BLASTX nr result
ID: Akebia25_contig00064716
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Akebia25_contig00064716 (309 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AEJ72555.1| putative retroelement polyprotein [Malus domestica] 80 4e-14 gb|ADK92880.1| retrotransposon 4 protein [Hypericum perforatum] 52 2e-08 emb|CAN83125.1| hypothetical protein VITISV_015109 [Vitis vinifera] 57 2e-06 gb|AFN88207.1| integrase core domain containing protein [Phaseol... 49 4e-06 >gb|AEJ72555.1| putative retroelement polyprotein [Malus domestica] Length = 1249 Score = 80.5 bits (197), Expect(2) = 4e-14 Identities = 38/57 (66%), Positives = 46/57 (80%) Frame = +3 Query: 126 SSALYIPSFPSKFLFVGKLTNSLKCDTIFLPTSVIFQD*IMGKKIGEGIYSNGLYLL 296 S+ALY+PSFP + L VG+LTNSL CD IF P +VIFQD I KKIGEG+Y +GLY+L Sbjct: 366 STALYVPSFPFQLLSVGRLTNSLNCDVIFSPFNVIFQDRITKKKIGEGMYKDGLYML 422 Score = 22.7 bits (47), Expect(2) = 4e-14 Identities = 9/18 (50%), Positives = 14/18 (77%) Frame = +1 Query: 52 LSVANGTSVPIHGCGQIR 105 +SVANGT V + G G+++ Sbjct: 341 VSVANGTGVSVLGEGKVK 358 >gb|ADK92880.1| retrotransposon 4 protein [Hypericum perforatum] Length = 1347 Score = 52.0 bits (123), Expect(2) = 2e-08 Identities = 26/59 (44%), Positives = 33/59 (55%) Frame = +3 Query: 132 ALYIPSFPSKFLFVGKLTNSLKCDTIFLPTSVIFQD*IMGKKIGEGIYSNGLYLLQQSS 308 +L +P + L + KLT L C IF V FQD + KIGEG NGLY+L+Q S Sbjct: 349 SLLVPKLSNNLLSISKLTKDLNCVAIFSANKVEFQDCLTRTKIGEGSLKNGLYVLEQCS 407 Score = 32.3 bits (72), Expect(2) = 2e-08 Identities = 13/33 (39%), Positives = 20/33 (60%) Frame = +1 Query: 19 LSNFTSQTGKTLSVANGTSVPIHGCGQIRFFFN 117 L+N + + VANG +P+ G G+I+FF N Sbjct: 311 LTNVSQSENCFIQVANGAKIPVKGSGKIKFFQN 343 >emb|CAN83125.1| hypothetical protein VITISV_015109 [Vitis vinifera] Length = 1355 Score = 57.4 bits (137), Expect = 2e-06 Identities = 27/55 (49%), Positives = 36/55 (65%) Frame = +3 Query: 126 SSALYIPSFPSKFLFVGKLTNSLKCDTIFLPTSVIFQD*IMGKKIGEGIYSNGLY 290 S LY+PSFP + L V +LT++L CD +F V+FQD I K IGEG +GL+ Sbjct: 421 SEVLYVPSFPVQLLSVQQLTSTLNCDVLFTSDKVLFQDRITKKTIGEGFQLHGLF 475 >gb|AFN88207.1| integrase core domain containing protein [Phaseolus vulgaris] Length = 1387 Score = 48.9 bits (115), Expect(2) = 4e-06 Identities = 26/60 (43%), Positives = 33/60 (55%) Frame = +3 Query: 129 SALYIPSFPSKFLFVGKLTNSLKCDTIFLPTSVIFQD*IMGKKIGEGIYSNGLYLLQQSS 308 + LY+P P L + +LT SL C F SV QD G+ IG G S+GLY LQ S+ Sbjct: 412 NVLYVPGSPFNLLSISRLTRSLDCVISFTKDSVSLQDRCSGRMIGTGCESHGLYQLQISA 471 Score = 27.3 bits (59), Expect(2) = 4e-06 Identities = 11/33 (33%), Positives = 19/33 (57%) Frame = +1 Query: 49 TLSVANGTSVPIHGCGQIRFFFNIPVHQLFTSP 147 ++++ANG VP HG G I F ++ + + P Sbjct: 385 SVTMANGYKVPSHGVGTINLFPSLSIDNVLYVP 417