BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia26_contig00000570
         (3575 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004289449.1| PREDICTED: probable polyribonucleotide nucle...   979   0.0  
ref|XP_006826324.1| hypothetical protein AMTR_s00004p00095690 [A...   966   0.0  
ref|XP_006479182.1| PREDICTED: polyribonucleotide nucleotidyltra...   963   0.0  
gb|AAC49669.1| polyribonucleotide phophorylase [Spinacia oleracea]    952   0.0  
ref|XP_007029975.1| Polyribonucleotide nucleotidyltransferase is...   949   0.0  
gb|EYU30335.1| hypothetical protein MIMGU_mgv1a000949mg [Mimulus...   946   0.0  
ref|XP_006479183.1| PREDICTED: polyribonucleotide nucleotidyltra...   905   0.0  
ref|XP_006408274.1| hypothetical protein EUTSA_v10020014mg [Eutr...   901   0.0  
ref|XP_007029977.1| Polyribonucleotide nucleotidyltransferase is...   898   0.0  
ref|NP_001058982.1| Os07g0168000 [Oryza sativa Japonica Group] g...   897   0.0  
ref|NP_187021.2| polyribonucleotide nucleotidyltransferase [Arab...   897   0.0  
gb|AAF00646.1|AC009540_23 putative polynucleotide phosphorylase ...   897   0.0  
emb|CAB85703.1| putative polynucleotide phosphorylase [Arabidops...   896   0.0  
ref|XP_002882303.1| hypothetical protein ARALYDRAFT_896385 [Arab...   896   0.0  
ref|XP_003557535.1| PREDICTED: polyribonucleotide nucleotidyltra...   895   0.0  
ref|XP_006299967.1| hypothetical protein CARUB_v10016180mg [Caps...   895   0.0  
dbj|BAJ93743.1| predicted protein [Hordeum vulgare subsp. vulgare]    878   0.0  
tpg|DAA59696.1| TPA: chloroplast RNA processing4 [Zea mays]           873   0.0  
ref|XP_007029978.1| Polyribonucleotide nucleotidyltransferase is...   849   0.0  
prf||2208281A 100RNP protein                                          946   0.0  

>ref|XP_004289449.1| PREDICTED: probable polyribonucleotide nucleotidyltransferase 1,
            chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 904

 Score =  979 bits (2531), Expect(2) = 0.0
 Identities = 490/590 (83%), Positives = 531/590 (90%), Gaps = 1/590 (0%)
 Frame = +3

Query: 981  VQQPYSIKIPVGDRHILVETGHIGRQASGAVTITDGETVVYTSVCLADVPSEPSDFFPLS 1160
            V QPYS+KIPVGDRHIL+ETGHIGRQAS +VT+TDGET+VYTSVCLAD PSEPSDFFPLS
Sbjct: 75   VVQPYSVKIPVGDRHILIETGHIGRQASASVTVTDGETIVYTSVCLADTPSEPSDFFPLS 134

Query: 1161 VNYQERFSAAGRTSGGFFKREGRAKDHEVLICRLIDRPLRPTMLKGFYHETQILSWVLSY 1340
            V+YQERFSAAGRTSGGFFKREGRAKDHEVLICRLIDRPLRPTML GFYHETQ+LSWVLSY
Sbjct: 135  VHYQERFSAAGRTSGGFFKREGRAKDHEVLICRLIDRPLRPTMLNGFYHETQVLSWVLSY 194

Query: 1341 DGLHSPDSLAVTAAGIAVALSELPHTKAIAGVRIGLVGDKYIVNPTTKEMEESELDLLLA 1520
            DGLHSPDSLAVTAAGIAVALSE+P+TK IAGVRIGLVGDK+IVNPTTKEME+SELDLLLA
Sbjct: 195  DGLHSPDSLAVTAAGIAVALSEVPNTKTIAGVRIGLVGDKFIVNPTTKEMEDSELDLLLA 254

Query: 1521 GTDSAILMIEGYCNFLPEEKLLQAVEVGHDAVRAICNEMEGLVKKCGKPKMLEAIKLPPP 1700
            GTDSAILMIEGYC+FLPEEKLLQA+EVG DAVRAICN++E LVKKCGKPKM +AIKLPPP
Sbjct: 255  GTDSAILMIEGYCDFLPEEKLLQAIEVGQDAVRAICNQVEALVKKCGKPKMFDAIKLPPP 314

Query: 1701 ELYRHVEEIAGNELVEVLQIRNKIPRRKALSALEENVLTILTEKGYIGKDETSA-AEIVP 1877
            ELY HVEEIAG+ELV  LQI +K PRRKAL +LE  VLT+LTEKGY+ KD   A +E  P
Sbjct: 315  ELYNHVEEIAGDELVRALQITHKTPRRKALLSLEGEVLTLLTEKGYVCKDTVVAGSETEP 374

Query: 1878 ELYXXXXXXXXXXXXXXXXXXXXHIKPVSRKPIPLLFSEVDVKLVFKEVTSKFLRKRIVE 2057
            +++                    HIKP SRK  PL FSEVDVKLVFKEVTSK+LR+RIVE
Sbjct: 375  DIFEDEDEDEEVIVDGEVDEGDVHIKPTSRKSTPLFFSEVDVKLVFKEVTSKYLRRRIVE 434

Query: 2058 GGKRSDGRTPSGVRLINSRCGLLPRAHGSALFTRGETQSLAVVTLGDKQMAQRIDNLVDV 2237
            GG+RSDGRTP  +R INSRCGLLPRAHGSALFTRGETQSLAVVTLGDKQMAQRIDNL+ V
Sbjct: 435  GGRRSDGRTPEEIRPINSRCGLLPRAHGSALFTRGETQSLAVVTLGDKQMAQRIDNLMGV 494

Query: 2238 DEVKRFYLQYSFPPSCVGEVGRMGAPSRREIGHGTLAERALEPILPSDDDFPYTIRVEST 2417
            DE KRFYLQY+FPPSCVGEVGR GAPSRREIGHG LAER+LEPILP DDDFPYTIRVEST
Sbjct: 495  DEWKRFYLQYTFPPSCVGEVGRNGAPSRREIGHGMLAERSLEPILPCDDDFPYTIRVEST 554

Query: 2418 ITESNGSSSMASVCGGSLALQDAGVPVKCSIAGIAMGLVLDTEEFGGDGMPLILSDITGS 2597
            ITESNGSSSMASVCGG LALQDAGVP+KCSI GIAMGLVLDTEEFGGDG PLILSDITGS
Sbjct: 555  ITESNGSSSMASVCGGCLALQDAGVPIKCSIVGIAMGLVLDTEEFGGDGSPLILSDITGS 614

Query: 2598 EDASGDMDFKVAGNENGITAFQMDIKVGGITLPIMKQALLQAREGRKHIL 2747
            EDASGDMDFKVAGNE+G+TAFQMDIKV GITLP+M++ALLQA++GRKHI+
Sbjct: 615  EDASGDMDFKVAGNEHGVTAFQMDIKVSGITLPVMRKALLQAKDGRKHII 664



 Score =  303 bits (775), Expect(2) = 0.0
 Identities = 168/263 (63%), Positives = 196/263 (74%), Gaps = 1/263 (0%)
 Frame = +2

Query: 2744 SWVKPEKVNVIIGSGGKKVKSIIEETGVEAIDTQDDGVVKITARDLASLEKSKAIIANLT 2923
            S VKP+KVN+IIGSGGKKVKSIIEETGV+AIDTQ+DG+VKITARDL SLEKSKAII NLT
Sbjct: 672  SHVKPDKVNLIIGSGGKKVKSIIEETGVDAIDTQEDGIVKITARDLLSLEKSKAIITNLT 731

Query: 2924 MVPSVGDIYRNCEIKSIAPYGVFVEVAPGREGLCHISELSSDWLAKAEDAFKVGDRVDVK 3103
            MVP+VGDIYRNCEIK+IAPYGVFVE+APGREGLCHISELSSDWLAKAEDAFKVGD VDVK
Sbjct: 732  MVPTVGDIYRNCEIKTIAPYGVFVEIAPGREGLCHISELSSDWLAKAEDAFKVGDYVDVK 791

Query: 3104 LIEINEKGQLRLSRRALLPDSSPEKTTVKQQTSSPTKESGSSQNAXXXXXXXXXXXXXXV 3283
            LIE+NEKGQLRLSRRALLPD+  E + ++Q    PT +S                     
Sbjct: 792  LIEVNEKGQLRLSRRALLPDADHENSDLRQ----PTDDS--------------------- 826

Query: 3284 EVVDEEQQSQDRGTLSKAGSPPKKVTSSEDSLLPQEKVIKRLVSSARDGAYVNKDRQKK- 3460
                ++  S D+  +    SP  K  SSE++LLPQ+K I+R V+ ARD A +N D  K+ 
Sbjct: 827  ----KDVPSSDKNKVKGTSSP--KNNSSENTLLPQKKFIRRAVNPARDRANINNDASKRS 880

Query: 3461 SSKVSSATGKDESNLVNGEAKIG 3529
            SS+V   + KDE+ LVNG A IG
Sbjct: 881  SSRVVGDSRKDENTLVNGGANIG 903


>ref|XP_006826324.1| hypothetical protein AMTR_s00004p00095690 [Amborella trichopoda]
            gi|548830638|gb|ERM93561.1| hypothetical protein
            AMTR_s00004p00095690 [Amborella trichopoda]
          Length = 939

 Score =  966 bits (2497), Expect(2) = 0.0
 Identities = 479/593 (80%), Positives = 538/593 (90%), Gaps = 1/593 (0%)
 Frame = +3

Query: 972  TQFVQQPYSIKIPVGDRHILVETGHIGRQASGAVTITDGETVVYTSVCLADVPSEPSDFF 1151
            + ++ QP+S+KIPVGDRHILVETG IGRQASGAVT+TDGET++YTSVCLADVPSEPSDFF
Sbjct: 83   SNYMPQPFSVKIPVGDRHILVETGLIGRQASGAVTVTDGETIIYTSVCLADVPSEPSDFF 142

Query: 1152 PLSVNYQERFSAAGRTSGGFFKREGRAKDHEVLICRLIDRPLRPTMLKGFYHETQILSWV 1331
            PL VNYQERFSAAGRTSGGFFKREGRA+DHE+LICRLIDRPLRPTMLKGFYHETQILSWV
Sbjct: 143  PLFVNYQERFSAAGRTSGGFFKREGRARDHELLICRLIDRPLRPTMLKGFYHETQILSWV 202

Query: 1332 LSYDGLHSPDSLAVTAAGIAVALSELPHTKAIAGVRIGLVGDKYIVNPTTKEMEESELDL 1511
            LSYDGLHSPD+LA+TAAGIAVALSE+P++KA+ GVR+GL+ D+YIVNPTTK+MEESELDL
Sbjct: 203  LSYDGLHSPDALAITAAGIAVALSEVPNSKAVTGVRVGLISDQYIVNPTTKQMEESELDL 262

Query: 1512 LLAGTDSAILMIEGYCNFLPEEKLLQAVEVGHDAVRAICNEMEGLVKKCGKPKMLEAIKL 1691
            +LAGT+ AILMIEGYCNFL E+KLL+AVE+G +AVRA+C E+E LVK+CG PKMLEAIKL
Sbjct: 263  VLAGTEDAILMIEGYCNFLSEDKLLKAVEIGQEAVRAMCKEVEALVKECGNPKMLEAIKL 322

Query: 1692 PPPELYRHVEEIAGNELVEVLQIRNKIPRRKALSALEENVLTILTEKGYIGKDETS-AAE 1868
            PPPELY++VEEIAGNELV+VLQI  KIPR KALSALEE+VLT+L EKG + K+ TS  +E
Sbjct: 323  PPPELYKNVEEIAGNELVKVLQINRKIPRIKALSALEESVLTVLAEKGLLVKEGTSVVSE 382

Query: 1869 IVPELYXXXXXXXXXXXXXXXXXXXXHIKPVSRKPIPLLFSEVDVKLVFKEVTSKFLRKR 2048
            ++PE+                     HIKPVSRKP+ LLFSEVDVKLVFKEVTSKFLR+R
Sbjct: 383  VIPEIDEDEDEDEVVIVDGEVDEGDFHIKPVSRKPVTLLFSEVDVKLVFKEVTSKFLRRR 442

Query: 2049 IVEGGKRSDGRTPSGVRLINSRCGLLPRAHGSALFTRGETQSLAVVTLGDKQMAQRIDNL 2228
            IVEGGKRSDGRTPS +R I+SRC LLPRAHGSALFTRGETQSLAVVTLGD+QMAQR+DNL
Sbjct: 443  IVEGGKRSDGRTPSELRSIHSRCRLLPRAHGSALFTRGETQSLAVVTLGDRQMAQRLDNL 502

Query: 2229 VDVDEVKRFYLQYSFPPSCVGEVGRMGAPSRREIGHGTLAERALEPILPSDDDFPYTIRV 2408
            +DVDE+K FYLQYSFPPSCVGEVGR+GAPSRREIGHG LAERALEPILPSD+DFPYTIRV
Sbjct: 503  IDVDELKHFYLQYSFPPSCVGEVGRIGAPSRREIGHGMLAERALEPILPSDEDFPYTIRV 562

Query: 2409 ESTITESNGSSSMASVCGGSLALQDAGVPVKCSIAGIAMGLVLDTEEFGGDGMPLILSDI 2588
            ESTITESNGSSSMASVCGG LAL DAGVPVKC +AG+AMG+V DT+EFGGDG PLILSDI
Sbjct: 563  ESTITESNGSSSMASVCGGCLALLDAGVPVKCPVAGVAMGMVFDTKEFGGDGTPLILSDI 622

Query: 2589 TGSEDASGDMDFKVAGNENGITAFQMDIKVGGITLPIMKQALLQAREGRKHIL 2747
            +GSEDASGDMDFKVAG E+GITAFQMDIKVGGIT+P+MKQALLQA+EGR HIL
Sbjct: 623  SGSEDASGDMDFKVAGTEDGITAFQMDIKVGGITIPVMKQALLQAKEGRTHIL 675



 Score =  308 bits (788), Expect(2) = 0.0
 Identities = 168/262 (64%), Positives = 200/262 (76%), Gaps = 2/262 (0%)
 Frame = +2

Query: 2750 VKPEKVNVIIGSGGKKVKSIIEETGVEAIDTQDDGVVKITARDLASLEKSKAIIANLTMV 2929
            VKPEKVN+IIGSGGKKVKSIIEE+GVEAID QDDGVVKITA+D+ SLEKSKAII NLTMV
Sbjct: 701  VKPEKVNIIIGSGGKKVKSIIEESGVEAIDMQDDGVVKITAKDMTSLEKSKAIITNLTMV 760

Query: 2930 PSVGDIYRNCEIKSIAPYGVFVEVAPGREGLCHISELSSDWLAKAEDAFKVGDRVDVKLI 3109
            P+VGD+YRNCEIKSIAPYGVFVE+APGREGLCHISELSS WL  AED FKVGDRVDVKLI
Sbjct: 761  PTVGDVYRNCEIKSIAPYGVFVEIAPGREGLCHISELSSSWLPNAEDIFKVGDRVDVKLI 820

Query: 3110 EINEKGQLRLSRRALLPDSSPEKTTVKQQTSSPTKESGSSQNAXXXXXXXXXXXXXXVEV 3289
            EINEKG LRLSRRALLPD  P+K++ K ++SSP+KE   +QNA               E 
Sbjct: 821  EINEKGHLRLSRRALLPDPGPDKSSAKPKSSSPSKEYSVAQNASP-------------EK 867

Query: 3290 VDEEQQSQDRGTLSKAGSPPKKVTSSEDSLLPQEKVIKRLVSSARDGAYVNKDRQKKS-- 3463
              +E+++++  + S+A  P K  T         EK I++LV +A+DG  VNK++Q KS  
Sbjct: 868  GTKEEENKEEAS-SRASQPAKVST--------PEKFIRKLV-AAKDGVNVNKEKQTKSGG 917

Query: 3464 SKVSSATGKDESNLVNGEAKIG 3529
              ++SA  KDE+ LVNGEAK+G
Sbjct: 918  KTITSAMAKDEATLVNGEAKVG 939


>ref|XP_006479182.1| PREDICTED: polyribonucleotide nucleotidyltransferase 1,
            chloroplastic-like isoform X1 [Citrus sinensis]
          Length = 916

 Score =  963 bits (2490), Expect(2) = 0.0
 Identities = 494/661 (74%), Positives = 550/661 (83%), Gaps = 2/661 (0%)
 Frame = +3

Query: 771  PHSSPFLHSLRSKNLLVSYTPSLHLQRKKPLFXXXXXXXXXXXXX-KIRIRALTEXXXXX 947
            PHSS F  S R K  L S  P     +K   F              +  +RA        
Sbjct: 16   PHSSHFSLSARCKLSLSSNCPRFSTSQKSSKFRSLSLLLSRRKYSERFSVRASATGPEVS 75

Query: 948  XXXXXXYGTQFVQQPYSIKIPVGDRHILVETGHIGRQASGAVTITDGETVVYTSVCLADV 1127
                      F  QP S+KIP GDR ILVETGH+GRQASGAVT+TDGET++YTSVCLADV
Sbjct: 76   EPVLSDALPSF-PQPVSVKIPFGDRQILVETGHMGRQASGAVTVTDGETIIYTSVCLADV 134

