BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia26_contig00003101
         (1239 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271484.1| PREDICTED: pentatricopeptide repeat-containi...   466   e-129
emb|CAN72195.1| hypothetical protein VITISV_014979 [Vitis vinifera]   465   e-128
ref|XP_007043745.1| Tetratricopeptide repeat-like superfamily pr...   451   e-124
ref|XP_004292553.1| PREDICTED: pentatricopeptide repeat-containi...   442   e-121
ref|XP_004164277.1| PREDICTED: pentatricopeptide repeat-containi...   417   e-114
ref|XP_004152003.1| PREDICTED: pentatricopeptide repeat-containi...   412   e-112
ref|XP_003528083.1| PREDICTED: pentatricopeptide repeat-containi...   375   e-101
ref|XP_003602717.1| Pentatricopeptide repeat-containing protein ...   372   e-100
ref|XP_007212561.1| hypothetical protein PRUPE_ppa015401mg [Prun...   370   e-100
ref|XP_007137833.1| hypothetical protein PHAVU_009G159500g [Phas...   366   1e-98
ref|XP_004503027.1| PREDICTED: pentatricopeptide repeat-containi...   360   7e-97
ref|XP_007041101.1| Tetratricopeptide repeat (TPR)-like superfam...   291   4e-76
ref|XP_007147940.1| hypothetical protein PHAVU_006G167300g [Phas...   288   3e-75
ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containi...   288   3e-75
ref|XP_003541672.2| PREDICTED: pentatricopeptide repeat-containi...   285   4e-74
ref|XP_006483346.1| PREDICTED: pentatricopeptide repeat-containi...   283   8e-74
ref|XP_004298429.1| PREDICTED: pentatricopeptide repeat-containi...   283   1e-73
ref|XP_006468073.1| PREDICTED: pentatricopeptide repeat-containi...   282   2e-73
ref|XP_004485987.1| PREDICTED: pentatricopeptide repeat-containi...   280   7e-73
ref|XP_007046082.1| Pentatricopeptide repeat (PPR) superfamily p...   280   1e-72

>ref|XP_002271484.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065-like
            [Vitis vinifera]
          Length = 558

 Score =  466 bits (1199), Expect = e-129
 Identities = 220/330 (66%), Positives = 269/330 (81%)
 Frame = +3

Query: 249  MNRVYKLHARLIKTGRQNDPVSFRELLRTCTESVPECLSYARSIFDRIPSPDTFAWNSII 428
            MN +YKLHARL+KTG  N P++ R LL +C  S P  LSYARSIFD I  PDTFA+N+II
Sbjct: 1    MNHIYKLHARLLKTGHHNHPLALRRLLLSCAASAPASLSYARSIFDLIAFPDTFAFNTII 60

Query: 429  RAYSYTCPSESLSLFSNMRRGAISPDHFTFPFVLKACSRLQRGQELHSVILKLGFDSNIY 608
            RA++ + PS SLSLFS M    +SPDHFTFPFVLKAC+RLQ G +LHS++ KLGFDS++Y
Sbjct: 61   RAHADSSPSFSLSLFSKMAMAGVSPDHFTFPFVLKACARLQTGLDLHSLLFKLGFDSDVY 120

Query: 609  VQNGLIYLYGSCRLVDLALKMFEEMPDRDLVSWSSMITCFTNNGFGDEALAVFKEMQLRT 788
            VQNGLI+ YG C  +D ALK+FEEMP+RDLVSWSSMI CF  NGFG EALA+F+ MQL  
Sbjct: 121  VQNGLIHFYGCCGFLDFALKVFEEMPERDLVSWSSMIACFAKNGFGYEALALFQRMQLVG 180

Query: 789  SIRPDEITMVSVISAVSSLGALELGRWVHLYIYRNGFNPTVSMGTALIDMYSRCGSIDEA 968
            +++PDE+ ++SV+SA+S LG LELG+W+  +I RNG   TVS+GTAL+DM+SRCG I+E+
Sbjct: 181  TVKPDEVIVLSVVSAISILGDLELGKWIRGFISRNGLEFTVSLGTALVDMFSRCGCIEES 240

Query: 969  VRVFDEMPKRNVFTWTALIDGLAVHGRSREALRMFYEMKESGLRPDDITFVGVLVACSHG 1148
            +RVFDEM +RNV TWTALI+GLAVHGRS EALRMFYEM+  G +PD +TF GVLVACSHG
Sbjct: 241  MRVFDEMGERNVLTWTALINGLAVHGRSAEALRMFYEMRNHGFQPDHVTFTGVLVACSHG 300

Query: 1149 GLLKEGWQVFKIMRDEYGMEPKLEHYGCMV 1238
            GL+ EGW VF+ +R+EYGMEP  EHYGCMV
Sbjct: 301  GLVSEGWHVFESIRNEYGMEPLPEHYGCMV 330


>emb|CAN72195.1| hypothetical protein VITISV_014979 [Vitis vinifera]
          Length = 558

 Score =  465 bits (1197), Expect = e-128
 Identities = 220/330 (66%), Positives = 268/330 (81%)
 Frame = +3

Query: 249  MNRVYKLHARLIKTGRQNDPVSFRELLRTCTESVPECLSYARSIFDRIPSPDTFAWNSII 428
            MN +YKLHARL+KTG  N P++ R LL +C  S P  LSYARSIFD I  PDTFA+N+II
Sbjct: 1    MNHIYKLHARLLKTGHHNHPLALRRLLLSCAASAPASLSYARSIFDLIAFPDTFAFNTII 60

Query: 429  RAYSYTCPSESLSLFSNMRRGAISPDHFTFPFVLKACSRLQRGQELHSVILKLGFDSNIY 608
            RA++ + PS SLSLFS M    +SPDHFTFPFVLKAC+RLQ G +LHS++ KLGFDS++Y
Sbjct: 61   RAHADSSPSFSLSLFSKMTMAGVSPDHFTFPFVLKACARLQTGLDLHSLLFKLGFDSDVY 120

Query: 609  VQNGLIYLYGSCRLVDLALKMFEEMPDRDLVSWSSMITCFTNNGFGDEALAVFKEMQLRT 788
            VQNGLI+ YG C  +D ALK FEEMP+RDLVSWSSMI CF  NGFG EALA+F+ MQL  
Sbjct: 121  VQNGLIHFYGCCGFLDFALKAFEEMPERDLVSWSSMIACFAKNGFGYEALALFQRMQLVG 180

Query: 789  SIRPDEITMVSVISAVSSLGALELGRWVHLYIYRNGFNPTVSMGTALIDMYSRCGSIDEA 968
            +++PDE+ ++SV+SA+S LG LELG+W+  +I RNG   TVS+GTAL+DM+SRCG I+E+
Sbjct: 181  TVKPDEVIVLSVVSAISILGDLELGKWIRGFISRNGLEFTVSLGTALVDMFSRCGCIEES 240

Query: 969  VRVFDEMPKRNVFTWTALIDGLAVHGRSREALRMFYEMKESGLRPDDITFVGVLVACSHG 1148
            +RVFDEM +RNV TWTALI+GLAVHGRS EALRMFYEM+  G +PD +TF GVLVACSHG
Sbjct: 241  MRVFDEMGERNVLTWTALINGLAVHGRSAEALRMFYEMRNHGFQPDHVTFTGVLVACSHG 300

Query: 1149 GLLKEGWQVFKIMRDEYGMEPKLEHYGCMV 1238
            GL+ EGW VF+ +R+EYGMEP  EHYGCMV
Sbjct: 301  GLVSEGWHVFESIRNEYGMEPLPEHYGCMV 330


>ref|XP_007043745.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
            gi|508707680|gb|EOX99576.1| Tetratricopeptide repeat-like
            superfamily protein [Theobroma cacao]
          Length = 558

 Score =  451 bits (1161), Expect = e-124
 Identities = 214/330 (64%), Positives = 268/330 (81%)
 Frame = +3

Query: 249  MNRVYKLHARLIKTGRQNDPVSFRELLRTCTESVPECLSYARSIFDRIPSPDTFAWNSII 428
            MN VYKLHARLIKTG QNDP+S R LL +C  S PE LSYAR +F RIPSPDTFA+N++I
Sbjct: 1    MNNVYKLHARLIKTGLQNDPLSLRPLLLSCAASAPESLSYARCLFARIPSPDTFAYNTLI 60

