BLASTX nr result
ID: Akebia25_contig00066349
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia25_contig00066349
(298 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAQ56407.1| putative gag-pol polyprotein [Oryza sativa Japoni... 75 1e-17
ref|XP_004292437.1| PREDICTED: uncharacterized protein LOC101306... 79 1e-17
emb|CAE01890.2| OSJNBa0035O13.13 [Oryza sativa Japonica Group] 75 4e-17
emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera] 79 6e-17
emb|CAN64427.1| hypothetical protein VITISV_029384 [Vitis vinifera] 79 6e-17
ref|XP_004980495.1| PREDICTED: uncharacterized protein LOC101772... 75 6e-17
gb|AAX96717.1| retrotransposon protein, putative, Ty3-gypsy sub-... 74 1e-16
gb|AAX95495.1| Retrotransposon gag protein, putative [Oryza sati... 74 1e-16
emb|CAN80487.1| hypothetical protein VITISV_043198 [Vitis vinifera] 79 1e-16
ref|XP_007010495.1| Uncharacterized protein TCM_044370 [Theobrom... 76 1e-16
emb|CAD39843.2| OSJNBb0072N21.12 [Oryza sativa Japonica Group] 75 1e-16
ref|XP_004309164.1| PREDICTED: uncharacterized protein LOC101300... 76 1e-16
emb|CAN69233.1| hypothetical protein VITISV_003380 [Vitis vinifera] 77 2e-16
gb|ABF97027.1| retrotransposon protein, putative, Ty3-gypsy subc... 75 2e-16
gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japoni... 75 2e-16
dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group] 75 2e-16
ref|XP_004954917.1| PREDICTED: uncharacterized protein LOC101752... 75 2e-16
gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sa... 74 3e-16
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja... 74 4e-16
emb|CAD39981.1| OSJNBa0032B23.3 [Oryza sativa Japonica Group] 74 4e-16
>gb|AAQ56407.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1619
Score = 74.7 bits (182), Expect(2) = 1e-17
Identities = 39/63 (61%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Frame = -2
Query: 291 ELHGQVSKLLQKGLVRESMSPSVVPVLLTPKND*SWRVCID-RAIN*IAIEYLFPIPCLK 115
E+ QV +LL KG VRES+SP VPVLL PK D SWR+C+D RAIN I I Y PIP L
Sbjct: 657 EIQRQVQELLDKGYVRESLSPCSVPVLLVPKKDGSWRMCVDCRAINNITIRYRHPIPRLD 716
Query: 114 DLL 106
D+L
Sbjct: 717 DML 719
Score = 40.8 bits (94), Expect(2) = 1e-17
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = -3
Query: 83 FLQIDMCIEYHQSQVSLGDEWKMTFKT 3
F +ID+C YHQ ++ LGDEWK FKT
Sbjct: 728 FSKIDLCSGYHQIRMKLGDEWKTAFKT 754
>ref|XP_004292437.1| PREDICTED: uncharacterized protein LOC101306407 [Fragaria vesca
subsp. vesca]
Length = 1300
Score = 79.0 bits (193), Expect(2) = 1e-17
Identities = 39/65 (60%), Positives = 52/65 (80%), Gaps = 1/65 (1%)
Frame = -2
Query: 297 YVELHGQVSKLLQKGLVRESMSPSVVPVLLTPKND*SWRVCID-RAIN*IAIEYLFPIPC 121
