BLASTX nr result

ID: Akebia25_contig00063173 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00063173
         (334 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_007905716.1| ribosomal protein S2 (mitochondrion) [Liriod...   155   4e-36
gb|AHA47127.1| ribosomal protein S2 (mitochondrion) [Amborella t...   145   7e-33
ref|YP_006280949.1| ribosomal protein S2 (mitochondrion) [Spirod...   144   2e-32
ref|XP_006359120.1| PREDICTED: UTP--glucose-1-phosphate uridylyl...   131   9e-29
ref|YP_005090383.1| ribosomal protein S2 (mitochondrion) [Phoeni...   130   2e-28
gb|AEK66726.1| ribosomal protein S2 [Ferrocalamus rimosivaginus]...   129   3e-28
gb|ABY55188.1| ribosomal protein S2 [Bambusa oldhamii]                129   4e-28
ref|XP_003634646.1| PREDICTED: ribosomal protein S2, mitochondri...   128   7e-28
ref|XP_004229545.1| PREDICTED: UTP--glucose-1-phosphate uridylyl...   127   1e-27
dbj|BAJ22098.1| ribosomal protein S2 [Cycas taitungensis]             127   1e-27
gb|ABD93529.2| mitochondrial small ribosomal subunit protein [Co...   127   1e-27
gb|ABD93528.2| mitochondrial small ribosomal subunit protein [So...   124   1e-26
dbj|BAD61010.1| ribosomal protein S2 [Hordeum vulgare subsp. vul...   124   2e-26
gb|ABD93526.2| mitochondrial small ribosomal subunit protein [Ni...   124   2e-26
gb|ABD93525.2| mitochondrial small ribosomal subunit protein [Pe...   122   7e-26
gb|AHI16396.1| rps2 (mitochondrion) [Triticum turgidum subsp. du...   121   9e-26
gb|AHI16366.1| rps2 (mitochondrion) [Triticum turgidum subsp. du...   121   9e-26
ref|YP_008757354.1| ribosomal protein small subunit 2 (mitochond...   121   9e-26
ref|YP_008758150.1| ribosomal protein small subunit 2 (mitochond...   121   9e-26
ref|YP_398416.1| rps2 [Triticum aestivum] gi|78675256|dbj|BAE476...   121   9e-26

>ref|YP_007905716.1| ribosomal protein S2 (mitochondrion) [Liriodendron tulipifera]
           gi|480541920|gb|AGJ90413.1| ribosomal protein S2
           (mitochondrion) [Liriodendron tulipifera]
          Length = 206

 Score =  155 bits (393), Expect = 4e-36
 Identities = 77/83 (92%), Positives = 79/83 (95%)
 Frame = +3

Query: 84  IHSIVMNKLLSTNAHLGRRVAAHHFKVYICGSRNGIAILDSDKTLICLRNACNFIGSLIR 263
           IHSIV+ KLLSTNAHLGRRVAAHHFKVYICGSRNGIAILDSDKTLICLRNAC+FIGS IR
Sbjct: 3   IHSIVIQKLLSTNAHLGRRVAAHHFKVYICGSRNGIAILDSDKTLICLRNACHFIGSPIR 62

Query: 264 QKGRSFFVNTNSLFDEITTQMAT 332
           QKGRSFFVNTNSLFDEI  QMAT
Sbjct: 63  QKGRSFFVNTNSLFDEIMEQMAT 85


>gb|AHA47127.1| ribosomal protein S2 (mitochondrion) [Amborella trichopoda]
          Length = 221

 Score =  145 bits (365), Expect = 7e-33
 Identities = 71/81 (87%), Positives = 75/81 (92%)
 Frame = +3

Query: 90  SIVMNKLLSTNAHLGRRVAAHHFKVYICGSRNGIAILDSDKTLICLRNACNFIGSLIRQK 269
           S+V+ K LSTNAHLGRRVAAHHF+VYICGSRNGI ILDSDKTLICLRNAC+FIGS IRQK
Sbjct: 6   SLVIQKSLSTNAHLGRRVAAHHFQVYICGSRNGITILDSDKTLICLRNACHFIGSPIRQK 65

Query: 270 GRSFFVNTNSLFDEITTQMAT 332
           GRSFFVNTNSLFDEI  QMAT
Sbjct: 66  GRSFFVNTNSLFDEIMEQMAT 86


>ref|YP_006280949.1| ribosomal protein S2 (mitochondrion) [Spirodela polyrhiza]
           gi|385252651|gb|AFI54959.1| ribosomal protein S2
           (mitochondrion) [Spirodela polyrhiza]
          Length = 219

