BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia26_contig00011948
         (1444 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311995.2| hypothetical protein POPTR_0008s03540g [Popu...   464   e-128
ref|XP_007218062.1| hypothetical protein PRUPE_ppa006826mg [Prun...   462   e-127
ref|XP_004250054.1| PREDICTED: uncharacterized RNA pseudouridine...   461   e-127
ref|XP_002270186.1| PREDICTED: uncharacterized RNA pseudouridine...   461   e-127
ref|XP_006361680.1| PREDICTED: uncharacterized protein LOC102601...   459   e-126
ref|XP_006485600.1| PREDICTED: uncharacterized protein LOC102619...   456   e-126
ref|XP_006436494.1| hypothetical protein CICLE_v10031516mg [Citr...   456   e-126
gb|EYU32425.1| hypothetical protein MIMGU_mgv1a007390mg [Mimulus...   455   e-125
ref|XP_007009964.1| Pseudouridine synthase family protein isofor...   450   e-124
ref|XP_004308770.1| PREDICTED: uncharacterized RNA pseudouridine...   449   e-123
ref|XP_004140075.1| PREDICTED: uncharacterized RNA pseudouridine...   448   e-123
gb|EXB96209.1| putative RNA pseudouridine synthase [Morus notabi...   444   e-122
ref|XP_007009963.1| Pseudouridine synthase family protein isofor...   444   e-122
ref|XP_006411139.1| hypothetical protein EUTSA_v10016747mg [Eutr...   441   e-121
emb|CBI31423.3| unnamed protein product [Vitis vinifera]              441   e-121
ref|XP_006294188.1| hypothetical protein CARUB_v10023183mg, part...   438   e-120
ref|XP_002879786.1| pseudouridine synthase family protein [Arabi...   437   e-120
ref|XP_004496237.1| PREDICTED: uncharacterized RNA pseudouridine...   434   e-119
ref|NP_181447.2| protein SUPPRESSOR OF VARIEGATION 1 [Arabidopsi...   432   e-118
ref|XP_006848911.1| hypothetical protein AMTR_s00161p00064200 [A...   429   e-117

>ref|XP_002311995.2| hypothetical protein POPTR_0008s03540g [Populus trichocarpa]
            gi|550332354|gb|EEE89362.2| hypothetical protein
            POPTR_0008s03540g [Populus trichocarpa]
          Length = 397

 Score =  464 bits (1195), Expect = e-128
 Identities = 229/306 (74%), Positives = 251/306 (82%)
 Frame = +3

Query: 525  WIVRGEDGKLKLQSTPPVRFLHAMDXXXXXXXXXXXXXXXXXXXXXXAVLTPEPKYSKAA 704
            WIVRGEDG LKLQS PP R +HA+                       A L  EP  SKAA
Sbjct: 75   WIVRGEDGNLKLQSNPPARLIHAIADAKTQPKKKKDKVKKESSGNVKAKLEAEPTRSKAA 134

Query: 705  RRFYNQNFRDPPQRLSKVLASAGVASRRSSEELIFEGRVTVNGSVCNTPQTRVDIGKDLI 884
            RRFYN+NFRD  QRLSKVLA+AGVASRRSSE LIFEG+VTVNGSVCNTPQTRVD G+D I
Sbjct: 135  RRFYNENFRDQAQRLSKVLAAAGVASRRSSEALIFEGKVTVNGSVCNTPQTRVDPGRDAI 194

Query: 885  YVNGNRISKKLPPKVYLALNKPKGYICSSGEKESKSVFSLFDDYMKSWDKRNPGLPKPRL 1064
            YVNGNR+ KKLPPK+Y+ALNKPKGYICS GEKESKSV  L DDY +SWDKRNPGLPKPRL
Sbjct: 195  YVNGNRLPKKLPPKIYIALNKPKGYICSLGEKESKSVMCLLDDYFQSWDKRNPGLPKPRL 254

Query: 1065 FTVGRLDVGTTGLIIVTNDGDFAQRVSHPSSNLSKEYIAVIDGPVHKRHLVIISEGTLIE 1244
            FTVGRLDV TTGLIIVTNDGDFAQ+++HPSSNLSKEYIA +DG V KRHL  +SEGT+IE
Sbjct: 255  FTVGRLDVATTGLIIVTNDGDFAQQIAHPSSNLSKEYIATVDGVVSKRHLFAVSEGTVIE 314

Query: 1245 GIQCTPDFVELLPQSPDASRPRLRIVVHEGRNHEVRELVKNAGLKLHSLKRTRIGGYKLP 1424
            G++C PD VELLPQ PD  RPRLRIVVHEGRNHEVRELVKNAGL++HSLKR RIGG++LP
Sbjct: 315  GVRCVPDSVELLPQQPDRPRPRLRIVVHEGRNHEVRELVKNAGLEIHSLKRVRIGGFRLP 374

Query: 1425 SDLGLG 1442
            SDLGLG
Sbjct: 375  SDLGLG 380


>ref|XP_007218062.1| hypothetical protein PRUPE_ppa006826mg [Prunus persica]
            gi|462414524|gb|EMJ19261.1| hypothetical protein
            PRUPE_ppa006826mg [Prunus persica]
          Length = 393

 Score =  462 bits (1188), Expect = e-127
 Identities = 249/389 (64%), Positives = 282/389 (72%), Gaps = 9/389 (2%)
 Frame = +3

Query: 303  ISPSVFSKPRLSC---RNFRXXXXXXXXXXXXXXXXFG-----SSTKQTLKP-KPNPEDS 455
            +S S+FSKP LS    R                   F      S  K  LKP    P+  
Sbjct: 12   LSSSLFSKPSLSLIPIRTLPRITCSLSTSSSSSSLEFNITFAPSKPKPKLKPDSAEPDPE 71

Query: 456  SKQDQLIGXXXXXXXXXXXXXXXWIVRGEDGKLKLQSTPPVRFLHAMDXXXXXXXXXXXX 635
            +   QLI                WIVRGEDG LKLQS PP RFL A++            
Sbjct: 72   ALAGQLI--------------IPWIVRGEDGNLKLQSHPPARFLQAIETKSKTKKKKEGA 117

Query: 636  XXXXXXXXXXAVLTPEPKYSKAARRFYNQNFRDPPQRLSKVLASAGVASRRSSEELIFEG 815
                       V T EPKYSKAARRFYN+NFRD  QRLSKVLA+AGVASRRSSE+LIF+G
Sbjct: 118  EKR--------VPTAEPKYSKAARRFYNENFRDASQRLSKVLAAAGVASRRSSEQLIFDG 169

Query: 816  RVTVNGSVCNTPQTRVDIGKDLIYVNGNRISKKLPPKVYLALNKPKGYICSSGEKESKSV 995
            +VTVNGSVCNTPQ+RVD G+D+IYVNGNR+ K+LPPKVYLALNKPKGYIC+SGE  +KSV
Sbjct: 170  KVTVNGSVCNTPQSRVDPGRDIIYVNGNRLPKRLPPKVYLALNKPKGYICASGE--NKSV 227

Query: 996  FSLFDDYMKSWDKRNPGLPKPRLFTVGRLDVGTTGLIIVTNDGDFAQRVSHPSSNLSKEY 1175
             SLF+DY+K+WDKRN G+P+PRLFTVGRLDV TTGLIIVTNDGDFAQ++SHPSSNLSKEY
Sbjct: 228  LSLFEDYLKTWDKRNSGIPRPRLFTVGRLDVATTGLIIVTNDGDFAQKISHPSSNLSKEY 287