Y EL+ V++LL+KG++RESMSP VV LLTPK D +W++C+D RAIN IA+ Y FPIP
Sbjct: 682 YDELNKYVTELLKKGVIRESMSPCVVSALLTPKKDGTWQMCVDSRAINKIAVRYRFPIPR 741
Query: 120 LKDLL 106
L+D+L
Sbjct: 742 LEDML 746
Score = 36.2 bits (82), Expect(2) = 1e-17
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = -3
Query: 104 HVAWCYYFLQIDMCIEYHQSQVSLGDEWKMTFKT 3
H+A F +ID+ YHQ ++ GDEWK FKT
Sbjct: 748 HLAGAKVFSKIDLRSGYHQIRMRPGDEWKTAFKT 781
>emb|CAE01890.2| OSJNBa0035O13.13 [Oryza sativa Japonica Group]
Length = 1021
Score = 75.5 bits (184), Expect(2) = 4e-17
Identities = 39/63 (61%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Frame = -2
Query: 291 ELHGQVSKLLQKGLVRESMSPSVVPVLLTPKND*SWRVCID-RAIN*IAIEYLFPIPCLK 115
E+ QV +LL KG VRES+SP VPVLL PK D SWR+C+D RAIN I I Y PIP L
Sbjct: 539 EIQRQVQELLDKGYVRESLSPCAVPVLLVPKKDGSWRMCVDCRAINNITIRYRHPIPRLD 598
Query: 114 DLL 106
D+L
Sbjct: 599 DML 601
Score = 38.1 bits (87), Expect(2) = 4e-17
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = -3
Query: 83 FLQIDMCIEYHQSQVSLGDEWKMTFKT 3
F +ID+ YHQ ++ LGDEWK TFKT
Sbjct: 610 FSKIDLRSGYHQIRMKLGDEWKTTFKT 636
>emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera]
Length = 1521
Score = 78.6 bits (192), Expect(2) = 6e-17
Identities = 40/65 (61%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Frame = -2
Query: 297 YVELHGQVSKLLQKGLVRESMSPSVVPVLLTPKND*SWRVCID-RAIN*IAIEYLFPIPC 121
+ EL QV +LL KG +RES+SP VP LLTPK D SWR+C+D RAIN I I+Y FPIP
Sbjct: 636 HAELKRQVDELLTKGFIRESLSPCGVPALLTPKKDGSWRMCVDSRAINKITIKYRFPIPR 695
Query: 120 LKDLL 106
L D+L
Sbjct: 696 LDDML 700
Score = 34.3 bits (77), Expect(2) = 6e-17
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = -3
Query: 83 FLQIDMCIEYHQSQVSLGDEWKMTFKT 3
F +ID+ YHQ ++ GDEWK +FKT
Sbjct: 709 FSKIDLRSGYHQIRIRPGDEWKTSFKT 735
>emb|CAN64427.1| hypothetical protein VITISV_029384 [Vitis vinifera]
Length = 1392
Score = 78.6 bits (192), Expect(2) = 6e-17
Identities = 40/65 (61%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Frame = -2
Query: 297 YVELHGQVSKLLQKGLVRESMSPSVVPVLLTPKND*SWRVCID-RAIN*IAIEYLFPIPC 121
+ EL QV +LL KG +RES+SP VP LLTPK D SWR+C+D RAIN I I+Y FPIP
Sbjct: 595 HAELKRQVDELLTKGFIRESLSPCGVPALLTPKKDGSWRMCVDSRAINKITIKYRFPIPR 654
Query: 120 LKDLL 106
L D+L
Sbjct: 655 LDDML 659
Score = 34.3 bits (77), Expect(2) = 6e-17
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = -3
Query: 83 FLQIDMCIEYHQSQVSLGDEWKMTFKT 3
F +ID+ YHQ ++ GDEWK +FKT
Sbjct: 668 FSKIDLRSGYHQIRIRPGDEWKTSFKT 694
>ref|XP_004980495.1| PREDICTED: uncharacterized protein LOC101772114 [Setaria italica]
Length = 1246
Score = 75.1 bits (183), Expect(2) = 6e-17
