BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00067132
         (255 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD32759.1| putative retroelement pol polyprotein [Arabidopsi...    98   1e-18
emb|CAB75481.1| copia-like polyprotein [Arabidopsis thaliana]          97   2e-18
gb|AAK70406.1|AF369930_1 pol polyprotein [Citrus x paradisi]           97   3e-18
gb|ABG22123.1| polyprotein [Prunus avium]                              95   9e-18
dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsi...    94   3e-17
gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]      93   4e-17
gb|AAD23690.1| putative retroelement pol polyprotein [Arabidopsi...    92   6e-17
pir||S23312 retrovirus-related polyprotein KAS-1 - Arabidopsis t...    91   2e-16
ref|XP_003606104.1| Aspartyl-tRNA synthetase [Medicago truncatul...    91   2e-16
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...    90   4e-16
ref|XP_002320045.2| hypothetical protein POPTR_0014s01150g [Popu...    89   5e-16
pir||S23320 hypothetical protein 3 - Arabidopsis thaliana retrot...    89   5e-16
gb|ABG37666.1| CCHC-type integrase [Populus trichocarpa]               89   5e-16
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]    89   6e-16
emb|CAB40039.1| putative retrotransposon [Arabidopsis thaliana] ...    89   8e-16
gb|AAD39270.1|AC007203_2 Similar to reverse trancriptase [Arabid...    88   1e-15
gb|AAC62132.1| copia-like retroelement pol polyprotein [Arabidop...    88   1e-15
gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsi...    87   2e-15
emb|CAN77253.1| hypothetical protein VITISV_020397 [Vitis vinifera]    87   3e-15
gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Ar...    86   4e-15

>gb|AAD32759.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1356

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 45/72 (62%), Positives = 59/72 (81%)
 Frame = -1

Query: 216  STTDAEYMVVTEAVKEAICLRGLVHDLGVTQRDITVLCNS*SAIHLAKNHVHHARTKHID 37
            STT++EYM +TEAVKEAI L+GL+ D G  Q+ + + C+S SAI L+KN+VHH RTKHID
Sbjct: 1246 STTESEYMSLTEAVKEAIWLKGLLKDFGYEQKSVEIFCDSQSAIALSKNNVHHERTKHID 1305

Query: 36   VRFHFIRDIIKD 1
            V++HFIR+II D
Sbjct: 1306 VKYHFIREIISD 1317


>emb|CAB75481.1| copia-like polyprotein [Arabidopsis thaliana]
          Length = 1363

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 45/72 (62%), Positives = 59/72 (81%)
 Frame = -1

Query: 216  STTDAEYMVVTEAVKEAICLRGLVHDLGVTQRDITVLCNS*SAIHLAKNHVHHARTKHID 37
            S+T+ EYM +TEAVKEAI L+GL+ D G  Q+++ + C+S SAI L+KN+VHH RTKHID
Sbjct: 1253 SSTECEYMSLTEAVKEAIWLKGLLKDFGYEQKNVEIFCDSQSAIALSKNNVHHERTKHID 1312

Query: 36   VRFHFIRDIIKD 1
            V+FHFIR+II D
Sbjct: 1313 VKFHFIREIIAD 1324


>gb|AAK70406.1|AF369930_1 pol polyprotein [Citrus x paradisi]
          Length = 297

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 50/91 (54%), Positives = 65/91 (71%), Gaps = 9/91 (9%)
 Frame = -1

Query: 249 FLLAGGPIS*GS---------TTDAEYMVVTEAVKEAICLRGLVHDLGVTQRDITVLCNS 97
           F L GG +S  S         TT+AEY+  TEAVKEAI L+GL+ DLGV Q +I V C++
Sbjct: 166 FTLGGGSVSWRSILQSTIALSTTEAEYIAATEAVKEAIWLKGLLGDLGVIQENIAVFCDN 225

Query: 96  *SAIHLAKNHVHHARTKHIDVRFHFIRDIIK 4
            SAI LAKN  +HARTKHIDV++H++R+II+
Sbjct: 226 QSAIFLAKNQTYHARTKHIDVKYHYVREIIE 256


>gb|ABG22123.1| polyprotein [Prunus avium]
          Length = 276

 Score = 95.1 bits (235), Expect = 9e-18
 Identities = 51/82 (62%), Positives = 60/82 (73%), Gaps = 9/82 (10%)
 Frame = -1