Query: 1176 IAVIDGPVHKRHLVIISEGTLIEGIQCTPDFVELLPQSPDASRPRLRIVVHEGRNHEVRE 1355
            IA I+G V KRHL+ ISEGT+IEG+ CTPD VELLPQ PD SRPRLRIVVHEGRNHEVRE
Sbjct: 288  IAAIEGVVSKRHLLAISEGTVIEGVHCTPDSVELLPQQPDMSRPRLRIVVHEGRNHEVRE 347

Query: 1356 LVKNAGLKLHSLKRTRIGGYKLPSDLGLG 1442
            LVKNAGL++HSLKR RIGG++LPSDLGLG
Sbjct: 348  LVKNAGLEIHSLKRVRIGGFRLPSDLGLG 376


>ref|XP_004250054.1| PREDICTED: uncharacterized RNA pseudouridine synthase aq_1464-like
            [Solanum lycopersicum]
          Length = 414

 Score =  461 bits (1186), Expect = e-127
 Identities = 237/347 (68%), Positives = 263/347 (75%), Gaps = 5/347 (1%)
 Frame = +3

Query: 417  KQTLKPKP-----NPEDSSKQDQLIGXXXXXXXXXXXXXXXWIVRGEDGKLKLQSTPPVR 581
            K   KP+P     NP   S  D +                 WIVR E G L LQSTPP R
Sbjct: 56   KPKTKPEPAIPIINPNSDSNSDSV---PNLDAEVGDQLYIPWIVRDEKGNLTLQSTPPAR 112

Query: 582  FLHAMDXXXXXXXXXXXXXXXXXXXXXXAVLTPEPKYSKAARRFYNQNFRDPPQRLSKVL 761
             LH M                        V TPEPK+SKAARRFYN+NFRDPPQRLSKVL
Sbjct: 113  LLHEM--ANASTGKKKKKGKEVASKAATVVPTPEPKHSKAARRFYNENFRDPPQRLSKVL 170

Query: 762  ASAGVASRRSSEELIFEGRVTVNGSVCNTPQTRVDIGKDLIYVNGNRISKKLPPKVYLAL 941
            A+AGVASRRSSEELIF+GRVTVNGSVC TPQT+VD  +D+IYVNGNR+ KKLP KVYLAL
Sbjct: 171  AAAGVASRRSSEELIFQGRVTVNGSVCKTPQTKVDPARDVIYVNGNRLPKKLPTKVYLAL 230

Query: 942  NKPKGYICSSGEKESKSVFSLFDDYMKSWDKRNPGLPKPRLFTVGRLDVGTTGLIIVTND 1121
            NKPKGYICSSGEKE+KSV SLFDD++KSWDKR+PG PKPRLFTVGRLDV TTGLIIVTND
Sbjct: 231  NKPKGYICSSGEKETKSVMSLFDDFIKSWDKRHPGQPKPRLFTVGRLDVATTGLIIVTND 290

Query: 1122 GDFAQRVSHPSSNLSKEYIAVIDGPVHKRHLVIISEGTLIEGIQCTPDFVELLPQSPDAS 1301
            G+F  ++SHPSSNLSKEYIA IDG VHKRHL+ ISEGT+I+G+ CTPD VELLP  PD S
Sbjct: 291  GEFTHQISHPSSNLSKEYIATIDGEVHKRHLIAISEGTIIDGVHCTPDNVELLPGQPDLS 350

Query: 1302 RPRLRIVVHEGRNHEVRELVKNAGLKLHSLKRTRIGGYKLPSDLGLG 1442
            RPRLRIVVHEGRNHEVRELVKNAGL+L +LKR RIGG++LP+DL LG
Sbjct: 351  RPRLRIVVHEGRNHEVRELVKNAGLQLRALKRIRIGGFRLPADLALG 397


>ref|XP_002270186.1| PREDICTED: uncharacterized RNA pseudouridine synthase aq_1464 isoform
            1 [Vitis vinifera]
          Length = 393

 Score =  461 bits (1185), Expect = e-127
 Identities = 240/385 (62%), Positives = 282/385 (73%)
 Frame = +3

Query: 288  FSSFHISPSVFSKPRLSCRNFRXXXXXXXXXXXXXXXXFGSSTKQTLKPKPNPEDSSKQD 467
            FSSFH+S     +P L+ R+FR                  +S +  +   P  ++   Q 
Sbjct: 19   FSSFHLS-----RPSLARRHFRTIPVRSSISPPST-----TSAEFNISFAPKSKNPKPQS 68

Query: 468  QLIGXXXXXXXXXXXXXXXWIVRGEDGKLKLQSTPPVRFLHAMDXXXXXXXXXXXXXXXX 647
            + +                WIVR E+G L++QSTPP R+L  M                 
Sbjct: 69   ETL-------------LIPWIVRDENGNLRVQSTPPERYLQDM----AKAKALSAKKKKK 111

Query: 648  XXXXXXAVLTPEPKYSKAARRFYNQNFRDPPQRLSKVLASAGVASRRSSEELIFEGRVTV 827
                    +  EPKYSKAARRFYN+NFRDPPQRLSKVLA+AGVASRR+SEELIFEGRVTV
Sbjct: 112  KEESTARAVAVEPKYSKAARRFYNENFRDPPQRLSKVLAAAGVASRRNSEELIFEGRVTV 171

Query: 828  NGSVCNTPQTRVDIGKDLIYVNGNRISKKLPPKVYLALNKPKGYICSSGEKESKSVFSLF 1007
            NGSVCNTPQTRVD  +D+IYVNGNR+ KKLPPKVYLALNKPKGYICSSGEKESKSV  LF
Sbjct: 172  NGSVCNTPQTRVDPARDMIYVNGNRLPKKLPPKVYLALNKPKGYICSSGEKESKSVLCLF 231

Query: 1008 DDYMKSWDKRNPGLPKPRLFTVGRLDVGTTGLIIVTNDGDFAQRVSHPSSNLSKEYIAVI 1187
            DDY+KSW+K+NPG+PKPR+FTVGRLDV TTGLII+TNDGDFAQ++SHPSS LSKEYIA I
Sbjct: 232  DDYLKSWNKQNPGVPKPRIFTVGRLDVATTGLIILTNDGDFAQKLSHPSSKLSKEYIATI 291

Query: 1188 DGPVHKRHLVIISEGTLIEGIQCTPDFVELLPQSPDASRPRLRIVVHEGRNHEVRELVKN 1367
            DG V+KRHL+ ISEGT+IEG+ CTPD VELLP  P+ S+PRLR+VVHEGRNHEVRELVK+
Sbjct: 292  DGVVNKRHLIAISEGTVIEGVHCTPDSVELLPPQPNISKPRLRVVVHEGRNHEVRELVKS 351

Query: 1368 AGLKLHSLKRTRIGGYKLPSDLGLG 1442
            AGL++HSLKR RIGG++LPSDLG G
Sbjct: 352  AGLQIHSLKRIRIGGFRLPSDLGHG 376


>ref|XP_006361680.1| PREDICTED: uncharacterized protein LOC102601559 [Solanum tuberosum]
          Length = 413

 Score =  459 bits (1182), Expect = e-126
 Identities = 235/343 (68%), Positives = 260/343 (75%), Gaps = 5/343 (1%)
 Frame = +3

Query: 429  KPKPNPE-----DSSKQDQLIGXXXXXXXXXXXXXXXWIVRGEDGKLKLQSTPPVRFLHA 593
            KPKP PE     +S                       WIVR E G L LQSTPP R LH 
Sbjct: 56   KPKPKPEPAIPINSDSDSDSNSVPNLEAEIGDQLYIPWIVRDEKGNLTLQSTPPARLLHE 115