Query: 1128 PSEPSDFFPLSVNYQERFSAAGRTSGGFFKREGRAKDHEVLICRLIDRPLRPTMLKGFYH 1307
            PSEPSDFFPL+VNYQERFSAAGRTSGGFFKREGR KDHEVL+CRLIDRPLRPT++KGFYH
Sbjct: 135  PSEPSDFFPLNVNYQERFSAAGRTSGGFFKREGRTKDHEVLVCRLIDRPLRPTLIKGFYH 194

Query: 1308 ETQILSWVLSYDGLHSPDSLAVTAAGIAVALSELPHTKAIAGVRIGLVGDKYIVNPTTKE 1487
            ETQILSWVLSYDGLH PD+LAVTAAGIAVALSE+P++K IAGVR+GLVGDK+IVNPTT+E
Sbjct: 195  ETQILSWVLSYDGLHFPDALAVTAAGIAVALSEVPNSKVIAGVRVGLVGDKFIVNPTTQE 254

Query: 1488 MEESELDLLLAGTDSAILMIEGYCNFLPEEKLLQAVEVGHDAVRAICNEMEGLVKKCGKP 1667
            ME+S+LDLLLAG+D AILMIEGYC+FL EEKL+QAV+VG DAVR I NE++ LV+ CGKP
Sbjct: 255  MEDSQLDLLLAGSDDAILMIEGYCDFLSEEKLIQAVQVGQDAVREISNEVKALVEMCGKP 314

Query: 1668 KMLEAIKLPPPELYRHVEEIAGNELVEVLQIRNKIPRRKALSALEENVLTILTEKGYIGK 1847
            KML+ IKLPPPELY+HVEEIAG ELV+VLQI+NKIPRRKALS+LEE VLTIL+EKGY+ K
Sbjct: 315  KMLDTIKLPPPELYKHVEEIAGEELVKVLQIKNKIPRRKALSSLEEKVLTILSEKGYVSK 374

Query: 1848 DET-SAAEIVPELYXXXXXXXXXXXXXXXXXXXXHIKPVSRKPIPLLFSEVDVKLVFKEV 2024
            DET    E +P+L                     HIKP SRK  P+LFSEVDVKLVFKEV
Sbjct: 375  DETVGIVETIPDLLEDEDEDEEVVVDGEVDEGDVHIKPKSRKSTPMLFSEVDVKLVFKEV 434

Query: 2025 TSKFLRKRIVEGGKRSDGRTPSGVRLINSRCGLLPRAHGSALFTRGETQSLAVVTLGDKQ 2204
            TSKFLR+RIVEGG+RSDGR   G+R I+SRCGLLPRAHGSALFTRGETQSLAV+TLGDKQ
Sbjct: 435  TSKFLRRRIVEGGRRSDGRFADGIRPISSRCGLLPRAHGSALFTRGETQSLAVITLGDKQ 494

Query: 2205 MAQRIDNLVDVDEVKRFYLQYSFPPSCVGEVGRMGAPSRREIGHGTLAERALEPILPSDD 2384
            MAQRIDNL   DEVKRFYLQYSFPPS VGEVGR+GAPSRREIGHGTLAERALEP+LPSD+
Sbjct: 495  MAQRIDNLESDDEVKRFYLQYSFPPSSVGEVGRIGAPSRREIGHGTLAERALEPVLPSDN 554

Query: 2385 DFPYTIRVESTITESNGSSSMASVCGGSLALQDAGVPVKCSIAGIAMGLVLDTEEFGGDG 2564
            DFPYTIRVESTITESNGSSSMASVCGG LALQDAGVP+KCSIAG+AMG+VLDT+EFGGDG
Sbjct: 555  DFPYTIRVESTITESNGSSSMASVCGGCLALQDAGVPIKCSIAGVAMGMVLDTDEFGGDG 614

Query: 2565 MPLILSDITGSEDASGDMDFKVAGNENGITAFQMDIKVGGITLPIMKQALLQAREGRKHI 2744
             PLILSDITGSEDASGDMDFKVAGNE+GITAFQMDIKVGGITLP+MK+AL QA++GR+HI
Sbjct: 615  TPLILSDITGSEDASGDMDFKVAGNEDGITAFQMDIKVGGITLPVMKKALQQAKDGRRHI 674

Query: 2745 L 2747
            L
Sbjct: 675  L 675



 Score =  287 bits (734), Expect(2) = 0.0
 Identities = 155/241 (64%), Positives = 177/241 (73%), Gaps = 2/241 (0%)
 Frame = +2

Query: 2750 VKPEKVNVIIGSGGKKVKSIIEETGVEAIDTQDDGVVKITARDLASLEKSKAIIANLTMV 2929
            VKPEK+N+IIGSGGKKVKSIIEETGVEAIDT+DDG VKITA+DL+SLEKSKAII+NLTMV
Sbjct: 701  VKPEKINLIIGSGGKKVKSIIEETGVEAIDTEDDGTVKITAKDLSSLEKSKAIISNLTMV 760

Query: 2930 PSVGDIYRNCEIKSIAPYGVFVEVAPGREGLCHISELSSDWLAKAEDAFKVGDRVDVKLI 3109
            P+VGDIYRNCEIKSIAPYGVFVE+APGREGLCHISELSS+WLAKAED  KVGD VDVKLI
Sbjct: 761  PTVGDIYRNCEIKSIAPYGVFVEIAPGREGLCHISELSSNWLAKAEDVVKVGDLVDVKLI 820

Query: 3110 EINEKGQLRLSRRALLPDSSPEKTTVKQQTSSPTKESGSSQNAXXXXXXXXXXXXXXVEV 3289
            E+N+KGQLRLSR+ALLP++  E   VK  T  PTK++ +S                    
Sbjct: 821  EVNDKGQLRLSRKALLPEADAENPPVKLPTGDPTKDAAASDKL----------------- 863

Query: 3290 VDEEQQSQDRGTLSKAGSPPKKVTSSEDSLLPQE--KVIKRLVSSARDGAYVNKDRQKKS 3463
                            GSP  K +SSED++LP +  KV KR  S A+D  Y NKDR KKS
Sbjct: 864  ---------------VGSPKPKGSSSEDTVLPHKKVKVFKRPASPAKDRPYSNKDRTKKS 908

Query: 3464 S 3466
            S
Sbjct: 909  S 909


>gb|AAC49669.1| polyribonucleotide phophorylase [Spinacia oleracea]
          Length = 822

 Score =  952 bits (2461), Expect(2) = 0.0
 Identities = 496/671 (73%), Positives = 548/671 (81%), Gaps = 3/671 (0%)
 Frame = +3

Query: 744  SSLVHGGKPPHSSPFLHSLRSKN--LLVSYTPSLHLQRKKPLFXXXXXXXXXXXXXKIRI 917
            SSL H    PHSS  L S  SKN  +L+S +     +  K L              K  +
Sbjct: 2    SSLTHSC--PHSST-LPSSHSKNCKILLSASALSRYRTFKTLASLHRLLPTNSHGKKFNV 58

Query: 918  RALTEXXXXXXXXXXXYGTQFVQQPYSIKIPVGDRHILVETGHIGRQASGAVTITDGETV 1097
            RA+ +                  QPYS+KIP GDRHILVETGHIGRQASGAVT+TDGET+
Sbjct: 59   RAMAQTHVSQKHAHDSL------QPYSVKIPFGDRHILVETGHIGRQASGAVTVTDGETI 112

Query: 1098 VYTSVCLADVPSEPSDFFPLSVNYQERFSAAGRTSGGFFKREGRAKDHEVLICRLIDRPL 1277
            VYT+VC++D+PSEPSDFFPLSVNYQERFSAAGRTSGGFFKREGR KD+EVL+CRLIDRPL
Sbjct: 113  VYTTVCMSDIPSEPSDFFPLSVNYQERFSAAGRTSGGFFKREGRPKDNEVLVCRLIDRPL 172

Query: 1278 RPTMLKGFYHETQILSWVLSYDGLHSPDSLAVTAAGIAVALSELPHTKAIAGVRIGLVGD 1457
            R TMLKGFYHETQILSWVLSYDGLH PD+LAVTAAGIAVALSELPHTK +AGVR+GLVG 
Sbjct: 173  RTTMLKGFYHETQILSWVLSYDGLHPPDALAVTAAGIAVALSELPHTKPVAGVRVGLVGG 232

Query: 1458 KYIVNPTTKEMEESELDLLLAGTDSAILMIEGYCNFLPEEKLLQAVEVGHDAVRAICNEM 1637
            KYIVNPTT EME SELDL++AGTDSAILMIEGYCNFLPEEKLL+AVEVG DAVRAIC E+
Sbjct: 233  KYIVNPTTNEMENSELDLVVAGTDSAILMIEGYCNFLPEEKLLEAVEVGQDAVRAICKEV 292

Query: 1638 EGLVKKCGKPKMLEAIKLPPPELYRHVEEIAGNELVEVLQIRNKIPRRKALSALEENVLT 1817
            E LV+KCGKPKM++AIKLPPPELY+HVEEIAG+ELV  LQI+ K+PRRKAL +LEE V+ 
Sbjct: 293  EALVEKCGKPKMIDAIKLPPPELYKHVEEIAGDELVHALQIKKKLPRRKALVSLEEKVVD 352

Query: 1818 ILTEKGYIGKD-ETSAAEIVPELYXXXXXXXXXXXXXXXXXXXXHIKPVSRKPIPLLFSE 1994
            ILT++GY+GK   T   E +P+LY                    HIKP  +   PLLFSE
Sbjct: 353  ILTQRGYVGKSVATVIPETLPDLYVDEEEDEEVVVDGEVDEGDVHIKPSPKNCTPLLFSE 412

Query: 1995 VDVKLVFKEVTSKFLRKRIVEGGKRSDGRTPSGVRLINSRCGLLPRAHGSALFTRGETQS 2174
            VDVKLVFKE TSK+LRKRIVEGG+RSDGRT  GVR INSRCGLLPRAHGSALFTRGETQ+
Sbjct: 413  VDVKLVFKETTSKYLRKRIVEGGRRSDGRTSEGVRPINSRCGLLPRAHGSALFTRGETQA 472

Query: 2175 LAVVTLGDKQMAQRIDNLVDVDEVKRFYLQYSFPPSCVGEVGRMGAPSRREIGHGTLAER 2354
            LAVVTLGDKQMAQRID L   DE KRFYLQYSFPPSCVGE GR+GAPSRREIGHGTLAER
Sbjct: 473  LAVVTLGDKQMAQRIDTLEGDDESKRFYLQYSFPPSCVGEAGRVGAPSRREIGHGTLAER 532

Query: 2355 ALEPILPSDDDFPYTIRVESTITESNGSSSMASVCGGSLALQDAGVPVKCSIAGIAMGLV 2534
            ALEPILPS+D+FPYT+RVES ITESNGSSSMASVCGGSLAL DAGVPVKC IAGIAMG+V
Sbjct: 533  ALEPILPSEDEFPYTVRVESNITESNGSSSMASVCGGSLALLDAGVPVKCPIAGIAMGMV 592

Query: 2535 LDTEEFGGDGMPLILSDITGSEDASGDMDFKVAGNENGITAFQMDIKVGGITLPIMKQAL 2714
            LDT+EFGGDG PLILSDITGSEDASGDMDFKVAGN + +TAFQMDIKVGGITL +MKQAL
Sbjct: 593  LDTKEFGGDGTPLILSDITGSEDASGDMDFKVAGNADCVTAFQMDIKVGGITLSVMKQAL 652

Query: 2715 LQAREGRKHIL 2747
            LQA++GRK IL
Sbjct: 653  LQAKDGRKIIL 663



 Score =  227 bits (579), Expect(2) = 0.0
 Identities = 113/130 (86%), Positives = 122/130 (93%)
 Frame = +2

Query: 2750 VKPEKVNVIIGSGGKKVKSIIEETGVEAIDTQDDGVVKITARDLASLEKSKAIIANLTMV 2929
            V+PEKVN+IIGSGGK V+SIIE TGVEAIDTQDDG VKITARDL SLEKSKA+IANLTMV
Sbjct: 689  VRPEKVNLIIGSGGKTVRSIIEATGVEAIDTQDDGTVKITARDLESLEKSKAMIANLTMV 748

Query: 2930 PSVGDIYRNCEIKSIAPYGVFVEVAPGREGLCHISELSSDWLAKAEDAFKVGDRVDVKLI 3109
            P++GDIYRNCEIKSIAPYG FVE+APGREGLCHISELS  +LAKAEDAFKVGDRVDVKLI
Sbjct: 749  PTIGDIYRNCEIKSIAPYGAFVEIAPGREGLCHISELSPSYLAKAEDAFKVGDRVDVKLI 808

Query: 3110 EINEKGQLRL 3139
            E+NEKGQL L
Sbjct: 809  EVNEKGQLAL 818


>ref|XP_007029975.1| Polyribonucleotide nucleotidyltransferase isoform 1 [Theobroma cacao]
            gi|590640524|ref|XP_007029976.1| Polyribonucleotide
            nucleotidyltransferase isoform 1 [Theobroma cacao]
            gi|508718580|gb|EOY10477.1| Polyribonucleotide
            nucleotidyltransferase isoform 1 [Theobroma cacao]
            gi|508718581|gb|EOY10478.1| Polyribonucleotide
            nucleotidyltransferase isoform 1 [Theobroma cacao]
          Length = 946

 Score =  949 bits (2452), Expect(2) = 0.0
 Identities = 474/595 (79%), Positives = 530/595 (89%), Gaps = 1/595 (0%)
 Frame = +3

Query: 969  GTQFVQQPYSIKIPVGDRHILVETGHIGRQASGAVTITDGETVVYTSVCLADVPSEPSDF 1148
            G   + QP S+KIP GDR ILVETGHIGRQASG+V  TDGET+VYTSVCL+DVPSEPSDF
Sbjct: 89   GGSGILQPVSVKIPFGDREILVETGHIGRQASGSVMATDGETIVYTSVCLSDVPSEPSDF 148

Query: 1149 FPLSVNYQERFSAAGRTSGGFFKREGRAKDHEVLICRLIDRPLRPTMLKGFYHETQILSW 1328
            FPL+VNYQERFSAAGRTSGGF+KREGR KDHEVLICRLIDRPLRPTM KGFYHETQ+LSW
Sbjct: 149  FPLNVNYQERFSAAGRTSGGFYKREGRTKDHEVLICRLIDRPLRPTMPKGFYHETQLLSW 208

Query: 1329 VLSYDGLHSPDSLAVTAAGIAVALSELPHTKAIAGVRIGLVGDKYIVNPTTKEMEESELD 1508
            VLSYDGLHSPD+LAVTAAG+AVALSE+P++KAIAGVR+GL+GD+++VNPTTKEME+S LD
Sbjct: 209  VLSYDGLHSPDALAVTAAGLAVALSEVPNSKAIAGVRVGLLGDRFVVNPTTKEMEDSTLD 268

Query: 1509 LLLAGTDSAILMIEGYCNFLPEEKLLQAVEVGHDAVRAICNEMEGLVKKCGKPKMLEAIK 1688
            L LAGTDSAILM+EGYC+FLPEEKLL+AV+VG DAVRAIC  ++ LVKKCGKPKML+AIK
Sbjct: 269  LFLAGTDSAILMVEGYCDFLPEEKLLEAVQVGQDAVRAICTAVDALVKKCGKPKMLDAIK 328

Query: 1689 LPPPELYRHVEEIAGNELVEVLQIRNKIPRRKALSALEENVLTILTEKGYIG-KDETSAA 1865
            LPPP LYR VE+IAG+EL +VLQIR+KIPRRKA+S LEENV+ ILTEKGYI  +D +  A
Sbjct: 329  LPPPGLYRRVEKIAGDELHKVLQIRSKIPRRKAISLLEENVINILTEKGYISTEDNSGTA 388

Query: 1866 EIVPELYXXXXXXXXXXXXXXXXXXXXHIKPVSRKPIPLLFSEVDVKLVFKEVTSKFLRK 2045
            E + +                      HIKPVSRK  P LF+EVDVKLVFKEVTSKFLR+
Sbjct: 389  ETIQDWLEEEDEDEEIVVDGEVDEGDVHIKPVSRKSTP-LFTEVDVKLVFKEVTSKFLRR 447

Query: 2046 RIVEGGKRSDGRTPSGVRLINSRCGLLPRAHGSALFTRGETQSLAVVTLGDKQMAQRIDN 2225
            RIVEGGKRSDGR+P G+R I SRCGLLPRAHGSALFTRGETQSL VVTLGD+QMAQ++DN
Sbjct: 448  RIVEGGKRSDGRSPEGIRSITSRCGLLPRAHGSALFTRGETQSLVVVTLGDRQMAQKVDN 507

Query: 2226 LVDVDEVKRFYLQYSFPPSCVGEVGRMGAPSRREIGHGTLAERALEPILPSDDDFPYTIR 2405
            L +V+E KRFYLQYSFPPSCVGEVGRMGAPSRREIGHGTLAERALEPILPS+D+FPYTIR
Sbjct: 508  LANVEEFKRFYLQYSFPPSCVGEVGRMGAPSRREIGHGTLAERALEPILPSEDEFPYTIR 567

Query: 2406 VESTITESNGSSSMASVCGGSLALQDAGVPVKCSIAGIAMGLVLDTEEFGGDGMPLILSD 2585
            VESTITESNGSSSMASVCGG LALQDAGVP+KCSIAGIAMG+VLDT+EFGGDG PLILSD
Sbjct: 568  VESTITESNGSSSMASVCGGCLALQDAGVPLKCSIAGIAMGMVLDTKEFGGDGAPLILSD 627