Query: 429  RAYSYTCPSESLSLFSNMRRGAISPDHFTFPFVLKACSRLQRGQELHSVILKLGFDSNIY 608
            RA++++ PS ++SLFS M RG +SPDHFTFPFV KAC+RLQ G E H++++KLG  S+IY
Sbjct: 61   RAHAHSFPSHAVSLFSAMHRGGLSPDHFTFPFVFKACARLQIGLETHALVIKLGLASDIY 120

Query: 609  VQNGLIYLYGSCRLVDLALKMFEEMPDRDLVSWSSMITCFTNNGFGDEALAVFKEMQLRT 788
            +QN LI  YGS   V  AL +++EM  RDLVSWSSMI+CF NN FG +AL +F+EMQL  
Sbjct: 121  IQNALISFYGSLGSVVEALDVYDEMRVRDLVSWSSMISCFANNNFGYDALGLFQEMQLLE 180

Query: 789  SIRPDEITMVSVISAVSSLGALELGRWVHLYIYRNGFNPTVSMGTALIDMYSRCGSIDEA 968
            S +PDE+TM+SVISAVSSLGALELG+WV  +++R G   TVS+GTALIDMYSRCGS+D A
Sbjct: 181  SFKPDEVTMLSVISAVSSLGALELGKWVDAFVFRTGLKLTVSLGTALIDMYSRCGSVDNA 240

Query: 969  VRVFDEMPKRNVFTWTALIDGLAVHGRSREALRMFYEMKESGLRPDDITFVGVLVACSHG 1148
            ++VF+EM  +NV TWT LI+GLAVHGR +EALR+FY MK++GL+PD +TF GVLVAC+HG
Sbjct: 241  IQVFNEMTVKNVLTWTVLINGLAVHGRGKEALRVFYGMKKTGLKPDHVTFNGVLVACTHG 300

Query: 1149 GLLKEGWQVFKIMRDEYGMEPKLEHYGCMV 1238
            GL+ +GW+VF  +   YGMEP ++HYGCMV
Sbjct: 301  GLVDDGWRVFNSIEKVYGMEPTVQHYGCMV 330



 Score = 97.4 bits (241), Expect = 1e-17
 Identities = 76/271 (28%), Positives = 129/271 (47%), Gaps = 13/271 (4%)
 Frame = +3

Query: 270  HARLIKTGR------QNDPVSFRELLRTCTESVPECLSYARSIFDRIPSPDTFAWNSIIR 431
            HA +IK G       QN  +SF   L +  E++         ++D +   D  +W+S+I 
Sbjct: 107  HALVIKLGLASDIYIQNALISFYGSLGSVVEAL--------DVYDEMRVRDLVSWSSMIS 158

Query: 432  AYSYT-CPSESLSLFSNMRR-GAISPDHFTFPFVLKACSRL---QRGQELHSVILKLGFD 596
             ++      ++L LF  M+   +  PD  T   V+ A S L   + G+ + + + + G  
Sbjct: 159  CFANNNFGYDALGLFQEMQLLESFKPDEVTMLSVISAVSSLGALELGKWVDAFVFRTGLK 218

Query: 597  SNIYVQNGLIYLYGSCRLVDLALKMFEEMPDRDLVSWSSMITCFTNNGFGDEALAVFKEM 776
              + +   LI +Y  C  VD A+++F EM  +++++W+ +I     +G G EAL VF  M
Sbjct: 219  LTVSLGTALIDMYSRCGSVDNAIQVFNEMTVKNVLTWTVLINGLAVHGRGKEALRVFYGM 278

Query: 777  QLRTSIRPDEITMVSVISAVSSLGALELGRWVHLYIYR-NGFNPTVSMGTALIDMYSRCG 953
            + +T ++PD +T   V+ A +  G ++ G  V   I +  G  PTV     ++D+  R G
Sbjct: 279  K-KTGLKPDHVTFNGVLVACTHGGLVDDGWRVFNSIEKVYGMEPTVQHYGCMVDLLGRAG 337

Query: 954  SIDEAVRVFDEMPKR-NVFTWTALIDGLAVH 1043
             + EA    D MP R N   W  L+     H
Sbjct: 338  FLHEAFEFVDRMPARPNAVIWRTLLGACVKH 368


>ref|XP_004292553.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065-like
            [Fragaria vesca subsp. vesca]
          Length = 563

 Score =  442 bits (1137), Expect = e-121
 Identities = 214/334 (64%), Positives = 275/334 (82%), Gaps = 3/334 (0%)
 Frame = +3

Query: 246  SMNRVYKLHARLIKTGRQNDPVSFRELLRTCTESV-PECLSYARSIFDRIPSPDTFAWNS 422
            SMNRVYK HA LIKTG+QN P + R LL  C  +  P+CLSY R++F  IPSPDTFA+N+
Sbjct: 2    SMNRVYKFHAWLIKTGQQNHPPALRRLLLWCAATPSPKCLSYFRALFAYIPSPDTFAYNT 61

Query: 423  IIRAY--SYTCPSESLSLFSNMRRGAISPDHFTFPFVLKACSRLQRGQELHSVILKLGFD 596
            IIRA+  +++ PS ++S F+ MR+  + PD+FTFPF+LKAC+RLQ GQ++H+ ILKLGF 
Sbjct: 62   IIRAHVAAHSSPSHAISFFTQMRQQGVPPDNFTFPFLLKACARLQLGQDVHTHILKLGFL 121

Query: 597  SNIYVQNGLIYLYGSCRLVDLALKMFEEMPDRDLVSWSSMITCFTNNGFGDEALAVFKEM 776
            S++YVQN LI  YGSC  V+LAL +F  M ++DLVSWSSMI+ FTNNGF +EALA+F++M
Sbjct: 122  SDVYVQNALISFYGSCGSVELALNVFHAMHEKDLVSWSSMISSFTNNGFFNEALALFRQM 181

Query: 777  QLRTSIRPDEITMVSVISAVSSLGALELGRWVHLYIYRNGFNPTVSMGTALIDMYSRCGS 956
            Q   ++ PDE+TM+SVISAVSSLGALELG+ VH YI ++G   TVS+GTALIDMYSRCG 
Sbjct: 182  QHAKNVMPDEVTMLSVISAVSSLGALELGQRVHYYIKKSGLELTVSLGTALIDMYSRCGM 241

Query: 957  IDEAVRVFDEMPKRNVFTWTALIDGLAVHGRSREALRMFYEMKESGLRPDDITFVGVLVA 1136
            +D+++ VFDEMP +NV TWTAL  GLAVHGRSREALR+FYEMK++GL+PD ++  G+LVA
Sbjct: 242  VDKSIEVFDEMPLKNVQTWTALSTGLAVHGRSREALRVFYEMKKAGLQPDHMSITGILVA 301

Query: 1137 CSHGGLLKEGWQVFKIMRDEYGMEPKLEHYGCMV 1238
            CSHGGL+++GW+VFK M+DEYG+EP L+HYGCMV
Sbjct: 302  CSHGGLVQDGWRVFKSMKDEYGLEPMLKHYGCMV 335


>ref|XP_004164277.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910-like
            [Cucumis sativus]
          Length = 558

 Score =  417 bits (1071), Expect = e-114
 Identities = 199/330 (60%), Positives = 258/330 (78%)
 Frame = +3

Query: 249  MNRVYKLHARLIKTGRQNDPVSFRELLRTCTESVPECLSYARSIFDRIPSPDTFAWNSII 428
            MN VY+LH  +IK+ +QNDP+S R LL +C  + PE LSYAR +F RIPSPDT A+N+II
Sbjct: 1    MNNVYRLHCYIIKSSKQNDPLSLRTLLLSCVAAAPESLSYARYVFSRIPSPDTIAYNTII 60

Query: 429  RAYSYTCPSESLSLFSNMRRGAISPDHFTFPFVLKACSRLQRGQELHSVILKLGFDSNIY 608
            R++S   PS SLS F +MR   I  D+FTFPFVLKACSRLQ    LHS+I+K G  S+I+
Sbjct: 61   RSHSRFFPSHSLSYFFSMRSNGIPLDNFTFPFVLKACSRLQINLHLHSLIVKYGLGSDIF 120

