERDKYRGRERDYRRQSRSRSASPDYSRGRGRGRYDDERRSSSRS 191

Query: 195 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDKRSRDKSSPTPRSVSPPIGTAVSRSPSP 16
                                          D+RSRD  SPTPRS SP      SRSPSP
Sbjct: 192 MGSASPARRSPSPRRSRSPLKNSPPKGASP-DRRSRDGRSPTPRSASPHGRAPASRSPSP 250

Query: 15  HNSD 4
            NSD
Sbjct: 251 RNSD 254


>ref|XP_007042969.1| Serine/arginine rich splicing factor, putative isoform 3 [Theobroma
           cacao] gi|590688515|ref|XP_007042971.1| Serine/arginine
           rich splicing factor, putative isoform 3 [Theobroma
           cacao] gi|508706904|gb|EOX98800.1| Serine/arginine rich
           splicing factor, putative isoform 3 [Theobroma cacao]
           gi|508706906|gb|EOX98802.1| Serine/arginine rich
           splicing factor, putative isoform 3 [Theobroma cacao]
          Length = 257

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 49/124 (39%), Positives = 55/124 (44%), Gaps = 2/124 (1%)
 Frame = -2

Query: 369 DRNYR--SRSRSKXXXXXXXXXXXXXXXXXRSRSPSVSPDYRKGRGHRRYDDERQKXXXX 196
           DR+YR  SRSRS                  RSRS S SPDY KGRG  RYDD+R+     
Sbjct: 133 DRDYRRRSRSRSYDRHERDRYRGKDKDYRRRSRSRSASPDYSKGRGRGRYDDDRRS--SS 190

Query: 195 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDKRSRDKSSPTPRSVSPPIGTAVSRSPSP 16
                                         PD+ SRD  +P+PRSVSP    A SRSPSP
Sbjct: 191 RSMSASPARRSVSPRKSPSPRKASPPRGGSPDRHSRDGRTPSPRSVSPRGRPAESRSPSP 250

Query: 15  HNSD 4
            NSD
Sbjct: 251 RNSD 254


>ref|XP_007042967.1| Serine/arginine rich splicing factor, putative isoform 1 [Theobroma
           cacao] gi|590688506|ref|XP_007042968.1| Serine/arginine
           rich splicing factor, putative isoform 1 [Theobroma
           cacao] gi|590688512|ref|XP_007042970.1| Serine/arginine
           rich splicing factor, putative isoform 1 [Theobroma
           cacao] gi|508706902|gb|EOX98798.1| Serine/arginine rich
           splicing factor, putative isoform 1 [Theobroma cacao]
           gi|508706903|gb|EOX98799.1| Serine/arginine rich
           splicing factor, putative isoform 1 [Theobroma cacao]
           gi|508706905|gb|EOX98801.1| Serine/arginine rich
           splicing factor, putative isoform 1 [Theobroma cacao]
          Length = 268

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 49/124 (39%), Positives = 55/124 (44%), Gaps = 2/124 (1%)
 Frame = -2

Query: 369 DRNYR--SRSRSKXXXXXXXXXXXXXXXXXRSRSPSVSPDYRKGRGHRRYDDERQKXXXX 196
           DR+YR  SRSRS                  RSRS S SPDY KGRG  RYDD+R+     
Sbjct: 144 DRDYRRRSRSRSYDRHERDRYRGKDKDYRRRSRSRSASPDYSKGRGRGRYDDDRRS--SS 201

Query: 195 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDKRSRDKSSPTPRSVSPPIGTAVSRSPSP 16
                                         PD+ SRD  +P+PRSVSP    A SRSPSP
Sbjct: 202 RSMSASPARRSVSPRKSPSPRKASPPRGGSPDRHSRDGRTPSPRSVSPRGRPAESRSPSP 261

Query: 15  HNSD 4
            NSD
Sbjct: 262 RNSD 265


>ref|XP_002285794.1| PREDICTED: uncharacterized protein LOC100243776 [Vitis vinifera]
           gi|302141951|emb|CBI19154.3| unnamed protein product
           [Vitis vinifera]
          Length = 257

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 47/125 (37%), Positives = 55/125 (44%), Gaps = 2/125 (1%)
 Frame = -2

Query: 369 DRNYR--SRSRSKXXXXXXXXXXXXXXXXXRSRSPSVSPDYRKGRGHRRYDDERQKXXXX 196
           DR+YR  SRSRS+                 RSRS S SPD+ K RG  RYDDER+     
Sbjct: 132 DRDYRKRSRSRSRGRNDRDRYRGKERDSRRRSRSRSASPDHHKDRGRGRYDDERRSRSRS 191

Query: 195 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDKRSRDKSSPTPRSVSPPIGTAVSRSPSP 16
                                            R R++ SPTP+SVSP    A SRSPSP
Sbjct: 192 YGSASPARRSPSPRGSPSPRRTPPSREESPVG-RKRNERSPTPKSVSPRGRPADSRSPSP 250

Query: 15  HNSDS 1
           HNSD+
Sbjct: 251 HNSDA 255


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