 Score =  144 bits (362), Expect = 2e-32
 Identities = 73/84 (86%), Positives = 77/84 (91%), Gaps = 1/84 (1%)
 Frame = +3

Query: 84  IHSIVMNKLLSTNAHLGRRVAAHHFKVYICGSRNGIAILDSDKTLICLRNACNFIGSLIR 263
           IHSIV+ KLLSTNAHLGRRVAAHHFKVYICGSRNGIAILDSDKTLICLRNAC+FIGS IR
Sbjct: 3   IHSIVIQKLLSTNAHLGRRVAAHHFKVYICGSRNGIAILDSDKTLICLRNACHFIGSPIR 62

Query: 264 QKGRSFFVNTNSLF-DEITTQMAT 332
           QKGRSFF+ T+ LF DEI  QMAT
Sbjct: 63  QKGRSFFLKTHHLFKDEIMEQMAT 86


>ref|XP_006359120.1| PREDICTED: UTP--glucose-1-phosphate uridylyltransferase-like
           [Solanum tuberosum]
          Length = 607

 Score =  131 bits (330), Expect = 9e-29
 Identities = 61/81 (75%), Positives = 71/81 (87%)
 Frame = +3

Query: 84  IHSIVMNKLLSTNAHLGRRVAAHHFKVYICGSRNGIAILDSDKTLICLRNACNFIGSLIR 263
           IHS+V+ KLLSTNAHLGRRVAAHHFK+Y  GSRNG+ I+DS+KTLICLRNAC+FIG L+R
Sbjct: 3   IHSVVIQKLLSTNAHLGRRVAAHHFKIYSIGSRNGMTIVDSEKTLICLRNACSFIGELVR 62

Query: 264 QKGRSFFVNTNSLFDEITTQM 326
           Q+ R  FVNTN+LFDEI  QM
Sbjct: 63  QRARFIFVNTNTLFDEIIDQM 83


>ref|YP_005090383.1| ribosomal protein S2 (mitochondrion) [Phoenix dactylifera]
           gi|343478435|gb|AEM43923.1| ribosomal protein S2
           (mitochondrion) [Phoenix dactylifera]
          Length = 226

 Score =  130 bits (326), Expect = 2e-28
 Identities = 67/84 (79%), Positives = 73/84 (86%), Gaps = 1/84 (1%)
 Frame = +3

Query: 84  IHSIVMNKLLSTNAHLGRRVAAHHFKVYICGSRNGIAILDSDKTLICLRNACNFIGSLIR 263
           IHSIV  KLLSTNAHLGRRVAAHHFKVYICGSRNGIAILDSDKTLICLRNA +FIGS IR
Sbjct: 3   IHSIVCTKLLSTNAHLGRRVAAHHFKVYICGSRNGIAILDSDKTLICLRNAFHFIGSPIR 62

Query: 264 QKGRSFFVNTNS-LFDEITTQMAT 332
           QKGRSFF+ T + +  EI  +MA+
Sbjct: 63  QKGRSFFLKTETFIIYEIMEEMAS 86


>gb|AEK66726.1| ribosomal protein S2 [Ferrocalamus rimosivaginus]
           gi|372861935|gb|AEX98087.1| ribosomal protein S2
           (mitochondrion) [Ferrocalamus rimosivaginus]
          Length = 485

 Score =  129 bits (325), Expect = 3e-28
 Identities = 68/84 (80%), Positives = 73/84 (86%), Gaps = 1/84 (1%)
 Frame = +3

Query: 84  IHSIVMNKLLSTNAHLGRRVAAHHFKVYICGSRNGIAILDSDKTLICLRNACNFIGSLIR 263
           I SIV +KLL TNAHLGRRVAAHHFKVYICGSRNGIAILDSDKTLICLRNA +FIGS IR
Sbjct: 3   ILSIVCSKLLCTNAHLGRRVAAHHFKVYICGSRNGIAILDSDKTLICLRNALHFIGSPIR 62

Query: 264 QKGRSFFVNTNSLFD-EITTQMAT 332
           QKGRSFF+ TN LF  EI  +MA+
Sbjct: 63  QKGRSFFLKTNHLFRYEIMEEMAS 86


>gb|ABY55188.1| ribosomal protein S2 [Bambusa oldhamii]
          Length = 421

 Score =  129 bits (324), Expect = 4e-28
 Identities = 68/84 (80%), Positives = 72/84 (85%), Gaps = 1/84 (1%)
 Frame = +3