Query: 2586 ITGSEDASGDMDFKVAGNENGITAFQMDIKVGGITLPIMKQALLQAREGRKHILG 2750
            ITGSEDASGDMD KVAG E+GITAFQMDIKVGGITLP+MK+ALLQAR+GR+ +LG
Sbjct: 628  ITGSEDASGDMDLKVAGTEDGITAFQMDIKVGGITLPVMKEALLQARDGRRRVLG 682



 Score =  273 bits (697), Expect(2) = 0.0
 Identities = 150/252 (59%), Positives = 186/252 (73%), Gaps = 4/252 (1%)
 Frame = +2

Query: 2750 VKPEKVNVIIGSGGKKVKSIIEETGVEAIDTQDDGVVKITARDLASLEKSKAIIANLTMV 2929
            V P+KVN+IIGSGGKKVKSIIEETGVEAIDTQDDG+VKITA+DL+SLEKSK+II+NLTMV
Sbjct: 707  VAPDKVNIIIGSGGKKVKSIIEETGVEAIDTQDDGIVKITAKDLSSLEKSKSIISNLTMV 766

Query: 2930 PSVGDIYRNCEIKSIAPYGVFVEVAPGREGLCHISELSSDWLAKAEDAFKVGDRVDVKLI 3109
            P+VGDIYRNCEIKSIAPYGVFVE+APGREGLCHISEL+SDWLAKAEDAFKVGDRVDVKLI
Sbjct: 767  PTVGDIYRNCEIKSIAPYGVFVEIAPGREGLCHISELTSDWLAKAEDAFKVGDRVDVKLI 826

Query: 3110 EINEKGQLRLSRRALL--PDSSPEKTTVKQQTSSPTKESGSSQNAXXXXXXXXXXXXXXV 3283
            E+N+KGQLRLSRRALL  P+++ E  + +Q T    K    S  A               
Sbjct: 827  EVNDKGQLRLSRRALLPVPETNSEDPSSEQLTGHQAKVITDSGKASDKSTPKKYVNVPKS 886

Query: 3284 EVVDEE--QQSQDRGTLSKAGSPPKKVTSSEDSLLPQEKVIKRLVSSARDGAYVNKDRQK 3457
            + + +E  +Q +D+ + +K  S  K  +S+E++LLP++KV KR+             ++ 
Sbjct: 887  DALAQEKLEQPKDKSSGTKISSSSKS-SSAENTLLPRKKVFKRI-------------KKS 932

Query: 3458 KSSKVSSATGKD 3493
             S  V+  +GKD
Sbjct: 933  TSKAVTGVSGKD 944


>gb|EYU30335.1| hypothetical protein MIMGU_mgv1a000949mg [Mimulus guttatus]
          Length = 936

 Score =  946 bits (2445), Expect(2) = 0.0
 Identities = 473/587 (80%), Positives = 526/587 (89%), Gaps = 1/587 (0%)
 Frame = +3

Query: 990  PYSIKIPVGDRHILVETGHIGRQASGAVTITDGETVVYTSVCLADVPSEPSDFFPLSVNY 1169
            P+SIKIPVGDRHILVETGHIGRQASGAVT+TDGET++YT+VCL+DVPSEPSDFFPLSV+Y
Sbjct: 102  PFSIKIPVGDRHILVETGHIGRQASGAVTVTDGETIIYTTVCLSDVPSEPSDFFPLSVHY 161

Query: 1170 QERFSAAGRTSGGFFKREGRAKDHEVLICRLIDRPLRPTMLKGFYHETQILSWVLSYDGL 1349
            QERFSAAGRTSGGFFKREG+ KDHEVLICRLIDRP+RPTM KGFYHETQILSWVLSYDG+
Sbjct: 162  QERFSAAGRTSGGFFKREGKTKDHEVLICRLIDRPIRPTMRKGFYHETQILSWVLSYDGV 221

Query: 1350 HSPDSLAVTAAGIAVALSELPHTKAIAGVRIGLVGDKYIVNPTTKEMEESELDLLLAGTD 1529
            H PDSLAVTAAGIAVALSE+P+++ IAGVRIGL+ DK++VNPT KEME+S+LDLLLAGTD
Sbjct: 222  HPPDSLAVTAAGIAVALSEVPNSETIAGVRIGLIDDKFVVNPTNKEMEDSKLDLLLAGTD 281

Query: 1530 SAILMIEGYCNFLPEEKLLQAVEVGHDAVRAICNEMEGLVKKCGKPKMLEAIKLPPPELY 1709
            SAILMIEGYC+FLPEEKLL+AVEVG +AVRAI   +E LVKKCGKPKML+AIKLPPPELY
Sbjct: 282  SAILMIEGYCDFLPEEKLLEAVEVGQNAVRAIIEAVESLVKKCGKPKMLDAIKLPPPELY 341

Query: 1710 RHVEEIAGNELVEVLQIRNKIPRRKALSALEENVLTILTEKGYIGKDETS-AAEIVPELY 1886
            +HVEEIAG+EL+E LQI+NKIPRRKALS+LE  V+ ILTE+G++ K E +   E +P+L 
Sbjct: 342  KHVEEIAGDELIEALQIKNKIPRRKALSSLEAKVIGILTEEGFVSKIEAAVTTETLPDLN 401

Query: 1887 XXXXXXXXXXXXXXXXXXXXHIKPVSRKPIPLLFSEVDVKLVFKEVTSKFLRKRIVEGGK 2066
                                 IKPV +KP PLL+SEVDVKLVFKEV+S FLR+RIVEGGK
Sbjct: 402  EDEDEDEEVVLDGEIDEGDIRIKPVPKKPTPLLYSEVDVKLVFKEVSSNFLRRRIVEGGK 461

Query: 2067 RSDGRTPSGVRLINSRCGLLPRAHGSALFTRGETQSLAVVTLGDKQMAQRIDNLVDVDEV 2246
            RSDGRTP  +R INSRCGLLPRAHGSALFTRGETQSLAVVTLGDKQMAQRIDNLVD DE 
Sbjct: 462  RSDGRTPEELRSINSRCGLLPRAHGSALFTRGETQSLAVVTLGDKQMAQRIDNLVDDDEF 521

Query: 2247 KRFYLQYSFPPSCVGEVGRMGAPSRREIGHGTLAERALEPILPSDDDFPYTIRVESTITE 2426
            KRFYLQY FPPSCVGEVGR GAPSRREIGHG LAERALE ILPS+DDFPYT+RVESTITE
Sbjct: 522  KRFYLQYCFPPSCVGEVGRAGAPSRREIGHGMLAERALERILPSEDDFPYTVRVESTITE 581

Query: 2427 SNGSSSMASVCGGSLALQDAGVPVKCSIAGIAMGLVLDTEEFGGDGMPLILSDITGSEDA 2606
            SNGSSSMASVCGG LALQDAGVPVK SIAGIAMG+VLDT+EFGGDG PLILSDITG EDA
Sbjct: 582  SNGSSSMASVCGGCLALQDAGVPVKSSIAGIAMGMVLDTKEFGGDGTPLILSDITGGEDA 641

Query: 2607 SGDMDFKVAGNENGITAFQMDIKVGGITLPIMKQALLQAREGRKHIL 2747
            SGDMDFKVAGN++G+T+FQMDIKVGGITLP+M++ALLQA+EGRK IL
Sbjct: 642  SGDMDFKVAGNDDGVTSFQMDIKVGGITLPVMRKALLQAKEGRKQIL 688



 Score =  262 bits (670), Expect(2) = 0.0
 Identities = 152/263 (57%), Positives = 182/263 (69%), Gaps = 4/263 (1%)
 Frame = +2

Query: 2750 VKPEKVNVIIGSGGKKVKSIIEETGVEAIDTQDDGVVKITARDLASLEKSKAIIANLTMV 2929
            VKP+KVN+IIGSGGKKVKSIIEETGVE+I+TQDDG+VKITARDL SLEKSKAIIA LTMV
Sbjct: 714  VKPDKVNLIIGSGGKKVKSIIEETGVESIETQDDGIVKITARDLVSLEKSKAIIARLTMV 773

Query: 2930 PSVGDIYRNCEIKSIAPYGVFVEVAPGREGLCHISELSSDWLAKAEDAFKVGDRVDVKLI 3109
             +VG+IYR+CEIKSIA YGVFVE++PGREGLCHISELS++WLAKAEDAFKVGDR+DVKLI
Sbjct: 774  STVGEIYRDCEIKSIAQYGVFVEISPGREGLCHISELSANWLAKAEDAFKVGDRIDVKLI 833

Query: 3110 EINEKGQLRLSRRALLPDSSPEKTTVKQQTSSPTKESGSSQNAXXXXXXXXXXXXXXVEV 3289
            E+NEKGQLRLSRRALLP+S+      KQQ       +G+  N                  
Sbjct: 834  EVNEKGQLRLSRRALLPESA------KQQ-------NGNKAN------------------ 862

Query: 3290 VDEEQQSQDRGTLSKAGSPPKKVT--SSEDSLLPQEKVIKRLVSSARDGAYVNKDRQKKS 3463
                      G +++ GSP  KV   +  +S LP+   +KR V S +D    +K   KK+
Sbjct: 863  ---------NGEITEDGSPDLKVAEPTEANSTLPENSFVKRFVRSGKDVKQTDKTVPKKN 913

Query: 3464 SKVS--SATGKDESNLVNGEAKI 3526
               S  + + K  S  VNGEAKI
Sbjct: 914  PVKSFINVSKKSTSAAVNGEAKI 936


>ref|XP_006479183.1| PREDICTED: polyribonucleotide nucleotidyltransferase 1,
            chloroplastic-like isoform X2 [Citrus sinensis]
          Length = 891

 Score =  905 bits (2339), Expect(2) = 0.0
 Identities = 470/661 (71%), Positives = 525/661 (79%), Gaps = 2/661 (0%)
 Frame = +3

Query: 771  PHSSPFLHSLRSKNLLVSYTPSLHLQRKKPLFXXXXXXXXXXXXX-KIRIRALTEXXXXX 947
            PHSS F  S R K  L S  P     +K   F              +  +RA        
Sbjct: 16   PHSSHFSLSARCKLSLSSNCPRFSTSQKSSKFRSLSLLLSRRKYSERFSVRASATGPEVS 75

Query: 948  XXXXXXYGTQFVQQPYSIKIPVGDRHILVETGHIGRQASGAVTITDGETVVYTSVCLADV 1127
                      F  QP S+KIP GDR ILVETGH+GRQASGAVT+TDGET++YTSVCLADV
Sbjct: 76   EPVLSDALPSF-PQPVSVKIPFGDRQILVETGHMGRQASGAVTVTDGETIIYTSVCLADV 134

Query: 1128 PSEPSDFFPLSVNYQERFSAAGRTSGGFFKREGRAKDHEVLICRLIDRPLRPTMLKGFYH 1307
            PSEPSDFFPL+VNYQERFSAAGRTSGGFFKREGR KDHEVL+CRLIDRPLRPT++KGFYH
Sbjct: 135  PSEPSDFFPLNVNYQERFSAAGRTSGGFFKREGRTKDHEVLVCRLIDRPLRPTLIKGFYH 194

Query: 1308 ETQILSWVLSYDGLHSPDSLAVTAAGIAVALSELPHTKAIAGVRIGLVGDKYIVNPTTKE 1487
            ETQILSWVLSYDGLH PD+LAVTAAGIAVALSE+P++K IAGVR+GLVGDK+IVNPTT+E
Sbjct: 195  ETQILSWVLSYDGLHFPDALAVTAAGIAVALSEVPNSKVIAGVRVGLVGDKFIVNPTTQE 254

Query: 1488 MEESELDLLLAGTDSAILMIEGYCNFLPEEKLLQAVEVGHDAVRAICNEMEGLVKKCGKP 1667
            ME+S+LDLLLAG+D AILMIEGYC+FL EEKL+QAV+VG DAVR I NE++ LV+ CGKP
Sbjct: 255  MEDSQLDLLLAGSDDAILMIEGYCDFLSEEKLIQAVQVGQDAVREISNEVKALVEMCGKP 314

Query: 1668 KMLEAIKLPPPELYRHVEEIAGNELVEVLQIRNKIPRRKALSALEENVLTILTEKGYIGK 1847
            KML+ IKLPPPELY+HVEEIAG ELV+VLQI+NKIPRRKALS+LEE VLTIL+EKGY+ K
Sbjct: 315  KMLDTIKLPPPELYKHVEEIAGEELVKVLQIKNKIPRRKALSSLEEKVLTILSEKGYVSK 374

Query: 1848 DET-SAAEIVPELYXXXXXXXXXXXXXXXXXXXXHIKPVSRKPIPLLFSEVDVKLVFKEV 2024
            DET    E +P+L                     HIKP SRK  P+              
Sbjct: 375  DETVGIVETIPDLLEDEDEDEEVVVDGEVDEGDVHIKPKSRKSTPM-------------- 420

Query: 2025 TSKFLRKRIVEGGKRSDGRTPSGVRLINSRCGLLPRAHGSALFTRGETQSLAVVTLGDKQ 2204
                       GG+RSDGR   G+R I+SRCGLLPRAHGSALFTRGETQSLAV+TLGDKQ
Sbjct: 421  -----------GGRRSDGRFADGIRPISSRCGLLPRAHGSALFTRGETQSLAVITLGDKQ 469

Query: 2205 MAQRIDNLVDVDEVKRFYLQYSFPPSCVGEVGRMGAPSRREIGHGTLAERALEPILPSDD 2384
            MAQRIDNL   DEVKRFYLQYSFPPS VGEVGR+GAPSRREIGHGTLAERALEP+LPSD+
Sbjct: 470  MAQRIDNLESDDEVKRFYLQYSFPPSSVGEVGRIGAPSRREIGHGTLAERALEPVLPSDN 529

Query: 2385 DFPYTIRVESTITESNGSSSMASVCGGSLALQDAGVPVKCSIAGIAMGLVLDTEEFGGDG 2564
            DFPYTIRVESTITESNGSSSMASVCGG LALQDAGVP+KCSIAG+AMG+VLDT+EFGGDG
Sbjct: 530  DFPYTIRVESTITESNGSSSMASVCGGCLALQDAGVPIKCSIAGVAMGMVLDTDEFGGDG 589

Query: 2565 MPLILSDITGSEDASGDMDFKVAGNENGITAFQMDIKVGGITLPIMKQALLQAREGRKHI 2744
             PLILSDITGSEDASGDMDFKVAGNE+GITAFQMDIKVGGITLP+MK+AL QA++GR+HI
Sbjct: 590  TPLILSDITGSEDASGDMDFKVAGNEDGITAFQMDIKVGGITLPVMKKALQQAKDGRRHI 649

Query: 2745 L 2747
            L
Sbjct: 650  L 650



 Score =  287 bits (734), Expect(2) = 0.0
 Identities = 155/241 (64%), Positives = 177/241 (73%), Gaps = 2/241 (0%)
 Frame = +2

Query: 2750 VKPEKVNVIIGSGGKKVKSIIEETGVEAIDTQDDGVVKITARDLASLEKSKAIIANLTMV 2929
            VKPEK+N+IIGSGGKKVKSIIEETGVEAIDT+DDG VKITA+DL+SLEKSKAII+NLTMV
Sbjct: 676  VKPEKINLIIGSGGKKVKSIIEETGVEAIDTEDDGTVKITAKDLSSLEKSKAIISNLTMV 735

Query: 2930 PSVGDIYRNCEIKSIAPYGVFVEVAPGREGLCHISELSSDWLAKAEDAFKVGDRVDVKLI 3109
            P+VGDIYRNCEIKSIAPYGVFVE+APGREGLCHISELSS+WLAKAED  KVGD VDVKLI
Sbjct: 736  PTVGDIYRNCEIKSIAPYGVFVEIAPGREGLCHISELSSNWLAKAEDVVKVGDLVDVKLI 795

Query: 3110 EINEKGQLRLSRRALLPDSSPEKTTVKQQTSSPTKESGSSQNAXXXXXXXXXXXXXXVEV 3289
            E+N+KGQLRLSR+ALLP++  E   VK  T  PTK++ +S                    
Sbjct: 796  EVNDKGQLRLSRKALLPEADAENPPVKLPTGDPTKDAAASDKL----------------- 838

Query: 3290 VDEEQQSQDRGTLSKAGSPPKKVTSSEDSLLPQE--KVIKRLVSSARDGAYVNKDRQKKS 3463
                            GSP  K +SSED++LP +  KV KR  S A+D  Y NKDR KKS
Sbjct: 839  ---------------VGSPKPKGSSSEDTVLPHKKVKVFKRPASPAKDRPYSNKDRTKKS 883

Query: 3464 S 3466
            S
Sbjct: 884  S 884


>ref|XP_006408274.1| hypothetical protein EUTSA_v10020014mg [Eutrema salsugineum]
            gi|557109420|gb|ESQ49727.1| hypothetical protein
            EUTSA_v10020014mg [Eutrema salsugineum]
          Length = 914

 Score =  901 bits (2328), Expect(2) = 0.0
 Identities = 462/616 (75%), Positives = 517/616 (83%), Gaps = 2/616 (0%)
 Frame = +3

Query: 906  KIRIRALTEXXXXXXXXXXXYGTQFVQQPYSIKIPVGDRHILVETGHIGRQASGAVTITD 1085
            +  +RAL              GT       S+KIP G+R ILVETG +GRQAS AVT+TD
Sbjct: 53   RFSVRALVRPDISDDADSVGDGTLAFPNHISVKIPFGNREILVETGLMGRQASSAVTVTD 112