Query: 609  VQNGLIYLYGSCRLVDLALKMFEEMPDRDLVSWSSMITCFTNNGFGDEALAVFKEMQLRT 788
            VQN LI +YG C  +++A+K+F+EM +RD VSWS++I  F NNG+  EAL +F++MQL  
Sbjct: 121  VQNALICVYGYCGSLEMAVKVFDEMSERDSVSWSTVIASFLNNGYASEALDLFEKMQLED 180

Query: 789  SIRPDEITMVSVISAVSSLGALELGRWVHLYIYRNGFNPTVSMGTALIDMYSRCGSIDEA 968
             + PDE+TM+SVISA+S LG LELGRWV  +I R GF  +V++GTALIDM+SRCGSIDE+
Sbjct: 181  KVVPDEVTMLSVISAISHLGDLELGRWVRAFIGRLGFGVSVALGTALIDMFSRCGSIDES 240

Query: 969  VRVFDEMPKRNVFTWTALIDGLAVHGRSREALRMFYEMKESGLRPDDITFVGVLVACSHG 1148
            + VF++M  RNV TWTALI+GL +HGRS EAL MF+ M++SG++PD +TF GVLVACSHG
Sbjct: 241  IVVFEKMAVRNVLTWTALINGLGIHGRSMEALAMFHSMRKSGVQPDYVTFSGVLVACSHG 300

Query: 1149 GLLKEGWQVFKIMRDEYGMEPKLEHYGCMV 1238
            GL+KEGW +F+ +R  YGM+P L+HYGCMV
Sbjct: 301  GLVKEGWDIFESIRKVYGMDPLLDHYGCMV 330


>ref|XP_004152003.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065-like
            [Cucumis sativus]
          Length = 558

 Score =  412 bits (1059), Expect = e-112
 Identities = 198/330 (60%), Positives = 256/330 (77%)
 Frame = +3

Query: 249  MNRVYKLHARLIKTGRQNDPVSFRELLRTCTESVPECLSYARSIFDRIPSPDTFAWNSII 428
            MN VY+LH  +IK+ +QNDP+S R LL +C  + PE LSYAR +F RIPSPDT A+N+II
Sbjct: 1    MNNVYRLHCYIIKSSKQNDPLSLRTLLLSCVAAAPESLSYARYVFSRIPSPDTIAYNTII 60

Query: 429  RAYSYTCPSESLSLFSNMRRGAISPDHFTFPFVLKACSRLQRGQELHSVILKLGFDSNIY 608
            R++S   PS SL  F +MR   I  D+FTFPFVLKACSRLQ    LHS+I+K G DS+I+
Sbjct: 61   RSHSRFFPSHSLFYFFSMRSNGIPLDNFTFPFVLKACSRLQINLHLHSLIVKYGLDSDIF 120

Query: 609  VQNGLIYLYGSCRLVDLALKMFEEMPDRDLVSWSSMITCFTNNGFGDEALAVFKEMQLRT 788
            VQN LI +YG C  +++A+K+F+EM +RD VSWS++I  F NNG+  EAL +F++MQL  
Sbjct: 121  VQNALICVYGYCGSLEMAVKVFDEMSERDSVSWSTVIASFLNNGYASEALDLFEKMQLED 180

Query: 789  SIRPDEITMVSVISAVSSLGALELGRWVHLYIYRNGFNPTVSMGTALIDMYSRCGSIDEA 968
             + PDE+TM+SVISA+S LG LELGRWV  +I R G   +V++GTALIDM+SRCGSIDE+
Sbjct: 181  KVVPDEVTMLSVISAISHLGDLELGRWVRAFIGRLGLGVSVALGTALIDMFSRCGSIDES 240

Query: 969  VRVFDEMPKRNVFTWTALIDGLAVHGRSREALRMFYEMKESGLRPDDITFVGVLVACSHG 1148
            + VF++M  RNV TWTALI+GL VHGRS EAL MF+ M++SG++PD +TF GVLVACSHG
Sbjct: 241  IVVFEKMAVRNVLTWTALINGLGVHGRSTEALAMFHSMRKSGVQPDYVTFSGVLVACSHG 300

Query: 1149 GLLKEGWQVFKIMRDEYGMEPKLEHYGCMV 1238
            GL+KEGW +F+ +R  Y M+P L+HYGCMV
Sbjct: 301  GLVKEGWDIFESIRKVYRMDPLLDHYGCMV 330


>ref|XP_003528083.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065-like
            [Glycine max]
          Length = 568

 Score =  375 bits (964), Expect = e-101
 Identities = 195/335 (58%), Positives = 247/335 (73%), Gaps = 4/335 (1%)
 Frame = +3

Query: 246  SMNRVYKLHARLIKTGRQNDPVSFRELLRTC--TESVPECLSYARSIFDRIPSP-DTFAW 416
            +M  VY LHA LIK  + ++P+S R  +  C  + S P+   YA ++  R P P D F +
Sbjct: 8    NMKSVYNLHATLIKNAQHDNPLSLRTFILRCANSSSPPDTARYAAAVLLRFPIPGDPFPY 67

Query: 417  NSIIRAYSYTCPSESLSLFSNMRRGAISPDHFTFPFVLKACSRLQRGQELHSVILKLGFD 596
            N++IR  +   PS +L+LFS+M R  +  DHFTFP +LK+ S+L     +H+++LKLGF 
Sbjct: 68   NAVIRHVALHAPSLALALFSHMHRTNVPFDHFTFPLILKS-SKLNP-HCIHTLVLKLGFH 125

Query: 597  SNIYVQNGLIYLYGSCRLVDLALKMFEEMPDRDLVSWSSMITCFTNNGFGDEALAVFKEM 776
            SNIYVQN LI  YG+   +  +LK+F+EMP RDL+SWSS+I+CF   G  DEAL +F++M
Sbjct: 126  SNIYVQNALINSYGTSGSLHASLKLFDEMPRRDLISWSSLISCFAKRGLPDEALTLFQQM 185

Query: 777  QLRTS-IRPDEITMVSVISAVSSLGALELGRWVHLYIYRNGFNPTVSMGTALIDMYSRCG 953
            QL+ S I PD + M+SVISAVSSLGALELG WVH +I R G N TVS+G+ALIDMYSRCG
Sbjct: 186  QLKESDILPDGVVMLSVISAVSSLGALELGIWVHAFISRIGVNLTVSLGSALIDMYSRCG 245

Query: 954  SIDEAVRVFDEMPKRNVFTWTALIDGLAVHGRSREALRMFYEMKESGLRPDDITFVGVLV 1133
             ID +V+VFDEMP RNV TWTALI+GLAVHGR REAL  FY+M ESGL+PD I F+GVLV
Sbjct: 246  DIDRSVKVFDEMPHRNVVTWTALINGLAVHGRGREALEAFYDMVESGLKPDRIAFMGVLV 305

Query: 1134 ACSHGGLLKEGWQVFKIMRDEYGMEPKLEHYGCMV 1238
            ACSHGGL++EG +VF  M  EYG+EP LEHYGCMV
Sbjct: 306  ACSHGGLVEEGRRVFSSMWSEYGIEPALEHYGCMV 340


>ref|XP_003602717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355491765|gb|AES72968.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 554

 Score =  372 bits (955), Expect = e-100
 Identities = 193/334 (57%), Positives = 249/334 (74%), Gaps = 4/334 (1%)
 Frame = +3

Query: 249  MNRVYKLHARLIKTGRQNDPVSFRELLRTCTESVPECLSYARSIFDRIPSP-DTFAWNSI 425
            M RVYKLHA LIKTG+  +P S R    TC+ + P    YA ++  R+P+P D F++N+I
Sbjct: 1    MIRVYKLHATLIKTGQHQNPHSLRPFFLTCS-NYPAAARYAATVLLRLPTPPDPFSYNTI 59