Query: 594  MDXXXXXXXXXXXXXXXXXXXXXXAVLTPEPKYSKAARRFYNQNFRDPPQRLSKVLASAG 773
            M                        V TPEPK+SKAARRFYN+NFRDPPQRLSKVLA+AG
Sbjct: 116  M--ANASTSKKKKKGKEVASKAATVVPTPEPKHSKAARRFYNENFRDPPQRLSKVLAAAG 173

Query: 774  VASRRSSEELIFEGRVTVNGSVCNTPQTRVDIGKDLIYVNGNRISKKLPPKVYLALNKPK 953
            VASRRSSEELIF+GRVTVNGSVC TPQT+VD  +D+IYVNGNR+ KKLP KVYLALNKPK
Sbjct: 174  VASRRSSEELIFQGRVTVNGSVCKTPQTKVDPARDVIYVNGNRLPKKLPTKVYLALNKPK 233

Query: 954  GYICSSGEKESKSVFSLFDDYMKSWDKRNPGLPKPRLFTVGRLDVGTTGLIIVTNDGDFA 1133
            GYICSSGEKE+KSV SLFDD++KSWDKR+PG PKPRLFTVGRLDV TTGLIIVTNDG+F 
Sbjct: 234  GYICSSGEKETKSVMSLFDDFIKSWDKRHPGQPKPRLFTVGRLDVATTGLIIVTNDGEFT 293

Query: 1134 QRVSHPSSNLSKEYIAVIDGPVHKRHLVIISEGTLIEGIQCTPDFVELLPQSPDASRPRL 1313
             ++SHPSSNLSKEYIA IDG VHKRHL+ ISEGT+I+G+ C PD VELLP  PD SRPRL
Sbjct: 294  HQISHPSSNLSKEYIATIDGEVHKRHLIAISEGTVIDGVHCIPDNVELLPGQPDLSRPRL 353

Query: 1314 RIVVHEGRNHEVRELVKNAGLKLHSLKRTRIGGYKLPSDLGLG 1442
            RIVVHEGRNHEVRELVKNAGL+L +LKR RIGG++LP+DL LG
Sbjct: 354  RIVVHEGRNHEVRELVKNAGLQLRALKRIRIGGFRLPADLALG 396


>ref|XP_006485600.1| PREDICTED: uncharacterized protein LOC102619728 [Citrus sinensis]
          Length = 401

 Score =  456 bits (1174), Expect = e-126
 Identities = 230/309 (74%), Positives = 252/309 (81%), Gaps = 3/309 (0%)
 Frame = +3

Query: 525  WIVRGEDGKLKLQSTPPVRFLHAM-DXXXXXXXXXXXXXXXXXXXXXXAVLTPE--PKYS 695
            WIVRGEDG LKLQ+ PP R +H + D                      A   P+  PK S
Sbjct: 76   WIVRGEDGNLKLQTHPPARLVHTLADAKTQNLKVNKKKNDTSAAAAAAAAGGPKAAPKLS 135

Query: 696  KAARRFYNQNFRDPPQRLSKVLASAGVASRRSSEELIFEGRVTVNGSVCNTPQTRVDIGK 875
            KAARRFYN NFRD P+RLSKVLA+AGVASRRSSEELIF+G+VTVNGSVCNTPQTRVD  +
Sbjct: 136  KAARRFYNDNFRDTPERLSKVLAAAGVASRRSSEELIFQGQVTVNGSVCNTPQTRVDPAR 195

Query: 876  DLIYVNGNRISKKLPPKVYLALNKPKGYICSSGEKESKSVFSLFDDYMKSWDKRNPGLPK 1055
            D+IYVNG R+ KKLPPKVYLALNKPKGYICS+GEKE KSV SLFDDY+KSWDKRNPGLP+
Sbjct: 196  DIIYVNGKRLPKKLPPKVYLALNKPKGYICSAGEKEVKSVMSLFDDYLKSWDKRNPGLPR 255

Query: 1056 PRLFTVGRLDVGTTGLIIVTNDGDFAQRVSHPSSNLSKEYIAVIDGPVHKRHLVIISEGT 1235
            PRLFTVGRLDV TTGLIIVTNDGDFAQ VSHPSS L KEYIA IDG V+KRHL+ ISEGT
Sbjct: 256  PRLFTVGRLDVATTGLIIVTNDGDFAQAVSHPSSKLQKEYIATIDGAVNKRHLIAISEGT 315

Query: 1236 LIEGIQCTPDFVELLPQSPDASRPRLRIVVHEGRNHEVRELVKNAGLKLHSLKRTRIGGY 1415
            +IEG  CTPD VELLP  PD  RPR+RIVVHEGRNHEVRELVKNAGLKL+SLKR RIGG+
Sbjct: 316  VIEGTHCTPDVVELLPPQPDIPRPRIRIVVHEGRNHEVRELVKNAGLKLYSLKRLRIGGF 375

Query: 1416 KLPSDLGLG 1442
            +LPSDLG+G
Sbjct: 376  RLPSDLGIG 384


>ref|XP_006436494.1| hypothetical protein CICLE_v10031516mg [Citrus clementina]
            gi|557538690|gb|ESR49734.1| hypothetical protein
            CICLE_v10031516mg [Citrus clementina]
          Length = 451

 Score =  456 bits (1174), Expect = e-126
 Identities = 230/309 (74%), Positives = 252/309 (81%), Gaps = 3/309 (0%)
 Frame = +3

Query: 525  WIVRGEDGKLKLQSTPPVRFLHAM-DXXXXXXXXXXXXXXXXXXXXXXAVLTPE--PKYS 695
            WIVRGEDG LKLQ+ PP R +H + D                      A   P+  PK S
Sbjct: 126  WIVRGEDGNLKLQTHPPARLVHTLADAKTQNLKVNKKKNDTSAAAAAAAAGGPKAAPKLS 185

Query: 696  KAARRFYNQNFRDPPQRLSKVLASAGVASRRSSEELIFEGRVTVNGSVCNTPQTRVDIGK 875
            KAARRFYN NFRD P+RLSKVLA+AGVASRRSSEELIF+G+VTVNGSVCNTPQTRVD  +
Sbjct: 186  KAARRFYNDNFRDTPERLSKVLAAAGVASRRSSEELIFQGQVTVNGSVCNTPQTRVDPAR 245

Query: 876  DLIYVNGNRISKKLPPKVYLALNKPKGYICSSGEKESKSVFSLFDDYMKSWDKRNPGLPK 1055
            D+IYVNG R+ KKLPPKVYLALNKPKGYICS+GEKE KSV SLFDDY+KSWDKRNPGLP+
Sbjct: 246  DIIYVNGKRLPKKLPPKVYLALNKPKGYICSAGEKEVKSVMSLFDDYLKSWDKRNPGLPR 305

Query: 1056 PRLFTVGRLDVGTTGLIIVTNDGDFAQRVSHPSSNLSKEYIAVIDGPVHKRHLVIISEGT 1235
            PRLFTVGRLDV TTGLIIVTNDGDFAQ VSHPSS L KEYIA IDG V+KRHL+ ISEGT
Sbjct: 306  PRLFTVGRLDVATTGLIIVTNDGDFAQAVSHPSSKLQKEYIATIDGAVNKRHLIAISEGT 365

Query: 1236 LIEGIQCTPDFVELLPQSPDASRPRLRIVVHEGRNHEVRELVKNAGLKLHSLKRTRIGGY 1415
            +IEG  CTPD VELLP  PD  RPR+RIVVHEGRNHEVRELVKNAGLKL+SLKR RIGG+
Sbjct: 366  VIEGTHCTPDVVELLPPQPDIPRPRIRIVVHEGRNHEVRELVKNAGLKLYSLKRLRIGGF 425