Query: 1086 GETVVYTSVCLADVPSEPSDFFPLSVNYQERFSAAGRTSGGFFKREGRAKDHEVLICRLI 1265
            GET+VYTSVCL+DVPSEPSDF PL V+YQERFSA GRTSGGFFKREGR KDHEVLICRLI
Sbjct: 113  GETIVYTSVCLSDVPSEPSDFLPLYVHYQERFSAVGRTSGGFFKREGRTKDHEVLICRLI 172

Query: 1266 DRPLRPTMLKGFYHETQILSWVLSYDGLHSPDSLAVTAAGIAVALSELPHTKAIAGVRIG 1445
            DRPLRPTM KGFYHETQILSWVLSYDGLH+PD+LAVT+AGIAVALSE+P++KAIAGVR+G
Sbjct: 173  DRPLRPTMPKGFYHETQILSWVLSYDGLHAPDALAVTSAGIAVALSEVPNSKAIAGVRVG 232

Query: 1446 LVGDKYIVNPTTKEMEESELDLLLAGTDSAILMIEGYCNFLPEEKLLQAVEVGHDAVRAI 1625
            L+G  +IVNPT KEMEESELDL LAGTD+AIL IEGY NFLPEE LLQAV+VG DAV+A 
Sbjct: 233  LIGGAFIVNPTVKEMEESELDLFLAGTDTAILTIEGYSNFLPEEMLLQAVKVGQDAVQAT 292

Query: 1626 CNEMEGLVKKCGKPKMLEAIKLPPPELYRHVEEIAGNELVEVLQIRNKIPRRKALSALEE 1805
            C  +E L KK GK KML+AI+LPPPELY+HV+EIAG EL + LQI++KIPRRKA+S+LEE
Sbjct: 293  CIAIEALAKKYGKAKMLDAIRLPPPELYKHVKEIAGEELNKALQIKSKIPRRKAISSLEE 352

Query: 1806 NVLTILTEKGYIGKDETS--AAEIVPELYXXXXXXXXXXXXXXXXXXXXHIKPVSRKPIP 1979
             VLTILTEKGY+  DE +    E  P+L                     HI+P+ RKPIP
Sbjct: 353  KVLTILTEKGYV-IDEVAFGTTEAQPDLLEDEDEDEEVVPEGEVDQGDVHIRPIPRKPIP 411

Query: 1980 LLFSEVDVKLVFKEVTSKFLRKRIVEGGKRSDGRTPSGVRLINSRCGLLPRAHGSALFTR 2159
            LLFSEVDVKL FKEV+SK LR+RIVEGGKRSDGRT  G+R INSRCGLLPRAHGS+LFTR
Sbjct: 412  LLFSEVDVKLAFKEVSSKLLRRRIVEGGKRSDGRTLDGIRPINSRCGLLPRAHGSSLFTR 471

Query: 2160 GETQSLAVVTLGDKQMAQRIDNLVDVDEVKRFYLQYSFPPSCVGEVGRMGAPSRREIGHG 2339
            GETQ+LAVVTLGDKQMAQRIDNL   DE KRFYLQY+FPPS VGEVGR+GAPSRREIGHG
Sbjct: 472  GETQALAVVTLGDKQMAQRIDNLEGSDEYKRFYLQYTFPPSSVGEVGRIGAPSRREIGHG 531

Query: 2340 TLAERALEPILPSDDDFPYTIRVESTITESNGSSSMASVCGGSLALQDAGVPVKCSIAGI 2519
            TLAERALE ILPSDD+FPYTIRVEST+ ESNGSSSMASVCGG LALQDAGVPVKCS+AGI
Sbjct: 532  TLAERALETILPSDDNFPYTIRVESTVIESNGSSSMASVCGGCLALQDAGVPVKCSVAGI 591

Query: 2520 AMGLVLDTEEFGGDGMPLILSDITGSEDASGDMDFKVAGNENGITAFQMDIKVGGITLPI 2699
            AMG+V DTEEFGGDG PLILSDITG+EDASGDMDFKVAGNE+G+TAFQMDIKVGGITL I
Sbjct: 592  AMGMVWDTEEFGGDGSPLILSDITGAEDASGDMDFKVAGNEDGVTAFQMDIKVGGITLQI 651

Query: 2700 MKQALLQAREGRKHIL 2747
            M++AL+QA+ GR+HIL
Sbjct: 652  MEKALIQAKAGRRHIL 667



 Score =  238 bits (607), Expect(2) = 0.0
 Identities = 139/260 (53%), Positives = 170/260 (65%), Gaps = 1/260 (0%)
 Frame = +2

Query: 2750 VKPEKVNVIIGSGGKKVKSIIEETGVEAIDTQDDGVVKITARDLASLEKSKAIIANLTMV 2929
            V P KV  +IGSGGKKVKSIIEE+GVEAID QDDG+VKI A D+ASLE++KAII  LTMV
Sbjct: 693  VHPSKVYSLIGSGGKKVKSIIEESGVEAIDMQDDGIVKIMANDMASLERAKAIIGGLTMV 752

Query: 2930 PSVGDIYRNCEIKSIAPYGVFVEVAPGREGLCHISELSSDWLAKAEDAFKVGDRVDVKLI 3109
            P+VGDIYRNCEIKS+APYG FVE+APGREGLCHISELS++WLAK EDA+KVGDR+DVKLI
Sbjct: 753  PAVGDIYRNCEIKSMAPYGAFVEIAPGREGLCHISELSAEWLAKPEDAYKVGDRIDVKLI 812

Query: 3110 EINEKGQLRLSRRALLPDSSPEKTTVK-QQTSSPTKESGSSQNAXXXXXXXXXXXXXXVE 3286
            E+NEKGQLRLS RALLP+S  +K + K   T    K+ GS +                  
Sbjct: 813  EVNEKGQLRLSVRALLPESETDKDSQKPHPTGDSPKDKGSPRKYV--------------- 857

Query: 3287 VVDEEQQSQDRGTLSKAGSPPKKVTSSEDSLLPQEKVIKRLVSSARDGAYVNKDRQKKSS 3466
                    +DR     A         S D L+ ++K ++R             D+  KS+
Sbjct: 858  ----NASLKDRAASKVA---------SGDELVLKKKDVRRASGG---------DKPTKSN 895

Query: 3467 KVSSATGKDESNLVNGEAKI 3526
              SS+  ++ S+LVNGEA I
Sbjct: 896  --SSSNEEERSSLVNGEATI 913


>ref|XP_007029977.1| Polyribonucleotide nucleotidyltransferase isoform 3 [Theobroma cacao]
            gi|508718582|gb|EOY10479.1| Polyribonucleotide
            nucleotidyltransferase isoform 3 [Theobroma cacao]
          Length = 922

 Score =  898 bits (2320), Expect(2) = 0.0
 Identities = 452/595 (75%), Positives = 506/595 (85%), Gaps = 1/595 (0%)
 Frame = +3

Query: 969  GTQFVQQPYSIKIPVGDRHILVETGHIGRQASGAVTITDGETVVYTSVCLADVPSEPSDF 1148
            G   + QP S+KIP GDR ILVETGHIGRQASG+V  TDGET+VYTSVCL+DVPSEPSDF
Sbjct: 89   GGSGILQPVSVKIPFGDREILVETGHIGRQASGSVMATDGETIVYTSVCLSDVPSEPSDF 148

Query: 1149 FPLSVNYQERFSAAGRTSGGFFKREGRAKDHEVLICRLIDRPLRPTMLKGFYHETQILSW 1328
            FPL+VNYQERFSAAGRTSGGF+KREGR KDHEVLICRLIDRPLRPTM KGFYHETQ+LSW
Sbjct: 149  FPLNVNYQERFSAAGRTSGGFYKREGRTKDHEVLICRLIDRPLRPTMPKGFYHETQLLSW 208

Query: 1329 VLSYDGLHSPDSLAVTAAGIAVALSELPHTKAIAGVRIGLVGDKYIVNPTTKEMEESELD 1508
            VLSYDGLHSPD+LAVTAAG+AVALSE+P++KAIAGVR+GL+GD+++VNPTTKEME+S LD
Sbjct: 209  VLSYDGLHSPDALAVTAAGLAVALSEVPNSKAIAGVRVGLLGDRFVVNPTTKEMEDSTLD 268

Query: 1509 LLLAGTDSAILMIEGYCNFLPEEKLLQAVEVGHDAVRAICNEMEGLVKKCGKPKMLEAIK 1688
            L LAGTDSAILM+EGYC+FLPEEKLL+AV+VG DAVRAIC  ++ LVKKCGKPKML+AIK
Sbjct: 269  LFLAGTDSAILMVEGYCDFLPEEKLLEAVQVGQDAVRAICTAVDALVKKCGKPKMLDAIK 328

Query: 1689 LPPPELYRHVEEIAGNELVEVLQIRNKIPRRKALSALEENVLTILTEKGYIG-KDETSAA 1865
            LPPP LYR VE+IAG+EL +VLQIR+KIPRRKA+S LEENV+ ILTEKGYI  +D +  A
Sbjct: 329  LPPPGLYRRVEKIAGDELHKVLQIRSKIPRRKAISLLEENVINILTEKGYISTEDNSGTA 388

Query: 1866 EIVPELYXXXXXXXXXXXXXXXXXXXXHIKPVSRKPIPLLFSEVDVKLVFKEVTSKFLRK 2045
            E + +                      HIKPVSRK  PL                     
Sbjct: 389  ETIQDWLEEEDEDEEIVVDGEVDEGDVHIKPVSRKSTPL--------------------- 427

Query: 2046 RIVEGGKRSDGRTPSGVRLINSRCGLLPRAHGSALFTRGETQSLAVVTLGDKQMAQRIDN 2225
                GGKRSDGR+P G+R I SRCGLLPRAHGSALFTRGETQSL VVTLGD+QMAQ++DN
Sbjct: 428  ----GGKRSDGRSPEGIRSITSRCGLLPRAHGSALFTRGETQSLVVVTLGDRQMAQKVDN 483

Query: 2226 LVDVDEVKRFYLQYSFPPSCVGEVGRMGAPSRREIGHGTLAERALEPILPSDDDFPYTIR 2405
            L +V+E KRFYLQYSFPPSCVGEVGRMGAPSRREIGHGTLAERALEPILPS+D+FPYTIR
Sbjct: 484  LANVEEFKRFYLQYSFPPSCVGEVGRMGAPSRREIGHGTLAERALEPILPSEDEFPYTIR 543

Query: 2406 VESTITESNGSSSMASVCGGSLALQDAGVPVKCSIAGIAMGLVLDTEEFGGDGMPLILSD 2585
            VESTITESNGSSSMASVCGG LALQDAGVP+KCSIAGIAMG+VLDT+EFGGDG PLILSD
Sbjct: 544  VESTITESNGSSSMASVCGGCLALQDAGVPLKCSIAGIAMGMVLDTKEFGGDGAPLILSD 603

Query: 2586 ITGSEDASGDMDFKVAGNENGITAFQMDIKVGGITLPIMKQALLQAREGRKHILG 2750
            ITGSEDASGDMD KVAG E+GITAFQMDIKVGGITLP+MK+ALLQAR+GR+ +LG
Sbjct: 604  ITGSEDASGDMDLKVAGTEDGITAFQMDIKVGGITLPVMKEALLQARDGRRRVLG 658



 Score =  273 bits (697), Expect(2) = 0.0
 Identities = 150/252 (59%), Positives = 186/252 (73%), Gaps = 4/252 (1%)
 Frame = +2

Query: 2750 VKPEKVNVIIGSGGKKVKSIIEETGVEAIDTQDDGVVKITARDLASLEKSKAIIANLTMV 2929
            V P+KVN+IIGSGGKKVKSIIEETGVEAIDTQDDG+VKITA+DL+SLEKSK+II+NLTMV
Sbjct: 683  VAPDKVNIIIGSGGKKVKSIIEETGVEAIDTQDDGIVKITAKDLSSLEKSKSIISNLTMV 742

Query: 2930 PSVGDIYRNCEIKSIAPYGVFVEVAPGREGLCHISELSSDWLAKAEDAFKVGDRVDVKLI 3109
            P+VGDIYRNCEIKSIAPYGVFVE+APGREGLCHISEL+SDWLAKAEDAFKVGDRVDVKLI
Sbjct: 743  PTVGDIYRNCEIKSIAPYGVFVEIAPGREGLCHISELTSDWLAKAEDAFKVGDRVDVKLI 802

Query: 3110 EINEKGQLRLSRRALL--PDSSPEKTTVKQQTSSPTKESGSSQNAXXXXXXXXXXXXXXV 3283
            E+N+KGQLRLSRRALL  P+++ E  + +Q T    K    S  A               
Sbjct: 803  EVNDKGQLRLSRRALLPVPETNSEDPSSEQLTGHQAKVITDSGKASDKSTPKKYVNVPKS 862

Query: 3284 EVVDEE--QQSQDRGTLSKAGSPPKKVTSSEDSLLPQEKVIKRLVSSARDGAYVNKDRQK 3457
            + + +E  +Q +D+ + +K  S  K  +S+E++LLP++KV KR+             ++ 
Sbjct: 863  DALAQEKLEQPKDKSSGTKISSSSKS-SSAENTLLPRKKVFKRI-------------KKS 908

Query: 3458 KSSKVSSATGKD 3493
             S  V+  +GKD
Sbjct: 909  TSKAVTGVSGKD 920


>ref|NP_001058982.1| Os07g0168000 [Oryza sativa Japonica Group]
            gi|75118006|sp|Q69LE7.1|PNP1_ORYSJ RecName: Full=Probable
            polyribonucleotide nucleotidyltransferase 1,
            chloroplastic; AltName: Full=Polynucleotide phosphorylase
            1; Short=PNPase 1; Flags: Precursor
            gi|50509724|dbj|BAD31776.1| putative polynucleotide
            phosphorylase [Oryza sativa Japonica Group]
            gi|113610518|dbj|BAF20896.1| Os07g0168000 [Oryza sativa
            Japonica Group]
          Length = 902

 Score =  897 bits (2319), Expect(2) = 0.0
 Identities = 449/590 (76%), Positives = 516/590 (87%), Gaps = 5/590 (0%)
 Frame = +3

Query: 993  YSIKIPVGDRHILVETGHIGRQASGAVTITDGETVVYTSVCLADVPSEPSDFFPLSVNYQ 1172
            +S KIPVGDRHILVETGHIGRQAS +V +TDGET+VY+SVCLAD P++PSDFFP+SV+YQ
Sbjct: 90   FSTKIPVGDRHILVETGHIGRQASASVMVTDGETIVYSSVCLADTPNDPSDFFPMSVHYQ 149

Query: 1173 ERFSAAGRTSGGFFKREGRAKDHEVLICRLIDRPLRPTMLKGFYHETQILSWVLSYDGLH 1352
            ER SAAGRTSGGFFKREGRAKDHEVL+CRLIDRPLRPTM KGFY+ETQILSWV SYDG+H
Sbjct: 150  ERLSAAGRTSGGFFKREGRAKDHEVLVCRLIDRPLRPTMPKGFYYETQILSWVFSYDGIH 209

Query: 1353 SPDSLAVTAAGIAVALSELPHTKAIAGVRIGLVGDKYIVNPTTKEMEESELDLLLAGTDS 1532
            SPDSLA+TAAG+A+ALSE+P+ + IAGVR+G++ D+++VNPTT++M++SELDL++AGTDS
Sbjct: 210  SPDSLAITAAGVAMALSEVPNKQTIAGVRVGMINDQFVVNPTTEQMDDSELDLVMAGTDS 269

Query: 1533 AILMIEGYCNFLPEEKLLQAVEVGHDAVRAICNEMEGLVKKCGKPKMLEAIKLPPPELYR 1712
            AILMIEGYC+FL EEKLLQAVE G  A+R IC  ++GLV+KCGK KM +AI LPPPELYR
Sbjct: 270  AILMIEGYCDFLTEEKLLQAVETGQGAIREICKAIDGLVQKCGKKKMFDAIDLPPPELYR 329

Query: 1713 HVEEIAGNELVEVLQIRNKIPRRKALSALEENVLTILTEKGYIGKDETSA-----AEIVP 1877
            HVE+I+G+ELV+ LQI+ KI RRKALSALEE V+TIL+E+GY+ KDE+S      A+++ 
Sbjct: 330  HVEDISGDELVKALQIKEKILRRKALSALEEKVITILSEQGYVAKDESSGVSENLADVIE 389

Query: 1878 ELYXXXXXXXXXXXXXXXXXXXXHIKPVSRKPIPLLFSEVDVKLVFKEVTSKFLRKRIVE 2057
            E                      HIKPVSRKP   LFSEVDVKLVFKEV+SKFLR+RIVE
Sbjct: 390  E-----EDEDEVIVDGEVDEGEVHIKPVSRKPPRQLFSEVDVKLVFKEVSSKFLRRRIVE 444

Query: 2058 GGKRSDGRTPSGVRLINSRCGLLPRAHGSALFTRGETQSLAVVTLGDKQMAQRIDNLVDV 2237
            GGKRSDGR+P  +R INS+CGLLPRAHGSALFTRGETQ+LAVVTLGD QMAQRIDNLVD 
Sbjct: 445  GGKRSDGRSPCELRPINSQCGLLPRAHGSALFTRGETQALAVVTLGDYQMAQRIDNLVDT 504

Query: 2238 DEVKRFYLQYSFPPSCVGEVGRMGAPSRREIGHGTLAERALEPILPSDDDFPYTIRVEST 2417
            +E K FYLQY+FPPS VGEVGR+GAP+RREIGHG LAERALEPILP ++DFPYTIRVEST
Sbjct: 505  EESKSFYLQYTFPPSSVGEVGRIGAPNRREIGHGMLAERALEPILPPEEDFPYTIRVEST 564