Identities = 38/63 (60%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Frame = -2
Query: 291 ELHGQVSKLLQKGLVRESMSPSVVPVLLTPKND*SWRVCID-RAIN*IAIEYLFPIPCLK 115
E+ QV +LL KG VRES+SP VPVLL PK D SWR+C+D RAIN I + Y PIP L
Sbjct: 679 EIQQQVKELLDKGYVRESLSPCAVPVLLVPKKDGSWRMCVDCRAINAITVRYRHPIPRLD 738
Query: 114 DLL 106
D+L
Sbjct: 739 DML 741
Score = 37.7 bits (86), Expect(2) = 6e-17
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = -3
Query: 83 FLQIDMCIEYHQSQVSLGDEWKMTFKT 3
F +ID+ YHQ ++ +GDEWK TFKT
Sbjct: 750 FTKIDLRSGYHQIRMKIGDEWKTTFKT 776
>gb|AAX96717.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
Japonica Group] gi|108864301|gb|ABA93040.2|
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 1748
Score = 74.3 bits (181), Expect(2) = 1e-16
Identities = 38/63 (60%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Frame = -2
Query: 291 ELHGQVSKLLQKGLVRESMSPSVVPVLLTPKND*SWRVCID-RAIN*IAIEYLFPIPCLK 115
E+ QV +LL KG VRES+SP VPV+L PK D SWR+C+D RAIN I I Y PIP L
Sbjct: 1075 EIQRQVHELLDKGYVRESLSPCAVPVILVPKKDGSWRMCVDCRAINNITIRYRHPIPRLD 1134
Query: 114 DLL 106
D+L
Sbjct: 1135 DML 1137
Score = 37.7 bits (86), Expect(2) = 1e-16
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = -3
Query: 83 FLQIDMCIEYHQSQVSLGDEWKMTFKT 3
F ++D+ YHQ ++ LGDEWK TFKT
Sbjct: 1146 FSKVDLRSGYHQIRMKLGDEWKTTFKT 1172
>gb|AAX95495.1| Retrotransposon gag protein, putative [Oryza sativa Japonica Group]
Length = 1739
Score = 74.3 bits (181), Expect(2) = 1e-16
Identities = 38/63 (60%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Frame = -2
Query: 291 ELHGQVSKLLQKGLVRESMSPSVVPVLLTPKND*SWRVCID-RAIN*IAIEYLFPIPCLK 115
E+ QV +LL KG VRES+SP VPV+L PK D SWR+C+D RAIN I I Y PIP L
Sbjct: 1066 EIQRQVHELLDKGYVRESLSPCAVPVILVPKKDGSWRMCVDCRAINNITIRYRHPIPRLD 1125
Query: 114 DLL 106
D+L
Sbjct: 1126 DML 1128
Score = 37.7 bits (86), Expect(2) = 1e-16
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = -3
Query: 83 FLQIDMCIEYHQSQVSLGDEWKMTFKT 3
F ++D+ YHQ ++ LGDEWK TFKT
Sbjct: 1137 FSKVDLRSGYHQIRMKLGDEWKTTFKT 1163
>emb|CAN80487.1| hypothetical protein VITISV_043198 [Vitis vinifera]
Length = 1499
Score = 78.6 bits (192), Expect(2) = 1e-16
Identities = 40/65 (61%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Frame = -2
Query: 297 YVELHGQVSKLLQKGLVRESMSPSVVPVLLTPKND*SWRVCID-RAIN*IAIEYLFPIPC 121
+ EL QV +LL KG +RES+SP VP LLTPK D SWR+C+D RAIN I I+Y FPIP
Sbjct: 569 HAELKRQVDELLTKGFIRESLSPCGVPALLTPKKDGSWRMCVDSRAINKITIKYRFPIPR 628
Query: 120 LKDLL 106
L D+L
Sbjct: 629 LDDML 633
Score = 33.1 bits (74), Expect(2) = 1e-16
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -3
Query: 83 FLQIDMCIEYHQSQVSLGDEWKMTFKT 3
