BLASTX nr result
ID: Akebia26_contig00000611
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia26_contig00000611
(261 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007050621.1| Chloroplast stem-loop binding protein of 41 ... 60 2e-07
ref|XP_007050620.1| Chloroplast stem-loop binding protein of 41 ... 60 2e-07
emb|CBI32334.3| unnamed protein product [Vitis vinifera] 60 2e-07
ref|XP_002275066.1| PREDICTED: uncharacterized protein At3g63140... 60 2e-07
ref|XP_003590650.1| MRNA-binding protein [Medicago truncatula] g... 58 1e-06
ref|XP_003590649.1| MRNA-binding protein [Medicago truncatula] g... 58 1e-06
ref|XP_004495202.1| PREDICTED: chloroplast stem-loop binding pro... 57 2e-06
gb|ABK42080.1| mRNA-binding protein [Capsicum annuum] 57 2e-06
ref|XP_002306773.2| hypothetical protein POPTR_0005s23110g [Popu... 57 3e-06
ref|XP_006349675.1| PREDICTED: chloroplast stem-loop binding pro... 56 5e-06
ref|NP_001234656.1| mRNA binding protein precursor [Solanum lyco... 56 5e-06
ref|XP_002302114.1| mRNA-binding family protein [Populus trichoc... 56 6e-06
>ref|XP_007050621.1| Chloroplast stem-loop binding protein of 41 kDa isoform 2
[Theobroma cacao] gi|508702882|gb|EOX94778.1|
Chloroplast stem-loop binding protein of 41 kDa isoform
2 [Theobroma cacao]
Length = 393
Score = 60.5 bits (145), Expect = 2e-07
Identities = 29/32 (90%), Positives = 31/32 (96%)
Frame = -2
Query: 260 FEEYVKIGRDKKPMKFELDDKILESLKVAVLV 165
FEEYVKIGRDK+PM+FELDDKILESLKVAV V
Sbjct: 362 FEEYVKIGRDKEPMQFELDDKILESLKVAVAV 393
>ref|XP_007050620.1| Chloroplast stem-loop binding protein of 41 kDa isoform 1
[Theobroma cacao] gi|508702881|gb|EOX94777.1|
Chloroplast stem-loop binding protein of 41 kDa isoform
1 [Theobroma cacao]
Length = 400
Score = 60.5 bits (145), Expect = 2e-07
Identities = 29/32 (90%), Positives = 31/32 (96%)
Frame = -2
Query: 260 FEEYVKIGRDKKPMKFELDDKILESLKVAVLV 165
FEEYVKIGRDK+PM+FELDDKILESLKVAV V
Sbjct: 369 FEEYVKIGRDKEPMQFELDDKILESLKVAVAV 400
>emb|CBI32334.3| unnamed protein product [Vitis vinifera]
Length = 284
Score = 60.5 bits (145), Expect = 2e-07
Identities = 28/32 (87%), Positives = 31/32 (96%)
Frame = -2
Query: 260 FEEYVKIGRDKKPMKFELDDKILESLKVAVLV 165
F+EYVKIGRDKKPMKFE+DDKILESLKV+V V
Sbjct: 253 FDEYVKIGRDKKPMKFEIDDKILESLKVSVAV 284
>ref|XP_002275066.1| PREDICTED: uncharacterized protein At3g63140, chloroplastic [Vitis
vinifera] gi|147789789|emb|CAN73874.1| hypothetical
protein VITISV_039540 [Vitis vinifera]
Length = 397
Score = 60.5 bits (145), Expect = 2e-07
Identities = 28/32 (87%), Positives = 31/32 (96%)
Frame = -2
Query: 260 FEEYVKIGRDKKPMKFELDDKILESLKVAVLV 165
F+EYVKIGRDKKPMKFE+DDKILESLKV+V V
Sbjct: 366 FDEYVKIGRDKKPMKFEIDDKILESLKVSVAV 397
>ref|XP_003590650.1| MRNA-binding protein [Medicago truncatula]
gi|355479698|gb|AES60901.1| MRNA-binding protein
[Medicago truncatula]