Query: 426  IRAYSYTCPSESLSLFSNMRRGAISPDHFTFPFVLKACSRLQRGQELHSVILKLGFDSNI 605
            I+  S   P+ ++SLFS+M R ++  DHFTFP +LK          LHS+I KLGFD+NI
Sbjct: 60   IKHVS---PTGAISLFSHMHRNSVPFDHFTFPLILKH----HHHHLLHSLIFKLGFDTNI 112

Query: 606  YVQNGLIYLYGSCRLVDLALKMFEEMPDRDLVSWSSMITCFTNNGFGDEALAVFKEMQL- 782
            +VQN LI  YGS   +D+A+K+F+EM  RD+VSWS++I+C   N    EAL+VF++MQ+ 
Sbjct: 113  FVQNALINAYGSRGSLDVAVKLFDEMRRRDIVSWSTLISCLVKNNLPAEALSVFQQMQMG 172

Query: 783  RTSIRP--DEITMVSVISAVSSLGALELGRWVHLYIYRNGFNPTVSMGTALIDMYSRCGS 956
               IR   D   M+SVISAVSSLG +ELG WVH +I R G   TV +GTALI+MYSRCG 
Sbjct: 173  HRDIRNWLDRAIMLSVISAVSSLGVIELGIWVHSFIVRMGIVMTVPLGTALINMYSRCGL 232

Query: 957  IDEAVRVFDEMPKRNVFTWTALIDGLAVHGRSREALRMFYEMKESGLRPDDITFVGVLVA 1136
            ID +V+VFDEMP+RNV TWTALI+GLAVHGRSREAL++FYEMKESGL+PD   F+GVLVA
Sbjct: 233  IDRSVKVFDEMPERNVVTWTALINGLAVHGRSREALKVFYEMKESGLKPDGALFIGVLVA 292

Query: 1137 CSHGGLLKEGWQVFKIMRDEYGMEPKLEHYGCMV 1238
            CSHGGL+++GW+VF+ MRDE+G++P LEHYGCMV
Sbjct: 293  CSHGGLVEDGWRVFESMRDEFGIKPMLEHYGCMV 326


>ref|XP_007212561.1| hypothetical protein PRUPE_ppa015401mg [Prunus persica]
            gi|462408426|gb|EMJ13760.1| hypothetical protein
            PRUPE_ppa015401mg [Prunus persica]
          Length = 484

 Score =  370 bits (950), Expect = e-100
 Identities = 174/248 (70%), Positives = 209/248 (84%)
 Frame = +3

Query: 495  ISPDHFTFPFVLKACSRLQRGQELHSVILKLGFDSNIYVQNGLIYLYGSCRLVDLALKMF 674
            + PD+FTFPF+LKAC+RLQ GQ+LH++ILKLGFDS+IYVQN L+  YG C  V+ AL +F
Sbjct: 9    VPPDNFTFPFLLKACARLQLGQDLHALILKLGFDSDIYVQNALLSFYGGCGSVEPALNVF 68

Query: 675  EEMPDRDLVSWSSMITCFTNNGFGDEALAVFKEMQLRTSIRPDEITMVSVISAVSSLGAL 854
             EM +RDLVSWSSMI C  NNGF  EALA+F++MQL  ++ PDE+TM+SVIS VS LG +
Sbjct: 69   HEMRERDLVSWSSMIACLANNGFAYEALALFQQMQLAENVMPDEVTMLSVISPVSILGEI 128

Query: 855  ELGRWVHLYIYRNGFNPTVSMGTALIDMYSRCGSIDEAVRVFDEMPKRNVFTWTALIDGL 1034
            ELG WVH +I+RNG   TVS+GTALIDM+SRCGSID+++RVFDEMP RNV TWTALI GL
Sbjct: 129  ELGEWVHQFIHRNGLELTVSLGTALIDMFSRCGSIDKSIRVFDEMPLRNVRTWTALISGL 188

Query: 1035 AVHGRSREALRMFYEMKESGLRPDDITFVGVLVACSHGGLLKEGWQVFKIMRDEYGMEPK 1214
            AVHGRSREALR+FYEMKESGL+PD I   GVLVACSHGGL+ +GW+VFK + DEYG++P 
Sbjct: 189  AVHGRSREALRVFYEMKESGLQPDHIAITGVLVACSHGGLVDDGWRVFKSIEDEYGLKPT 248

Query: 1215 LEHYGCMV 1238
            LEHYGCMV
Sbjct: 249  LEHYGCMV 256


>ref|XP_007137833.1| hypothetical protein PHAVU_009G159500g [Phaseolus vulgaris]
            gi|561010920|gb|ESW09827.1| hypothetical protein
            PHAVU_009G159500g [Phaseolus vulgaris]
          Length = 567

 Score =  366 bits (940), Expect = 1e-98
 Identities = 193/335 (57%), Positives = 244/335 (72%), Gaps = 4/335 (1%)
 Frame = +3

Query: 246  SMNRVYKLHARLIKTGRQNDPVSFRELLRTC--TESVPECLSYARSIFDRIPSP-DTFAW 416
            +M +VY LHA LIK G+  +P+S R  +  C  + S P+   YA S+  R P P DTF +
Sbjct: 7    NMKKVYNLHATLIKRGQHENPLSLRPFILHCANSSSPPDTARYAASVLLRFPIPGDTFTY 66

Query: 417  NSIIRAYSYTCPSESLSLFSNMRRGAISPDHFTFPFVLKACSRLQRGQELHSVILKLGFD 596
            N+IIR  +   PS +L LFS+M R  I  DHFTFP +LK  S+L     +HSV+LKLGF 
Sbjct: 67   NAIIRHLALHAPSLALLLFSHMHRTNIPFDHFTFPLILKP-SKLNP-HSIHSVVLKLGFY 124

Query: 597  SNIYVQNGLIYLYGSCRLVDLALKMFEEMPDRDLVSWSSMITCFTNNGFGDEALAVFKEM 776
            S+IYVQN LI  YG+   + ++LK+F+E+   DLVSWSS+I+ F  +GF  EAL +F++M
Sbjct: 125  SSIYVQNALINSYGTSGSLHVSLKLFDEISHPDLVSWSSLISSFAKHGFPHEALTLFQQM 184

Query: 777  QLR-TSIRPDEITMVSVISAVSSLGALELGRWVHLYIYRNGFNPTVSMGTALIDMYSRCG 953
            QLR T I PD + M+SV+SAVSSLGALELG WVH +I R G N TV +GTALI+MYSRCG
Sbjct: 185  QLRHTDILPDGVIMLSVLSAVSSLGALELGIWVHAFISRTGLNFTVPLGTALINMYSRCG 244

Query: 954  SIDEAVRVFDEMPKRNVFTWTALIDGLAVHGRSREALRMFYEMKESGLRPDDITFVGVLV 1133
             ID +V+VFDE+P RNV TWTALI+GLAVHGR REAL  FY+M ESGL+PD + F+G LV
Sbjct: 245  DIDRSVKVFDEIPHRNVVTWTALINGLAVHGRGREALEAFYDMVESGLKPDCVAFMGALV 304

Query: 1134 ACSHGGLLKEGWQVFKIMRDEYGMEPKLEHYGCMV 1238
            ACSHGG ++EG QVF+ M  +YG+EP LEHYGCMV
Sbjct: 305  ACSHGGFVEEGQQVFQGMWSKYGVEPALEHYGCMV 339


>ref|XP_004503027.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065-like
            [Cicer arietinum]
          Length = 561

 Score =  360 bits (924), Expect = 7e-97
 Identities = 186/336 (55%), Positives = 237/336 (70%), Gaps = 6/336 (1%)
 Frame = +3

Query: 249  MNRVYKLHARLIKTGRQNDPVSFRELLRTCTESVP--ECLSYARSIFDRIP-SPDTFAWN 419
            M RVYKLHA LIKTG+ ++P S R    +C +S    +   YA S+  R P  PD F +N
Sbjct: 1    MKRVYKLHATLIKTGQHDNPHSLRSFFLSCVQSSCSLDTARYAASVLLRFPIPPDPFLYN 60

