BLASTX nr result

ID: Akebia26_contig00014103 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia26_contig00014103
         (1248 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319325.1| zinc finger family protein [Populus trichoca...    46   1e-08

>ref|XP_002319325.1| zinc finger family protein [Populus trichocarpa]
           gi|222857701|gb|EEE95248.1| zinc finger family protein
           [Populus trichocarpa]
          Length = 276

 Score = 46.2 bits (108), Expect(2) = 1e-08
 Identities = 43/139 (30%), Positives = 58/139 (41%), Gaps = 60/139 (43%)
 Frame = -3

Query: 544 VYLQEQLVPVVWRLISSLDHVSQLGFKDCGS----------------------------- 452
           + +QEQLVPV+ RLI+SL+HVS  G+    S                             
Sbjct: 109 INIQEQLVPVIHRLITSLEHVSSNGWAGESSSSDNLGLSPSPVNANGQIEVVSSTKAPLL 168

Query: 451 -----EDRRRS-----------------STNWGIKIDVATPE---------AISLQKGLS 365
                +D+R+S                 ST+ G K+D  T +         +ISLQK L 
Sbjct: 169 GKSNKQDKRKSKDHVITIRDIELEEHRKSTDRGAKLDSTTLDSNNQAGVGSSISLQKDLG 228

Query: 364 SMRIRMSSQYARRM*WCKV 308
           SMRIR SSQ  R+  W +V
Sbjct: 229 SMRIRTSSQSIRKKWWRQV 247



 Score = 41.2 bits (95), Expect(2) = 1e-08
 Identities = 18/30 (60%), Positives = 23/30 (76%)
 Frame = -1

Query: 645 TIMNEGFGKRGVLQFLQQVRDEFKIILKNG 556
           TI++EG G  GVLQFL+ VRDEFK + + G
Sbjct: 69  TIVDEGLGNPGVLQFLEHVRDEFKKVARKG 98


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