Query: 1416 KLPSDLGLG 1442
            +LPSDLG+G
Sbjct: 426  RLPSDLGIG 434


>gb|EYU32425.1| hypothetical protein MIMGU_mgv1a007390mg [Mimulus guttatus]
          Length = 409

 Score =  455 bits (1170), Expect = e-125
 Identities = 238/385 (61%), Positives = 278/385 (72%)
 Frame = +3

Query: 288  FSSFHISPSVFSKPRLSCRNFRXXXXXXXXXXXXXXXXFGSSTKQTLKPKPNPEDSSKQD 467
            F++ H+S + F  PR   R+FR                    T    KPKP  + S   +
Sbjct: 11   FTTLHLSKTSFILPR---RHFRTVITSSLSTTTTTAAAEFKITFAPPKPKPQLQKSDPTN 67

Query: 468  QLIGXXXXXXXXXXXXXXXWIVRGEDGKLKLQSTPPVRFLHAMDXXXXXXXXXXXXXXXX 647
                               WI+R E+G + LQ  PP RFL AM                 
Sbjct: 68   A------PGIDSGDQLLVPWILRDENGNISLQKMPPQRFLKAM-ANESTQKKKKRDDKTP 120

Query: 648  XXXXXXAVLTPEPKYSKAARRFYNQNFRDPPQRLSKVLASAGVASRRSSEELIFEGRVTV 827
                  A+   EPKYSKAARRFYN+ FR+PPQRL+KVLA+AGVASRRSSEELIF+G+VTV
Sbjct: 121  AKKAKAAMQYVEPKYSKAARRFYNERFREPPQRLAKVLATAGVASRRSSEELIFQGKVTV 180

Query: 828  NGSVCNTPQTRVDIGKDLIYVNGNRISKKLPPKVYLALNKPKGYICSSGEKESKSVFSLF 1007
            NGSVCNTPQTRVD  +D+IYVNG+R++KKLPPKVYLALNKPKGYICS+GE+E+KSVFSLF
Sbjct: 181  NGSVCNTPQTRVDPARDIIYVNGSRLAKKLPPKVYLALNKPKGYICSAGEEETKSVFSLF 240

Query: 1008 DDYMKSWDKRNPGLPKPRLFTVGRLDVGTTGLIIVTNDGDFAQRVSHPSSNLSKEYIAVI 1187
            DD+MK WDKRNPG+PKPRLFTVGRLDV TTGLIIVTNDG+FA +VSHPSSNLSKEYIA I
Sbjct: 241  DDFMKGWDKRNPGIPKPRLFTVGRLDVATTGLIIVTNDGEFANKVSHPSSNLSKEYIATI 300

Query: 1188 DGPVHKRHLVIISEGTLIEGIQCTPDFVELLPQSPDASRPRLRIVVHEGRNHEVRELVKN 1367
            +G V KR+L+ ISEGT +EG++C PD VELLPQ PD SRPRLRIVVHEGRNHEVRELVKN
Sbjct: 301  NGAVTKRNLLTISEGTFVEGVKCVPDSVELLPQQPDISRPRLRIVVHEGRNHEVRELVKN 360

Query: 1368 AGLKLHSLKRTRIGGYKLPSDLGLG 1442
            AGL++H+LKR RIGG++LPSDL LG
Sbjct: 361  AGLQIHALKRIRIGGFRLPSDLALG 385


>ref|XP_007009964.1| Pseudouridine synthase family protein isoform 2, partial [Theobroma
            cacao] gi|508726877|gb|EOY18774.1| Pseudouridine synthase
            family protein isoform 2, partial [Theobroma cacao]
          Length = 398

 Score =  450 bits (1158), Expect = e-124
 Identities = 225/309 (72%), Positives = 249/309 (80%), Gaps = 3/309 (0%)
 Frame = +3

Query: 525  WIVRGEDGKLKLQSTPPVRFLHAMDXXXXXXXXXXXXXXXXXXXXXXAV---LTPEPKYS 695
            WIVRGEDG LKLQ+ PP R +HA+                       AV       PK S
Sbjct: 73   WIVRGEDGNLKLQAHPPARLIHALADAKTQKPKKKVDKAVKKKKEISAVGNASVEPPKLS 132

Query: 696  KAARRFYNQNFRDPPQRLSKVLASAGVASRRSSEELIFEGRVTVNGSVCNTPQTRVDIGK 875
            KAARRFYN+NF +PPQRLSKVLA+AGVASRR SEELIF+G+VTVNGSVCN PQTRVD  K
Sbjct: 133  KAARRFYNENFTEPPQRLSKVLAAAGVASRRGSEELIFDGKVTVNGSVCNAPQTRVDPAK 192

Query: 876  DLIYVNGNRISKKLPPKVYLALNKPKGYICSSGEKESKSVFSLFDDYMKSWDKRNPGLPK 1055
            D+IYVNG+R+ KKLPPK+YLALNKPKGYICSSGEKE KSV  LF+DY+K WDK N G PK
Sbjct: 193  DIIYVNGSRLPKKLPPKIYLALNKPKGYICSSGEKEFKSVLDLFEDYLKRWDKMNRGSPK 252

Query: 1056 PRLFTVGRLDVGTTGLIIVTNDGDFAQRVSHPSSNLSKEYIAVIDGPVHKRHLVIISEGT 1235
            PRLFTVGRLDV TTGLIIVTNDGDFAQ++SHPSSNL+KEYIA IDG V KRHL+ ISEGT
Sbjct: 253  PRLFTVGRLDVATTGLIIVTNDGDFAQKLSHPSSNLNKEYIATIDGEVKKRHLIAISEGT 312

Query: 1236 LIEGIQCTPDFVELLPQSPDASRPRLRIVVHEGRNHEVRELVKNAGLKLHSLKRTRIGGY 1415
             IEGI C PD VELLP+ PD SRPRLRIVVHEGRNHEVRELVKNAGL++HSLKR RIGG+
Sbjct: 313  EIEGIHCIPDSVELLPRQPDLSRPRLRIVVHEGRNHEVRELVKNAGLEIHSLKRVRIGGF 372

Query: 1416 KLPSDLGLG 1442
            +LP+DLGLG
Sbjct: 373  RLPADLGLG 381


>ref|XP_004308770.1| PREDICTED: uncharacterized RNA pseudouridine synthase aq_1464-like
            [Fragaria vesca subsp. vesca]
          Length = 397

 Score =  449 bits (1154), Expect = e-123
 Identities = 238/377 (63%), Positives = 272/377 (72%)
 Frame = +3

Query: 312  SVFSKPRLSCRNFRXXXXXXXXXXXXXXXXFGSSTKQTLKPKPNPEDSSKQDQLIGXXXX 491
            S+F K  LS   FR                F  + K    P   P  SS   Q +     
Sbjct: 14   SLFFKRSLSLTPFRTLPRLTCSSSLEFNITFAPAPKPKPDPNSLPASSSSSGQQL----- 68

Query: 492  XXXXXXXXXXXWIVRGEDGKLKLQSTPPVRFLHAMDXXXXXXXXXXXXXXXXXXXXXXAV 671
                       WIVRGEDGKLKLQS PP R LH M                        V
Sbjct: 69   --------FIPWIVRGEDGKLKLQSHPPARLLHEM---AQADTKTKSKKNKDTAQKKQRV 117

Query: 672  LTPEPKYSKAARRFYNQNFRDPPQRLSKVLASAGVASRRSSEELIFEGRVTVNGSVCNTP 851
            LT EPK+SKAARRFYN+NFR+  QRLSKVLA+AGVASRRSSE+LIF+G+VTVNGSVCNTP
Sbjct: 118  LTAEPKHSKAARRFYNENFRES-QRLSKVLAAAGVASRRSSEQLIFDGKVTVNGSVCNTP 176