Query: 420  SIIRAYSYTCPSESLSLFSNMRRGAISPDHFTFPFVLKACSRLQRGQELHSVILKLGFDS 599
            ++IR  +   P+ +LS+FS+M R A+  DHFTFP +LK          LHS++ KLGFDS
Sbjct: 61   TVIRHVAPHSPTLALSIFSHMHRNAVPFDHFTFPLILK---HHNHHHHLHSLVFKLGFDS 117

Query: 600  NIYVQNGLIYLYGSCRLVDLALKMFEEMPDRDLVSWSSMITCFTNNGFGDEALAVFKEMQ 779
            NI+VQN L+  YGS   ++ A+K+F+EM  RDLVSWS++I CF NN    EAL++F++MQ
Sbjct: 118  NIFVQNALLNAYGSRGSINFAVKLFDEMLYRDLVSWSTLIACFVNNNLHFEALSLFQQMQ 177

Query: 780  LRT---SIRPDEITMVSVISAVSSLGALELGRWVHLYIYRNGFNPTVSMGTALIDMYSRC 950
            LR        D + M+SVISAVS LG LEL  WVH +I R G   TV +G++LI+MYSRC
Sbjct: 178  LRDPDIGNSSDGVIMLSVISAVSCLGVLELAIWVHSFIVRIGLPLTVPLGSSLINMYSRC 237

Query: 951  GSIDEAVRVFDEMPKRNVFTWTALIDGLAVHGRSREALRMFYEMKESGLRPDDITFVGVL 1130
            GSID +V VFDEMP RNV TWTALI+GLAVHG SRE L  FY+M ESGL+PD   F+  L
Sbjct: 238  GSIDRSVMVFDEMPHRNVVTWTALINGLAVHGCSREGLEAFYDMTESGLKPDRAAFIAAL 297

Query: 1131 VACSHGGLLKEGWQVFKIMRDEYGMEPKLEHYGCMV 1238
            VACSHGGL+++GW+VF+ MRDE+G+EP LEHYGCMV
Sbjct: 298  VACSHGGLVEDGWRVFRSMRDEFGIEPMLEHYGCMV 333


>ref|XP_007041101.1| Tetratricopeptide repeat (TPR)-like superfamily protein isoform 1
            [Theobroma cacao] gi|590681507|ref|XP_007041102.1|
            Tetratricopeptide repeat (TPR)-like superfamily protein
            isoform 1 [Theobroma cacao]
            gi|590681511|ref|XP_007041103.1| Tetratricopeptide repeat
            (TPR)-like superfamily protein isoform 1 [Theobroma
            cacao] gi|508705036|gb|EOX96932.1| Tetratricopeptide
            repeat (TPR)-like superfamily protein isoform 1
            [Theobroma cacao] gi|508705037|gb|EOX96933.1|
            Tetratricopeptide repeat (TPR)-like superfamily protein
            isoform 1 [Theobroma cacao] gi|508705038|gb|EOX96934.1|
            Tetratricopeptide repeat (TPR)-like superfamily protein
            isoform 1 [Theobroma cacao]
          Length = 616

 Score =  291 bits (745), Expect = 4e-76
 Identities = 152/342 (44%), Positives = 232/342 (67%), Gaps = 5/342 (1%)
 Frame = +3

Query: 228  LQQQ*GSMNRVYKLHARLIKTGRQ-NDPVSFRELLRTCTESVPECLSYARSIFDRIPSPD 404
            LQ    S  ++ ++HA  ++ G   NDP   + L+ +   S+   +SY  SIF RI S +
Sbjct: 49   LQNYGSSELKLRQIHAFSLRHGVPLNDPDIGKHLIYSLV-SLSTPMSYPYSIFSRIQSSN 107

Query: 405  TFAWNSIIRAYSYT-CPSESLSLFSNMRRGAISPDHFTFPFVLKACSRL---QRGQELHS 572
             F WN++IR Y+ +  P  +L L+  M+   I PD  T+PF+LKA ++L   + G+ +HS
Sbjct: 108  VFIWNTMIRGYAESENPEPALELYRQMQASCIEPDTHTYPFLLKAVAKLADIRVGENMHS 167

Query: 573  VILKLGFDSNIYVQNGLIYLYGSCRLVDLALKMFEEMPDRDLVSWSSMITCFTNNGFGDE 752
             +++ GF+S ++VQN ++++Y +C LVD A KMFE MP RD+V+W+S+I  F  NG  +E
Sbjct: 168  TVIRNGFESLVFVQNSMLHMYAACGLVDSAYKMFELMPARDVVAWNSVINGFALNGKPNE 227

Query: 753  ALAVFKEMQLRTSIRPDEITMVSVISAVSSLGALELGRWVHLYIYRNGFNPTVSMGTALI 932
            AL +F+EM L   + PD  T+VS+ SA + LGAL LG  +H+YI + G +  + +  AL+
Sbjct: 228  ALTLFREMGLE-GVEPDGFTLVSLFSACAELGALALGNRIHVYIVKVGLSENLHVKNALL 286

Query: 933  DMYSRCGSIDEAVRVFDEMPKRNVFTWTALIDGLAVHGRSREALRMFYEMKESGLRPDDI 1112
            D+Y++CGSI EA +VF+EM +RNV +W++LI GLAV+G  +EAL++F E++  GL P ++
Sbjct: 287  DLYAKCGSIREAKKVFNEMKERNVVSWSSLIVGLAVNGFVKEALQLFKEIERKGLVPSEV 346

Query: 1113 TFVGVLVACSHGGLLKEGWQVFKIMRDEYGMEPKLEHYGCMV 1238
            TFVGVL ACSH G++ EG+  F  M++EYG+ PK+EH+GCMV
Sbjct: 347  TFVGVLYACSHCGMVDEGFYYFTRMKEEYGILPKIEHHGCMV 388


>ref|XP_007147940.1| hypothetical protein PHAVU_006G167300g [Phaseolus vulgaris]
            gi|561021163|gb|ESW19934.1| hypothetical protein
            PHAVU_006G167300g [Phaseolus vulgaris]
          Length = 611

 Score =  288 bits (737), Expect = 3e-75
 Identities = 151/342 (44%), Positives = 227/342 (66%), Gaps = 5/342 (1%)
 Frame = +3

Query: 228  LQQQ*GSMNRVYKLHARLIKTGRQ-NDPVSFRELLRTCTESVPECLSYARSIFDRIPSPD 404
            LQ    S  ++ ++HA  I+ G   ++P   + L+ T   S+   +SYA ++F RI +P+
Sbjct: 44   LQSSASSKYKLRQIHAFSIRHGVSLHNPDMAKHLIFTIV-SLSAPMSYAYNVFTRIHNPN 102

Query: 405  TFAWNSIIRAYSYTC-PSESLSLFSNMRRGAISPDHFTFPFVLKACSR---LQRGQELHS 572
             F WN++IR Y+ +  PS +L  +  M    + PD  T+PF+LKA S+   ++ G+ +HS
Sbjct: 103  VFTWNTMIRGYAESQNPSPALHFYRQMTVSCVEPDTHTYPFLLKAISKSLNVREGEAIHS 162

Query: 573  VILKLGFDSNIYVQNGLIYLYGSCRLVDLALKMFEEMPDRDLVSWSSMITCFTNNGFGDE 752
            V ++ GF S ++VQN L+++Y +C   + A K+FE M +RDLV+W+S+I  F  NG  +E
Sbjct: 163  VTIRNGFQSLVFVQNSLLHIYAACGYTESAYKVFELMKERDLVAWNSVINGFALNGRPNE 222

Query: 753  ALAVFKEMQLRTSIRPDEITMVSVISAVSSLGALELGRWVHLYIYRNGFNPTVSMGTALI 932
            AL +F+EM +   + PD  T+VS++SA + LGALELGR VH+Y+ + G      +  +L+
Sbjct: 223  ALTLFREMSVE-GVEPDGFTVVSLLSACAELGALELGRRVHVYLLKVGLRENSYVTNSLL 281

Query: 933  DMYSRCGSIDEAVRVFDEMPKRNVFTWTALIDGLAVHGRSREALRMFYEMKESGLRPDDI 1112
            D+Y++CG+I EA +VF EM +RN  +WT+LI GLAV+G   EAL +F EM+  GL P +I
Sbjct: 282  DLYAKCGTIREAQQVFGEMSERNAVSWTSLIVGLAVNGFGEEALELFKEMEGQGLVPSEI 341