F +ID+ YHQ + GDEWK +FKT
Sbjct: 642 FSKIDLRSGYHQICIRSGDEWKTSFKT 668
>ref|XP_007010495.1| Uncharacterized protein TCM_044370 [Theobroma cacao]
gi|508727408|gb|EOY19305.1| Uncharacterized protein
TCM_044370 [Theobroma cacao]
Length = 1306
Score = 76.3 bits (186), Expect(2) = 1e-16
Identities = 39/64 (60%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Frame = -2
Query: 294 VELHGQVSKLLQKGLVRESMSPSVVPVLLTPKND*SWRVCID-RAIN*IAIEYLFPIPCL 118
VE+ QV +LL+KGLVRES SP P LL PK D SWR+C+D RAIN I I+Y FPIP L
Sbjct: 556 VEVQRQVEELLEKGLVRESKSPCACPALLAPKKDGSWRMCVDSRAINKITIKYRFPIPRL 615
Query: 117 KDLL 106
++L
Sbjct: 616 DEML 619
Score = 35.4 bits (80), Expect(2) = 1e-16
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = -3
Query: 83 FLQIDMCIEYHQSQVSLGDEWKMTFKT 3
F +ID+ EYHQ ++ GDEWK FKT
Sbjct: 628 FSKIDLKSEYHQIRMRDGDEWKTAFKT 654
>emb|CAD39843.2| OSJNBb0072N21.12 [Oryza sativa Japonica Group]
Length = 1239
Score = 75.5 bits (184), Expect(2) = 1e-16
Identities = 39/63 (61%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Frame = -2
Query: 291 ELHGQVSKLLQKGLVRESMSPSVVPVLLTPKND*SWRVCID-RAIN*IAIEYLFPIPCLK 115
E+ QV +LL KG VRES+SP VPVLL PK D SWR+C+D RAIN I I Y PIP L
Sbjct: 539 EIQRQVQELLDKGYVRESLSPCAVPVLLVPKKDGSWRMCVDCRAINNITIRYRHPIPRLD 598
Query: 114 DLL 106
D+L
Sbjct: 599 DML 601
Score = 36.2 bits (82), Expect(2) = 1e-16
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = -3
Query: 83 FLQIDMCIEYHQSQVSLGDEWKMTFKT 3
F +ID+ YHQ ++ LGDEWK FKT
Sbjct: 610 FSKIDLRSGYHQIRMKLGDEWKTAFKT 636
>ref|XP_004309164.1| PREDICTED: uncharacterized protein LOC101300012 [Fragaria vesca
subsp. vesca]
Length = 1034
Score = 76.3 bits (186), Expect(2) = 1e-16
Identities = 38/62 (61%), Positives = 48/62 (77%), Gaps = 1/62 (1%)
Frame = -2
Query: 288 LHGQVSKLLQKGLVRESMSPSVVPVLLTPKND*SWRVCID-RAIN*IAIEYLFPIPCLKD 112
L ++ +LL+KG +RESMSP VPVLL PK D SWR+C+D RAIN I I+Y FPIP L+D
Sbjct: 679 LKEKIEELLRKGHIRESMSPCAVPVLLVPKKDRSWRMCVDSRAINKITIKYRFPIPQLED 738
Query: 111 LL 106
+L
Sbjct: 739 ML 740
Score = 35.4 bits (80), Expect(2) = 1e-16
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = -3
Query: 83 FLQIDMCIEYHQSQVSLGDEWKMTFKT 3
F +ID+ YHQ ++ LGDEWK FK+
Sbjct: 749 FSKIDLRSGYHQIRIKLGDEWKTAFKS 775
>emb|CAN69233.1| hypothetical protein VITISV_003380 [Vitis vinifera]
Length = 1292
Score = 77.0 bits (188), Expect(2) = 2e-16
Identities = 39/65 (60%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Frame = -2
Query: 297 YVELHGQVSKLLQKGLVRESMSPSVVPVLLTPKND*SWRVCID-RAIN*IAIEYLFPIPC 121
+ EL QV +LL KG +RES+SP VP LLTPK D SWR+C+D RA+N I I+Y FPIP
Sbjct: 554 HAELKRQVDELLTKGFIRESLSPYGVPALLTPKKDGSWRMCVDSRAMNKITIKYRFPIPR 613