Query: 249 FLLAGGPIS*GS---------TTDAEYMVVTEAVKEAICLRGLVHDLGVTQRDITVLCNS 97
           F +AGGP+S  S         TT+AEYM VTEA+KEAI L+GL+ DLGV Q  + V C+S
Sbjct: 195 FTIAGGPVSWRSILQSTVALSTTEAEYMAVTEAIKEAIWLQGLLDDLGVQQDHVDVYCDS 254

Query: 96  *SAIHLAKNHVHHARTKHIDVR 31
            SAI+LAKN VHHARTKHIDVR
Sbjct: 255 QSAIYLAKNQVHHARTKHIDVR 276


>dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsis thaliana]
          Length = 1342

 Score = 93.6 bits (231), Expect = 3e-17
 Identities = 46/72 (63%), Positives = 56/72 (77%)
 Frame = -1

Query: 216  STTDAEYMVVTEAVKEAICLRGLVHDLGVTQRDITVLCNS*SAIHLAKNHVHHARTKHID 37
            STT+AEYM + EAVKEAI LRGL  ++G  Q  + V+C+S SAI L+KN VHH RTKHID
Sbjct: 1232 STTEAEYMALAEAVKEAIWLRGLAAEMGFEQDAVEVMCDSQSAIALSKNSVHHERTKHID 1291

Query: 36   VRFHFIRDIIKD 1
            VR+HFIR+ I D
Sbjct: 1292 VRYHFIREKIAD 1303


>gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]
          Length = 1297

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 51/91 (56%), Positives = 59/91 (64%), Gaps = 9/91 (9%)
 Frame = -1

Query: 249  FLLAGGPIS*G---------STTDAEYMVVTEAVKEAICLRGLVHDLGVTQRDITVLCNS 97
            F   GGP+S           STT+AEYM +TEA KEAI L GL   LGV Q  + V C+S
Sbjct: 1172 FTCGGGPVSWKATLQAVTALSTTEAEYMALTEASKEAIWLNGLAGQLGVHQEGVVVKCDS 1231

Query: 96   *SAIHLAKNHVHHARTKHIDVRFHFIRDIIK 4
             SAIHLAKN V HARTKHID R+H IRD ++
Sbjct: 1232 QSAIHLAKNQVFHARTKHIDARYHRIRDWVE 1262


>gb|AAD23690.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1333

 Score = 92.4 bits (228), Expect = 6e-17
 Identities = 42/70 (60%), Positives = 57/70 (81%)
 Frame = -1

Query: 216  STTDAEYMVVTEAVKEAICLRGLVHDLGVTQRDITVLCNS*SAIHLAKNHVHHARTKHID 37
            STT+AEYM +TEAVKEA+ ++GL+ + G  Q+ + + C+S SAI L+KN+VHH RTKHID
Sbjct: 1223 STTEAEYMSLTEAVKEAVWMKGLLKEFGYEQKSVEIFCDSQSAIALSKNNVHHERTKHID 1282

Query: 36   VRFHFIRDII 7
            VR+ +IRDII
Sbjct: 1283 VRYQYIRDII 1292


>pir||S23312 retrovirus-related polyprotein KAS-1 - Arabidopsis thaliana
           retrotransposon Ta1 (fragment) gi|16356|emb|CAA37917.1|
           reverse transcriptase [Arabidopsis thaliana]
          Length = 587

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 41/71 (57%), Positives = 58/71 (81%)
 Frame = -1

Query: 216 STTDAEYMVVTEAVKEAICLRGLVHDLGVTQRDITVLCNS*SAIHLAKNHVHHARTKHID 37
           STT+AE+M +TEA KEA+ ++GL+ DLG+ Q  +T+ C+S SAI L+KN  HH RTKHID
Sbjct: 476 STTEAEFMALTEAAKEALWIKGLMKDLGLEQDKVTLWCDSQSAICLSKNSTHHERTKHID 535

Query: 36  VRFHFIRDIIK 4
           VR++FIRD+++
Sbjct: 536 VRYNFIRDVVE 546


>ref|XP_003606104.1| Aspartyl-tRNA synthetase [Medicago truncatula]
           gi|355507159|gb|AES88301.1| Aspartyl-tRNA synthetase
           [Medicago truncatula]
          Length = 803

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 40/71 (56%), Positives = 56/71 (78%)
 Frame = -1

Query: 216 STTDAEYMVVTEAVKEAICLRGLVHDLGVTQRDITVLCNS*SAIHLAKNHVHHARTKHID 37
           STT AEY+ + E VKEAI L+G++ +LG+TQ  + + C+S SAIHLA + V+H RTKHID
Sbjct: 49  STTQAEYIALVEGVKEAIWLKGMIGELGITQECVKIHCDSQSAIHLANHQVYHERTKHID 108