Query: 852  QTRVDIGKDLIYVNGNRISKKLPPKVYLALNKPKGYICSSGEKESKSVFSLFDDYMKSWD 1031
            QT VD G+D+IYVNGNR+ KKLPPKVYLALNKPKGYIC++GEK  KSV SLFDDY+KSWD
Sbjct: 177  QTPVDPGRDIIYVNGNRLPKKLPPKVYLALNKPKGYICAAGEK--KSVLSLFDDYLKSWD 234

Query: 1032 KRNPGLPKPRLFTVGRLDVGTTGLIIVTNDGDFAQRVSHPSSNLSKEYIAVIDGPVHKRH 1211
            KRNPG P+PRLFTVGRLDV TTGLI+VTNDGDFAQ +SHPS+NL+KEYIAVI+G V K+ 
Sbjct: 235  KRNPGTPRPRLFTVGRLDVATTGLIVVTNDGDFAQSISHPSANLTKEYIAVIEGSVSKKS 294

Query: 1212 LVIISEGTLIEGIQCTPDFVELLPQSPDASRPRLRIVVHEGRNHEVRELVKNAGLKLHSL 1391
            L+ ISEGT+I+G+ CTPD VELLPQ P+ SR RLRIVVHEGRNHEVRELVK AGL++HSL
Sbjct: 295  LIAISEGTVIDGVHCTPDSVELLPQQPEISRSRLRIVVHEGRNHEVRELVKKAGLEIHSL 354

Query: 1392 KRTRIGGYKLPSDLGLG 1442
            KR RIGG++LP++LGLG
Sbjct: 355  KRVRIGGFRLPTNLGLG 371


>ref|XP_004140075.1| PREDICTED: uncharacterized RNA pseudouridine synthase aq_1464-like
            [Cucumis sativus] gi|449490423|ref|XP_004158601.1|
            PREDICTED: uncharacterized RNA pseudouridine synthase
            aq_1464-like [Cucumis sativus]
          Length = 398

 Score =  448 bits (1152), Expect = e-123
 Identities = 225/306 (73%), Positives = 251/306 (82%)
 Frame = +3

Query: 525  WIVRGEDGKLKLQSTPPVRFLHAMDXXXXXXXXXXXXXXXXXXXXXXAVLTPEPKYSKAA 704
            WIVRGEDG LKLQS PP RFLH++                         +T  PK+SKAA
Sbjct: 84   WIVRGEDGNLKLQSHPPTRFLHSVSEDETKPKKKKVSAGKP--------ITEPPKHSKAA 135

Query: 705  RRFYNQNFRDPPQRLSKVLASAGVASRRSSEELIFEGRVTVNGSVCNTPQTRVDIGKDLI 884
            RRFYN+N R+  QRLSKVLA+AGVASRRSSEELIF GRVTVNGSVCNTPQTRVD  +D+I
Sbjct: 136  RRFYNENIRESSQRLSKVLAAAGVASRRSSEELIFGGRVTVNGSVCNTPQTRVDPARDII 195

Query: 885  YVNGNRISKKLPPKVYLALNKPKGYICSSGEKESKSVFSLFDDYMKSWDKRNPGLPKPRL 1064
            YVNGNR+ KKLPPKVYLALNKPKGYICSSG+KESKSV SLFDDY+KSWDK  PG PKPRL
Sbjct: 196  YVNGNRLPKKLPPKVYLALNKPKGYICSSGKKESKSVISLFDDYLKSWDKTYPGQPKPRL 255

Query: 1065 FTVGRLDVGTTGLIIVTNDGDFAQRVSHPSSNLSKEYIAVIDGPVHKRHLVIISEGTLIE 1244
            FTVGRLDV TTGLIIVTNDGDFAQ +SHPSS LSKEYIA IDG V K++L+ ISEGT+I+
Sbjct: 256  FTVGRLDVATTGLIIVTNDGDFAQGISHPSSGLSKEYIAAIDGTVSKQNLIAISEGTIID 315

Query: 1245 GIQCTPDFVELLPQSPDASRPRLRIVVHEGRNHEVRELVKNAGLKLHSLKRTRIGGYKLP 1424
            G+ CTPD VELLP+ PD S+ RLRIVVHEGRNHEVRELVK AGL+++SLKR RIGG++LP
Sbjct: 316  GVHCTPDSVELLPRQPDISKSRLRIVVHEGRNHEVRELVKAAGLEIYSLKRVRIGGFRLP 375

Query: 1425 SDLGLG 1442
            SDLGLG
Sbjct: 376  SDLGLG 381


>gb|EXB96209.1| putative RNA pseudouridine synthase [Morus notabilis]
          Length = 404

 Score =  444 bits (1143), Expect = e-122
 Identities = 240/387 (62%), Positives = 272/387 (70%), Gaps = 3/387 (0%)
 Frame = +3

Query: 291  SSFHISPSVFSKPRLSCR-NFRXXXXXXXXXXXXXXXXFGSSTKQTLKPKPNPEDSSKQD 467
            S  H+S S+ S   LS R + R                F  S     KPKP PE +++ D
Sbjct: 11   SLHHLSSSLLSLSSLSLRPSIRHILPRVLCSLSSSTSEFNISFAPA-KPKPQPE-ATEVD 68

Query: 468  QLIGXXXXXXXXXXXXXXXWIVRGEDGKLKLQSTPPVRFLHAMDXXXXXXXXXXXXXXXX 647
             L G               WI+RG+DG LKLQS PP R LHAM                 
Sbjct: 69   SLFGADGSQLFIP------WIIRGDDGNLKLQSHPPARLLHAMAHADTKNSKKKKPTAAE 122

Query: 648  XXXXXXAV--LTPEPKYSKAARRFYNQNFRDPPQRLSKVLASAGVASRRSSEELIFEGRV 821
                         EPKYSKAARRFYN+NFR+  QRLSKVLA+AGVASRR+SEELI EGRV
Sbjct: 123  KKKKNDKADKSVAEPKYSKAARRFYNENFRESDQRLSKVLAAAGVASRRNSEELILEGRV 182

Query: 822  TVNGSVCNTPQTRVDIGKDLIYVNGNRISKKLPPKVYLALNKPKGYICSSGEKESKSVFS 1001
            TVNGSVCNTPQTRVD  KD+IYVNGNR+ K+LPPKVYLALNKPKGYICS G+K  KSV S
Sbjct: 183  TVNGSVCNTPQTRVDPAKDVIYVNGNRLPKRLPPKVYLALNKPKGYICSVGDK--KSVMS 240

Query: 1002 LFDDYMKSWDKRNPGLPKPRLFTVGRLDVGTTGLIIVTNDGDFAQRVSHPSSNLSKEYIA 1181
            LFDDY+K WDKRN G  KPRLFTVGRLDV TTGLIIVTNDGDFAQ++SHPSSNLSKEYIA
Sbjct: 241  LFDDYLKIWDKRNLGQSKPRLFTVGRLDVATTGLIIVTNDGDFAQKLSHPSSNLSKEYIA 300

Query: 1182 VIDGPVHKRHLVIISEGTLIEGIQCTPDFVELLPQSPDASRPRLRIVVHEGRNHEVRELV 1361
             I+G V K+HL++ISEGT I+G+ C PD VELLP  P+  RPRLR+VVH+GR HEVREL+
Sbjct: 301  TIEGTVSKKHLLVISEGTFIDGVHCVPDSVELLPNQPEMPRPRLRVVVHDGRKHEVRELM 360

Query: 1362 KNAGLKLHSLKRTRIGGYKLPSDLGLG 1442
            KNAGL++HSLKR RIGGY+LPSDLGLG
Sbjct: 361  KNAGLEIHSLKRVRIGGYRLPSDLGLG 387