Query: 120 LKDLL 106
L D+L
Sbjct: 614 LDDML 618
Score = 34.3 bits (77), Expect(2) = 2e-16
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = -3
Query: 83 FLQIDMCIEYHQSQVSLGDEWKMTFKT 3
F +ID+ YHQ ++ GDEWK +FKT
Sbjct: 627 FSKIDLRSGYHQIRIRPGDEWKTSFKT 653
>gb|ABF97027.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 889
Score = 74.7 bits (182), Expect(2) = 2e-16
Identities = 39/63 (61%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Frame = -2
Query: 291 ELHGQVSKLLQKGLVRESMSPSVVPVLLTPKND*SWRVCID-RAIN*IAIEYLFPIPCLK 115
E+ QV +LL KG VRES+SP VPVLL PK D SWR+C+D RAIN I I Y PIP L
Sbjct: 74 EIQRQVQELLDKGYVRESLSPCSVPVLLVPKKDGSWRMCVDCRAINNITIRYRHPIPRLD 133
Query: 114 DLL 106
D+L
Sbjct: 134 DML 136
Score = 36.6 bits (83), Expect(2) = 2e-16
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = -3
Query: 83 FLQIDMCIEYHQSQVSLGDEWKMTFKT 3
F +ID+ YHQ ++ LGDEWK FKT
Sbjct: 145 FCKIDLRSGYHQIRMKLGDEWKTAFKT 171
>gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|91795218|gb|ABE60890.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1616
Score = 74.7 bits (182), Expect(2) = 2e-16
Identities = 39/63 (61%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Frame = -2
Query: 291 ELHGQVSKLLQKGLVRESMSPSVVPVLLTPKND*SWRVCID-RAIN*IAIEYLFPIPCLK 115
E+ QV +LL KG VRES+SP VPVLL PK D SWR+C+D RAIN I I Y PIP L
Sbjct: 761 EIQRQVQELLDKGYVRESLSPCSVPVLLVPKKDGSWRMCVDCRAINNITIRYRHPIPRLD 820
Query: 114 DLL 106
D+L
Sbjct: 821 DML 823
Score = 36.2 bits (82), Expect(2) = 2e-16
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = -3
Query: 83 FLQIDMCIEYHQSQVSLGDEWKMTFKT 3
F +ID+ YHQ ++ LGDEWK FKT
Sbjct: 832 FSKIDLRSGYHQIRMKLGDEWKTAFKT 858
>dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group]
Length = 1587
Score = 74.7 bits (182), Expect(2) = 2e-16
Identities = 39/63 (61%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Frame = -2
Query: 291 ELHGQVSKLLQKGLVRESMSPSVVPVLLTPKND*SWRVCID-RAIN*IAIEYLFPIPCLK 115
E+ QV +LL KG VRES+SP VPVLL PK D SWR+C+D RAIN I I Y PIP L
Sbjct: 761 EIQRQVQELLDKGYVRESLSPCSVPVLLVPKKDGSWRMCVDCRAINNITIRYRHPIPRLD 820
Query: 114 DLL 106
D+L
Sbjct: 821 DML 823
Score = 36.2 bits (82), Expect(2) = 2e-16
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = -3
Query: 83 FLQIDMCIEYHQSQVSLGDEWKMTFKT 3
F +ID+ YHQ ++ LGDEWK FKT
Sbjct: 832 FSKIDLRSGYHQIRMKLGDEWKTAFKT 858
>ref|XP_004954917.1| PREDICTED: uncharacterized protein LOC101752491 [Setaria italica]
Length = 1295
Score = 75.1 bits (183), Expect(2) = 2e-16
Identities = 38/63 (60%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Frame = -2
Query: 291 ELHGQVSKLLQKGLVRESMSPSVVPVLLTPKND*SWRVCID-RAIN*IAIEYLFPIPCLK 115