Query: 36  VRFHFIRDIIK 4
           +R HF+RD+I+
Sbjct: 109 IRLHFVRDMIE 119


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
            copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 44/67 (65%), Positives = 52/67 (77%)
 Frame = -1

Query: 216  STTDAEYMVVTEAVKEAICLRGLVHDLGVTQRDITVLCNS*SAIHLAKNHVHHARTKHID 37
            STT+AEYM +TEA KE I L+GLV DLG+     TV C+S SAI LAK+ VHH RTKHID
Sbjct: 1200 STTEAEYMALTEAAKEGIWLKGLVSDLGLHHDQATVYCDSLSAICLAKDQVHHERTKHID 1259

Query: 36   VRFHFIR 16
            VR+HF+R
Sbjct: 1260 VRYHFLR 1266


>ref|XP_002320045.2| hypothetical protein POPTR_0014s01150g [Populus trichocarpa]
           gi|550323083|gb|EEE98360.2| hypothetical protein
           POPTR_0014s01150g [Populus trichocarpa]
          Length = 905

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 42/65 (64%), Positives = 51/65 (78%)
 Frame = -1

Query: 195 MVVTEAVKEAICLRGLVHDLGVTQRDITVLCNS*SAIHLAKNHVHHARTKHIDVRFHFIR 16
           M VTEA KEAI L GL+ DLG+ Q  + V C+S SAI LAKN VHH+RTKHIDVRFHF+R
Sbjct: 1   MAVTEAFKEAIWLHGLIEDLGIVQEHVDVHCDSQSAICLAKNQVHHSRTKHIDVRFHFVR 60

Query: 15  DIIKD 1
           +I+ +
Sbjct: 61  EIVDE 65


>pir||S23320 hypothetical protein 3 - Arabidopsis thaliana retrotransposon Ta1-2
           (strain Landsberg) (fragment) gi|1345515|emb|CAA37925.1|
           unnamed protein product [Arabidopsis thaliana]
          Length = 154

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 40/71 (56%), Positives = 57/71 (80%)
 Frame = -1

Query: 216 STTDAEYMVVTEAVKEAICLRGLVHDLGVTQRDITVLCNS*SAIHLAKNHVHHARTKHID 37
           STT+AE+M +TE  KEA+ ++GL+ DLG+ Q  +T+ C+S SAI L+KN  HH RTKHID
Sbjct: 66  STTEAEFMALTEVAKEALWIKGLMKDLGLEQDKVTLWCDSQSAICLSKNSTHHERTKHID 125

Query: 36  VRFHFIRDIIK 4
           VR++FIRD+++
Sbjct: 126 VRYNFIRDVVE 136


>gb|ABG37666.1| CCHC-type integrase [Populus trichocarpa]
          Length = 353

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 42/65 (64%), Positives = 51/65 (78%)
 Frame = -1

Query: 195 MVVTEAVKEAICLRGLVHDLGVTQRDITVLCNS*SAIHLAKNHVHHARTKHIDVRFHFIR 16
           M VTEA KEAI L GL+ DLG+ Q  + V C+S SAI LAKN VHH+RTKHIDVRFHF+R
Sbjct: 1   MAVTEAFKEAIWLHGLIEDLGIVQEHVDVHCDSQSAICLAKNQVHHSRTKHIDVRFHFVR 60

Query: 15  DIIKD 1
           +I+ +
Sbjct: 61  EIVDE 65


>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
          Length = 1208

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 42/70 (60%), Positives = 54/70 (77%)
 Frame = -1

Query: 216  STTDAEYMVVTEAVKEAICLRGLVHDLGVTQRDITVLCNS*SAIHLAKNHVHHARTKHID 37
            STT+AEYM +TEAVKEAI L+G+  +L + +  + V C++ SAIHLAKN   H R+KHID
Sbjct: 1098 STTEAEYMAMTEAVKEAIWLKGITEELAMYRGKVVVYCDNQSAIHLAKNQSFHERSKHID 1157

Query: 36   VRFHFIRDII 7
            VR HF+RDII
Sbjct: 1158 VRLHFVRDII 1167


>emb|CAB40039.1| putative retrotransposon [Arabidopsis thaliana]
            gi|7267743|emb|CAB78169.1| putative retrotransposon
            [Arabidopsis thaliana]
          Length = 1230