Length = 419
Score = 58.2 bits (139), Expect = 1e-06
Identities = 27/32 (84%), Positives = 30/32 (93%)
Frame = -2
Query: 260 FEEYVKIGRDKKPMKFELDDKILESLKVAVLV 165
FEEY+KIGRDKKP+KFELDDKILE+LKV V V
Sbjct: 388 FEEYIKIGRDKKPIKFELDDKILEALKVPVSV 419
>ref|XP_003590649.1| MRNA-binding protein [Medicago truncatula]
gi|355479697|gb|AES60900.1| MRNA-binding protein
[Medicago truncatula]
Length = 401
Score = 58.2 bits (139), Expect = 1e-06
Identities = 27/32 (84%), Positives = 30/32 (93%)
Frame = -2
Query: 260 FEEYVKIGRDKKPMKFELDDKILESLKVAVLV 165
FEEY+KIGRDKKP+KFELDDKILE+LKV V V
Sbjct: 370 FEEYIKIGRDKKPIKFELDDKILEALKVPVSV 401
>ref|XP_004495202.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa a,
chloroplastic-like [Cicer arietinum]
Length = 403
Score = 57.4 bits (137), Expect = 2e-06
Identities = 26/32 (81%), Positives = 30/32 (93%)
Frame = -2
Query: 260 FEEYVKIGRDKKPMKFELDDKILESLKVAVLV 165
FEEY+KIGRDKKP+KFE+DDKILE+LKV V V
Sbjct: 372 FEEYIKIGRDKKPIKFEVDDKILEALKVPVAV 403
>gb|ABK42080.1| mRNA-binding protein [Capsicum annuum]
Length = 169
Score = 57.4 bits (137), Expect = 2e-06
Identities = 28/30 (93%), Positives = 28/30 (93%)
Frame = -2
Query: 260 FEEYVKIGRDKKPMKFELDDKILESLKVAV 171
FEEYVKIGRDKK MKFELDDKILESLKV V
Sbjct: 138 FEEYVKIGRDKKEMKFELDDKILESLKVPV 167
>ref|XP_002306773.2| hypothetical protein POPTR_0005s23110g [Populus trichocarpa]
gi|550339578|gb|EEE93769.2| hypothetical protein
POPTR_0005s23110g [Populus trichocarpa]
Length = 437
Score = 57.0 bits (136), Expect = 3e-06
Identities = 26/30 (86%), Positives = 29/30 (96%)
Frame = -2
Query: 260 FEEYVKIGRDKKPMKFELDDKILESLKVAV 171
F+EYVKIGRDKKPM+FE+DDKILESLKV V
Sbjct: 406 FDEYVKIGRDKKPMQFEIDDKILESLKVPV 435
>ref|XP_006349675.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa a,
chloroplastic-like [Solanum tuberosum]
Length = 401
Score = 56.2 bits (134), Expect = 5e-06
Identities = 27/30 (90%), Positives = 28/30 (93%)
Frame = -2
Query: 260 FEEYVKIGRDKKPMKFELDDKILESLKVAV 171
+EEYVKIGRDKK MKFELDDKILESLKV V
Sbjct: 370 YEEYVKIGRDKKEMKFELDDKILESLKVPV 399
>ref|NP_001234656.1| mRNA binding protein precursor [Solanum lycopersicum]
gi|26453355|gb|AAD21574.3| mRNA binding protein
precursor [Solanum lycopersicum]
Length = 407
Score = 56.2 bits (134), Expect = 5e-06
Identities = 27/30 (90%), Positives = 28/30 (93%)
Frame = -2
Query: 260 FEEYVKIGRDKKPMKFELDDKILESLKVAV 171
+EEYVKIGRDKK MKFELDDKILESLKV V
Sbjct: 376 YEEYVKIGRDKKEMKFELDDKILESLKVPV 405
>ref|XP_002302114.1| mRNA-binding family protein [Populus trichocarpa]
gi|222843840|gb|EEE81387.1| mRNA-binding family protein
[Populus trichocarpa]
Length = 404
Score = 55.8 bits (133), Expect = 6e-06
Identities = 25/30 (83%), Positives = 29/30 (96%)
Frame = -2
Query: 260 FEEYVKIGRDKKPMKFELDDKILESLKVAV 171
F++YVKIGRDKKPM+FE+DDKILESLKV V
Sbjct: 373 FDDYVKIGRDKKPMQFEIDDKILESLKVPV 402