BLASTX nr result

ID: Akebia26_contig00000611 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia26_contig00000611
         (261 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007050621.1| Chloroplast stem-loop binding protein of 41 ...    60   2e-07
ref|XP_007050620.1| Chloroplast stem-loop binding protein of 41 ...    60   2e-07
emb|CBI32334.3| unnamed protein product [Vitis vinifera]               60   2e-07
ref|XP_002275066.1| PREDICTED: uncharacterized protein At3g63140...    60   2e-07
ref|XP_003590650.1| MRNA-binding protein [Medicago truncatula] g...    58   1e-06
ref|XP_003590649.1| MRNA-binding protein [Medicago truncatula] g...    58   1e-06
ref|XP_004495202.1| PREDICTED: chloroplast stem-loop binding pro...    57   2e-06
gb|ABK42080.1| mRNA-binding protein [Capsicum annuum]                  57   2e-06
ref|XP_002306773.2| hypothetical protein POPTR_0005s23110g [Popu...    57   3e-06
ref|XP_006349675.1| PREDICTED: chloroplast stem-loop binding pro...    56   5e-06
ref|NP_001234656.1| mRNA binding protein precursor [Solanum lyco...    56   5e-06
ref|XP_002302114.1| mRNA-binding family protein [Populus trichoc...    56   6e-06

>ref|XP_007050621.1| Chloroplast stem-loop binding protein of 41 kDa isoform 2
           [Theobroma cacao] gi|508702882|gb|EOX94778.1|
           Chloroplast stem-loop binding protein of 41 kDa isoform
           2 [Theobroma cacao]
          Length = 393

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 29/32 (90%), Positives = 31/32 (96%)
 Frame = -2

Query: 260 FEEYVKIGRDKKPMKFELDDKILESLKVAVLV 165
           FEEYVKIGRDK+PM+FELDDKILESLKVAV V
Sbjct: 362 FEEYVKIGRDKEPMQFELDDKILESLKVAVAV 393


>ref|XP_007050620.1| Chloroplast stem-loop binding protein of 41 kDa isoform 1
           [Theobroma cacao] gi|508702881|gb|EOX94777.1|
           Chloroplast stem-loop binding protein of 41 kDa isoform
           1 [Theobroma cacao]
          Length = 400

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 29/32 (90%), Positives = 31/32 (96%)
 Frame = -2

Query: 260 FEEYVKIGRDKKPMKFELDDKILESLKVAVLV 165
           FEEYVKIGRDK+PM+FELDDKILESLKVAV V
Sbjct: 369 FEEYVKIGRDKEPMQFELDDKILESLKVAVAV 400


>emb|CBI32334.3| unnamed protein product [Vitis vinifera]
          Length = 284

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 28/32 (87%), Positives = 31/32 (96%)
 Frame = -2

Query: 260 FEEYVKIGRDKKPMKFELDDKILESLKVAVLV 165
           F+EYVKIGRDKKPMKFE+DDKILESLKV+V V
Sbjct: 253 FDEYVKIGRDKKPMKFEIDDKILESLKVSVAV 284


>ref|XP_002275066.1| PREDICTED: uncharacterized protein At3g63140, chloroplastic [Vitis
           vinifera] gi|147789789|emb|CAN73874.1| hypothetical
           protein VITISV_039540 [Vitis vinifera]
          Length = 397

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 28/32 (87%), Positives = 31/32 (96%)
 Frame = -2

Query: 260 FEEYVKIGRDKKPMKFELDDKILESLKVAVLV 165
           F+EYVKIGRDKKPMKFE+DDKILESLKV+V V
Sbjct: 366 FDEYVKIGRDKKPMKFEIDDKILESLKVSVAV 397


>ref|XP_003590650.1| MRNA-binding protein [Medicago truncatula]
           gi|355479698|gb|AES60901.1| MRNA-binding protein
           [Medicago truncatula]
          Length = 419

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 27/32 (84%), Positives = 30/32 (93%)
 Frame = -2