Query: 2418 ITESNGSSSMASVCGGSLALQDAGVPVKCSIAGIAMGLVLDTEEFGGDGMPLILSDITGS 2597
            ITESNGSSSMASVCGG LALQDAGVP+K  +AGIAMGLVLDT EFGGDG PLILSDITG+
Sbjct: 565  ITESNGSSSMASVCGGCLALQDAGVPIKFPVAGIAMGLVLDTLEFGGDGKPLILSDITGA 624

Query: 2598 EDASGDMDFKVAGNENGITAFQMDIKVGGITLPIMKQALLQAREGRKHIL 2747
            EDASGDMDFKVAGNENGI+AFQMDIKV GITLPIM+ ALLQAR+GRKHIL
Sbjct: 625  EDASGDMDFKVAGNENGISAFQMDIKVVGITLPIMEHALLQARDGRKHIL 674



 Score =  253 bits (646), Expect(2) = 0.0
 Identities = 127/162 (78%), Positives = 143/162 (88%)
 Frame = +2

Query: 2750 VKPEKVNVIIGSGGKKVKSIIEETGVEAIDTQDDGVVKITARDLASLEKSKAIIANLTMV 2929
            VKP KVN+IIGSGGK +KSIIEETGV+AIDT DDG VKITARDL+SLEKSKAIIANLTMV
Sbjct: 700  VKPNKVNLIIGSGGKTIKSIIEETGVDAIDTGDDGTVKITARDLSSLEKSKAIIANLTMV 759

Query: 2930 PSVGDIYRNCEIKSIAPYGVFVEVAPGREGLCHISELSSDWLAKAEDAFKVGDRVDVKLI 3109
            P VG+IYRNCEIK+IAPYG FVE+APGREGLCHISELSS WLAKAEDAFKVGDR+DVKLI
Sbjct: 760  PKVGEIYRNCEIKTIAPYGAFVEIAPGREGLCHISELSSSWLAKAEDAFKVGDRIDVKLI 819

Query: 3110 EINEKGQLRLSRRALLPDSSPEKTTVKQQTSSPTKESGSSQN 3235
            EIN+KGQLRLS RALLPD++ E ++ KQQ    T+E    ++
Sbjct: 820  EINDKGQLRLSSRALLPDANQESSS-KQQAGGSTREKAPQKD 860


>ref|NP_187021.2| polyribonucleotide nucleotidyltransferase [Arabidopsis thaliana]
            gi|75151653|sp|Q8GZQ3.1|PNP1_ARATH RecName:
            Full=Polyribonucleotide nucleotidyltransferase 1,
            chloroplastic; Short=AtcpPNPase; AltName:
            Full=Polynucleotide phosphorylase 1; Short=PNPase 1;
            AltName: Full=Protein PIGMENT DEFECTIVE 326; AltName:
            Full=Protein RESISTANT TO INHIBITION WITH FSM 10; Flags:
            Precursor gi|25991185|gb|AAN76771.1|AF450480_1
            polynucleotide phosphorylase [Arabidopsis thaliana]
            gi|332640453|gb|AEE73974.1| polyribonucleotide
            nucleotidyltransferase [Arabidopsis thaliana]
          Length = 922

 Score =  897 bits (2318), Expect(2) = 0.0
 Identities = 461/616 (74%), Positives = 516/616 (83%), Gaps = 2/616 (0%)
 Frame = +3

Query: 906  KIRIRALTEXXXXXXXXXXXYGTQFVQQPYSIKIPVGDRHILVETGHIGRQASGAVTITD 1085
            K  +RAL              G+       S+KIP G+R ILVETG +GRQAS AVT+TD
Sbjct: 59   KFSVRALVRPDDTDDADSVGDGSLAFPNHVSVKIPFGNREILVETGLMGRQASSAVTVTD 118

Query: 1086 GETVVYTSVCLADVPSEPSDFFPLSVNYQERFSAAGRTSGGFFKREGRAKDHEVLICRLI 1265
            GET+VYTSVCLADVPSEPSDF PL V+YQERFSA GRTSGGFFKREGR KDHEVLICRLI
Sbjct: 119  GETIVYTSVCLADVPSEPSDFLPLYVHYQERFSAVGRTSGGFFKREGRTKDHEVLICRLI 178

Query: 1266 DRPLRPTMLKGFYHETQILSWVLSYDGLHSPDSLAVTAAGIAVALSELPHTKAIAGVRIG 1445
            DRPLRPTM KGFY+ETQILSWVLSYDGLH+PD+LAVT+AGIAVALSE+P+ KAIAGVR+G
Sbjct: 179  DRPLRPTMPKGFYNETQILSWVLSYDGLHAPDALAVTSAGIAVALSEVPNAKAIAGVRVG 238

Query: 1446 LVGDKYIVNPTTKEMEESELDLLLAGTDSAILMIEGYCNFLPEEKLLQAVEVGHDAVRAI 1625
            L+G ++IVNPT KEMEES+LDL LAGTD+AIL IEGY NFLPEE LLQAV+VG DAV+A 
Sbjct: 239  LIGGEFIVNPTVKEMEESQLDLFLAGTDTAILTIEGYSNFLPEEMLLQAVKVGQDAVQAT 298

Query: 1626 CNEMEGLVKKCGKPKMLEAIKLPPPELYRHVEEIAGNELVEVLQIRNKIPRRKALSALEE 1805
            C  +E L KK GKPKML+AI+LPPPELY+HV+E+AG EL + LQI++KI RRKA+S+LEE
Sbjct: 299  CIAIEVLAKKYGKPKMLDAIRLPPPELYKHVKELAGEELTKALQIKSKISRRKAISSLEE 358

Query: 1806 NVLTILTEKGYIGKDETS--AAEIVPELYXXXXXXXXXXXXXXXXXXXXHIKPVSRKPIP 1979
             VLTILTEKGY+  DE +    E  P+L                     HI+P+ RKPIP
Sbjct: 359  KVLTILTEKGYV-IDEVAFGTIEAQPDLLEDEDEDEEVVPEGEVDQGDVHIRPIPRKPIP 417

Query: 1980 LLFSEVDVKLVFKEVTSKFLRKRIVEGGKRSDGRTPSGVRLINSRCGLLPRAHGSALFTR 2159
            LLFSEVDVKLVFKEV+SK LR+RIVEGGKRSDGRT   +R INSRCGLLPRAHGS LFTR
Sbjct: 418  LLFSEVDVKLVFKEVSSKLLRRRIVEGGKRSDGRTLDEIRPINSRCGLLPRAHGSTLFTR 477

Query: 2160 GETQSLAVVTLGDKQMAQRIDNLVDVDEVKRFYLQYSFPPSCVGEVGRMGAPSRREIGHG 2339
            GETQ+LAVVTLGDKQMAQRIDNL   DE KRFYLQY+FPPS VGEVGR+GAPSRREIGHG
Sbjct: 478  GETQALAVVTLGDKQMAQRIDNLEGSDEYKRFYLQYTFPPSSVGEVGRIGAPSRREIGHG 537

Query: 2340 TLAERALEPILPSDDDFPYTIRVESTITESNGSSSMASVCGGSLALQDAGVPVKCSIAGI 2519
            TLAERALE ILPSDDDFPYTIRVEST+ ESNGSSSMASVCGG LALQDAGVPVKCS+AGI
Sbjct: 538  TLAERALETILPSDDDFPYTIRVESTVIESNGSSSMASVCGGCLALQDAGVPVKCSVAGI 597

Query: 2520 AMGLVLDTEEFGGDGMPLILSDITGSEDASGDMDFKVAGNENGITAFQMDIKVGGITLPI 2699
            AMG+V DTEEFGGDG PLILSDITG+EDASGDMDFKVAGNE+G+TAFQMDIKVGGITL I
Sbjct: 598  AMGMVWDTEEFGGDGSPLILSDITGAEDASGDMDFKVAGNEDGVTAFQMDIKVGGITLEI 657

Query: 2700 MKQALLQAREGRKHIL 2747
            M++AL+QA+ GR+HIL
Sbjct: 658  MEKALIQAKAGRRHIL 673



 Score =  246 bits (629), Expect(2) = 0.0
 Identities = 142/259 (54%), Positives = 174/259 (67%)
 Frame = +2

Query: 2750 VKPEKVNVIIGSGGKKVKSIIEETGVEAIDTQDDGVVKITARDLASLEKSKAIIANLTMV 2929
            V P KV  +IGSGGKKVKSIIEE+GVEAID QDDG VKI A D+ASLE++KAII+ LTMV
Sbjct: 699  VHPSKVYSLIGSGGKKVKSIIEESGVEAIDMQDDGTVKIMAIDVASLERAKAIISGLTMV 758

Query: 2930 PSVGDIYRNCEIKSIAPYGVFVEVAPGREGLCHISELSSDWLAKAEDAFKVGDRVDVKLI 3109
            PSVGDIYRNCEIKS+APYG FVE+APGREGLCHISELS++WLAK EDA+KVGDR+DVKLI
Sbjct: 759  PSVGDIYRNCEIKSMAPYGAFVEIAPGREGLCHISELSAEWLAKPEDAYKVGDRIDVKLI 818

Query: 3110 EINEKGQLRLSRRALLPDSSPEKTTVKQQTSSPTKESGSSQNAXXXXXXXXXXXXXXVEV 3289
            E+NEKGQLRLS RALLP+S  +K + KQQ +  + +  SSQ                   
Sbjct: 819  EVNEKGQLRLSVRALLPESETDKDSQKQQPAGDSTKDKSSQRKYV--------------- 863

Query: 3290 VDEEQQSQDRGTLSKAGSPPKKVTSSEDSLLPQEKVIKRLVSSARDGAYVNKDRQKKSSK 3469
                  S+DR     A +   KV SS D L+ ++K ++R    + D              
Sbjct: 864  ---NTSSKDR-----AAAGASKV-SSGDELVLKKKDVRRATGGSSD------------KT 902

Query: 3470 VSSATGKDESNLVNGEAKI 3526
            ++S +  +E +LVNGEA I
Sbjct: 903  MNSNSSTNEESLVNGEATI 921


>gb|AAF00646.1|AC009540_23 putative polynucleotide phosphorylase [Arabidopsis thaliana]
            gi|6091752|gb|AAF03462.1|AC009327_1 putative
            polynucleotide phosphorylase [Arabidopsis thaliana]
          Length = 948

 Score =  897 bits (2318), Expect(2) = 0.0
 Identities = 461/616 (74%), Positives = 516/616 (83%), Gaps = 2/616 (0%)
 Frame = +3

Query: 906  KIRIRALTEXXXXXXXXXXXYGTQFVQQPYSIKIPVGDRHILVETGHIGRQASGAVTITD 1085
            K  +RAL              G+       S+KIP G+R ILVETG +GRQAS AVT+TD
Sbjct: 85   KFSVRALVRPDDTDDADSVGDGSLAFPNHVSVKIPFGNREILVETGLMGRQASSAVTVTD 144

Query: 1086 GETVVYTSVCLADVPSEPSDFFPLSVNYQERFSAAGRTSGGFFKREGRAKDHEVLICRLI 1265
            GET+VYTSVCLADVPSEPSDF PL V+YQERFSA GRTSGGFFKREGR KDHEVLICRLI
Sbjct: 145  GETIVYTSVCLADVPSEPSDFLPLYVHYQERFSAVGRTSGGFFKREGRTKDHEVLICRLI 204

Query: 1266 DRPLRPTMLKGFYHETQILSWVLSYDGLHSPDSLAVTAAGIAVALSELPHTKAIAGVRIG 1445
            DRPLRPTM KGFY+ETQILSWVLSYDGLH+PD+LAVT+AGIAVALSE+P+ KAIAGVR+G
Sbjct: 205  DRPLRPTMPKGFYNETQILSWVLSYDGLHAPDALAVTSAGIAVALSEVPNAKAIAGVRVG 264

Query: 1446 LVGDKYIVNPTTKEMEESELDLLLAGTDSAILMIEGYCNFLPEEKLLQAVEVGHDAVRAI 1625
            L+G ++IVNPT KEMEES+LDL LAGTD+AIL IEGY NFLPEE LLQAV+VG DAV+A 
Sbjct: 265  LIGGEFIVNPTVKEMEESQLDLFLAGTDTAILTIEGYSNFLPEEMLLQAVKVGQDAVQAT 324

Query: 1626 CNEMEGLVKKCGKPKMLEAIKLPPPELYRHVEEIAGNELVEVLQIRNKIPRRKALSALEE 1805
            C  +E L KK GKPKML+AI+LPPPELY+HV+E+AG EL + LQI++KI RRKA+S+LEE
Sbjct: 325  CIAIEVLAKKYGKPKMLDAIRLPPPELYKHVKELAGEELTKALQIKSKISRRKAISSLEE 384

Query: 1806 NVLTILTEKGYIGKDETS--AAEIVPELYXXXXXXXXXXXXXXXXXXXXHIKPVSRKPIP 1979
             VLTILTEKGY+  DE +    E  P+L                     HI+P+ RKPIP
Sbjct: 385  KVLTILTEKGYV-IDEVAFGTIEAQPDLLEDEDEDEEVVPEGEVDQGDVHIRPIPRKPIP 443

Query: 1980 LLFSEVDVKLVFKEVTSKFLRKRIVEGGKRSDGRTPSGVRLINSRCGLLPRAHGSALFTR 2159
            LLFSEVDVKLVFKEV+SK LR+RIVEGGKRSDGRT   +R INSRCGLLPRAHGS LFTR
Sbjct: 444  LLFSEVDVKLVFKEVSSKLLRRRIVEGGKRSDGRTLDEIRPINSRCGLLPRAHGSTLFTR 503

Query: 2160 GETQSLAVVTLGDKQMAQRIDNLVDVDEVKRFYLQYSFPPSCVGEVGRMGAPSRREIGHG 2339
            GETQ+LAVVTLGDKQMAQRIDNL   DE KRFYLQY+FPPS VGEVGR+GAPSRREIGHG
Sbjct: 504  GETQALAVVTLGDKQMAQRIDNLEGSDEYKRFYLQYTFPPSSVGEVGRIGAPSRREIGHG 563

Query: 2340 TLAERALEPILPSDDDFPYTIRVESTITESNGSSSMASVCGGSLALQDAGVPVKCSIAGI 2519
            TLAERALE ILPSDDDFPYTIRVEST+ ESNGSSSMASVCGG LALQDAGVPVKCS+AGI
Sbjct: 564  TLAERALETILPSDDDFPYTIRVESTVIESNGSSSMASVCGGCLALQDAGVPVKCSVAGI 623

Query: 2520 AMGLVLDTEEFGGDGMPLILSDITGSEDASGDMDFKVAGNENGITAFQMDIKVGGITLPI 2699
            AMG+V DTEEFGGDG PLILSDITG+EDASGDMDFKVAGNE+G+TAFQMDIKVGGITL I
Sbjct: 624  AMGMVWDTEEFGGDGSPLILSDITGAEDASGDMDFKVAGNEDGVTAFQMDIKVGGITLEI 683

Query: 2700 MKQALLQAREGRKHIL 2747
            M++AL+QA+ GR+HIL
Sbjct: 684  MEKALIQAKAGRRHIL 699



 Score =  246 bits (629), Expect(2) = 0.0
 Identities = 142/259 (54%), Positives = 174/259 (67%)
 Frame = +2

Query: 2750 VKPEKVNVIIGSGGKKVKSIIEETGVEAIDTQDDGVVKITARDLASLEKSKAIIANLTMV 2929
            V P KV  +IGSGGKKVKSIIEE+GVEAID QDDG VKI A D+ASLE++KAII+ LTMV
Sbjct: 725  VHPSKVYSLIGSGGKKVKSIIEESGVEAIDMQDDGTVKIMAIDVASLERAKAIISGLTMV 784

Query: 2930 PSVGDIYRNCEIKSIAPYGVFVEVAPGREGLCHISELSSDWLAKAEDAFKVGDRVDVKLI 3109
            PSVGDIYRNCEIKS+APYG FVE+APGREGLCHISELS++WLAK EDA+KVGDR+DVKLI
Sbjct: 785  PSVGDIYRNCEIKSMAPYGAFVEIAPGREGLCHISELSAEWLAKPEDAYKVGDRIDVKLI 844

Query: 3110 EINEKGQLRLSRRALLPDSSPEKTTVKQQTSSPTKESGSSQNAXXXXXXXXXXXXXXVEV 3289
            E+NEKGQLRLS RALLP+S  +K + KQQ +  + +  SSQ                   
Sbjct: 845  EVNEKGQLRLSVRALLPESETDKDSQKQQPAGDSTKDKSSQRKYV--------------- 889

Query: 3290 VDEEQQSQDRGTLSKAGSPPKKVTSSEDSLLPQEKVIKRLVSSARDGAYVNKDRQKKSSK 3469
                  S+DR     A +   KV SS D L+ ++K ++R    + D              
Sbjct: 890  ---NTSSKDR-----AAAGASKV-SSGDELVLKKKDVRRATGGSSD------------KT 928

Query: 3470 VSSATGKDESNLVNGEAKI 3526
            ++S +  +E +LVNGEA I
Sbjct: 929  MNSNSSTNEESLVNGEATI 947


>emb|CAB85703.1| putative polynucleotide phosphorylase [Arabidopsis thaliana]
          Length = 922