Query: 84  IHSIVMNKLLSTNAHLGRRVAAHHFKVYICGSRNGIAILDSDKTLICLRNACNFIGSLIR 263
           I SIV  KLL TNAHLGRRVAAHHFKVYICGSRNGIAILDSDKTLICLRNA +FIGS IR
Sbjct: 3   ILSIVCKKLLCTNAHLGRRVAAHHFKVYICGSRNGIAILDSDKTLICLRNALHFIGSPIR 62

Query: 264 QKGRSFFVNTNSLFD-EITTQMAT 332
           QKGRSFF+ TN LF  EI  +MA+
Sbjct: 63  QKGRSFFLKTNHLFRYEIMEEMAS 86


>ref|XP_003634646.1| PREDICTED: ribosomal protein S2, mitochondrial-like [Vitis
           vinifera]
          Length = 253

 Score =  128 bits (322), Expect = 7e-28
 Identities = 59/81 (72%), Positives = 69/81 (85%)
 Frame = +3

Query: 84  IHSIVMNKLLSTNAHLGRRVAAHHFKVYICGSRNGIAILDSDKTLICLRNACNFIGSLIR 263
           IHS+V+ KLLSTNAH+GRR+  HHFKVY  G RNG A++DSDKTLIC+RNAC+F+ SL+R
Sbjct: 3   IHSLVIQKLLSTNAHMGRRLVEHHFKVYTYGFRNGCAVIDSDKTLICMRNACDFMASLVR 62

Query: 264 QKGRSFFVNTNSLFDEITTQM 326
           QKGR  FVNTNSLFDEI  QM
Sbjct: 63  QKGRFLFVNTNSLFDEIVEQM 83


>ref|XP_004229545.1| PREDICTED: UTP--glucose-1-phosphate uridylyltransferase-like
           [Solanum lycopersicum]
          Length = 607

 Score =  127 bits (320), Expect = 1e-27
 Identities = 59/81 (72%), Positives = 69/81 (85%)
 Frame = +3

Query: 84  IHSIVMNKLLSTNAHLGRRVAAHHFKVYICGSRNGIAILDSDKTLICLRNACNFIGSLIR 263
           IHS+V+ KLLSTNAHLGRRVA HHFK+Y  GSRNG+ I+DS+K LICLRNAC+FIG L+R
Sbjct: 3   IHSVVIQKLLSTNAHLGRRVAEHHFKIYSVGSRNGMTIIDSEKQLICLRNACSFIGELVR 62

Query: 264 QKGRSFFVNTNSLFDEITTQM 326
           Q+ R  FVNTN+LFDEI  QM
Sbjct: 63  QRARFIFVNTNTLFDEIIDQM 83


>dbj|BAJ22098.1| ribosomal protein S2 [Cycas taitungensis]
          Length = 216

 Score =  127 bits (320), Expect = 1e-27
 Identities = 65/80 (81%), Positives = 70/80 (87%)
 Frame = +3

Query: 90  SIVMNKLLSTNAHLGRRVAAHHFKVYICGSRNGIAILDSDKTLICLRNACNFIGSLIRQK 269
           S+V+ KLLSTNAHLGRRVAA+H KVYI G  N IAILDSDKTLICLRNAC+FIGSLIR+K
Sbjct: 6   SLVLQKLLSTNAHLGRRVAAYHSKVYIYGFGNEIAILDSDKTLICLRNACHFIGSLIRKK 65

Query: 270 GRSFFVNTNSLFDEITTQMA 329
           GR  FVNTNSLFDEI  QMA
Sbjct: 66  GRLLFVNTNSLFDEIIEQMA 85


>gb|ABD93529.2| mitochondrial small ribosomal subunit protein [Coffea canephora]
          Length = 173

 Score =  127 bits (320), Expect = 1e-27
 Identities = 59/74 (79%), Positives = 66/74 (89%)
 Frame = +3

Query: 105 KLLSTNAHLGRRVAAHHFKVYICGSRNGIAILDSDKTLICLRNACNFIGSLIRQKGRSFF 284
           KLLSTNAHLGRRVAAHHFK+Y CGSRN + I+DSDKTLICLRNACNFIG+L+R KGR  F
Sbjct: 2   KLLSTNAHLGRRVAAHHFKIYSCGSRNAMTIIDSDKTLICLRNACNFIGNLVRLKGRFLF 61

Query: 285 VNTNSLFDEITTQM 326
           VNTN+LFDEI  +M
Sbjct: 62  VNTNTLFDEIIEEM 75


>gb|ABD93528.2| mitochondrial small ribosomal subunit protein [Solanum tuberosum]
          Length = 175