E+ QV +LL KG VRES+SP VPVLL PK D SWR+C+D RAIN I + Y PIP L
Sbjct: 802 EIQQQVKELLDKGYVRESLSPCAVPVLLVPKKDGSWRMCVDCRAINAITVRYRHPIPRLD 861
Query: 114 DLL 106
D+L
Sbjct: 862 DML 864
Score = 35.8 bits (81), Expect(2) = 2e-16
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = -3
Query: 83 FLQIDMCIEYHQSQVSLGDEWKMTFKT 3
F +ID+ YHQ ++ +GDEWK FKT
Sbjct: 873 FTKIDLRSGYHQIRMKIGDEWKTAFKT 899
>gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|15217296|gb|AAK92640.1|AC079634_1 Putative
retroelement [Oryza sativa Japonica Group]
gi|31431373|gb|AAP53161.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1708
Score = 74.3 bits (181), Expect(2) = 3e-16
Identities = 38/63 (60%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Frame = -2
Query: 291 ELHGQVSKLLQKGLVRESMSPSVVPVLLTPKND*SWRVCID-RAIN*IAIEYLFPIPCLK 115
E+ QV +LL KG VRES+SP +PVLL PK D SWR+C+D RAIN I I Y PIP L
Sbjct: 761 EIQRQVQELLDKGYVRESLSPCSIPVLLVPKKDGSWRMCVDCRAINNITIRYRHPIPRLD 820
Query: 114 DLL 106
D+L
Sbjct: 821 DML 823
Score = 36.2 bits (82), Expect(2) = 3e-16
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = -3
Query: 83 FLQIDMCIEYHQSQVSLGDEWKMTFKT 3
F +ID+ YHQ ++ LGDEWK FKT
Sbjct: 832 FSKIDLRSGYHQIRMKLGDEWKTAFKT 858
>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
gi|31431012|gb|AAP52850.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 2447
Score = 74.3 bits (181), Expect(2) = 4e-16
Identities = 38/63 (60%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Frame = -2
Query: 291 ELHGQVSKLLQKGLVRESMSPSVVPVLLTPKND*SWRVCID-RAIN*IAIEYLFPIPCLK 115
E+ QV +LL KG VRES+SP VPV+L PK D SWR+C+D RAIN I I Y PIP L
Sbjct: 733 EIQRQVHELLDKGYVRESLSPCAVPVILVPKKDGSWRMCVDCRAINNITIRYRHPIPRLD 792
Query: 114 DLL 106
D+L
Sbjct: 793 DML 795
Score = 35.8 bits (81), Expect(2) = 4e-16
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = -3
Query: 83 FLQIDMCIEYHQSQVSLGDEWKMTFKT 3
F ++D+ YHQ ++ LGDEWK FKT
Sbjct: 804 FSKVDLRSGYHQIRMKLGDEWKTAFKT 830
>emb|CAD39981.1| OSJNBa0032B23.3 [Oryza sativa Japonica Group]
Length = 1170
Score = 73.6 bits (179), Expect(2) = 4e-16
Identities = 38/63 (60%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Frame = -2
Query: 291 ELHGQVSKLLQKGLVRESMSPSVVPVLLTPKND*SWRVCID-RAIN*IAIEYLFPIPCLK 115
E+ Q+ +LL KG VRES+SP VPVLL PK D SWR+C+D RAIN I I Y PIP L
Sbjct: 394 EIQRQMQELLDKGYVRESLSPCSVPVLLVPKKDGSWRMCVDCRAINNITIRYRHPIPRLD 453
Query: 114 DLL 106
D+L
Sbjct: 454 DML 456
Score = 36.6 bits (83), Expect(2) = 4e-16
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = -3
Query: 83 FLQIDMCIEYHQSQVSLGDEWKMTFKT 3
F +ID+ YHQ ++ LGDEWK FKT
Sbjct: 465 FYKIDLRSGYHQIRMKLGDEWKTAFKT 491