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 41/72 (56%), Positives = 56/72 (77%)
 Frame = -1

Query: 216  STTDAEYMVVTEAVKEAICLRGLVHDLGVTQRDITVLCNS*SAIHLAKNHVHHARTKHID 37
            S+T A YM +TEAVKEAI L+GL+ D G  Q+ + + C+S SAI L+KN+VHH RTKHID
Sbjct: 1120 SSTKAGYMSLTEAVKEAIWLKGLLQDFGYEQKTVEIFCDSQSAIALSKNNVHHDRTKHID 1179

Query: 36   VRFHFIRDIIKD 1
            +++H IR++I D
Sbjct: 1180 IKYHKIREVIAD 1191


>gb|AAD39270.1|AC007203_2 Similar to reverse trancriptase [Arabidopsis thaliana]
          Length = 953

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 40/71 (56%), Positives = 55/71 (77%)
 Frame = -1

Query: 216 STTDAEYMVVTEAVKEAICLRGLVHDLGVTQRDITVLCNS*SAIHLAKNHVHHARTKHID 37
           S+T AEYM +T+A  E + L+GLV++LG TQR + + C+S S I LAKN V+H RTKHID
Sbjct: 786 SSTKAEYMALTDATNETVWLKGLVNELGFTQRSVNIHCDSQSVIALAKNAVYHERTKHID 845

Query: 36  VRFHFIRDIIK 4
           V++HFIR++ K
Sbjct: 846 VKYHFIRELAK 856


>gb|AAC62132.1| copia-like retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1137

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 40/72 (55%), Positives = 56/72 (77%)
 Frame = -1

Query: 216  STTDAEYMVVTEAVKEAICLRGLVHDLGVTQRDITVLCNS*SAIHLAKNHVHHARTKHID 37
            S+T+AEYM +T+  KEAI L+G V +LG  Q+ + + C+S SAI LAKN V+H RTKHID
Sbjct: 1027 SSTEAEYMALTDGAKEAIWLKGHVSELGFVQKTVNIHCDSQSAIALAKNAVYHERTKHID 1086

Query: 36   VRFHFIRDIIKD 1
            V++HFIRD++ +
Sbjct: 1087 VKYHFIRDLVNN 1098


>gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1335

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 44/70 (62%), Positives = 54/70 (77%)
 Frame = -1

Query: 216  STTDAEYMVVTEAVKEAICLRGLVHDLGVTQRDITVLCNS*SAIHLAKNHVHHARTKHID 37
            S+T+AEYM +TEAVKEA+ L+G   +LG +Q  + V  +S SAI LAKN VHH RTKHID
Sbjct: 1225 SSTEAEYMALTEAVKEALWLKGFAAELGHSQDYVEVHSDSQSAITLAKNSVHHERTKHID 1284

Query: 36   VRFHFIRDII 7
            +R HFIRDII
Sbjct: 1285 IRLHFIRDII 1294


>emb|CAN77253.1| hypothetical protein VITISV_020397 [Vitis vinifera]
          Length = 215

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 40/70 (57%), Positives = 55/70 (78%)
 Frame = -1

Query: 216 STTDAEYMVVTEAVKEAICLRGLVHDLGVTQRDITVLCNS*SAIHLAKNHVHHARTKHID 37
           STT+ EYM + EA KE++ L GLV +LG+ Q  + + C+S SAI+LAKN V+HARTKHID
Sbjct: 105 STTELEYMAIAEAGKESLWLTGLVKELGIQQGGVQLYCDSQSAIYLAKNQVYHARTKHID 164

Query: 36  VRFHFIRDII 7
           VRFH I++++
Sbjct: 165 VRFHKIKELV 174


>gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Arabidopsis thaliana]
          Length = 1356

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 39/76 (51%), Positives = 59/76 (77%)
 Frame = -1

Query: 231  PIS*GSTTDAEYMVVTEAVKEAICLRGLVHDLGVTQRDITVLCNS*SAIHLAKNHVHHAR 52
            P+   STT+AEY+ + EA KEA+ ++GL+ D+G+ Q  + + C+S SAI L+KN V+H R
Sbjct: 1240 PVVAMSTTEAEYIALAEAAKEAMWIKGLLQDMGMQQDKVKIWCDSQSAICLSKNSVYHER 1299

Query: 51   TKHIDVRFHFIRDIIK 4
            TKHIDVRF++IRD+++
Sbjct: 1300 TKHIDVRFNYIRDVVE 1315