 Score =  124 bits (312), Expect = 1e-26
 Identities = 58/77 (75%), Positives = 67/77 (87%)
 Frame = +3

Query: 96  VMNKLLSTNAHLGRRVAAHHFKVYICGSRNGIAILDSDKTLICLRNACNFIGSLIRQKGR 275
           V+ KLLSTNAHLGRRVAAHHFK+Y  GSRNG+ I+DS+KTLICLRNAC+FIG L+RQ+ R
Sbjct: 1   VIQKLLSTNAHLGRRVAAHHFKIYSIGSRNGMTIIDSEKTLICLRNACSFIGELVRQRAR 60

Query: 276 SFFVNTNSLFDEITTQM 326
             FVNTN+LFDEI  QM
Sbjct: 61  FIFVNTNTLFDEIIDQM 77


>dbj|BAD61010.1| ribosomal protein S2 [Hordeum vulgare subsp. vulgare]
          Length = 562

 Score =  124 bits (310), Expect = 2e-26
 Identities = 66/82 (80%), Positives = 70/82 (85%), Gaps = 1/82 (1%)
 Frame = +3

Query: 90  SIVMNKLLSTNAHLGRRVAAHHFKVYICGSRNGIAILDSDKTLICLRNACNFIGSLIRQK 269
           SIV  KLL TNAHLGRRVA HHFKVYI GSRNGIAILDSDKTLICLRNA +FIGS IRQK
Sbjct: 5   SIVCTKLLCTNAHLGRRVADHHFKVYIRGSRNGIAILDSDKTLICLRNALHFIGSPIRQK 64

Query: 270 GRSFFVNTNSLF-DEITTQMAT 332
           GRSFF+ TN LF  EIT +MA+
Sbjct: 65  GRSFFLKTNHLFIYEITEEMAS 86


>gb|ABD93526.2| mitochondrial small ribosomal subunit protein [Nicotiana
           tomentosiformis]
          Length = 171

 Score =  124 bits (310), Expect = 2e-26
 Identities = 57/74 (77%), Positives = 64/74 (86%)
 Frame = +3

Query: 105 KLLSTNAHLGRRVAAHHFKVYICGSRNGIAILDSDKTLICLRNACNFIGSLIRQKGRSFF 284
           KLLSTNAHLGRRVAAHHFK+Y CGSRN + I+DSDKTLICLRNAC+FIG L+R + R  F
Sbjct: 2   KLLSTNAHLGRRVAAHHFKIYSCGSRNAMTIIDSDKTLICLRNACSFIGELVRNRARFIF 61

Query: 285 VNTNSLFDEITTQM 326
           VNTN+LFDEI  QM
Sbjct: 62  VNTNTLFDEIIDQM 75


>gb|ABD93525.2| mitochondrial small ribosomal subunit protein [Petunia axillaris
           subsp. parodii]
          Length = 172

 Score =  122 bits (305), Expect = 7e-26
 Identities = 57/74 (77%), Positives = 63/74 (85%)
 Frame = +3

Query: 105 KLLSTNAHLGRRVAAHHFKVYICGSRNGIAILDSDKTLICLRNACNFIGSLIRQKGRSFF 284
           KLLSTNA LGRRVAAHHFK+Y CGSRN + I+DSDKTLICLRNAC+FIG L+R K R  F
Sbjct: 2   KLLSTNAQLGRRVAAHHFKIYSCGSRNAMTIIDSDKTLICLRNACSFIGELVRNKARFIF 61

Query: 285 VNTNSLFDEITTQM 326
           VNTN+LFDEI  QM
Sbjct: 62  VNTNTLFDEIIDQM 75


>gb|AHI16396.1| rps2 (mitochondrion) [Triticum turgidum subsp. durum]
          Length = 360

 Score =  121 bits (304), Expect = 9e-26
 Identities = 65/82 (79%), Positives = 69/82 (84%), Gaps = 1/82 (1%)
 Frame = +3

Query: 90  SIVMNKLLSTNAHLGRRVAAHHFKVYICGSRNGIAILDSDKTLICLRNACNFIGSLIRQK 269
           SIV  KLL TNAHLGRRVA HHFKVYI GSRNGIAILDSDKTLICLRNA +FIGS  RQK
Sbjct: 5   SIVCTKLLCTNAHLGRRVADHHFKVYIRGSRNGIAILDSDKTLICLRNALHFIGSPSRQK 64

