BLASTX nr result

ID: Akebia25_contig00066462 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00066462
         (241 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006857604.1| hypothetical protein AMTR_s00061p00104430 [A...    66   4e-09
ref|XP_002524561.1| conserved hypothetical protein [Ricinus comm...    56   5e-06

>ref|XP_006857604.1| hypothetical protein AMTR_s00061p00104430 [Amborella trichopoda]
           gi|548861700|gb|ERN19071.1| hypothetical protein
           AMTR_s00061p00104430 [Amborella trichopoda]
          Length = 1194

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 39/91 (42%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
 Frame = +3

Query: 6   LSDLGTPSAPPIVEIGREETKFGDVEIEQTS--------------NEMHSSSETRTGIGS 143
           LS+ G PSAPP+V+       F   E+E T+              NE+H+  ET     S
Sbjct: 206 LSEAGNPSAPPMVDSRTGSQSF---EMEATTLPGARVISETKNVYNELHAQDETNLSCDS 262

Query: 144 KEVLTDWGAQSHKSNEPCVRTISDETEPQIP 236
           KE LTD GAQSH +NEPC R I  E E Q+P
Sbjct: 263 KECLTDLGAQSHAANEPCPRYIPGEVETQMP 293


>ref|XP_002524561.1| conserved hypothetical protein [Ricinus communis]
           gi|223536114|gb|EEF37769.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1091

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 36/83 (43%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
 Frame = +3

Query: 3   KLSDLGTPSAPPIVEIGREETKF-GDVEIEQTSNEMHSSSETRTGIGSKEVLTDWGAQSH 179
           ++ DLGTPSAPPI E   EE KF  + EIEQ    + +S ET    GSKE L D  +QS 
Sbjct: 113 EIRDLGTPSAPPIAETRGEEKKFLVEHEIEQIGTGVSNSGETEIFDGSKEGLLDRTSQSM 172

Query: 180 KSNEPCVR---TISDETEPQIPY 239
            +NE   R    +++E + ++PY
Sbjct: 173 PTNEFVERLNNNMAEEADEKMPY 195


Top