>ref|XP_007009963.1| Pseudouridine synthase family protein isoform 1 [Theobroma cacao]
            gi|508726876|gb|EOY18773.1| Pseudouridine synthase family
            protein isoform 1 [Theobroma cacao]
          Length = 453

 Score =  444 bits (1141), Expect = e-122
 Identities = 225/315 (71%), Positives = 249/315 (79%), Gaps = 9/315 (2%)
 Frame = +3

Query: 525  WIVRGEDGKLKLQSTPPVRFLHAMDXXXXXXXXXXXXXXXXXXXXXXAV---LTPEPKYS 695
            WIVRGEDG LKLQ+ PP R +HA+                       AV       PK S
Sbjct: 122  WIVRGEDGNLKLQAHPPARLIHALADAKTQKPKKKVDKAVKKKKEISAVGNASVEPPKLS 181

Query: 696  KAARRFYNQNFRDPPQRLSKVLASAGVASRRSSEELIFEGRVTVNGSVCNTPQ------T 857
            KAARRFYN+NF +PPQRLSKVLA+AGVASRR SEELIF+G+VTVNGSVCN PQ      T
Sbjct: 182  KAARRFYNENFTEPPQRLSKVLAAAGVASRRGSEELIFDGKVTVNGSVCNAPQASDNLQT 241

Query: 858  RVDIGKDLIYVNGNRISKKLPPKVYLALNKPKGYICSSGEKESKSVFSLFDDYMKSWDKR 1037
            RVD  KD+IYVNG+R+ KKLPPK+YLALNKPKGYICSSGEKE KSV  LF+DY+K WDK 
Sbjct: 242  RVDPAKDIIYVNGSRLPKKLPPKIYLALNKPKGYICSSGEKEFKSVLDLFEDYLKRWDKM 301

Query: 1038 NPGLPKPRLFTVGRLDVGTTGLIIVTNDGDFAQRVSHPSSNLSKEYIAVIDGPVHKRHLV 1217
            N G PKPRLFTVGRLDV TTGLIIVTNDGDFAQ++SHPSSNL+KEYIA IDG V KRHL+
Sbjct: 302  NRGSPKPRLFTVGRLDVATTGLIIVTNDGDFAQKLSHPSSNLNKEYIATIDGEVKKRHLI 361

Query: 1218 IISEGTLIEGIQCTPDFVELLPQSPDASRPRLRIVVHEGRNHEVRELVKNAGLKLHSLKR 1397
             ISEGT IEGI C PD VELLP+ PD SRPRLRIVVHEGRNHEVRELVKNAGL++HSLKR
Sbjct: 362  AISEGTEIEGIHCIPDSVELLPRQPDLSRPRLRIVVHEGRNHEVRELVKNAGLEIHSLKR 421

Query: 1398 TRIGGYKLPSDLGLG 1442
             RIGG++LP+DLGLG
Sbjct: 422  VRIGGFRLPADLGLG 436


>ref|XP_006411139.1| hypothetical protein EUTSA_v10016747mg [Eutrema salsugineum]
            gi|557112308|gb|ESQ52592.1| hypothetical protein
            EUTSA_v10016747mg [Eutrema salsugineum]
          Length = 403

 Score =  441 bits (1135), Expect = e-121
 Identities = 219/313 (69%), Positives = 250/313 (79%), Gaps = 7/313 (2%)
 Frame = +3

Query: 525  WIVRGEDGKLKLQSTPPVRFLHAMDXXXXXXXXXXXXXXXXXXXXXXAVLTP-------E 683
            WIVRGEDGKLK+QS PP R +HA+                       A  TP       +
Sbjct: 75   WIVRGEDGKLKVQSQPPARLIHALADATTQNPKKKDKSKKKKPQSTSA-STPSSPASHSK 133

Query: 684  PKYSKAARRFYNQNFRDPPQRLSKVLASAGVASRRSSEELIFEGRVTVNGSVCNTPQTRV 863
            PK SKAARRFYN+NF+DPPQRLSKVLA+AGVASRR+SEELIF+G+VTVNGS+C  PQ RV
Sbjct: 134  PKLSKAARRFYNENFKDPPQRLSKVLAAAGVASRRTSEELIFDGKVTVNGSLCTAPQIRV 193

Query: 864  DIGKDLIYVNGNRISKKLPPKVYLALNKPKGYICSSGEKESKSVFSLFDDYMKSWDKRNP 1043
            D  +D+IYVNGNRI KKLPPKVY ALNKPKGYICSSGEKE KSV SLFDD++ SWDKRNP
Sbjct: 194  DPTRDIIYVNGNRIPKKLPPKVYFALNKPKGYICSSGEKEVKSVISLFDDFLASWDKRNP 253

Query: 1044 GLPKPRLFTVGRLDVGTTGLIIVTNDGDFAQRVSHPSSNLSKEYIAVIDGPVHKRHLVII 1223
            G PKPRLFTVGRLDV TTGLI+VTNDGDFAQ++SHPSS+L KEYI  + G VHKRHL+ I
Sbjct: 254  GTPKPRLFTVGRLDVATTGLIVVTNDGDFAQKLSHPSSSLPKEYITTVVGDVHKRHLMTI 313

Query: 1224 SEGTLIEGIQCTPDFVELLPQSPDASRPRLRIVVHEGRNHEVRELVKNAGLKLHSLKRTR 1403
            SEGT++EG+ C PD VEL+P+  D  R RLRIVVHEGRNHEVRE+VKNAGL++HSLKR R
Sbjct: 314  SEGTIVEGVHCVPDSVELMPKQHDIPRARLRIVVHEGRNHEVREIVKNAGLEVHSLKRVR 373

Query: 1404 IGGYKLPSDLGLG 1442
            IGG++LPSDLGLG
Sbjct: 374  IGGFRLPSDLGLG 386


>emb|CBI31423.3| unnamed protein product [Vitis vinifera]
          Length = 296

 Score =  441 bits (1135), Expect = e-121
 Identities = 211/254 (83%), Positives = 237/254 (93%)
 Frame = +3

Query: 681  EPKYSKAARRFYNQNFRDPPQRLSKVLASAGVASRRSSEELIFEGRVTVNGSVCNTPQTR 860
            EPKYSKAARRFYN+NFRDPPQRLSKVLA+AGVASRR+SEELIFEGRVTVNGSVCNTPQTR
Sbjct: 26   EPKYSKAARRFYNENFRDPPQRLSKVLAAAGVASRRNSEELIFEGRVTVNGSVCNTPQTR 85

Query: 861  VDIGKDLIYVNGNRISKKLPPKVYLALNKPKGYICSSGEKESKSVFSLFDDYMKSWDKRN 1040
            VD  +D+IYVNGNR+ KKLPPKVYLALNKPKGYICSSGEKESKSV  LFDDY+KSW+K+N
Sbjct: 86   VDPARDMIYVNGNRLPKKLPPKVYLALNKPKGYICSSGEKESKSVLCLFDDYLKSWNKQN 145

Query: 1041 PGLPKPRLFTVGRLDVGTTGLIIVTNDGDFAQRVSHPSSNLSKEYIAVIDGPVHKRHLVI 1220
            PG+PKPR+FTVGRLDV TTGLII+TNDGDFAQ++SHPSS LSKEYIA IDG V+KRHL+ 
Sbjct: 146  PGVPKPRIFTVGRLDVATTGLIILTNDGDFAQKLSHPSSKLSKEYIATIDGVVNKRHLIA 205

