BLASTX nr result

ID: Akebia25_contig00064079 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00064079
         (397 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004292285.1| PREDICTED: uncharacterized protein LOC101302...    64   2e-08
gb|ABD28291.1| Integrase, catalytic region; Ribonuclease H [Medi...    53   3e-06

>ref|XP_004292285.1| PREDICTED: uncharacterized protein LOC101302525 [Fragaria vesca
           subsp. vesca]
          Length = 339

 Score = 63.5 bits (153), Expect(2) = 2e-08
 Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 11/122 (9%)
 Frame = +1

Query: 1   PIIKFPQEGRLPPRKFEILKLQRFVKKFYINEEM*YK----GETLRCLHGDKTVQTMIEV 168
           P ++F  +  LP       K+++   ++ ++  + Y+    G+ LRCL   ++ Q + E+
Sbjct: 99  PYLEFLLDKILPADANLKYKVKKTAARYVVDGGILYRKGFNGKPLRCLGSTESQQVLEEI 158

Query: 169 HVGQVGENQGKRKWFQHLLQKGDYWT*F-------AQRCVSC*IHRDLIHVPTILKQDIS 327
           HVG+ GE+QGK+  ++ LL  G YW           + C +C  H +LI  P+ + QD+ 
Sbjct: 159 HVGECGEHQGKKSLYRQLLSLGYYWPTMRKDAYMRVKTCHTCQAHANLIRKPSTILQDMG 218

Query: 328 TP 333
           TP
Sbjct: 219 TP 220



 Score = 20.8 bits (42), Expect(2) = 2e-08
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = +2

Query: 329 PLDFLAWGQNLISTINP 379
           P  F  WG + +  INP
Sbjct: 220 PWPFHTWGLDFVGKINP 236


>gb|ABD28291.1| Integrase, catalytic region; Ribonuclease H [Medicago truncatula]
          Length = 981

 Score = 53.1 bits (126), Expect(2) = 3e-06
 Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 11/102 (10%)
 Frame = +1

Query: 61  LQRFVKKFYINEEM*YK----GETLRCLHGDKTVQTMIEVHVGQVGENQGKRKWFQHLLQ 228
           L++   +F++NE++ YK    G  LRC+   +  + M E+H G  G +       + +L+
Sbjct: 592 LRKLSSRFFLNEDVLYKRNFDGVLLRCVDKHEAEKLMREIHEGSFGTHSCGHAMAKKILR 651

Query: 229 KGDYWT*F-------AQRCVSC*IHRDLIHVPTILKQDISTP 333
            G YW          A+RC  C I+ D IH+P  +   IS+P
Sbjct: 652 AGYYWITMHADCYNHAKRCHKCQIYADKIHIPPSMLNVISSP 693



 Score = 23.5 bits (49), Expect(2) = 3e-06
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +2

Query: 320 ISLPLDFLAWGQNLISTINPK 382
           IS P  F  WG ++I  I PK
Sbjct: 690 ISSPWPFSMWGIDMIGRIEPK 710


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