BLASTX nr result

ID: Akebia25_contig00063653 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00063653
         (353 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272277.1| PREDICTED: zinc finger CCCH domain-containin...    79   7e-13
gb|EXC01341.1| Zinc finger CCCH domain-containing protein 62 [Mo...    64   2e-08
ref|XP_006357416.1| PREDICTED: zinc finger CCCH domain-containin...    63   4e-08
ref|XP_004241882.1| PREDICTED: zinc finger CCCH domain-containin...    62   6e-08
ref|XP_004305763.1| PREDICTED: zinc finger CCCH domain-containin...    60   2e-07

>ref|XP_002272277.1| PREDICTED: zinc finger CCCH domain-containing protein 62 [Vitis
           vinifera] gi|297742965|emb|CBI35832.3| unnamed protein
           product [Vitis vinifera]
          Length = 438

 Score = 79.0 bits (193), Expect = 7e-13
 Identities = 43/76 (56%), Positives = 57/76 (75%), Gaps = 2/76 (2%)
 Frame = +1

Query: 130 PTYDIIEETCSDFSNLTL-KKSKSRSSQVIDSACKMELDDVELKVQDLNG-DQSSFEIIE 303
           PTYDI EET S FSNL++ KKSKSR  + +D     +LDDVE+    L+  D+ SFE+++
Sbjct: 35  PTYDIFEETQSGFSNLSMEKKSKSRIQKEMDMGFVEDLDDVEIVAPVLDEKDEKSFEMVQ 94

Query: 304 KIIQAGQLEKLKVEQC 351
           K+I+AGQLEKLKV+QC
Sbjct: 95  KMIEAGQLEKLKVDQC 110


>gb|EXC01341.1| Zinc finger CCCH domain-containing protein 62 [Morus notabilis]
          Length = 397

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 35/77 (45%), Positives = 54/77 (70%), Gaps = 3/77 (3%)
 Frame = +1

Query: 130 PTYDIIEETCSDFSNLTLKKSKSRSS--QVIDSACKMELDDVELKVQDLNG-DQSSFEII 300
           P Y I+EET S  S L++K  K+++S  + ID A + E D  +L + +L+  D+ SFE +
Sbjct: 29  PIYSILEETHSKLSKLSIKNKKAKASIVEAIDLADEAESDGRDLVLPELDEIDEKSFEQV 88

Query: 301 EKIIQAGQLEKLKVEQC 351
           ++II+AGQ+EKLKV+QC
Sbjct: 89  QRIIRAGQIEKLKVDQC 105


>ref|XP_006357416.1| PREDICTED: zinc finger CCCH domain-containing protein 62-like
           [Solanum tuberosum]
          Length = 516

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 34/81 (41%), Positives = 51/81 (62%), Gaps = 7/81 (8%)
 Frame = +1

Query: 130 PTYDIIEETCSDFSNLTLKKSKSRS-------SQVIDSACKMELDDVELKVQDLNGDQSS 288
           PT+D++EET S  S L++KK KS         S+ ++   + E D  E+  +    D+ S
Sbjct: 46  PTFDLLEETQSSLSKLSIKKQKSMDMSARRNVSKTLEDCVEEEKDLDEIVPELDEKDKKS 105

Query: 289 FEIIEKIIQAGQLEKLKVEQC 351
           +E ++KII+AGQ+EKLKVEQC
Sbjct: 106 YETVQKIIKAGQIEKLKVEQC 126


>ref|XP_004241882.1| PREDICTED: zinc finger CCCH domain-containing protein 62-like
           [Solanum lycopersicum]
          Length = 497

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 34/84 (40%), Positives = 49/84 (58%), Gaps = 10/84 (11%)
 Frame = +1

Query: 130 PTYDIIEETCSDFSNLTLKKSKSRSSQVIDSACKMELDDVELKVQDLNG----------D 279
           PT+D++EET S  S L++KK KS     +       L+D   + +DL            D
Sbjct: 26  PTFDLLEETQSSLSKLSIKKQKSMDIMSVRRNVSKALEDCVEEEKDLEEVVIVPELDEKD 85

Query: 280 QSSFEIIEKIIQAGQLEKLKVEQC 351
           + S+E ++KII+AGQ+EKLKVEQC
Sbjct: 86  KKSYETVQKIIKAGQIEKLKVEQC 109


>ref|XP_004305763.1| PREDICTED: zinc finger CCCH domain-containing protein 62-like
           [Fragaria vesca subsp. vesca]
          Length = 460

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 37/76 (48%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
 Frame = +1

Query: 130 PTYDIIEETCSDFSNLTLK-KSKSRSSQVIDSACKMELDDVELKVQDLNG-DQSSFEIIE 303
           P+Y  +EET + FSNL++K KSK+R  +VID   + E D  E+ V +LN  D  S+E + 
Sbjct: 24  PSYSTLEETHAKFSNLSVKTKSKTRIVEVID--VEEEPDGEEVVVPELNQIDAKSYEHVH 81

Query: 304 KIIQAGQLEKLKVEQC 351
           KIIQ  Q+EK+KVE C
Sbjct: 82  KIIQDNQIEKMKVEHC 97


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