Query: 270 GRSFFVNTNSLF-DEITTQMAT 332
           GRSFF+ TN LF  EIT +MA+
Sbjct: 65  GRSFFLKTNHLFIFEITEEMAS 86


>gb|AHI16366.1| rps2 (mitochondrion) [Triticum turgidum subsp. durum]
          Length = 360

 Score =  121 bits (304), Expect = 9e-26
 Identities = 65/82 (79%), Positives = 69/82 (84%), Gaps = 1/82 (1%)
 Frame = +3

Query: 90  SIVMNKLLSTNAHLGRRVAAHHFKVYICGSRNGIAILDSDKTLICLRNACNFIGSLIRQK 269
           SIV  KLL TNAHLGRRVA HHFKVYI GSRNGIAILDSDKTLICLRNA +FIGS  RQK
Sbjct: 5   SIVCTKLLCTNAHLGRRVADHHFKVYIRGSRNGIAILDSDKTLICLRNALHFIGSPSRQK 64

Query: 270 GRSFFVNTNSLF-DEITTQMAT 332
           GRSFF+ TN LF  EIT +MA+
Sbjct: 65  GRSFFLKTNHLFIYEITEEMAS 86


>ref|YP_008757354.1| ribosomal protein small subunit 2 (mitochondrion) [Aegilops
           speltoides] gi|549067761|dbj|BAN94732.1| ribosomal
           protein small subunit 2 (mitochondrion) [Aegilops
           speltoides]
          Length = 360

 Score =  121 bits (304), Expect = 9e-26
 Identities = 65/82 (79%), Positives = 69/82 (84%), Gaps = 1/82 (1%)
 Frame = +3

Query: 90  SIVMNKLLSTNAHLGRRVAAHHFKVYICGSRNGIAILDSDKTLICLRNACNFIGSLIRQK 269
           SIV  KLL TNAHLGRRVA HHFKVYI GSRNGIAILDSDKTLICLRNA +FIGS  RQK
Sbjct: 5   SIVCTKLLCTNAHLGRRVADHHFKVYIRGSRNGIAILDSDKTLICLRNALHFIGSPSRQK 64

Query: 270 GRSFFVNTNSLF-DEITTQMAT 332
           GRSFF+ TN LF  EIT +MA+
Sbjct: 65  GRSFFLKTNHLFIYEITEEMAS 86


>ref|YP_008758150.1| ribosomal protein small subunit 2 (mitochondrion) [Triticum
           timopheevii] gi|549067739|dbj|BAN94711.1| ribosomal
           protein small subunit 2 (mitochondrion) [Triticum
           timopheevii]
          Length = 360

 Score =  121 bits (304), Expect = 9e-26
 Identities = 65/82 (79%), Positives = 69/82 (84%), Gaps = 1/82 (1%)
 Frame = +3

Query: 90  SIVMNKLLSTNAHLGRRVAAHHFKVYICGSRNGIAILDSDKTLICLRNACNFIGSLIRQK 269
           SIV  KLL TNAHLGRRVA HHFKVYI GSRNGIAILDSDKTLICLRNA +FIGS  RQK
Sbjct: 5   SIVCTKLLCTNAHLGRRVADHHFKVYIRGSRNGIAILDSDKTLICLRNALHFIGSPSRQK 64

Query: 270 GRSFFVNTNSLF-DEITTQMAT 332
           GRSFF+ TN LF  EIT +MA+
Sbjct: 65  GRSFFLKTNHLFIYEITEEMAS 86


>ref|YP_398416.1| rps2 [Triticum aestivum] gi|78675256|dbj|BAE47681.1| rps2 [Triticum
           aestivum] gi|169649065|gb|ACA62626.1| rps2 [Triticum
           aestivum]
          Length = 360

 Score =  121 bits (304), Expect = 9e-26
 Identities = 65/82 (79%), Positives = 69/82 (84%), Gaps = 1/82 (1%)
 Frame = +3

Query: 90  SIVMNKLLSTNAHLGRRVAAHHFKVYICGSRNGIAILDSDKTLICLRNACNFIGSLIRQK 269
           SIV  KLL TNAHLGRRVA HHFKVYI GSRNGIAILDSDKTLICLRNA +FIGS  RQK
Sbjct: 5   SIVCTKLLCTNAHLGRRVADHHFKVYIRGSRNGIAILDSDKTLICLRNALHFIGSPSRQK 64

Query: 270 GRSFFVNTNSLF-DEITTQMAT 332
           GRSFF+ TN LF  EIT +MA+
Sbjct: 65  GRSFFLKTNHLFIYEITEEMAS 86


Top