 Score =  896 bits (2316), Expect(2) = 0.0
 Identities = 461/616 (74%), Positives = 515/616 (83%), Gaps = 2/616 (0%)
 Frame = +3

Query: 906  KIRIRALTEXXXXXXXXXXXYGTQFVQQPYSIKIPVGDRHILVETGHIGRQASGAVTITD 1085
            K  +RAL              G+       S+KIP G+R ILVETG +GRQAS AVT+TD
Sbjct: 59   KFSVRALVRPDDTDDADSVGDGSLAFPNHVSVKIPFGNREILVETGLMGRQASSAVTVTD 118

Query: 1086 GETVVYTSVCLADVPSEPSDFFPLSVNYQERFSAAGRTSGGFFKREGRAKDHEVLICRLI 1265
            GET+VYTSVCLADVPSEPSDF PL V+YQERFSA GRTSGGFFKREGR KDHEVLICRLI
Sbjct: 119  GETIVYTSVCLADVPSEPSDFLPLYVHYQERFSAVGRTSGGFFKREGRTKDHEVLICRLI 178

Query: 1266 DRPLRPTMLKGFYHETQILSWVLSYDGLHSPDSLAVTAAGIAVALSELPHTKAIAGVRIG 1445
            DRPLRPTM KGFY+ETQILSWVLSYDGLH+PD+LAVT+AGIAVALSE+P+ KAIAGVR+G
Sbjct: 179  DRPLRPTMPKGFYNETQILSWVLSYDGLHAPDALAVTSAGIAVALSEVPNAKAIAGVRVG 238

Query: 1446 LVGDKYIVNPTTKEMEESELDLLLAGTDSAILMIEGYCNFLPEEKLLQAVEVGHDAVRAI 1625
            L+G ++IVNPT KEMEES+LDL LAGTD+AIL IEGY NFLPEE LLQAV+VG DAV+A 
Sbjct: 239  LIGGEFIVNPTVKEMEESQLDLFLAGTDTAILTIEGYSNFLPEEMLLQAVKVGQDAVQAT 298

Query: 1626 CNEMEGLVKKCGKPKMLEAIKLPPPELYRHVEEIAGNELVEVLQIRNKIPRRKALSALEE 1805
            C  +E L KK GKPKML+AI+LPPPELY+HV+E+AG EL + LQI++KI RRKA+S LEE
Sbjct: 299  CIAIEVLAKKYGKPKMLDAIRLPPPELYKHVKELAGEELTKALQIKSKISRRKAISPLEE 358

Query: 1806 NVLTILTEKGYIGKDETS--AAEIVPELYXXXXXXXXXXXXXXXXXXXXHIKPVSRKPIP 1979
             VLTILTEKGY+  DE +    E  P+L                     HI+P+ RKPIP
Sbjct: 359  KVLTILTEKGYV-IDEVAFGTIEAQPDLLEDEDEDEEVVPEGEVDQGDVHIRPIPRKPIP 417

Query: 1980 LLFSEVDVKLVFKEVTSKFLRKRIVEGGKRSDGRTPSGVRLINSRCGLLPRAHGSALFTR 2159
            LLFSEVDVKLVFKEV+SK LR+RIVEGGKRSDGRT   +R INSRCGLLPRAHGS LFTR
Sbjct: 418  LLFSEVDVKLVFKEVSSKLLRRRIVEGGKRSDGRTLDEIRPINSRCGLLPRAHGSTLFTR 477

Query: 2160 GETQSLAVVTLGDKQMAQRIDNLVDVDEVKRFYLQYSFPPSCVGEVGRMGAPSRREIGHG 2339
            GETQ+LAVVTLGDKQMAQRIDNL   DE KRFYLQY+FPPS VGEVGR+GAPSRREIGHG
Sbjct: 478  GETQALAVVTLGDKQMAQRIDNLEGSDEYKRFYLQYTFPPSSVGEVGRIGAPSRREIGHG 537

Query: 2340 TLAERALEPILPSDDDFPYTIRVESTITESNGSSSMASVCGGSLALQDAGVPVKCSIAGI 2519
            TLAERALE ILPSDDDFPYTIRVEST+ ESNGSSSMASVCGG LALQDAGVPVKCS+AGI
Sbjct: 538  TLAERALETILPSDDDFPYTIRVESTVIESNGSSSMASVCGGCLALQDAGVPVKCSVAGI 597

Query: 2520 AMGLVLDTEEFGGDGMPLILSDITGSEDASGDMDFKVAGNENGITAFQMDIKVGGITLPI 2699
            AMG+V DTEEFGGDG PLILSDITG+EDASGDMDFKVAGNE+G+TAFQMDIKVGGITL I
Sbjct: 598  AMGMVWDTEEFGGDGSPLILSDITGAEDASGDMDFKVAGNEDGVTAFQMDIKVGGITLEI 657

Query: 2700 MKQALLQAREGRKHIL 2747
            M++AL+QA+ GR+HIL
Sbjct: 658  MEKALIQAKAGRRHIL 673



 Score =  245 bits (625), Expect(2) = 0.0
 Identities = 141/259 (54%), Positives = 174/259 (67%)
 Frame = +2

Query: 2750 VKPEKVNVIIGSGGKKVKSIIEETGVEAIDTQDDGVVKITARDLASLEKSKAIIANLTMV 2929
            V P KV  +IGSGGKKVKSIIEE+GVEAID QDDG VKI A D+ASLE++KAII+ LTMV
Sbjct: 699  VHPSKVYSLIGSGGKKVKSIIEESGVEAIDMQDDGTVKIMAIDVASLERAKAIISGLTMV 758

Query: 2930 PSVGDIYRNCEIKSIAPYGVFVEVAPGREGLCHISELSSDWLAKAEDAFKVGDRVDVKLI 3109
            PSVGDIYRNCEIKS+APYG FVE+APGREGLCHISELS++WLAK EDA+KVGDR+DVKLI
Sbjct: 759  PSVGDIYRNCEIKSMAPYGAFVEIAPGREGLCHISELSAEWLAKPEDAYKVGDRIDVKLI 818

Query: 3110 EINEKGQLRLSRRALLPDSSPEKTTVKQQTSSPTKESGSSQNAXXXXXXXXXXXXXXVEV 3289
            E+NE+GQLRLS RALLP+S  +K + KQQ +  + +  SSQ                   
Sbjct: 819  EVNEEGQLRLSVRALLPESETDKDSQKQQPAGDSTKDKSSQRKYV--------------- 863

Query: 3290 VDEEQQSQDRGTLSKAGSPPKKVTSSEDSLLPQEKVIKRLVSSARDGAYVNKDRQKKSSK 3469
                  S+DR     A +   KV SS D L+ ++K ++R    + D              
Sbjct: 864  ---NTSSKDR-----AAAGASKV-SSGDELVLKKKDVRRATGGSSD------------KT 902

Query: 3470 VSSATGKDESNLVNGEAKI 3526
            ++S +  +E +LVNGEA I
Sbjct: 903  MNSNSSTNEESLVNGEATI 921


>ref|XP_002882303.1| hypothetical protein ARALYDRAFT_896385 [Arabidopsis lyrata subsp.
            lyrata] gi|297328143|gb|EFH58562.1| hypothetical protein
            ARALYDRAFT_896385 [Arabidopsis lyrata subsp. lyrata]
          Length = 922

 Score =  896 bits (2315), Expect(2) = 0.0
 Identities = 460/616 (74%), Positives = 516/616 (83%), Gaps = 2/616 (0%)
 Frame = +3

Query: 906  KIRIRALTEXXXXXXXXXXXYGTQFVQQPYSIKIPVGDRHILVETGHIGRQASGAVTITD 1085
            K  +RAL              G+       S+KIP G+R ILVETG +GRQAS AVT+TD
Sbjct: 59   KFSVRALVRPDVTEDADSVGDGSLAFPNHVSVKIPFGNREILVETGLMGRQASSAVTVTD 118

Query: 1086 GETVVYTSVCLADVPSEPSDFFPLSVNYQERFSAAGRTSGGFFKREGRAKDHEVLICRLI 1265
            GET+VYTSVCLADVPSEPSDF PL V+YQERFSA GRTSGGFFKREGR KDHEVLICRLI
Sbjct: 119  GETIVYTSVCLADVPSEPSDFLPLYVHYQERFSAVGRTSGGFFKREGRTKDHEVLICRLI 178

Query: 1266 DRPLRPTMLKGFYHETQILSWVLSYDGLHSPDSLAVTAAGIAVALSELPHTKAIAGVRIG 1445
            DRPLRPTM KGFY+ETQILSWVLSYDGLH+PD+LAVT+AGIAVALSE+P+ KAIAGVR+G
Sbjct: 179  DRPLRPTMPKGFYNETQILSWVLSYDGLHAPDALAVTSAGIAVALSEVPNAKAIAGVRVG 238

Query: 1446 LVGDKYIVNPTTKEMEESELDLLLAGTDSAILMIEGYCNFLPEEKLLQAVEVGHDAVRAI 1625
            L+G ++IVNPT KEMEES+LDL LAGTD+AIL IEGY NFLPEE LL+AV+VG DAV+A 
Sbjct: 239  LIGGEFIVNPTVKEMEESQLDLFLAGTDTAILTIEGYSNFLPEEMLLEAVKVGQDAVQAT 298

Query: 1626 CNEMEGLVKKCGKPKMLEAIKLPPPELYRHVEEIAGNELVEVLQIRNKIPRRKALSALEE 1805
            C  +E L KK GKPKML+AI+LPPPELY+HV+E+AG EL + LQI++KI RRKA+S+LEE
Sbjct: 299  CIAIEVLAKKYGKPKMLDAIRLPPPELYKHVKELAGEELTKALQIKSKISRRKAISSLEE 358

Query: 1806 NVLTILTEKGYIGKDETS--AAEIVPELYXXXXXXXXXXXXXXXXXXXXHIKPVSRKPIP 1979
             VLTILTEKGY+  DE +    E  P+L                     HI+P+ RKPIP
Sbjct: 359  KVLTILTEKGYV-IDEVAFGTIEAQPDLLEDEDEDEEVVPEGEVDQGDVHIRPIPRKPIP 417

Query: 1980 LLFSEVDVKLVFKEVTSKFLRKRIVEGGKRSDGRTPSGVRLINSRCGLLPRAHGSALFTR 2159
            LLFSEVDVKLVFKEV+SK LR+RIVEGGKRSDGRT   +R INSRCGLLPRAHGS LFTR
Sbjct: 418  LLFSEVDVKLVFKEVSSKLLRRRIVEGGKRSDGRTLDEIRPINSRCGLLPRAHGSTLFTR 477

Query: 2160 GETQSLAVVTLGDKQMAQRIDNLVDVDEVKRFYLQYSFPPSCVGEVGRMGAPSRREIGHG 2339
            GETQ+LAVVTLGDKQMAQRIDNL   DE KRFYLQY+FPPS VGEVGR+GAPSRREIGHG
Sbjct: 478  GETQALAVVTLGDKQMAQRIDNLEGSDEYKRFYLQYTFPPSSVGEVGRIGAPSRREIGHG 537

Query: 2340 TLAERALEPILPSDDDFPYTIRVESTITESNGSSSMASVCGGSLALQDAGVPVKCSIAGI 2519
            TLAERALE ILPSDDDFPYTIRVEST+ ESNGSSSMASVCGG LALQDAGVPVKCS+AGI
Sbjct: 538  TLAERALETILPSDDDFPYTIRVESTVIESNGSSSMASVCGGCLALQDAGVPVKCSVAGI 597

Query: 2520 AMGLVLDTEEFGGDGMPLILSDITGSEDASGDMDFKVAGNENGITAFQMDIKVGGITLPI 2699
            AMG+V DTEEFGGDG PLILSDITG+EDASGDMDFKVAGNE+G+TAFQMDIKVGGITL I
Sbjct: 598  AMGMVWDTEEFGGDGSPLILSDITGAEDASGDMDFKVAGNEDGVTAFQMDIKVGGITLEI 657

Query: 2700 MKQALLQAREGRKHIL 2747
            M++AL+QA+ GR+HIL
Sbjct: 658  MEKALIQAKAGRRHIL 673



 Score =  246 bits (629), Expect(2) = 0.0
 Identities = 145/260 (55%), Positives = 177/260 (68%), Gaps = 1/260 (0%)
 Frame = +2

Query: 2750 VKPEKVNVIIGSGGKKVKSIIEETGVEAIDTQDDGVVKITARDLASLEKSKAIIANLTMV 2929
            V P KV  +IGSGGKKVKSIIEE+GVEAID QDDG VKI A D+ASLE++KAII+ LTMV
Sbjct: 699  VHPSKVYSLIGSGGKKVKSIIEESGVEAIDMQDDGTVKIMAIDVASLERAKAIISGLTMV 758

Query: 2930 PSVGDIYRNCEIKSIAPYGVFVEVAPGREGLCHISELSSDWLAKAEDAFKVGDRVDVKLI 3109
            P+VGDIYRNCEIKS+APYG FVE+APGREGLCHISELS++WLAK EDA+KVGDR+DVKLI
Sbjct: 759  PAVGDIYRNCEIKSMAPYGAFVEIAPGREGLCHISELSAEWLAKPEDAYKVGDRIDVKLI 818

Query: 3110 EINEKGQLRLSRRALLPDSSPEKTTVKQQ-TSSPTKESGSSQNAXXXXXXXXXXXXXXVE 3286
            E+NEKGQLRLS RALLP+S  +K + KQQ     TK+ GS +                  
Sbjct: 819  EVNEKGQLRLSVRALLPESETDKDSQKQQPAGDSTKDKGSQRKYV--------------- 863

Query: 3287 VVDEEQQSQDRGTLSKAGSPPKKVTSSEDSLLPQEKVIKRLVSSARDGAYVNKDRQKKSS 3466
                   S+DR     A +   KV SS D L+ ++K ++R    + D          K+ 
Sbjct: 864  ----NTSSKDR-----AAAGASKV-SSGDELVLKKKDVRRATGGSSD----------KTM 903

Query: 3467 KVSSATGKDESNLVNGEAKI 3526
            K +S+T  +E +LVNGEA I
Sbjct: 904  KSNSST--NEESLVNGEATI 921


>ref|XP_003557535.1| PREDICTED: polyribonucleotide nucleotidyltransferase-like
            [Brachypodium distachyon]
          Length = 900

 Score =  895 bits (2314), Expect(2) = 0.0
 Identities = 449/590 (76%), Positives = 516/590 (87%), Gaps = 5/590 (0%)
 Frame = +3

Query: 993  YSIKIPVGDRHILVETGHIGRQASGAVTITDGETVVYTSVCLADVPSEPSDFFPLSVNYQ 1172
            +S+KIPVGDRHILVETGHIGRQAS +V +TDGET++Y SVC+AD PS+PSDFFP+SV+YQ
Sbjct: 88   FSVKIPVGDRHILVETGHIGRQASASVMVTDGETIIYCSVCMADTPSDPSDFFPMSVHYQ 147

Query: 1173 ERFSAAGRTSGGFFKREGRAKDHEVLICRLIDRPLRPTMLKGFYHETQILSWVLSYDGLH 1352
            ER SAAGRTSGGFFKREGRAKDHEVL+CRLIDRPLRPTM KGFY+ETQIL+WV SYDG+H
Sbjct: 148  ERLSAAGRTSGGFFKREGRAKDHEVLVCRLIDRPLRPTMPKGFYYETQILAWVFSYDGIH 207

Query: 1353 SPDSLAVTAAGIAVALSELPHTKAIAGVRIGLVGDKYIVNPTTKEMEESELDLLLAGTDS 1532
            SPD LAVTAAGIA+ALSE+P+ + IAGVRIG++ D++++NPTT+EM++SELDL++AGTDS
Sbjct: 208  SPDCLAVTAAGIAMALSEVPNKQTIAGVRIGMINDQFVINPTTEEMKDSELDLMMAGTDS 267

Query: 1533 AILMIEGYCNFLPEEKLLQAVEVGHDAVRAICNEMEGLVKKCGKPKMLEAIKLPPPELYR 1712
            AILMIEG+C+FL EEKLLQAVE G  A+R IC  ++ LV+ CGK KM+EAI LPPPELYR
Sbjct: 268  AILMIEGFCDFLTEEKLLQAVETGQVAIREICKAIDVLVQTCGKKKMVEAINLPPPELYR 327

Query: 1713 HVEEIAGNELVEVLQIRNKIPRRKALSALEENVLTILTEKGYIGKDETSA-----AEIVP 1877
            HVE+I+G+ELV+ LQI+ KIPRRKALSALEENV+TIL+E+GY+ KDE+S      A+IV 
Sbjct: 328  HVEDISGDELVKALQIKQKIPRRKALSALEENVITILSEQGYVSKDESSGVIENLADIVE 387

Query: 1878 ELYXXXXXXXXXXXXXXXXXXXXHIKPVSRKPIPLLFSEVDVKLVFKEVTSKFLRKRIVE 2057
            E                      HIKPVSRKP   LFSEVDVKLVFKEV+SKFLR+RIV+
Sbjct: 388  E-----EDEDEVIVDGEVDEGEVHIKPVSRKPPRQLFSEVDVKLVFKEVSSKFLRRRIVQ 442

Query: 2058 GGKRSDGRTPSGVRLINSRCGLLPRAHGSALFTRGETQSLAVVTLGDKQMAQRIDNLVDV 2237
            GGKRSDGR+P  +R INS+CGLLPRAHGSALFTRGETQ+LAVVTLGD QMAQRID LVD 
Sbjct: 443  GGKRSDGRSPCELRPINSQCGLLPRAHGSALFTRGETQALAVVTLGDYQMAQRIDTLVDT 502