Query: 1113 TFVGVLVACSHGGLLKEGWQVFKIMRDEYGMEPKLEHYGCMV 1238
            TFVGVL ACSH G+L EG+  FK M +EYG+ P++EHYGCMV
Sbjct: 342  TFVGVLYACSHCGMLDEGFNYFKRMEEEYGILPRIEHYGCMV 383


>ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065-like
            [Vitis vinifera]
          Length = 613

 Score =  288 bits (737), Expect = 3e-75
 Identities = 140/297 (47%), Positives = 212/297 (71%), Gaps = 4/297 (1%)
 Frame = +3

Query: 360  LSYARSIFDRIPSPDTFAWNSIIRAYSYT-CPSESLSLFSNMRRGAISPDHFTFPFVLKA 536
            +SYA  IF +I +P+ F WN++IR Y+ +  P  +L L+  M    I PD  T+PF+LKA
Sbjct: 90   MSYAHQIFSQIQNPNIFTWNTMIRGYAESENPMPALELYRQMHVSCIEPDTHTYPFLLKA 149

Query: 537  CSRL---QRGQELHSVILKLGFDSNIYVQNGLIYLYGSCRLVDLALKMFEEMPDRDLVSW 707
             ++L   + G+++HS+ ++ GF+S ++VQN L+++Y +C   + A K+FE M +R+LV+W
Sbjct: 150  IAKLMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLVTW 209

Query: 708  SSMITCFTNNGFGDEALAVFKEMQLRTSIRPDEITMVSVISAVSSLGALELGRWVHLYIY 887
            +S+I  +  NG  +EAL +F+EM LR  + PD  TMVS++SA + LGAL LGR  H+Y+ 
Sbjct: 210  NSVINGYALNGRPNEALTLFREMGLR-GVEPDGFTMVSLLSACAELGALALGRRAHVYMV 268

Query: 888  RNGFNPTVSMGTALIDMYSRCGSIDEAVRVFDEMPKRNVFTWTALIDGLAVHGRSREALR 1067
            + G +  +  G AL+D+Y++CGSI +A +VFDEM +++V +WT+LI GLAV+G  +EAL 
Sbjct: 269  KVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALE 328

Query: 1068 MFYEMKESGLRPDDITFVGVLVACSHGGLLKEGWQVFKIMRDEYGMEPKLEHYGCMV 1238
            +F E++  GL P +ITFVGVL ACSH G++ EG+  FK M++EYG+ PK+EHYGCMV
Sbjct: 329  LFKELERKGLMPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMV 385


>ref|XP_003541672.2| PREDICTED: pentatricopeptide repeat-containing protein At4g21065-like
            [Glycine max]
          Length = 607

 Score =  285 bits (728), Expect = 4e-74
 Identities = 149/336 (44%), Positives = 227/336 (67%), Gaps = 5/336 (1%)
 Frame = +3

Query: 246  SMNRVYKLHARLIKTGRQ-NDPVSFRELLRTCTESVPECLSYARSIFDRIPSPDTFAWNS 422
            S +++ ++HA  I+ G   N+P   + L+ T   S+   +SYA ++F  I +P+ F WN+
Sbjct: 46   SKHKLKQIHAFSIRHGVSLNNPDMGKHLIFTIV-SLSAPMSYAYNVFTVIHNPNVFTWNT 104

Query: 423  IIRAYSYTC-PSESLSLFSNMRRGAISPDHFTFPFVLKACSR---LQRGQELHSVILKLG 590
            IIR Y+ +  PS +   +  M    + PD  T+PF+LKA S+   ++ G+ +HSV ++ G
Sbjct: 105  IIRGYAESDNPSPAFLFYRQMVVSCVEPDTHTYPFLLKAISKSLNVREGEAIHSVTIRNG 164

Query: 591  FDSNIYVQNGLIYLYGSCRLVDLALKMFEEMPDRDLVSWSSMITCFTNNGFGDEALAVFK 770
            F+S ++VQN L+++Y +C   + A K+FE M +RDLV+W+SMI  F  NG  +EAL +F+
Sbjct: 165  FESLVFVQNSLLHIYAACGDTESAYKVFELMKERDLVAWNSMINGFALNGRPNEALTLFR 224

Query: 771  EMQLRTSIRPDEITMVSVISAVSSLGALELGRWVHLYIYRNGFNPTVSMGTALIDMYSRC 950
            EM +   + PD  T+VS++SA + LGALELGR VH+Y+ + G +    +  +L+D+Y++C
Sbjct: 225  EMSVE-GVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLSKNSHVTNSLLDLYAKC 283

Query: 951  GSIDEAVRVFDEMPKRNVFTWTALIDGLAVHGRSREALRMFYEMKESGLRPDDITFVGVL 1130
            G+I EA RVF EM +RN  +WT+LI GLAV+G   EAL +F EM+  GL P +ITFVGVL
Sbjct: 284  GAIREAQRVFSEMSERNAVSWTSLIVGLAVNGFGEEALELFKEMEGQGLVPSEITFVGVL 343

Query: 1131 VACSHGGLLKEGWQVFKIMRDEYGMEPKLEHYGCMV 1238
             ACSH G+L EG++ F+ M++E G+ P++EHYGCMV
Sbjct: 344  YACSHCGMLDEGFEYFRRMKEECGIIPRIEHYGCMV 379


>ref|XP_006483346.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
            mitochondrial-like isoform X1 [Citrus sinensis]
          Length = 600

 Score =  283 bits (725), Expect = 8e-74
 Identities = 150/370 (40%), Positives = 237/370 (64%), Gaps = 12/370 (3%)
 Frame = +3

Query: 165  RAALRLSNWFSFAGKEEQNGCLQ--QQ*GSMNRVYKLHARLIKTGRQNDPVSFRELLRTC 338
            +A  RL        +  +  CL   Q   S+ ++ ++H+R++K G  N+P+   +   T 
Sbjct: 6    KAKSRLQCKIPIHDRAAEQSCLALLQSCNSLPKLAQIHSRILKLGLLNNPLVLTKF--TA 63

Query: 339  TESVPECLSYARSIFDRIPSP----DTFAWNSIIRAYSY--TCPSESLSLFSNMRRGAIS 500
            T S    + YA S+     S     DTF +N+IIRAY+      + S+  ++ M    +S
Sbjct: 64   TSSDLNAIDYATSVIFSPESDTLLYDTFLFNTIIRAYAQINNLKTNSIECYNLMLEYGVS 123

Query: 501  PDHFTFPFVLKACSR---LQRGQELHSVILKLGFDSNIYVQNGLIYLYGSCRL-VDLALK 668
            P+ FT+PFVLKAC+    L  G+ +H  +LK  F  +I+VQN L+++YGSC   ++L  K
Sbjct: 124  PNKFTYPFVLKACAGIGDLNLGKSVHGAVLKFQFGDDIHVQNTLVHMYGSCEGGIELGRK 183

Query: 669  MFEEMPDRDLVSWSSMITCFTNNGFGDEALAVFKEMQLRTSIRPDEITMVSVISAVSSLG 848
            +F+EM +RD VSWS+MI  +   G   +A+ +F++MQ+ + + PDEITMV+V+SA + LG
Sbjct: 184  VFDEMSERDSVSWSAMIGGYARLGLSTDAIDLFRQMQI-SGVCPDEITMVTVLSACTDLG 242

Query: 849  ALELGRWVHLYIYRNGFNPTVSMGTALIDMYSRCGSIDEAVRVFDEMPKRNVFTWTALID 1028
            ALE+G+WV  +I +   N +V +  ALIDM+++CG +D+A+++F  M  R + +WT++I 
Sbjct: 243  ALEVGKWVESFIEKQMVNRSVGLCNALIDMFAKCGDVDKALKLFRSMNGRTIVSWTSVIA 302

Query: 1029 GLAVHGRSREALRMFYEMKESGLRPDDITFVGVLVACSHGGLLKEGWQVFKIMRDEYGME 1208
            GLA+HGR  EA+ +F EM E+G+ PDD+ FVG+L ACSH GL+ +G + F  M++++G+ 
Sbjct: 303  GLAMHGRGLEAVALFEEMLEAGVPPDDVAFVGLLSACSHCGLVDKGREYFDSMKNDFGII 362

