BLASTX nr result
ID: Akebia25_contig00064079
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Akebia25_contig00064079 (397 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004292285.1| PREDICTED: uncharacterized protein LOC101302... 64 2e-08 gb|ABD28291.1| Integrase, catalytic region; Ribonuclease H [Medi... 53 3e-06 >ref|XP_004292285.1| PREDICTED: uncharacterized protein LOC101302525 [Fragaria vesca subsp. vesca] Length = 339 Score = 63.5 bits (153), Expect(2) = 2e-08 Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 11/122 (9%) Frame = +1 Query: 1 PIIKFPQEGRLPPRKFEILKLQRFVKKFYINEEM*YK----GETLRCLHGDKTVQTMIEV 168 P ++F + LP K+++ ++ ++ + Y+ G+ LRCL ++ Q + E+ Sbjct: 99 PYLEFLLDKILPADANLKYKVKKTAARYVVDGGILYRKGFNGKPLRCLGSTESQQVLEEI 158 Query: 169 HVGQVGENQGKRKWFQHLLQKGDYWT*F-------AQRCVSC*IHRDLIHVPTILKQDIS 327 HVG+ GE+QGK+ ++ LL G YW + C +C H +LI P+ + QD+ Sbjct: 159 HVGECGEHQGKKSLYRQLLSLGYYWPTMRKDAYMRVKTCHTCQAHANLIRKPSTILQDMG 218 Query: 328 TP 333 TP Sbjct: 219 TP 220 Score = 20.8 bits (42), Expect(2) = 2e-08 Identities = 7/17 (41%), Positives = 9/17 (52%) Frame = +2 Query: 329 PLDFLAWGQNLISTINP 379 P F WG + + INP Sbjct: 220 PWPFHTWGLDFVGKINP 236 >gb|ABD28291.1| Integrase, catalytic region; Ribonuclease H [Medicago truncatula] Length = 981 Score = 53.1 bits (126), Expect(2) = 3e-06 Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 11/102 (10%) Frame = +1 Query: 61 LQRFVKKFYINEEM*YK----GETLRCLHGDKTVQTMIEVHVGQVGENQGKRKWFQHLLQ 228 L++ +F++NE++ YK G LRC+ + + M E+H G G + + +L+ Sbjct: 592 LRKLSSRFFLNEDVLYKRNFDGVLLRCVDKHEAEKLMREIHEGSFGTHSCGHAMAKKILR 651 Query: 229 KGDYWT*F-------AQRCVSC*IHRDLIHVPTILKQDISTP 333 G YW A+RC C I+ D IH+P + IS+P Sbjct: 652 AGYYWITMHADCYNHAKRCHKCQIYADKIHIPPSMLNVISSP 693 Score = 23.5 bits (49), Expect(2) = 3e-06 Identities = 10/21 (47%), Positives = 12/21 (57%) Frame = +2 Query: 320 ISLPLDFLAWGQNLISTINPK 382 IS P F WG ++I I PK Sbjct: 690 ISSPWPFSMWGIDMIGRIEPK 710