Query: 1221 ISEGTLIEGIQCTPDFVELLPQSPDASRPRLRIVVHEGRNHEVRELVKNAGLKLHSLKRT 1400
            ISEGT+IEG+ CTPD VELLP  P+ S+PRLR+VVHEGRNHEVRELVK+AGL++HSLKR 
Sbjct: 206  ISEGTVIEGVHCTPDSVELLPPQPNISKPRLRVVVHEGRNHEVRELVKSAGLQIHSLKRI 265

Query: 1401 RIGGYKLPSDLGLG 1442
            RIGG++LPSDLG G
Sbjct: 266  RIGGFRLPSDLGHG 279


>ref|XP_006294188.1| hypothetical protein CARUB_v10023183mg, partial [Capsella rubella]
            gi|482562896|gb|EOA27086.1| hypothetical protein
            CARUB_v10023183mg, partial [Capsella rubella]
          Length = 456

 Score =  438 bits (1126), Expect = e-120
 Identities = 219/320 (68%), Positives = 248/320 (77%), Gaps = 14/320 (4%)
 Frame = +3

Query: 525  WIVRGEDGKLKLQSTPPVRFLH--AMDXXXXXXXXXXXXXXXXXXXXXXAVLTPE----- 683
            WIVRG+DG LKLQS PP R +H  A+D                      +          
Sbjct: 120  WIVRGDDGTLKLQSQPPARLIHSLAIDATTQNPKKKEKSKKKQTQATSSSATASSSASAS 179

Query: 684  -------PKYSKAARRFYNQNFRDPPQRLSKVLASAGVASRRSSEELIFEGRVTVNGSVC 842
                   PK SKAARRFYN+NF++PPQRLSKVLA+AGVASRR+SEELIF+G+VTVNG +C
Sbjct: 180  SPPPQSVPKLSKAARRFYNENFKEPPQRLSKVLAAAGVASRRTSEELIFDGKVTVNGILC 239

Query: 843  NTPQTRVDIGKDLIYVNGNRISKKLPPKVYLALNKPKGYICSSGEKESKSVFSLFDDYMK 1022
            NTPQTRVD  +D+IYVNGNRI KKLPPKVY ALNKPKGYICSSGEKE KSV SLFD+YM 
Sbjct: 240  NTPQTRVDPSRDIIYVNGNRIPKKLPPKVYFALNKPKGYICSSGEKEVKSVISLFDEYMA 299

Query: 1023 SWDKRNPGLPKPRLFTVGRLDVGTTGLIIVTNDGDFAQRVSHPSSNLSKEYIAVIDGPVH 1202
            SWDKRNPG PKPRLFTVGRLDV TTGLIIVTNDGDFAQ++SHPSS+L KEYI  + G +H
Sbjct: 300  SWDKRNPGTPKPRLFTVGRLDVATTGLIIVTNDGDFAQQLSHPSSSLPKEYITTVVGDIH 359

Query: 1203 KRHLVIISEGTLIEGIQCTPDFVELLPQSPDASRPRLRIVVHEGRNHEVRELVKNAGLKL 1382
            KRHL+ ISEGT++EG+ C PD VEL+P+  D  R RLRIVVHEGRNHEVRELVKNAGL +
Sbjct: 360  KRHLMAISEGTIVEGVHCVPDLVELMPKQHDIPRARLRIVVHEGRNHEVRELVKNAGLVV 419

Query: 1383 HSLKRTRIGGYKLPSDLGLG 1442
            HSLKR RIGG++LPSDLGLG
Sbjct: 420  HSLKRVRIGGFRLPSDLGLG 439


>ref|XP_002879786.1| pseudouridine synthase family protein [Arabidopsis lyrata subsp.
            lyrata] gi|297325625|gb|EFH56045.1| pseudouridine
            synthase family protein [Arabidopsis lyrata subsp.
            lyrata]
          Length = 412

 Score =  437 bits (1125), Expect = e-120
 Identities = 217/320 (67%), Positives = 250/320 (78%), Gaps = 14/320 (4%)
 Frame = +3

Query: 525  WIVRGEDGKLKLQSTPPVRFLH--AMDXXXXXXXXXXXXXXXXXXXXXXAVLTP------ 680
            WIVRG+DG LKLQS PP R +H  A+D                      +          
Sbjct: 76   WIVRGDDGTLKLQSQPPARLIHNLAIDATTQNPKKKDKPKKKQPQATSSSASATASASSP 135

Query: 681  ------EPKYSKAARRFYNQNFRDPPQRLSKVLASAGVASRRSSEELIFEGRVTVNGSVC 842
                  +PK SKAARRFYN+NF++PPQRLSKVLA+AGVASRR+SEELIF+G+VTVNG +C
Sbjct: 136  ASHSEVKPKLSKAARRFYNENFKEPPQRLSKVLAAAGVASRRTSEELIFDGKVTVNGILC 195

Query: 843  NTPQTRVDIGKDLIYVNGNRISKKLPPKVYLALNKPKGYICSSGEKESKSVFSLFDDYMK 1022
            NTPQTRVD  +D+IYVNGNRI KKLPPKVY ALNKPKGYICSSGEKE KSV SLFD+Y+ 
Sbjct: 196  NTPQTRVDPSRDIIYVNGNRIPKKLPPKVYFALNKPKGYICSSGEKEIKSVISLFDEYLS 255

Query: 1023 SWDKRNPGLPKPRLFTVGRLDVGTTGLIIVTNDGDFAQRVSHPSSNLSKEYIAVIDGPVH 1202
            SWDKRNPG PKPRLFTVGRLDV TTGLI+VTNDGDFAQ++SHPSS+L KEYI  + G +H
Sbjct: 256  SWDKRNPGTPKPRLFTVGRLDVATTGLIVVTNDGDFAQKLSHPSSSLPKEYITTVVGDIH 315

Query: 1203 KRHLVIISEGTLIEGIQCTPDFVELLPQSPDASRPRLRIVVHEGRNHEVRELVKNAGLKL 1382
            KRHL+ ISEGT++EG+ C PD VEL+P+  D  R RLRIVVHEGRNHEVRELVKNAGL++
Sbjct: 316  KRHLMAISEGTIVEGVHCVPDSVELMPKQHDIPRARLRIVVHEGRNHEVRELVKNAGLEV 375

Query: 1383 HSLKRTRIGGYKLPSDLGLG 1442
            HSLKR RIGG++LPSDLGLG
Sbjct: 376  HSLKRVRIGGFRLPSDLGLG 395


>ref|XP_004496237.1| PREDICTED: uncharacterized RNA pseudouridine synthase aq_1464-like
            [Cicer arietinum]
          Length = 410

 Score =  434 bits (1115), Expect = e-119
 Identities = 223/342 (65%), Positives = 251/342 (73%), Gaps = 4/342 (1%)
 Frame = +3

Query: 429  KPKPNPEDSSKQDQLIGXXXXXXXXXXXXXXXWIVRGEDGKLKLQSTPPVRFLHAM---- 596
            KPKPNP+    + Q                  WIVRGEDG  KL S PP  FL AM    
Sbjct: 49   KPKPNPKP---EPQTESPNQFPDDNEGQLIIPWIVRGEDGNFKLLSEPPPSFLKAMANDK 105

Query: 597  DXXXXXXXXXXXXXXXXXXXXXXAVLTPEPKYSKAARRFYNQNFRDPPQRLSKVLASAGV 776
                                      T  P+YSKAARRFYN+NF+D   RLSKVLA++GV
Sbjct: 106  TGTKKSDKNQTTKNKKKSENETKVRATAPPQYSKAARRFYNENFKDSGTRLSKVLAASGV 165