Query: 2238 DEVKRFYLQYSFPPSCVGEVGRMGAPSRREIGHGTLAERALEPILPSDDDFPYTIRVEST 2417
            +E K FYLQY+FPPS VGEVGR GAP+RREIGHG LAERALEPILPS+ DFPYTIRVEST
Sbjct: 503  EESKSFYLQYAFPPSSVGEVGRTGAPNRREIGHGMLAERALEPILPSEGDFPYTIRVEST 562

Query: 2418 ITESNGSSSMASVCGGSLALQDAGVPVKCSIAGIAMGLVLDTEEFGGDGMPLILSDITGS 2597
            ITESNGSSSMASVCGG LALQDAGVP+K  +AGIAMGLVLDT+EFGGDG PLILSDITGS
Sbjct: 563  ITESNGSSSMASVCGGCLALQDAGVPIKFPVAGIAMGLVLDTQEFGGDGTPLILSDITGS 622

Query: 2598 EDASGDMDFKVAGNENGITAFQMDIKVGGITLPIMKQALLQAREGRKHIL 2747
            EDASGDMDFKVAGNE+GI+AFQMDIKV GITLP+M++ALLQAR+GRKHIL
Sbjct: 623  EDASGDMDFKVAGNEHGISAFQMDIKVVGITLPVMERALLQARDGRKHIL 672



 Score =  241 bits (616), Expect(2) = 0.0
 Identities = 120/156 (76%), Positives = 137/156 (87%)
 Frame = +2

Query: 2750 VKPEKVNVIIGSGGKKVKSIIEETGVEAIDTQDDGVVKITARDLASLEKSKAIIANLTMV 2929
            VKP KVN+IIGSGG+ +KSI+EETGV AID +DDG VKITARD+ SLEKSK IIANLTMV
Sbjct: 698  VKPNKVNLIIGSGGRTIKSILEETGVYAIDARDDGTVKITARDMESLEKSKTIIANLTMV 757

Query: 2930 PSVGDIYRNCEIKSIAPYGVFVEVAPGREGLCHISELSSDWLAKAEDAFKVGDRVDVKLI 3109
            P VG+I+RNCEIK+IAPYG FVE+APGREGLCHISELSS WLAKAEDA+KVGDR+DVKLI
Sbjct: 758  PKVGEIFRNCEIKTIAPYGAFVEIAPGREGLCHISELSSSWLAKAEDAYKVGDRIDVKLI 817

Query: 3110 EINEKGQLRLSRRALLPDSSPEKTTVKQQTSSPTKE 3217
            EIN+KGQLRLS +ALLPD+  E ++ KQQT    KE
Sbjct: 818  EINDKGQLRLSSKALLPDADQEPSS-KQQTRGSAKE 852


>ref|XP_006299967.1| hypothetical protein CARUB_v10016180mg [Capsella rubella]
            gi|482568676|gb|EOA32865.1| hypothetical protein
            CARUB_v10016180mg [Capsella rubella]
          Length = 922

 Score =  895 bits (2312), Expect(2) = 0.0
 Identities = 458/616 (74%), Positives = 514/616 (83%), Gaps = 2/616 (0%)
 Frame = +3

Query: 906  KIRIRALTEXXXXXXXXXXXYGTQFVQQPYSIKIPVGDRHILVETGHIGRQASGAVTITD 1085
            K  +RAL              G        S+KIP G+R ILVETG +GRQAS AVT+TD
Sbjct: 60   KFSVRALVRPDATEEADSVGDGALAFPNHVSVKIPFGNREILVETGLMGRQASSAVTVTD 119

Query: 1086 GETVVYTSVCLADVPSEPSDFFPLSVNYQERFSAAGRTSGGFFKREGRAKDHEVLICRLI 1265
            GET+VYT+VCLADVPSEPSDF PL V+YQERFSA GRTSGGFFKREGR KDHEVLICRLI
Sbjct: 120  GETIVYTTVCLADVPSEPSDFLPLYVHYQERFSAVGRTSGGFFKREGRTKDHEVLICRLI 179

Query: 1266 DRPLRPTMLKGFYHETQILSWVLSYDGLHSPDSLAVTAAGIAVALSELPHTKAIAGVRIG 1445
            DRPLRPTM KGFY+ETQILSWVLSYDGLH+PD+LAVT+AGIAVALSE+P+ KA+AGVR+G
Sbjct: 180  DRPLRPTMPKGFYNETQILSWVLSYDGLHAPDALAVTSAGIAVALSEVPNAKAVAGVRVG 239

Query: 1446 LVGDKYIVNPTTKEMEESELDLLLAGTDSAILMIEGYCNFLPEEKLLQAVEVGHDAVRAI 1625
            L+G ++IVNPT KEMEES+LDL LAGTD+AIL IEGY NFLPEE LLQAV VG DAV+A 
Sbjct: 240  LIGGQFIVNPTVKEMEESQLDLFLAGTDTAILTIEGYSNFLPEEMLLQAVRVGQDAVQAT 299

Query: 1626 CNEMEGLVKKCGKPKMLEAIKLPPPELYRHVEEIAGNELVEVLQIRNKIPRRKALSALEE 1805
            C  +E L KK GKPKML+AI+LPPPELY+HV+E+AG EL + LQI++KI RRKA+S+LEE
Sbjct: 300  CIAIEALAKKYGKPKMLDAIRLPPPELYKHVKELAGEELSKALQIKSKISRRKAISSLEE 359

Query: 1806 NVLTILTEKGYIGKDETS--AAEIVPELYXXXXXXXXXXXXXXXXXXXXHIKPVSRKPIP 1979
             VLTILTEKGY+  DE +    E  P+L                     HI+P+ RKPIP
Sbjct: 360  KVLTILTEKGYV-IDEVAFGTIEAQPDLLEDEDEDEEVVPEGEVDQGDVHIRPIPRKPIP 418

Query: 1980 LLFSEVDVKLVFKEVTSKFLRKRIVEGGKRSDGRTPSGVRLINSRCGLLPRAHGSALFTR 2159
            LLFSEVDVKLVFKEV+SK LR+RIVEGGKRSDGRT   +R INSRCGLLPRAHGS LFTR
Sbjct: 419  LLFSEVDVKLVFKEVSSKLLRRRIVEGGKRSDGRTLDEIRPINSRCGLLPRAHGSTLFTR 478

Query: 2160 GETQSLAVVTLGDKQMAQRIDNLVDVDEVKRFYLQYSFPPSCVGEVGRMGAPSRREIGHG 2339
            GETQ+LAVVTLGDKQMAQRIDNL   DE KRFYLQY+FPPS VGEVGR+GAPSRRE+GHG
Sbjct: 479  GETQALAVVTLGDKQMAQRIDNLEGSDEYKRFYLQYTFPPSSVGEVGRIGAPSRREVGHG 538

Query: 2340 TLAERALEPILPSDDDFPYTIRVESTITESNGSSSMASVCGGSLALQDAGVPVKCSIAGI 2519
            TLAERALE ILPSDDDFPYTIRVEST+ ESNGSSSMASVCGG LALQDAGVPVKCS+AGI
Sbjct: 539  TLAERALETILPSDDDFPYTIRVESTVIESNGSSSMASVCGGCLALQDAGVPVKCSVAGI 598

Query: 2520 AMGLVLDTEEFGGDGMPLILSDITGSEDASGDMDFKVAGNENGITAFQMDIKVGGITLPI 2699
            AMG+V DTEEFGGDG PLILSDITG+EDASGDMDFKVAGNE+G+TAFQMDIKVGGITL I
Sbjct: 599  AMGMVWDTEEFGGDGSPLILSDITGAEDASGDMDFKVAGNEDGVTAFQMDIKVGGITLEI 658

Query: 2700 MKQALLQAREGRKHIL 2747
            M++AL+QA+ GR+HIL
Sbjct: 659  MEKALIQAKAGRRHIL 674



 Score =  248 bits (633), Expect(2) = 0.0
 Identities = 142/260 (54%), Positives = 174/260 (66%), Gaps = 1/260 (0%)
 Frame = +2

Query: 2750 VKPEKVNVIIGSGGKKVKSIIEETGVEAIDTQDDGVVKITARDLASLEKSKAIIANLTMV 2929
            V P KV  +IGSGGKKVKSIIEE+GVE ID QDDG VKI A D+ASLE++KAII+ LTMV
Sbjct: 700  VHPSKVYFLIGSGGKKVKSIIEESGVEGIDMQDDGTVKIMANDVASLERAKAIISGLTMV 759

Query: 2930 PSVGDIYRNCEIKSIAPYGVFVEVAPGREGLCHISELSSDWLAKAEDAFKVGDRVDVKLI 3109
            PS+GDIYRNCEIKS+APYG FVE+APGREGLCHISELS++WLAK EDAFKVGDR+DVKLI
Sbjct: 760  PSIGDIYRNCEIKSMAPYGAFVEIAPGREGLCHISELSAEWLAKPEDAFKVGDRIDVKLI 819

Query: 3110 EINEKGQLRLSRRALLPDSSPEKTTVKQQ-TSSPTKESGSSQNAXXXXXXXXXXXXXXVE 3286
            E+NEKGQLRLS RALLP+S  +K + KQQ T   TK+ GS +                  
Sbjct: 820  EVNEKGQLRLSVRALLPESETDKESQKQQPTGDSTKDKGSPRKYV--------------- 864

Query: 3287 VVDEEQQSQDRGTLSKAGSPPKKVTSSEDSLLPQEKVIKRLVSSARDGAYVNKDRQKKSS 3466
                   S+DR +         KV S +D +L ++K ++R    + D         K   
Sbjct: 865  ----NTSSKDRAS---------KVASGDDLVL-KKKDVRRATGGSSD---------KTMK 901

Query: 3467 KVSSATGKDESNLVNGEAKI 3526
              +S+  ++ S+LVNGEA I
Sbjct: 902  SNNSSDEEERSSLVNGEATI 921


>dbj|BAJ93743.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 897

 Score =  878 bits (2268), Expect(2) = 0.0
 Identities = 445/590 (75%), Positives = 506/590 (85%), Gaps = 5/590 (0%)
 Frame = +3

Query: 993  YSIKIPVGDRHILVETGHIGRQASGAVTITDGETVVYTSVCLADVPSEPSDFFPLSVNYQ 1172
            +S+KIPVGDRHILVETGHIGRQASG+V +TDGET+VY SVC+AD PS+PSDFFP+SV+YQ
Sbjct: 89   FSVKIPVGDRHILVETGHIGRQASGSVMVTDGETIVYCSVCMADTPSDPSDFFPMSVHYQ 148

Query: 1173 ERFSAAGRTSGGFFKREGRAKDHEVLICRLIDRPLRPTMLKGFYHETQILSWVLSYDGLH 1352
            ER SAAGRTSGGFFKREGRAKDHEVL+CRLIDRPLRPTM KGFY+ETQILSWV SYDGLH
Sbjct: 149  ERLSAAGRTSGGFFKREGRAKDHEVLVCRLIDRPLRPTMPKGFYYETQILSWVFSYDGLH 208

Query: 1353 SPDSLAVTAAGIAVALSELPHTKAIAGVRIGLVGDKYIVNPTTKEMEESELDLLLAGTDS 1532
            SPD +AVTAAGIA+ALSE+P+ + IAGVRIG++ D+++VNPTT++ME+SELDL++AGTDS
Sbjct: 209  SPDCVAVTAAGIAMALSEVPNKQTIAGVRIGMINDQFVVNPTTEQMEDSELDLMMAGTDS 268

Query: 1533 AILMIEGYCNFLPEEKLLQAVEVGHDAVRAICNEMEGLVKKCGKPKMLEAIKLPPPELYR 1712
            AILMIEG+CNFL EEKLLQAVE G  A+R IC  ++ LV+ CGK KM+EAI LPP ELYR
Sbjct: 269  AILMIEGFCNFLTEEKLLQAVETGQAAIREICKAIDVLVQTCGKKKMVEAINLPPTELYR 328

Query: 1713 HVEEIAGNELVEVLQIRNKIPRRKALSALEENVLTILTEKGYIGKDETSA-----AEIVP 1877
            HVE+++G ELV+ LQI+ KI RRKALSALEE V+ IL+E+GY+ KDE S      A+IV 
Sbjct: 329  HVEDLSGEELVKALQIKEKILRRKALSALEEKVIMILSEQGYVSKDELSGTIENLADIVE 388

Query: 1878 ELYXXXXXXXXXXXXXXXXXXXXHIKPVSRKPIPLLFSEVDVKLVFKEVTSKFLRKRIVE 2057
            E                      HIKPVSRKP   LFSEVDVKLVFKEV+SK+LR+RIVE
Sbjct: 389  E-----EDEDEVIEDGEVDEGDVHIKPVSRKPRRQLFSEVDVKLVFKEVSSKYLRRRIVE 443

Query: 2058 GGKRSDGRTPSGVRLINSRCGLLPRAHGSALFTRGETQSLAVVTLGDKQMAQRIDNLVDV 2237
            G KRSDGR+   +R INS+CG+LPRAHGSALFTRGETQ+LAVVTLGD QMAQRID LVD 
Sbjct: 444  GEKRSDGRSACELRPINSQCGILPRAHGSALFTRGETQALAVVTLGDYQMAQRIDTLVDT 503

Query: 2238 DEVKRFYLQYSFPPSCVGEVGRMGAPSRREIGHGTLAERALEPILPSDDDFPYTIRVEST 2417
            +E K FYLQY+FPPS VGEVGR GAP+RREIGHG LAERALEPILP + DFPYTIRVEST
Sbjct: 504  EESKSFYLQYTFPPSSVGEVGRTGAPNRREIGHGMLAERALEPILPPEVDFPYTIRVEST 563

Query: 2418 ITESNGSSSMASVCGGSLALQDAGVPVKCSIAGIAMGLVLDTEEFGGDGMPLILSDITGS 2597
            ITESNGSSSMASVCGG LALQDAGVP+K  +AGIAMGLVLDT EFGGDG PLILSDITGS
Sbjct: 564  ITESNGSSSMASVCGGCLALQDAGVPIKFPVAGIAMGLVLDTHEFGGDGTPLILSDITGS 623

Query: 2598 EDASGDMDFKVAGNENGITAFQMDIKVGGITLPIMKQALLQAREGRKHIL 2747
            EDASGDMDFKVAGNE+GI+AFQMDIKV GITLP+M+QALLQAR+GR HIL
Sbjct: 624  EDASGDMDFKVAGNEHGISAFQMDIKVVGITLPVMEQALLQARDGRNHIL 673



 Score =  249 bits (635), Expect(2) = 0.0
 Identities = 121/156 (77%), Positives = 140/156 (89%)
 Frame = +2

Query: 2750 VKPEKVNVIIGSGGKKVKSIIEETGVEAIDTQDDGVVKITARDLASLEKSKAIIANLTMV 2929
            VKP KVN+IIGSGG+ +KSI+EETGV AID +DDG VKITARD+ SLEKSK II NLTMV
Sbjct: 699  VKPNKVNLIIGSGGRTIKSILEETGVYAIDARDDGTVKITARDMKSLEKSKNIITNLTMV 758

Query: 2930 PSVGDIYRNCEIKSIAPYGVFVEVAPGREGLCHISELSSDWLAKAEDAFKVGDRVDVKLI 3109
            P VG+I+RNCEIK++APYG FVE+APGREGLCHISELSS WLAKAEDA+KVGDR+DVKLI
Sbjct: 759  PKVGEIFRNCEIKTVAPYGAFVEIAPGREGLCHISELSSSWLAKAEDAYKVGDRIDVKLI 818

Query: 3110 EINEKGQLRLSRRALLPDSSPEKTTVKQQTSSPTKE 3217
            EIN+KGQLRLS +ALLPDS+ E +++KQQTSS  KE
Sbjct: 819  EINDKGQLRLSCKALLPDSNQEPSSIKQQTSSSVKE 854


>tpg|DAA59696.1| TPA: chloroplast RNA processing4 [Zea mays]
          Length = 880

 Score =  873 bits (2255), Expect(2) = 0.0
 Identities = 439/590 (74%), Positives = 510/590 (86%), Gaps = 5/590 (0%)
 Frame = +3

Query: 993  YSIKIPVGDRHILVETGHIGRQASGAVTITDGETVVYTSVCLADVPSEPSDFFPLSVNYQ 1172
            +S++IPVGDR ILVETGHIGRQAS +V +TDGET++Y SVCL+D P++PSDFFPLSV+YQ
Sbjct: 72   FSVRIPVGDREILVETGHIGRQASASVMVTDGETILYCSVCLSDTPNDPSDFFPLSVHYQ 131

Query: 1173 ERFSAAGRTSGGFFKREGRAKDHEVLICRLIDRPLRPTMLKGFYHETQILSWVLSYDGLH 1352
            ER SAAGRTSGGFFKREG+ KDHEVL+CRLIDRPLRPTM KGFY ETQILSWV SYDG+H
Sbjct: 132  ERLSAAGRTSGGFFKREGKTKDHEVLVCRLIDRPLRPTMPKGFYFETQILSWVFSYDGIH 191

Query: 1353 SPDSLAVTAAGIAVALSELPHTKAIAGVRIGLVGDKYIVNPTTKEMEESELDLLLAGTDS 1532
            SPD LA+TAAGIAVALSE+P+ + IAGVRIGL+ +++IVNPTT++ME SELDL++AGTDS
Sbjct: 192  SPDCLAITAAGIAVALSEIPNKQTIAGVRIGLINNQFIVNPTTEQMENSELDLMMAGTDS 251