Query: 1209 PKLEHYGCMV 1238
            PK+EHYGCMV
Sbjct: 363  PKIEHYGCMV 372



 Score =  117 bits (292), Expect = 1e-23
 Identities = 81/280 (28%), Positives = 137/280 (48%), Gaps = 7/280 (2%)
 Frame = +3

Query: 243  GSMNRVYKLHARLIKTGRQNDPVSFRELLRTCTESVPECLSYARSIFDRIPSPDTFAWNS 422
            G +N    +H  ++K  +  D +  +  L     S    +   R +FD +   D+ +W++
Sbjct: 140  GDLNLGKSVHGAVLKF-QFGDDIHVQNTLVHMYGSCEGGIELGRKVFDEMSERDSVSWSA 198

Query: 423  IIRAYSYT-CPSESLSLFSNMRRGAISPDHFTFPFVLKACS---RLQRGQELHSVILKLG 590
            +I  Y+     ++++ LF  M+   + PD  T   VL AC+    L+ G+ + S I K  
Sbjct: 199  MIGGYARLGLSTDAIDLFRQMQISGVCPDEITMVTVLSACTDLGALEVGKWVESFIEKQM 258

Query: 591  FDSNIYVQNGLIYLYGSCRLVDLALKMFEEMPDRDLVSWSSMITCFTNNGFGDEALAVFK 770
             + ++ + N LI ++  C  VD ALK+F  M  R +VSW+S+I     +G G EA+A+F+
Sbjct: 259  VNRSVGLCNALIDMFAKCGDVDKALKLFRSMNGRTIVSWTSVIAGLAMHGRGLEAVALFE 318

Query: 771  EMQLRTSIRPDEITMVSVISAVSSLGALELGRWVHLYIYRNGFN--PTVSMGTALIDMYS 944
            EM L   + PD++  V ++SA S  G ++ GR  +    +N F   P +     ++DM  
Sbjct: 319  EM-LEAGVPPDDVAFVGLLSACSHCGLVDKGR-EYFDSMKNDFGIIPKIEHYGCMVDMLC 376

Query: 945  RCGSIDEAVRVFDEMP-KRNVFTWTALIDGLAVHGRSREA 1061
            R G + EA     +MP + N   W  LI      G  + A
Sbjct: 377  RSGRVKEAHEFIQKMPIEANPIIWRTLISACCARGELKLA 416


>ref|XP_004298429.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980-like
            [Fragaria vesca subsp. vesca]
          Length = 593

 Score =  283 bits (724), Expect = 1e-73
 Identities = 141/336 (41%), Positives = 223/336 (66%), Gaps = 5/336 (1%)
 Frame = +3

Query: 246  SMNRVYKLHARLIKTGRQNDPVSFRELLRTCT-ESVPECLSYARSIFDRIPSPDTFAWNS 422
            S+ ++ ++ A  IKT  Q D     +L+ +CT       + YA  +FD+IP PD   +N+
Sbjct: 30   SLTQLQQIQAFSIKTHLQYDLSVLSKLINSCTLNPTATSMDYAHQLFDQIPHPDIVVFNT 89

Query: 423  IIRAYSY-TCPSESLSLFSNMRRGAISPDHFTFPFVLKACSR---LQRGQELHSVILKLG 590
            + R YS  T P  ++SLFS +    I PD +TFP +LKAC+    L+ G++LH  ++K G
Sbjct: 90   MARGYSRSTTPFRAISLFSQVLSSGIFPDDYTFPALLKACAACKALEEGKQLHCYVIKCG 149

Query: 591  FDSNIYVQNGLIYLYGSCRLVDLALKMFEEMPDRDLVSWSSMITCFTNNGFGDEALAVFK 770
               NI+V   LI +Y  C  VD+A ++F++MP+  +V  ++MIT +  N   +EALA+F+
Sbjct: 150  MQLNIFVCPALINMYTECSAVDVARQVFDKMPEPCVVVHNAMITGYARNSRPNEALALFR 209

Query: 771  EMQLRTSIRPDEITMVSVISAVSSLGALELGRWVHLYIYRNGFNPTVSMGTALIDMYSRC 950
            E+Q  + ++P ++TM+S +S+ + LGAL+LG+W+H Y+ +N F+  V + TALIDMYS+C
Sbjct: 210  ELQA-SGLKPTDVTMLSALSSCALLGALDLGKWIHEYVKKNRFDRYVKVNTALIDMYSKC 268

Query: 951  GSIDEAVRVFDEMPKRNVFTWTALIDGLAVHGRSREALRMFYEMKESGLRPDDITFVGVL 1130
            GS+++AV VF+ M  ++   W+A+I   A HG   +A+ MF EMK + +RPD+ITF+G+L
Sbjct: 269  GSLEDAVSVFENMSVKDTQAWSAMIVAYATHGNVSKAMLMFEEMKRARIRPDEITFLGLL 328

Query: 1131 VACSHGGLLKEGWQVFKIMRDEYGMEPKLEHYGCMV 1238
             ACSH GL++EG + F  M ++YG+ P+++HYGCMV
Sbjct: 329  YACSHAGLVEEGCKYFYSMSEKYGIIPRIKHYGCMV 364


>ref|XP_006468073.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065-like
            [Citrus sinensis]
          Length = 616

 Score =  282 bits (722), Expect = 2e-73
 Identities = 146/335 (43%), Positives = 218/335 (65%), Gaps = 4/335 (1%)
 Frame = +3

Query: 246  SMNRVYKLHARLIKTGRQNDPVSFRELLRTCTESVPECLSYARSIFDRIPSPDTFAWNSI 425
            S +++ ++HA  I+ G   +     + L     S+   +SYA +IF  +  P+ F WN++
Sbjct: 55   SKHKLKQVHAFSIRHGVPLNNPDLGKYLIYAIVSLSFPMSYAHNIFSHVQDPNIFTWNTM 114

Query: 426  IRAYSYTC-PSESLSLFSNMRRGAISPDHFTFPFVLKACSRL---QRGQELHSVILKLGF 593
            IR Y+ +  P  ++ L+S M    I PD  T+PF+LKA S+L   + G++ HSV ++ GF
Sbjct: 115  IRGYAESANPLLAVELYSKMHVSGIKPDTHTYPFLLKAISKLADVRMGEQTHSVAIRNGF 174

Query: 594  DSNIYVQNGLIYLYGSCRLVDLALKMFEEMPDRDLVSWSSMITCFTNNGFGDEALAVFKE 773
            +S ++VQN L+++Y +   V  A K+FE M +RDLV+W+S+I  F +NG  +EAL +F+E
Sbjct: 175  ESLVFVQNSLVHMYAAFGHVKDACKVFELMSERDLVAWNSVINGFASNGKPNEALTIFRE 234

Query: 774  MQLRTSIRPDEITMVSVISAVSSLGALELGRWVHLYIYRNGFNPTVSMGTALIDMYSRCG 953
            M     + PD  TMVS+ SA + LGAL LGR  H Y+++ G +  V++  AL+D YS+CG
Sbjct: 235  MASE-GVEPDGYTMVSLFSACAELGALALGRRAHTYVWKVGLSDNVNVNNALLDFYSKCG 293

Query: 954  SIDEAVRVFDEMPKRNVFTWTALIDGLAVHGRSREALRMFYEMKESGLRPDDITFVGVLV 1133
             I  A RVF EM +RN  +W+ L+ GLAV+G  +EAL +F EM+  G  P ++TFVGVL 
Sbjct: 294  IISAAQRVFHEMRERNAVSWSTLVVGLAVNGFGKEALELFKEMEIGGFVPGEVTFVGVLY 353

Query: 1134 ACSHGGLLKEGWQVFKIMRDEYGMEPKLEHYGCMV 1238
            ACSH G++ EG+  FK M+DEYG+ PK+EH+GCMV
Sbjct: 354  ACSHCGMVDEGFSYFKRMKDEYGIMPKIEHFGCMV 388


>ref|XP_004485987.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065-like
            [Cicer arietinum]
          Length = 610