Query: 777  ASRRSSEELIFEGRVTVNGSVCNTPQTRVDIGKDLIYVNGNRISKKLPPKVYLALNKPKG 956
            ASRRS E+LIFEG+VTVNGSVCNTPQTRVD  KD+IYVNG+R+ K+ P KVYLALNKPKG
Sbjct: 166  ASRRSCEDLIFEGKVTVNGSVCNTPQTRVDPAKDVIYVNGSRLPKRQPHKVYLALNKPKG 225

Query: 957  YICSSGEKESKSVFSLFDDYMKSWDKRNPGLPKPRLFTVGRLDVGTTGLIIVTNDGDFAQ 1136
            YICSSGEKESKSV SLFDD++ SWDK++PG+P PRLFTVGRLDV TTGL+IVTNDGDFAQ
Sbjct: 226  YICSSGEKESKSVLSLFDDFLSSWDKKHPGVPMPRLFTVGRLDVATTGLLIVTNDGDFAQ 285

Query: 1137 RVSHPSSNLSKEYIAVIDGPVHKRHLVIISEGTLIEGIQCTPDFVELLPQSPDASRPRLR 1316
            R+SHPSSN SKEYIA ++G VHKRHL  ISEGT IEG+ C PD VELLP  PDA R RLR
Sbjct: 286  RLSHPSSNFSKEYIATVNGLVHKRHLTAISEGTTIEGVHCVPDSVELLPSMPDAQRARLR 345

Query: 1317 IVVHEGRNHEVRELVKNAGLKLHSLKRTRIGGYKLPSDLGLG 1442
            IVVH+GR HEVRELVKNAGL++HSLKR RIGG++LP DLGLG
Sbjct: 346  IVVHDGRKHEVRELVKNAGLEIHSLKRVRIGGFRLPPDLGLG 387


>ref|NP_181447.2| protein SUPPRESSOR OF VARIEGATION 1 [Arabidopsis thaliana]
            gi|21617894|gb|AAM66944.1| unknown [Arabidopsis thaliana]
            gi|26450440|dbj|BAC42334.1| unknown protein [Arabidopsis
            thaliana] gi|330254545|gb|AEC09639.1| pseudouridine
            synthase family protein [Arabidopsis thaliana]
          Length = 410

 Score =  432 bits (1112), Expect = e-118
 Identities = 215/319 (67%), Positives = 248/319 (77%), Gaps = 13/319 (4%)
 Frame = +3

Query: 525  WIVRGEDGKLKLQSTPPVRFLH--AMDXXXXXXXXXXXXXXXXXXXXXXAVLTP------ 680
            WIVR +DG LKLQS PP R +H  A+D                      +  T       
Sbjct: 75   WIVRSDDGTLKLQSQPPARLIHNLAIDATTQNPKKKDKSKKKQPQATSSSSATTTASSPA 134

Query: 681  -----EPKYSKAARRFYNQNFRDPPQRLSKVLASAGVASRRSSEELIFEGRVTVNGSVCN 845
                 +PK SKAARRFYN+NF++ PQRLSKVLA+AGVASRR+SEELIF+G+VTVNG +CN
Sbjct: 135  SHSEVKPKLSKAARRFYNENFKEQPQRLSKVLAAAGVASRRTSEELIFDGKVTVNGILCN 194

Query: 846  TPQTRVDIGKDLIYVNGNRISKKLPPKVYLALNKPKGYICSSGEKESKSVFSLFDDYMKS 1025
            TPQTRVD  +D+IYVNGNRI KKLPPKVY ALNKPKGYICSSGEKE KS  SLFD+Y+ S
Sbjct: 195  TPQTRVDPSRDIIYVNGNRIPKKLPPKVYFALNKPKGYICSSGEKEIKSAISLFDEYLSS 254

Query: 1026 WDKRNPGLPKPRLFTVGRLDVGTTGLIIVTNDGDFAQRVSHPSSNLSKEYIAVIDGPVHK 1205
            WDKRNPG PKPRLFTVGRLDV TTGLI+VTNDGDFAQ++SHPSS+L KEYI  + G +HK
Sbjct: 255  WDKRNPGTPKPRLFTVGRLDVATTGLIVVTNDGDFAQKLSHPSSSLPKEYITTVVGDIHK 314

Query: 1206 RHLVIISEGTLIEGIQCTPDFVELLPQSPDASRPRLRIVVHEGRNHEVRELVKNAGLKLH 1385
            RHL+ ISEGT++EG+ C PD VEL+P+  D  R RLRIVVHEGRNHEVRELVKNAGL++H
Sbjct: 315  RHLMAISEGTMVEGVHCVPDSVELMPKQHDIPRARLRIVVHEGRNHEVRELVKNAGLEVH 374

Query: 1386 SLKRTRIGGYKLPSDLGLG 1442
            SLKR RIGG++LPSDLGLG
Sbjct: 375  SLKRVRIGGFRLPSDLGLG 393


>ref|XP_006848911.1| hypothetical protein AMTR_s00161p00064200 [Amborella trichopoda]
            gi|548852364|gb|ERN10492.1| hypothetical protein
            AMTR_s00161p00064200 [Amborella trichopoda]
          Length = 403

 Score =  429 bits (1103), Expect = e-117
 Identities = 223/345 (64%), Positives = 257/345 (74%)
 Frame = +3

Query: 402  FGSSTKQTLKPKPNPEDSSKQDQLIGXXXXXXXXXXXXXXXWIVRGEDGKLKLQSTPPVR 581
            FG+  K+   P+   +DSS    +                 WIV+ E+G LK+QSTPP  
Sbjct: 61   FGARKKENPSPEMGEQDSSSS--IKAPQKELPSQPAPLFIPWIVKDENGNLKIQSTPPAH 118

Query: 582  FLHAMDXXXXXXXXXXXXXXXXXXXXXXAVLTPEPKYSKAARRFYNQNFRDPPQRLSKVL 761
             L AM                         L+ EPK+SKAARRFYNQNFR+P QRLSKVL
Sbjct: 119  ILSAM----AEASTAKKTKKKKEGGSKSGSLSAEPKHSKAARRFYNQNFREP-QRLSKVL 173

Query: 762  ASAGVASRRSSEELIFEGRVTVNGSVCNTPQTRVDIGKDLIYVNGNRISKKLPPKVYLAL 941
            ASAGVASRRSSEELIF+G+VTVNGSVCN PQTRVD  KD+IYVNG+R++KKLPPK+Y AL
Sbjct: 174  ASAGVASRRSSEELIFDGKVTVNGSVCNVPQTRVDPIKDVIYVNGSRLAKKLPPKLYFAL 233

Query: 942  NKPKGYICSSGEKESKSVFSLFDDYMKSWDKRNPGLPKPRLFTVGRLDVGTTGLIIVTND 1121
            NKPKGYICSS EKESKSV  LFDDY KSW+K NPG+PKPRLFTVGRLDV TTGLIIVTND
Sbjct: 234  NKPKGYICSSSEKESKSVLMLFDDYWKSWNKINPGIPKPRLFTVGRLDVATTGLIIVTND 293

Query: 1122 GDFAQRVSHPSSNLSKEYIAVIDGPVHKRHLVIISEGTLIEGIQCTPDFVELLPQSPDAS 1301
            GDFAQR++HPSS L KEYIA I+G VH+RHL +IS+GT++EG  CTPD VE LP  P +S
Sbjct: 294  GDFAQRIAHPSSGLKKEYIAAIEGNVHRRHLQLISDGTIVEGKHCTPDLVEHLPAQPGSS 353

Query: 1302 RPRLRIVVHEGRNHEVRELVKNAGLKLHSLKRTRIGGYKLPSDLG 1436
            R RLRIVV+EGRN EVRE+VKNAGL+LHSLKR RIGG+KLP+ LG
Sbjct: 354  RSRLRIVVNEGRNREVREIVKNAGLELHSLKRVRIGGFKLPAGLG 398