BLASTX nr result

ID: Akebia25_contig00064716 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00064716
         (309 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEJ72555.1| putative retroelement polyprotein [Malus domestica]     80   4e-14
gb|ADK92880.1| retrotransposon 4 protein [Hypericum perforatum]        52   2e-08
emb|CAN83125.1| hypothetical protein VITISV_015109 [Vitis vinifera]    57   2e-06
gb|AFN88207.1| integrase core domain containing protein [Phaseol...    49   4e-06

>gb|AEJ72555.1| putative retroelement polyprotein [Malus domestica]
          Length = 1249

 Score = 80.5 bits (197), Expect(2) = 4e-14
 Identities = 38/57 (66%), Positives = 46/57 (80%)
 Frame = +3

Query: 126 SSALYIPSFPSKFLFVGKLTNSLKCDTIFLPTSVIFQD*IMGKKIGEGIYSNGLYLL 296
           S+ALY+PSFP + L VG+LTNSL CD IF P +VIFQD I  KKIGEG+Y +GLY+L
Sbjct: 366 STALYVPSFPFQLLSVGRLTNSLNCDVIFSPFNVIFQDRITKKKIGEGMYKDGLYML 422



 Score = 22.7 bits (47), Expect(2) = 4e-14
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = +1

Query: 52  LSVANGTSVPIHGCGQIR 105
           +SVANGT V + G G+++
Sbjct: 341 VSVANGTGVSVLGEGKVK 358


>gb|ADK92880.1| retrotransposon 4 protein [Hypericum perforatum]
          Length = 1347

 Score = 52.0 bits (123), Expect(2) = 2e-08
 Identities = 26/59 (44%), Positives = 33/59 (55%)
 Frame = +3

Query: 132 ALYIPSFPSKFLFVGKLTNSLKCDTIFLPTSVIFQD*IMGKKIGEGIYSNGLYLLQQSS 308
           +L +P   +  L + KLT  L C  IF    V FQD +   KIGEG   NGLY+L+Q S
Sbjct: 349 SLLVPKLSNNLLSISKLTKDLNCVAIFSANKVEFQDCLTRTKIGEGSLKNGLYVLEQCS 407



 Score = 32.3 bits (72), Expect(2) = 2e-08
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = +1

Query: 19  LSNFTSQTGKTLSVANGTSVPIHGCGQIRFFFN 117
           L+N +      + VANG  +P+ G G+I+FF N
Sbjct: 311 LTNVSQSENCFIQVANGAKIPVKGSGKIKFFQN 343


>emb|CAN83125.1| hypothetical protein VITISV_015109 [Vitis vinifera]
          Length = 1355

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 27/55 (49%), Positives = 36/55 (65%)
 Frame = +3

Query: 126 SSALYIPSFPSKFLFVGKLTNSLKCDTIFLPTSVIFQD*IMGKKIGEGIYSNGLY 290
           S  LY+PSFP + L V +LT++L CD +F    V+FQD I  K IGEG   +GL+
Sbjct: 421 SEVLYVPSFPVQLLSVQQLTSTLNCDVLFTSDKVLFQDRITKKTIGEGFQLHGLF 475


>gb|AFN88207.1| integrase core domain containing protein [Phaseolus vulgaris]
          Length = 1387

 Score = 48.9 bits (115), Expect(2) = 4e-06
 Identities = 26/60 (43%), Positives = 33/60 (55%)
 Frame = +3

Query: 129 SALYIPSFPSKFLFVGKLTNSLKCDTIFLPTSVIFQD*IMGKKIGEGIYSNGLYLLQQSS 308
           + LY+P  P   L + +LT SL C   F   SV  QD   G+ IG G  S+GLY LQ S+
Sbjct: 412 NVLYVPGSPFNLLSISRLTRSLDCVISFTKDSVSLQDRCSGRMIGTGCESHGLYQLQISA 471



 Score = 27.3 bits (59), Expect(2) = 4e-06
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +1

Query: 49  TLSVANGTSVPIHGCGQIRFFFNIPVHQLFTSP 147
           ++++ANG  VP HG G I  F ++ +  +   P
Sbjct: 385 SVTMANGYKVPSHGVGTINLFPSLSIDNVLYVP 417


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