Query: 260 FEEYVKIGRDKKPMKFELDDKILESLKVAVLV 165
           FEEY+KIGRDKKP+KFELDDKILE+LKV V V
Sbjct: 388 FEEYIKIGRDKKPIKFELDDKILEALKVPVSV 419


>ref|XP_003590649.1| MRNA-binding protein [Medicago truncatula]
           gi|355479697|gb|AES60900.1| MRNA-binding protein
           [Medicago truncatula]
          Length = 401

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 27/32 (84%), Positives = 30/32 (93%)
 Frame = -2

Query: 260 FEEYVKIGRDKKPMKFELDDKILESLKVAVLV 165
           FEEY+KIGRDKKP+KFELDDKILE+LKV V V
Sbjct: 370 FEEYIKIGRDKKPIKFELDDKILEALKVPVSV 401


>ref|XP_004495202.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa a,
           chloroplastic-like [Cicer arietinum]
          Length = 403

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 26/32 (81%), Positives = 30/32 (93%)
 Frame = -2

Query: 260 FEEYVKIGRDKKPMKFELDDKILESLKVAVLV 165
           FEEY+KIGRDKKP+KFE+DDKILE+LKV V V
Sbjct: 372 FEEYIKIGRDKKPIKFEVDDKILEALKVPVAV 403


>gb|ABK42080.1| mRNA-binding protein [Capsicum annuum]
          Length = 169

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 28/30 (93%), Positives = 28/30 (93%)
 Frame = -2

Query: 260 FEEYVKIGRDKKPMKFELDDKILESLKVAV 171
           FEEYVKIGRDKK MKFELDDKILESLKV V
Sbjct: 138 FEEYVKIGRDKKEMKFELDDKILESLKVPV 167


>ref|XP_002306773.2| hypothetical protein POPTR_0005s23110g [Populus trichocarpa]
           gi|550339578|gb|EEE93769.2| hypothetical protein
           POPTR_0005s23110g [Populus trichocarpa]
          Length = 437

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 26/30 (86%), Positives = 29/30 (96%)
 Frame = -2

Query: 260 FEEYVKIGRDKKPMKFELDDKILESLKVAV 171
           F+EYVKIGRDKKPM+FE+DDKILESLKV V
Sbjct: 406 FDEYVKIGRDKKPMQFEIDDKILESLKVPV 435


>ref|XP_006349675.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa a,
           chloroplastic-like [Solanum tuberosum]
          Length = 401

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 27/30 (90%), Positives = 28/30 (93%)
 Frame = -2

Query: 260 FEEYVKIGRDKKPMKFELDDKILESLKVAV 171
           +EEYVKIGRDKK MKFELDDKILESLKV V
Sbjct: 370 YEEYVKIGRDKKEMKFELDDKILESLKVPV 399


>ref|NP_001234656.1| mRNA binding protein precursor [Solanum lycopersicum]
           gi|26453355|gb|AAD21574.3| mRNA binding protein
           precursor [Solanum lycopersicum]
          Length = 407

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 27/30 (90%), Positives = 28/30 (93%)
 Frame = -2

Query: 260 FEEYVKIGRDKKPMKFELDDKILESLKVAV 171
           +EEYVKIGRDKK MKFELDDKILESLKV V
Sbjct: 376 YEEYVKIGRDKKEMKFELDDKILESLKVPV 405


>ref|XP_002302114.1| mRNA-binding family protein [Populus trichocarpa]
           gi|222843840|gb|EEE81387.1| mRNA-binding family protein
           [Populus trichocarpa]
          Length = 404

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 25/30 (83%), Positives = 29/30 (96%)
 Frame = -2

Query: 260 FEEYVKIGRDKKPMKFELDDKILESLKVAV 171
           F++YVKIGRDKKPM+FE+DDKILESLKV V
Sbjct: 373 FDDYVKIGRDKKPMQFEIDDKILESLKVPV 402


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