 Score =  280 bits (717), Expect = 7e-73
 Identities = 148/342 (43%), Positives = 229/342 (66%), Gaps = 5/342 (1%)
 Frame = +3

Query: 228  LQQQ*GSMNRVYKLHARLIKTGRQ-NDPVSFRELLRTCTESVPECLSYARSIFDRIPSPD 404
            LQ    S +++ ++HA  I+ G   N+P   + L+ T   S+   +SYA ++F  + +P+
Sbjct: 43   LQYCASSKHKLKQIHAFSIRHGVPLNNPDMGKYLIFTVV-SLSAPMSYAYNVFTLLHNPN 101

Query: 405  TFAWNSIIRAYSYTCPSE-SLSLFSNMRRGAISPDHFTFPFVLKACSR---LQRGQELHS 572
             F WN++IR Y+ +  S  +L  +  M    + PD  T+PF+LKA S+   ++ G+ +HS
Sbjct: 102  VFTWNTMIRGYAESDNSSPALPFYRKMLVSCVEPDTHTYPFLLKAISKSLNVREGEAIHS 161

Query: 573  VILKLGFDSNIYVQNGLIYLYGSCRLVDLALKMFEEMPDRDLVSWSSMITCFTNNGFGDE 752
            V ++ GF+S I+V+N L+++Y +C   + A K+FE M +RDLV+W+S+I  F  NG  +E
Sbjct: 162  VTIRNGFESLIFVRNSLLHIYAACGDTESAYKVFELMGERDLVAWNSVINGFALNGKPNE 221

Query: 753  ALAVFKEMQLRTSIRPDEITMVSVISAVSSLGALELGRWVHLYIYRNGFNPTVSMGTALI 932
            AL++F+EM L   + PD  T+VS++SA + LGA+ELGR VH+Y+ + G    + +  +L+
Sbjct: 222  ALSLFREMSLE-GVEPDGFTVVSLLSACAELGAVELGRRVHVYLLKIGLTENLHVNNSLL 280

Query: 933  DMYSRCGSIDEAVRVFDEMPKRNVFTWTALIDGLAVHGRSREALRMFYEMKESGLRPDDI 1112
            D Y++CGSI +A +VF EM +RNV +WT+LI GLAV+G   EAL +F +M+   L P +I
Sbjct: 281  DFYAKCGSIRQAQQVFSEMGERNVVSWTSLIVGLAVNGFGEEALELFKDMERQELVPGEI 340

Query: 1113 TFVGVLVACSHGGLLKEGWQVFKIMRDEYGMEPKLEHYGCMV 1238
            TFVGVL ACSH G+L EG+  F+ M+DEYG+ P++EHYGCMV
Sbjct: 341  TFVGVLYACSHCGMLDEGFNYFRRMKDEYGIMPRIEHYGCMV 382


>ref|XP_007046082.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma cacao]
            gi|508710017|gb|EOY01914.1| Pentatricopeptide repeat
            (PPR) superfamily protein [Theobroma cacao]
          Length = 604

 Score =  280 bits (715), Expect = 1e-72
 Identities = 132/336 (39%), Positives = 228/336 (67%), Gaps = 5/336 (1%)
 Frame = +3

Query: 246  SMNRVYKLHARLIKTGRQNDPVSFRELLRTCTESVP-ECLSYARSIFDRIPSPDTFAWNS 422
            S+  V ++ A  IKT  QND     +L+  CT++     + YA  +FD++  PD   +N+
Sbjct: 41   SLREVKQIQAFAIKTHLQNDITFLTKLINFCTKNPTFTSMEYAHKVFDKVSQPDIVLFNT 100

Query: 423  IIRAYSYT-CPSESLSLFSNMRRGAISPDHFTFPFVLKACSR---LQRGQELHSVILKLG 590
            + R YS +  P++++ L S +      PD +TFP VLKACS    L+ G+++H +++KLG
Sbjct: 101  MARGYSRSNTPTQAIPLVSQLLSFGFLPDDYTFPSVLKACSSSKALEEGKQIHCLVIKLG 160

Query: 591  FDSNIYVQNGLIYLYGSCRLVDLALKMFEEMPDRDLVSWSSMITCFTNNGFGDEALAVFK 770
             + NIY+   LI +Y  C  +D A ++F++M D  ++S++++IT +      +EAL++F+
Sbjct: 161  LNHNIYICPSLISMYTECNDLDSARRVFDKMLDPCVISYNAIITGYAKCSRPNEALSLFR 220

Query: 771  EMQLRTSIRPDEITMVSVISAVSSLGALELGRWVHLYIYRNGFNPTVSMGTALIDMYSRC 950
            E+Q++ S++P ++TM+SV+S  + LGAL+LG+W+H Y+ ++GF+  + + TA+IDMY++C
Sbjct: 221  ELQVK-SLKPTDVTMLSVLSCCALLGALDLGKWIHEYVNKHGFDKYIKVSTAIIDMYAKC 279

Query: 951  GSIDEAVRVFDEMPKRNVFTWTALIDGLAVHGRSREALRMFYEMKESGLRPDDITFVGVL 1130
            GS+++AV VF+ +  R+   W+A+I   A HG+  +A+  F EM+++G++PD+ITF+G+L
Sbjct: 280  GSLEDAVCVFENITLRDTPAWSAMIVAFATHGKGYKAIETFEEMRKAGVQPDEITFLGLL 339

Query: 1131 VACSHGGLLKEGWQVFKIMRDEYGMEPKLEHYGCMV 1238
             ACSH GL++EGW  F  + ++YG+ P ++HYGCMV
Sbjct: 340  YACSHNGLVEEGWWYFSSITNKYGIVPGIKHYGCMV 375



 Score =  133 bits (335), Expect = 1e-28
 Identities = 94/319 (29%), Positives = 158/319 (49%), Gaps = 9/319 (2%)
 Frame = +3

Query: 264  KLHARLIKTGRQNDPVSFRELLRTCTESVPECLSYARSIFDRIPSPDTFAWNSIIRAYSY 443
            ++H  +IK G  ++      L+   TE     L  AR +FD++  P   ++N+II  Y+ 
Sbjct: 151  QIHCLVIKLGLNHNIYICPSLISMYTEC--NDLDSARRVFDKMLDPCVISYNAIITGYAK 208

Query: 444  TC-PSESLSLFSNMRRGAISPDHFTFPFVLKACS---RLQRGQELHSVILKLGFDSNIYV 611
               P+E+LSLF  ++  ++ P   T   VL  C+    L  G+ +H  + K GFD  I V
Sbjct: 209  CSRPNEALSLFRELQVKSLKPTDVTMLSVLSCCALLGALDLGKWIHEYVNKHGFDKYIKV 268

Query: 612  QNGLIYLYGSCRLVDLALKMFEEMPDRDLVSWSSMITCFTNNGFGDEALAVFKEMQLRTS 791
               +I +Y  C  ++ A+ +FE +  RD  +WS+MI  F  +G G +A+  F+EM+ +  
Sbjct: 269  STAIIDMYAKCGSLEDAVCVFENITLRDTPAWSAMIVAFATHGKGYKAIETFEEMR-KAG 327

Query: 792  IRPDEITMVSVISAVSSLGALELGRWVHLYIYRN-GFNPTVSMGTALIDMYSRCGSIDEA 968
            ++PDEIT + ++ A S  G +E G W    I    G  P +     ++D+  R G IDEA
Sbjct: 328  VQPDEITFLGLLYACSHNGLVEEGWWYFSSITNKYGIVPGIKHYGCMVDLLGRTGRIDEA 387

Query: 969  VRVFDEMP-KRNVFTWTALIDGLAVHG---RSREALRMFYEMKESGLRPDDITFVGVLVA 1136
             +  DE+P K     W  L+   + HG     +  +   +E+ +S     D   +  L  
Sbjct: 388  YKFIDELPIKPTPILWRTLLAACSSHGDVELGKRVIERIFELDDS--HGGDYVILSNL-- 443

Query: 1137 CSHGGLLKEGWQVFKIMRD 1193
            C+  G  ++   + K+M+D
Sbjct: 444  CARAGRWEDVDFLRKLMKD 462