BLASTX nr result

ID: Akebia26_contig00014090 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia26_contig00014090
         (259 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004287141.1| PREDICTED: F-box protein SKIP1-like [Fragari...    57   2e-06
gb|ACJ84674.1| unknown [Medicago truncatula] gi|388515861|gb|AFK...    57   3e-06
ref|XP_003610294.1| F-box protein SKIP1 [Medicago truncatula] gi...    57   3e-06
ref|XP_004507751.1| PREDICTED: F-box protein SKIP1-like [Cicer a...    55   8e-06
ref|XP_002325124.1| SKP1 INTERACTING PARTNER 1 family protein [P...    55   8e-06
ref|XP_007202327.1| hypothetical protein PRUPE_ppa009141mg [Prun...    55   1e-05

>ref|XP_004287141.1| PREDICTED: F-box protein SKIP1-like [Fragaria vesca subsp. vesca]
          Length = 309

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 26/35 (74%), Positives = 29/35 (82%)
 Frame = +3

Query: 153 RCANLQVLSIKSCPNVTDTSIAKIASGCPMLSELD 257
           RC NL+VLSIKSCPNVTD S+A IA  CPM+ ELD
Sbjct: 119 RCPNLEVLSIKSCPNVTDASMADIAFRCPMIKELD 153


>gb|ACJ84674.1| unknown [Medicago truncatula] gi|388515861|gb|AFK45992.1| unknown
           [Medicago truncatula]
          Length = 302

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 25/35 (71%), Positives = 30/35 (85%)
 Frame = +3

Query: 153 RCANLQVLSIKSCPNVTDTSIAKIASGCPMLSELD 257
           RC NL+VLSI+SCP VTD S++KIA+GCP L ELD
Sbjct: 112 RCPNLEVLSIRSCPRVTDDSMSKIATGCPNLRELD 146


>ref|XP_003610294.1| F-box protein SKIP1 [Medicago truncatula]
           gi|355511349|gb|AES92491.1| F-box protein SKIP1
           [Medicago truncatula]
          Length = 302

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 25/35 (71%), Positives = 30/35 (85%)
 Frame = +3

Query: 153 RCANLQVLSIKSCPNVTDTSIAKIASGCPMLSELD 257
           RC NL+VLSI+SCP VTD S++KIA+GCP L ELD
Sbjct: 112 RCPNLEVLSIRSCPRVTDDSMSKIATGCPNLRELD 146


>ref|XP_004507751.1| PREDICTED: F-box protein SKIP1-like [Cicer arietinum]
          Length = 300

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 25/35 (71%), Positives = 29/35 (82%)
 Frame = +3

Query: 153 RCANLQVLSIKSCPNVTDTSIAKIASGCPMLSELD 257
           RC NL+VLSI+SCP VTD SI++IA GCP L ELD
Sbjct: 110 RCPNLEVLSIRSCPRVTDDSISRIAFGCPNLRELD 144


>ref|XP_002325124.1| SKP1 INTERACTING PARTNER 1 family protein [Populus trichocarpa]
           gi|222866558|gb|EEF03689.1| SKP1 INTERACTING PARTNER 1
           family protein [Populus trichocarpa]
          Length = 314

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 32/62 (51%), Positives = 40/62 (64%), Gaps = 3/62 (4%)
 Frame = +3

Query: 81  IFSFKNLSPYNIFLQYIACLCCTF---RCANLQVLSIKSCPNVTDTSIAKIASGCPMLSE 251
           + +F + S   I  Q+ + L  TF   RC+NLQVLSIKSC NVTD S+A+IA  C  L E
Sbjct: 97  VITFSDGSLTEIRTQHCSDLSVTFAAERCSNLQVLSIKSCRNVTDASMAQIAYKCAKLKE 156

Query: 252 LD 257
           LD
Sbjct: 157 LD 158


>ref|XP_007202327.1| hypothetical protein PRUPE_ppa009141mg [Prunus persica]
           gi|462397858|gb|EMJ03526.1| hypothetical protein
           PRUPE_ppa009141mg [Prunus persica]
          Length = 305

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 25/35 (71%), Positives = 29/35 (82%)
 Frame = +3

Query: 153 RCANLQVLSIKSCPNVTDTSIAKIASGCPMLSELD 257
           RC NL+VLSIK CPNVTD+S+A IA  CPM+ ELD
Sbjct: 115 RCPNLEVLSIKCCPNVTDSSMADIAFRCPMILELD 149


Top