BLASTX nr result

ID: Akebia26_contig00009531 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia26_contig00009531
         (342 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270491.1| PREDICTED: sister chromatid cohesion 1 prote...    72   6e-11
emb|CBI40063.3| unnamed protein product [Vitis vinifera]               56   6e-06

>ref|XP_002270491.1| PREDICTED: sister chromatid cohesion 1 protein 2-like [Vitis
           vinifera]
          Length = 756

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 40/101 (39%), Positives = 60/101 (59%), Gaps = 1/101 (0%)
 Frame = +2

Query: 2   GNVKPHQQITLEETWKDGESEHYHPDKYLHEDF-SRFETNSAVYTPIEDAFSPHMMDIDM 178
           GNV+P ++ITL++T K+    HY  D+Y  ED  S+ ET S +  P ED   P +MD   
Sbjct: 298 GNVRPQEEITLQDTLKNEGIRHYFLDQYRFEDVASQPETCSTISPPDEDFLLPCLMDTAQ 357

Query: 179 VVSPSDNQTSLQASMEKLQGDHLPQDECPDIEMFCGTEISL 301
           +VS   + +S++ASMEK +     Q EC D+++F   EI +
Sbjct: 358 LVSSLHDLSSIEASMEKFRDCSFSQGECLDLQLFHRVEIDI 398


>emb|CBI40063.3| unnamed protein product [Vitis vinifera]
          Length = 621

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 40/133 (30%), Positives = 60/133 (45%), Gaps = 33/133 (24%)
 Frame = +2

Query: 2   GNVKPHQQITLE--------------------------------ETWKDGESEHYHPDKY 85
           GNV+P ++ITL+                                +T K+    HY  D+Y
Sbjct: 131 GNVRPQEEITLQGSTQLYVNSFYLTLNNFFFFLFILLHFIFGAADTLKNEGIRHYFLDQY 190

Query: 86  LHEDF-SRFETNSAVYTPIEDAFSPHMMDIDMVVSPSDNQTSLQASMEKLQGDHLPQDEC 262
             ED  S+ ET S +  P ED   P +MD   +VS   + +S++ASMEK +     Q EC
Sbjct: 191 RFEDVASQPETCSTISPPDEDFLLPCLMDTAQLVSSLHDLSSIEASMEKFRDCSFSQGEC 250

Query: 263 PDIEMFCGTEISL 301
            D+++F   EI +
Sbjct: 251 LDLQLFHRVEIDI 263


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