Query: 1533 AILMIEGYCNFLPEEKLLQAVEVGHDAVRAICNEMEGLVKKCGKPKMLEAIKLPPPELYR 1712
            AILMIEGYC+FL EEKLL+AVE G  A+R IC  ++ LV+ CGK KM++AI LPPPELYR
Sbjct: 252  AILMIEGYCDFLTEEKLLEAVEAGQVAIREICKAIDVLVQSCGKKKMVDAISLPPPELYR 311

Query: 1713 HVEEIAGNELVEVLQIRNKIPRRKALSALEENVLTILTEKGYIGKD-----ETSAAEIVP 1877
            HVE+I+G+EL++ LQI+ KIPRRKALSALEE V++IL+E+GY+ KD       S A+IV 
Sbjct: 312  HVEDISGDELMKALQIKGKIPRRKALSALEEKVISILSEQGYVSKDGLSGGTESLADIVE 371

Query: 1878 ELYXXXXXXXXXXXXXXXXXXXXHIKPVSRKPIPLLFSEVDVKLVFKEVTSKFLRKRIVE 2057
            +                      HIKPVSRKP+  LF+EVDVKLVFKE++SK+LRKRIVE
Sbjct: 372  D-----EDEDEIVDDGEVDEGDVHIKPVSRKPLQ-LFAEVDVKLVFKEISSKYLRKRIVE 425

Query: 2058 GGKRSDGRTPSGVRLINSRCGLLPRAHGSALFTRGETQSLAVVTLGDKQMAQRIDNLVDV 2237
             GKRSDGR+P  +R INS+CGLLPRAHGSALFTRGETQSLAVVTLG  QMAQRIDNLVD 
Sbjct: 426  RGKRSDGRSPWELRPINSQCGLLPRAHGSALFTRGETQSLAVVTLGGYQMAQRIDNLVDT 485

Query: 2238 DEVKRFYLQYSFPPSCVGEVGRMGAPSRREIGHGTLAERALEPILPSDDDFPYTIRVEST 2417
            ++ K FYLQYSFPPSCVGEVGR+GAPSRREIGHG LAERALEPILP ++DFPYTIRVEST
Sbjct: 486  EDSKSFYLQYSFPPSCVGEVGRIGAPSRREIGHGMLAERALEPILPLEEDFPYTIRVEST 545

Query: 2418 ITESNGSSSMASVCGGSLALQDAGVPVKCSIAGIAMGLVLDTEEFGGDGMPLILSDITGS 2597
            ITESNGSSSMASVCGG LALQDAGVP+K  +AGIAMGLVLDT+EFGGDG PLILSDITG+
Sbjct: 546  ITESNGSSSMASVCGGCLALQDAGVPIKFPVAGIAMGLVLDTQEFGGDGSPLILSDITGA 605

Query: 2598 EDASGDMDFKVAGNENGITAFQMDIKVGGITLPIMKQALLQAREGRKHIL 2747
            EDASGDMD K+AGNE+GI+AFQMDIKV GITLP+M++ALLQAREGR+HIL
Sbjct: 606  EDASGDMDLKIAGNESGISAFQMDIKVVGITLPVMEKALLQAREGRQHIL 655



 Score =  244 bits (622), Expect(2) = 0.0
 Identities = 123/156 (78%), Positives = 133/156 (85%)
 Frame = +2

Query: 2750 VKPEKVNVIIGSGGKKVKSIIEETGVEAIDTQDDGVVKITARDLASLEKSKAIIANLTMV 2929
            VKP KVN+IIGSGGK +KSIIEETGV+AIDT DDG VKITARDL SLEKSK IIANLTMV
Sbjct: 681  VKPNKVNLIIGSGGKTIKSIIEETGVDAIDTGDDGTVKITARDLTSLEKSKIIIANLTMV 740

Query: 2930 PSVGDIYRNCEIKSIAPYGVFVEVAPGREGLCHISELSSDWLAKAEDAFKVGDRVDVKLI 3109
            P VG+IYR+CEIKSIAPYG FVE+APGREGLCHISELSS WLAKAEDAFKVGDR+DVKLI
Sbjct: 741  PKVGEIYRDCEIKSIAPYGAFVEIAPGREGLCHISELSSGWLAKAEDAFKVGDRIDVKLI 800

Query: 3110 EINEKGQLRLSRRALLPDSSPEKTTVKQQTSSPTKE 3217
            EIN+KGQLRLS RALLPD   E      +   P K+
Sbjct: 801  EINDKGQLRLSSRALLPDVDSESNIGSTKEKVPQKD 836


>ref|XP_007029978.1| Polyribonucleotide nucleotidyltransferase isoform 4 [Theobroma cacao]
            gi|508718583|gb|EOY10480.1| Polyribonucleotide
            nucleotidyltransferase isoform 4 [Theobroma cacao]
          Length = 912

 Score =  849 bits (2193), Expect(2) = 0.0
 Identities = 436/595 (73%), Positives = 489/595 (82%), Gaps = 1/595 (0%)
 Frame = +3

Query: 969  GTQFVQQPYSIKIPVGDRHILVETGHIGRQASGAVTITDGETVVYTSVCLADVPSEPSDF 1148
            G   + QP S+KIP GDR ILVETGHIGRQASG+V  TDGET V+               
Sbjct: 89   GGSGILQPVSVKIPFGDREILVETGHIGRQASGSVMATDGETNVFRQQV----------- 137

Query: 1149 FPLSVNYQERFSAAGRTSGGFFKREGRAKDHEVLICRLIDRPLRPTMLKGFYHETQILSW 1328
                                     GR KDHEVLICRLIDRPLRPTM KGFYHETQ+LSW
Sbjct: 138  -----------------------ERGRTKDHEVLICRLIDRPLRPTMPKGFYHETQLLSW 174

Query: 1329 VLSYDGLHSPDSLAVTAAGIAVALSELPHTKAIAGVRIGLVGDKYIVNPTTKEMEESELD 1508
            VLSYDGLHSPD+LAVTAAG+AVALSE+P++KAIAGVR+GL+GD+++VNPTTKEME+S LD
Sbjct: 175  VLSYDGLHSPDALAVTAAGLAVALSEVPNSKAIAGVRVGLLGDRFVVNPTTKEMEDSTLD 234

Query: 1509 LLLAGTDSAILMIEGYCNFLPEEKLLQAVEVGHDAVRAICNEMEGLVKKCGKPKMLEAIK 1688
            L LAGTDSAILM+EGYC+FLPEEKLL+AV+VG DAVRAIC  ++ LVKKCGKPKML+AIK
Sbjct: 235  LFLAGTDSAILMVEGYCDFLPEEKLLEAVQVGQDAVRAICTAVDALVKKCGKPKMLDAIK 294

Query: 1689 LPPPELYRHVEEIAGNELVEVLQIRNKIPRRKALSALEENVLTILTEKGYIG-KDETSAA 1865
            LPPP LYR VE+IAG+EL +VLQIR+KIPRRKA+S LEENV+ ILTEKGYI  +D +  A
Sbjct: 295  LPPPGLYRRVEKIAGDELHKVLQIRSKIPRRKAISLLEENVINILTEKGYISTEDNSGTA 354

Query: 1866 EIVPELYXXXXXXXXXXXXXXXXXXXXHIKPVSRKPIPLLFSEVDVKLVFKEVTSKFLRK 2045
            E + +                      HIKPVSRK  PL F+EVDVKLVFKEVTSKFLR+
Sbjct: 355  ETIQDWLEEEDEDEEIVVDGEVDEGDVHIKPVSRKSTPL-FTEVDVKLVFKEVTSKFLRR 413

Query: 2046 RIVEGGKRSDGRTPSGVRLINSRCGLLPRAHGSALFTRGETQSLAVVTLGDKQMAQRIDN 2225
            RIVEGGKRSDGR+P G+R I SRCGLLPRAHGSALFTRGETQSL VVTLGD+QMAQ++DN
Sbjct: 414  RIVEGGKRSDGRSPEGIRSITSRCGLLPRAHGSALFTRGETQSLVVVTLGDRQMAQKVDN 473

Query: 2226 LVDVDEVKRFYLQYSFPPSCVGEVGRMGAPSRREIGHGTLAERALEPILPSDDDFPYTIR 2405
            L +V+E KRFYLQYSFPPSCVGEVGRMGAPSRREIGHGTLAERALEPILPS+D+FPYTIR
Sbjct: 474  LANVEEFKRFYLQYSFPPSCVGEVGRMGAPSRREIGHGTLAERALEPILPSEDEFPYTIR 533

Query: 2406 VESTITESNGSSSMASVCGGSLALQDAGVPVKCSIAGIAMGLVLDTEEFGGDGMPLILSD 2585
            VESTITESNGSSSMASVCGG LALQDAGVP+KCSIAGIAMG+VLDT+EFGGDG PLILSD
Sbjct: 534  VESTITESNGSSSMASVCGGCLALQDAGVPLKCSIAGIAMGMVLDTKEFGGDGAPLILSD 593

Query: 2586 ITGSEDASGDMDFKVAGNENGITAFQMDIKVGGITLPIMKQALLQAREGRKHILG 2750
            ITGSEDASGDMD KVAG E+GITAFQMDIKVGGITLP+MK+ALLQAR+GR+ +LG
Sbjct: 594  ITGSEDASGDMDLKVAGTEDGITAFQMDIKVGGITLPVMKEALLQARDGRRRVLG 648



 Score =  273 bits (697), Expect(2) = 0.0
 Identities = 150/252 (59%), Positives = 186/252 (73%), Gaps = 4/252 (1%)
 Frame = +2

Query: 2750 VKPEKVNVIIGSGGKKVKSIIEETGVEAIDTQDDGVVKITARDLASLEKSKAIIANLTMV 2929
            V P+KVN+IIGSGGKKVKSIIEETGVEAIDTQDDG+VKITA+DL+SLEKSK+II+NLTMV
Sbjct: 673  VAPDKVNIIIGSGGKKVKSIIEETGVEAIDTQDDGIVKITAKDLSSLEKSKSIISNLTMV 732

Query: 2930 PSVGDIYRNCEIKSIAPYGVFVEVAPGREGLCHISELSSDWLAKAEDAFKVGDRVDVKLI 3109
            P+VGDIYRNCEIKSIAPYGVFVE+APGREGLCHISEL+SDWLAKAEDAFKVGDRVDVKLI
Sbjct: 733  PTVGDIYRNCEIKSIAPYGVFVEIAPGREGLCHISELTSDWLAKAEDAFKVGDRVDVKLI 792

Query: 3110 EINEKGQLRLSRRALL--PDSSPEKTTVKQQTSSPTKESGSSQNAXXXXXXXXXXXXXXV 3283
            E+N+KGQLRLSRRALL  P+++ E  + +Q T    K    S  A               
Sbjct: 793  EVNDKGQLRLSRRALLPVPETNSEDPSSEQLTGHQAKVITDSGKASDKSTPKKYVNVPKS 852

Query: 3284 EVVDEE--QQSQDRGTLSKAGSPPKKVTSSEDSLLPQEKVIKRLVSSARDGAYVNKDRQK 3457
            + + +E  +Q +D+ + +K  S  K  +S+E++LLP++KV KR+             ++ 
Sbjct: 853  DALAQEKLEQPKDKSSGTKISSSSKS-SSAENTLLPRKKVFKRI-------------KKS 898

Query: 3458 KSSKVSSATGKD 3493
             S  V+  +GKD
Sbjct: 899  TSKAVTGVSGKD 910


>prf||2208281A 100RNP protein
          Length = 779

 Score =  946 bits (2446), Expect(2) = 0.0
 Identities = 491/662 (74%), Positives = 543/662 (82%), Gaps = 3/662 (0%)
 Frame = +3

Query: 771  PHSSPFLHSLRSKN--LLVSYTPSLHLQRKKPLFXXXXXXXXXXXXXKIRIRALTEXXXX 944
            PHSS  L S  SKN  +L+S +     +  K L              K  +RA+ +    
Sbjct: 7    PHSST-LPSSHSKNCKILLSASALSRYRTFKTLASLHRLLPTNSHGKKFNVRAMAQTHVS 65

Query: 945  XXXXXXXYGTQFVQQPYSIKIPVGDRHILVETGHIGRQASGAVTITDGETVVYTSVCLAD 1124
                          QPYS+KIP GDRHILVETGHIGRQASGAVT+TDGET+VYT+VC++D
Sbjct: 66   QKHAHDSL------QPYSVKIPFGDRHILVETGHIGRQASGAVTVTDGETIVYTTVCMSD 119

Query: 1125 VPSEPSDFFPLSVNYQERFSAAGRTSGGFFKREGRAKDHEVLICRLIDRPLRPTMLKGFY 1304
            +PSEPSDFFPLSVNYQERFSAAGRTSGGFFKREGR KD+EVL+CRLIDRPLR TMLKGFY
Sbjct: 120  IPSEPSDFFPLSVNYQERFSAAGRTSGGFFKREGRPKDNEVLVCRLIDRPLRTTMLKGFY 179

Query: 1305 HETQILSWVLSYDGLHSPDSLAVTAAGIAVALSELPHTKAIAGVRIGLVGDKYIVNPTTK 1484
            HETQILSWVLSYDGLH PD+LAVTAAGIAVALSEL HTK +AGVR+GLVG KYIVNPTT 
Sbjct: 180  HETQILSWVLSYDGLHPPDALAVTAAGIAVALSELFHTKPVAGVRVGLVGGKYIVNPTTN 239

Query: 1485 EMEESELDLLLAGTDSAILMIEGYCNFLPEEKLLQAVEVGHDAVRAICNEMEGLVKKCGK 1664
            EME SELDL++AGTDSAILMIEGYCNFLPEEKLL+AVEVG DAVRAIC E+E LV+KCGK
Sbjct: 240  EMENSELDLVVAGTDSAILMIEGYCNFLPEEKLLEAVEVGQDAVRAICKEVEALVEKCGK 299

Query: 1665 PKMLEAIKLPPPELYRHVEEIAGNELVEVLQIRNKIPRRKALSALEENVLTILTEKGYIG 1844
            PKM++AIKLPPPELY+HVEEIAG+ELV  LQI+ K+PRRKAL +LEE V+ ILT++GY+G
Sbjct: 300  PKMIDAIKLPPPELYKHVEEIAGDELVHALQIKKKLPRRKALVSLEEKVVDILTQRGYVG 359

Query: 1845 KD-ETSAAEIVPELYXXXXXXXXXXXXXXXXXXXXHIKPVSRKPIPLLFSEVDVKLVFKE 2021
            K   T   E +P+LY                    HIKP  +   PLLFSEVDVKLVFKE
Sbjct: 360  KSVATVIPETLPDLYVDEEEDEEVVVDGEVDEGDVHIKPSPKNCTPLLFSEVDVKLVFKE 419

Query: 2022 VTSKFLRKRIVEGGKRSDGRTPSGVRLINSRCGLLPRAHGSALFTRGETQSLAVVTLGDK 2201
             TSK+LRKRIVEGG+RSDGRT  GVR INSRCGLLPRAHGSALFTRGETQ+LAVVTLGDK
Sbjct: 420  TTSKYLRKRIVEGGRRSDGRTSEGVRPINSRCGLLPRAHGSALFTRGETQALAVVTLGDK 479

Query: 2202 QMAQRIDNLVDVDEVKRFYLQYSFPPSCVGEVGRMGAPSRREIGHGTLAERALEPILPSD 2381
            QMAQRID L   DE KRFYLQYSFPPSCVGE GR+GAPSRREIGHGTLAERALEPILPS+
Sbjct: 480  QMAQRIDTLEGDDESKRFYLQYSFPPSCVGEAGRVGAPSRREIGHGTLAERALEPILPSE 539

Query: 2382 DDFPYTIRVESTITESNGSSSMASVCGGSLALQDAGVPVKCSIAGIAMGLVLDTEEFGGD 2561
            D+FPYT+RVES ITESNGSSSMASVCGGSLAL DAGVPVKC IAGIAMG+VLDT+EFGGD
Sbjct: 540  DEFPYTVRVESNITESNGSSSMASVCGGSLALLDAGVPVKCPIAGIAMGMVLDTKEFGGD 599

Query: 2562 GMPLILSDITGSEDASGDMDFKVAGNENGITAFQMDIKVGGITLPIMKQALLQAREGRKH 2741
            G PLILSDITGSEDASGDMDFKVAGN + +TAFQMDIKVGGITL +MKQALLQA++GRK 
Sbjct: 600  GTPLILSDITGSEDASGDMDFKVAGNADCVTAFQMDIKVGGITLSVMKQALLQAKDGRKI 659

Query: 2742 IL 2747
            IL
Sbjct: 660  IL 661



 Score =  159 bits (403), Expect(2) = 0.0
 Identities = 78/90 (86%), Positives = 85/90 (94%)
 Frame = +2

Query: 2750 VKPEKVNVIIGSGGKKVKSIIEETGVEAIDTQDDGVVKITARDLASLEKSKAIIANLTMV 2929
            V+PEKVN+IIGSGGK V+SIIE TGVEAIDTQDDG VKITARDL SLEKSKA+IANLTMV
Sbjct: 687  VRPEKVNLIIGSGGKTVRSIIEATGVEAIDTQDDGTVKITARDLESLEKSKAMIANLTMV 746

Query: 2930 PSVGDIYRNCEIKSIAPYGVFVEVAPGREG 3019
            P++GDIYRNCEIKSIAPYG FVE+APGREG
Sbjct: 747  PTIGDIYRNCEIKSIAPYGAFVEIAPGREG 776